1SGNI

Asn 18 variant of turkey ovomucoid inhibitor third domain complexed with streptomyces griseus proteinase b
Total Genus 12
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
12
sequence length
51
structure length
51
Chain Sequence
VDCSEYPKPACTNEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase/hydrolase inhibitor
source organism Meleagris gallopavo
publication title Recruitment of a Buried K+