1SGNI

Asn 18 variant of turkey ovomucoid inhibitor third domain complexed with streptomyces griseus proteinase b
Total Genus 12
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
12
sequence length
51
structure length
51
Chain Sequence
VDCSEYPKPACTNEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase/hydrolase inhibitor
molecule keywords Streptogrisin B
publication title Recruitment of a Buried K+ Ion to Stabilize the Negative Charge of Ionized P1 in the Hydrophobic Pocket: Crystal Structures of Glu18, Gln18, Asp18 and Asn18 Variants of Turkey Ovomucoid Inhibitor Third Domain Complexed with Streptomyces griseus Protease B at Various pHs
rcsb
source organism Meleagris gallopavo
total genus 12
structure length 51
sequence length 51
ec nomenclature
pdb deposition date 1999-03-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1sgnI00
4SGBI 3QTLD 1LR8A 1NUBA 2NU4I 2V53A 1CHOI 2JXDA 1PPFI 1SGNI 3B4VC 1SGEI 2KMQA 1Z7KB 5JHWC 4OVOA 1OMUA 1TBRR 1TBQR 2SGQI 1M8CA 1Y1CA 2N17A 1TGSI 2JZMA 1DS2I 2KCXA 1R0RI 2GKVA 1TUSA 4HGUA 2P6AC 2JYYA 1CT0I 2XRCA 1TURA 2QQCA 1Y1BA 1LR7A 1CSOI 2KMPA 1SGYI 2SGPI 1DS3I 2N71A 1UVFA 2KMOA 1N13A 3HH2C 1PCEA 3SGQI 2LEOA 1YTPA 2ARPF 2WCYA 1H0ZA 4GI3C 1HDLA 3TJQA 3OVOA 1YU6C 1LR9A 1UUCA 1IW4A 1SGQI 2NU2I 3SEKC 3SGBI 1CT2I 2GKRI 1OYVI 5DAEA 2NU1I 2NU0I 2ERWA 2QQDA 2M5XA 1CGJI 1MT1A 2SGEI 1UVGA 1SGPI 1CT4I 2SGDI 1CGII 1IY5A 2KMRA 1PJUA 2GKTI 1IY6A 1OMTA 2B0UC 1BUSA 1M8BA 1CE3A 1HJAI 1TIHA 1KMAA 1OVOA 1FYBA 1SGRI 2OVOA 2BUSA 1SGDI 2N52A 1AN1I 2F3CI 2NU3I 1BMOA 2SGFI 1HPTA
chains in the Genus database with same CATH superfamily
4SGBI 1XBTA 3QTLD 3FSYA 1LR8A 3D00A 1NUBA 2RIJA 2NU4I 3RU0A 3UOEA 5J8CA 1PTRA 5FUVA 1TBNA 1V1HA 5E3RA 1K7VA 2V53A 3BJIA 2DIPA 1CHOI 1KBEA 2ENZA 4B6DA 2JXDA 4WP4A 3UFFA 2QPOA 2FNFX 1W4RA 1PPFI 1SGNI 1WKXA 2OU2A 3B4VC 3UGIA 1SGEI 2KMQA 1V1IA 3E59A 1Z7KB 1TOTA 5JHWC 4OVOA 3TO9A 1OMUA 1TBRR 3QAHA 1U5KA 1TBQR 3MEKA 1VDDA 2SGQI 3OXGA 3VDPA 1K7TA 3UEJA 1M8CA 1Y1CA 2E5RA 2N17A 5CCMA 2WGCA 1TGSI 1P9GA 3KY9A 2JZMA 2YQPA 1WGTA 1DS2I 1MJBA 3OXLA 2KCXA 2CJSC 5FUYA 1R0RI 3TO6A 2RC4A 4A24A 3VDUA 2GKVA 1R79A 1TUSA 2OZUA 5EX0A 4L9MA 2ELIA 3OL0A 2L8EA 2B8TA 3E2IA 2W0TA 4HGUA 3FC3A 1S20A 2P6AC 4E1RA 2JYYA 1CT0I 1XX6A 5FUWA 2XRCA 1TURA 2ODDA 3TOBA 3R5BA 3UEYA 2QQCA 1Y1BA 1LR7A 2J9RA 1CSOI 2GIVA 2KMPA 2ORVA 1SGYI 1MJ9A 2SGPI 1DS3I 2N71A 1UVFA 3UGDA 2KMOA 2LB7A 1PTQA 1XA6A 1N13A 3HH2C 1PCEA 3SGQI 4AMLA 2LEOA 1YTPA 1ULMA 1FARA 2ARPF 2YUUA 2WCYA 5EX3A 1H0ZA 3R5DA 5FUXA 3TOAA 1Y8FA 2V1CA 4GI3C 3GOXA 2K9HA 2CWGA 9WGAA 1HDLA 2E73A 3TJQA 5CCLA 2DB6A 2DKVA 3OVOA 4UXIA 1YU6C 2J87A 1LR9A 1UUCA 2ENNA 1IW4A 1SGQI 1Z2IA 2NU2I 2ROWA 1FAQA 3SEKC 1TBOA 1KBFA 3SGBI 1RFHA 1FY7A 1CT2I 1NXUA 4E1PA 2GKRI 1OYVI 2Y0MA 5DAEA 2NU1I 2X3TA 2NU0I 1X4SA 5HI7A 2ERWA 2QQDA 1WGCA 2M5XA 1CGJI 1UHAA 2A20A 4MPIA 1W3SA 2JA1A 4UXHA 5E3QA 1MT1A 3TO7A 2PQ8A 2WVJA 2SGEI 1Q9BA 1SGPI 1CT4I 1UVGA 2SGDI 5J8FA 1CGII 1MJAA 4FKDA 1IY5A 2KMRA 1PJUA 2JW6A 2QQ0A 3VE5A 2N1AB 2GKTI 1IY6A 1OMTA 2B0UC 3UGLA 5HQ8A 1M8BA 1BUSA 1X74A 2VRWB 3R5CA 1CE3A 3FSXA 1HJAI 7WGAA 1TIHA 1HEVA 1KMAA 5E3PA 2CWHA 2GVIA 1OVOA 2ORWA 2LUYA 1FYBA 1SGRI 1ULKA 3CXLA 1ULNA 2CWFA 2OD1A 3QWPA 2OVOA 3PDNA 2QQEA 4DNCA 2BUSA 1SGDI 1P9ZA 1K7UA 1WTJA 2N52A 3OXFA 3R5AA 2X52A 4UXJA 1AN1I 2F3CI 2UZ3A 2L7XA 4JCVE 2V1CC 2NU3I 1BMOA 2UVOA 2SGFI 1HPTA
chains in the Genus database with same CATH topology
4SGBI 1XBTA 3QTLD 1LR8A 3D00A 1NUBA 2NU4I 3RU0A 1PTRA 5FUVA 1TBNA 1V1HA 2V53A 3BJIA 2DIPA 1CHOI 1KBEA 2ENZA 4B6DA 2JXDA 3UFFA 2QPOA 2FNFX 1W4RA 1PPFI 1SGNI 3B4VC 3UGIA 1SGEI 2KMQA 1V1IA 3E59A 1Z7KB 1TOTA 5JHWC 4OVOA 1OMUA 1TBRR 1U5KA 1TBQR 3MEKA 1VDDA 2SGQI 3OXGA 3VDPA 3UEJA 1M8CA 1Y1CA 2E5RA 2N17A 5CCMA 1TGSI 3KY9A 2JZMA 2YQPA 1DS2I 3OXLA 2KCXA 2CJSC 5FUYA 1R0RI 4A24A 3VDUA 2GKVA 1R79A 1TUSA 5EX0A 4L9MA 2ELIA 3OL0A 2L8EA 2B8TA 3E2IA 2W0TA 4HGUA 3FC3A 4E1RA 2P6AC 2JYYA 1CT0I 1XX6A 5FUWA 2XRCA 1TURA 2ODDA 3UEYA 2QQCA 1Y1BA 1LR7A 2J9RA 1CSOI 2KMPA 2ORVA 1SGYI 2SGPI 1DS3I 2N71A 1UVFA 3UGDA 2KMOA 1PTQA 1XA6A 1N13A 3HH2C 1PCEA 3SGQI 2LEOA 1YTPA 2ARPF 1FARA 2YUUA 2WCYA 5EX3A 1H0ZA 5FUXA 1Y8FA 2V1CA 4GI3C 3GOXA 2K9HA 1HDLA 2E73A 3TJQA 5CCLA 2DB6A 3OVOA 4UXIA 1YU6C 2J87A 1LR9A 1UUCA 2ENNA 1IW4A 1SGQI 2NU2I 2ROWA 1FAQA 3SEKC 1TBOA 1KBFA 3SGBI 1RFHA 1CT2I 4E1PA 2GKRI 1OYVI 5DAEA 2NU1I 2NU0I 1X4SA 5HI7A 2ERWA 2QQDA 2M5XA 1CGJI 2A20A 1W3SA 2JA1A 4UXHA 1MT1A 2WVJA 2SGEI 1UVGA 1SGPI 1CT4I 2SGDI 1CGII 4FKDA 1IY5A 2KMRA 1PJUA 2JW6A 2QQ0A 3VE5A 2N1AB 2GKTI 1IY6A 1OMTA 2B0UC 3UGLA 5HQ8A 1M8BA 1BUSA 1X74A 2VRWB 1CE3A 1HJAI 1TIHA 1KMAA 2GVIA 1OVOA 2ORWA 2LUYA 1FYBA 1SGRI 3CXLA 2OD1A 3QWPA 2OVOA 3PDNA 2QQEA 2BUSA 1SGDI 2N52A 3OXFA 4UXJA 1AN1I 2F3CI 2UZ3A 2L7XA 4JCVE 2V1CC 2NU3I 1BMOA 2SGFI 1HPTA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4SGB I;  3QTL D;  1LR8 A;  1NUB A;  2NU4 I;  2V53 A;  1CHO I;  2JXD A;  1PPF I;  1SGN I;  3B4V C;  1SGE I;  2KMQ A;  1Z7K B;  5JHW C;  4OVO A;  1OMU A;  1TBR R;  1TBQ R;  2SGQ I;  1M8C A;  1Y1C A;  2N17 A;  1TGS I;  2JZM A;  1DS2 I;  2KCX A;  1R0R I;  2GKV A;  1TUS A;  4HGU A;  2P6A C;  2JYY A;  1CT0 I;  2XRC A;  1TUR A;  2QQC A;  1Y1B A;  1LR7 A;  1CSO I;  2KMP A;  1SGY I;  2SGP I;  1DS3 I;  2N71 A;  1UVF A;  2KMO A;  1N13 A;  3HH2 C;  1PCE A;  3SGQ I;  2LEO A;  1YTP A;  2ARP F;  2WCY A;  1H0Z A;  4GI3 C;  1HDL A;  3TJQ A;  3OVO A;  1YU6 C;  1LR9 A;  1UUC A;  1IW4 A;  1SGQ I;  2NU2 I;  3SEK C;  3SGB I;  1CT2 I;  2GKR I;  1OYV I;  5DAE A;  2NU1 I;  2NU0 I;  2ERW A;  2QQD A;  2M5X A;  1CGJ I;  1MT1 A;  2SGE I;  1UVG A;  1SGP I;  1CT4 I;  2SGD I;  1CGI I;  1IY5 A;  2KMR A;  1PJU A;  2GKT I;  1IY6 A;  1OMT A;  2B0U C;  1BUS A;  1M8B A;  1CE3 A;  1HJA I;  1TIH A;  1KMA A;  1OVO A;  1FYB A;  1SGR I;  2OVO A;  2BUS A;  1SGD I;  2N52 A;  1AN1 I;  2F3C I;  2NU3 I;  1BMO A;  2SGF I;  1HPT A; 
#chains in the Genus database with same CATH topology
 4SGB I;  1XBT A;  3QTL D;  3FSY A;  1LR8 A;  3D00 A;  1NUB A;  2RIJ A;  2NU4 I;  3RU0 A;  3UOE A;  5J8C A;  1PTR A;  5FUV A;  1TBN A;  1V1H A;  5E3R A;  1K7V A;  2V53 A;  3BJI A;  2DIP A;  1CHO I;  1KBE A;  2ENZ A;  4B6D A;  2JXD A;  4WP4 A;  3UFF A;  2QPO A;  2FNF X;  1W4R A;  1PPF I;  1SGN I;  1WKX A;  2OU2 A;  3B4V C;  3UGI A;  1SGE I;  2KMQ A;  1V1I A;  3E59 A;  1Z7K B;  1TOT A;  5JHW C;  4OVO A;  3TO9 A;  1OMU A;  1TBR R;  3QAH A;  1U5K A;  1TBQ R;  3MEK A;  1VDD A;  2SGQ I;  3OXG A;  3VDP A;  1K7T A;  3UEJ A;  1M8C A;  1Y1C A;  2E5R A;  2N17 A;  5CCM A;  2WGC A;  1TGS I;  1P9G A;  3KY9 A;  2JZM A;  2YQP A;  1WGT A;  1DS2 I;  1MJB A;  3OXL A;  2KCX A;  2CJS C;  5FUY A;  1R0R I;  3TO6 A;  2RC4 A;  4A24 A;  3VDU A;  2GKV A;  1R79 A;  1TUS A;  2OZU A;  5EX0 A;  4L9M A;  2ELI A;  3OL0 A;  2L8E A;  2B8T A;  3E2I A;  2W0T A;  4HGU A;  3FC3 A;  1S20 A;  2P6A C;  4E1R A;  2JYY A;  1CT0 I;  1XX6 A;  5FUW A;  2XRC A;  1TUR A;  2ODD A;  3TOB A;  3R5B A;  3UEY A;  2QQC A;  1Y1B A;  1LR7 A;  2J9R A;  1CSO I;  2GIV A;  2KMP A;  2ORV A;  1SGY I;  1MJ9 A;  2SGP I;  1DS3 I;  2N71 A;  1UVF A;  3UGD A;  2KMO A;  2LB7 A;  1PTQ A;  1XA6 A;  1N13 A;  3HH2 C;  1PCE A;  3SGQ I;  4AML A;  2LEO A;  1YTP A;  1ULM A;  1FAR A;  2ARP F;  2YUU A;  2WCY A;  5EX3 A;  1H0Z A;  3R5D A;  5FUX A;  3TOA A;  1Y8F A;  2V1C A;  4GI3 C;  3GOX A;  2K9H A;  2CWG A;  9WGA A;  1HDL A;  2E73 A;  3TJQ A;  5CCL A;  2DB6 A;  2DKV A;  3OVO A;  4UXI A;  1YU6 C;  2J87 A;  1LR9 A;  1UUC A;  2ENN A;  1IW4 A;  1SGQ I;  1Z2I A;  2NU2 I;  2ROW A;  1FAQ A;  3SEK C;  1TBO A;  1KBF A;  3SGB I;  1RFH A;  1FY7 A;  1CT2 I;  1NXU A;  4E1P A;  2GKR I;  1OYV I;  2Y0M A;  5DAE A;  2NU1 I;  2X3T A;  2NU0 I;  1X4S A;  5HI7 A;  2ERW A;  2QQD A;  1WGC A;  2M5X A;  1CGJ I;  1UHA A;  2A20 A;  4MPI A;  1W3S A;  2JA1 A;  4UXH A;  5E3Q A;  1MT1 A;  3TO7 A;  2PQ8 A;  2WVJ A;  2SGE I;  1Q9B A;  1SGP I;  1CT4 I;  1UVG A;  2SGD I;  5J8F A;  1CGI I;  1MJA A;  4FKD A;  1IY5 A;  2KMR A;  1PJU A;  2JW6 A;  2QQ0 A;  3VE5 A;  2N1A B;  2GKT I;  1IY6 A;  1OMT A;  2B0U C;  3UGL A;  5HQ8 A;  1M8B A;  1BUS A;  1X74 A;  2VRW B;  3R5C A;  1CE3 A;  3FSX A;  1HJA I;  7WGA A;  1TIH A;  1HEV A;  1KMA A;  5E3P A;  2CWH A;  2GVI A;  1OVO A;  2ORW A;  2LUY A;  1FYB A;  1SGR I;  1ULK A;  3CXL A;  1ULN A;  2CWF A;  2OD1 A;  3QWP A;  2OVO A;  3PDN A;  2QQE A;  4DNC A;  2BUS A;  1SGD I;  1P9Z A;  1K7U A;  1WTJ A;  2N52 A;  3OXF A;  3R5A A;  2X52 A;  4UXJ A;  1AN1 I;  2F3C I;  2UZ3 A;  2L7X A;  4JCV E;  2V1C C;  2NU3 I;  1BMO A;  2UVO A;  2SGF I;  1HPT A; 
#chains in the Genus database with same CATH homology
 4SGB I;  1XBT A;  3QTL D;  1LR8 A;  3D00 A;  1NUB A;  2NU4 I;  3RU0 A;  1PTR A;  5FUV A;  1TBN A;  1V1H A;  2V53 A;  3BJI A;  2DIP A;  1CHO I;  1KBE A;  2ENZ A;  4B6D A;  2JXD A;  3UFF A;  2QPO A;  2FNF X;  1W4R A;  1PPF I;  1SGN I;  3B4V C;  3UGI A;  1SGE I;  2KMQ A;  1V1I A;  3E59 A;  1Z7K B;  1TOT A;  5JHW C;  4OVO A;  1OMU A;  1TBR R;  1U5K A;  1TBQ R;  3MEK A;  1VDD A;  2SGQ I;  3OXG A;  3VDP A;  3UEJ A;  1M8C A;  1Y1C A;  2E5R A;  2N17 A;  5CCM A;  1TGS I;  3KY9 A;  2JZM A;  2YQP A;  1DS2 I;  3OXL A;  2KCX A;  2CJS C;  5FUY A;  1R0R I;  4A24 A;  3VDU A;  2GKV A;  1R79 A;  1TUS A;  5EX0 A;  4L9M A;  2ELI A;  3OL0 A;  2L8E A;  2B8T A;  3E2I A;  2W0T A;  4HGU A;  3FC3 A;  4E1R A;  2P6A C;  2JYY A;  1CT0 I;  1XX6 A;  5FUW A;  2XRC A;  1TUR A;  2ODD A;  3UEY A;  2QQC A;  1Y1B A;  1LR7 A;  2J9R A;  1CSO I;  2KMP A;  2ORV A;  1SGY I;  2SGP I;  1DS3 I;  2N71 A;  1UVF A;  3UGD A;  2KMO A;  1PTQ A;  1XA6 A;  1N13 A;  3HH2 C;  1PCE A;  3SGQ I;  2LEO A;  1YTP A;  2ARP F;  1FAR A;  2YUU A;  2WCY A;  5EX3 A;  1H0Z A;  5FUX A;  1Y8F A;  2V1C A;  4GI3 C;  3GOX A;  2K9H A;  1HDL A;  2E73 A;  3TJQ A;  5CCL A;  2DB6 A;  3OVO A;  4UXI A;  1YU6 C;  2J87 A;  1LR9 A;  1UUC A;  2ENN A;  1IW4 A;  1SGQ I;  2NU2 I;  2ROW A;  1FAQ A;  3SEK C;  1TBO A;  1KBF A;  3SGB I;  1RFH A;  1CT2 I;  4E1P A;  2GKR I;  1OYV I;  5DAE A;  2NU1 I;  2NU0 I;  1X4S A;  5HI7 A;  2ERW A;  2QQD A;  2M5X A;  1CGJ I;  2A20 A;  1W3S A;  2JA1 A;  4UXH A;  1MT1 A;  2WVJ A;  2SGE I;  1UVG A;  1SGP I;  1CT4 I;  2SGD I;  1CGI I;  4FKD A;  1IY5 A;  2KMR A;  1PJU A;  2JW6 A;  2QQ0 A;  3VE5 A;  2N1A B;  2GKT I;  1IY6 A;  1OMT A;  2B0U C;  3UGL A;  5HQ8 A;  1M8B A;  1BUS A;  1X74 A;  2VRW B;  1CE3 A;  1HJA I;  1TIH A;  1KMA A;  2GVI A;  1OVO A;  2ORW A;  2LUY A;  1FYB A;  1SGR I;  3CXL A;  2OD1 A;  3QWP A;  2OVO A;  3PDN A;  2QQE A;  2BUS A;  1SGD I;  2N52 A;  3OXF A;  4UXJ A;  1AN1 I;  2F3C I;  2UZ3 A;  2L7X A;  4JCV E;  2V1C C;  2NU3 I;  1BMO A;  2SGF I;  1HPT A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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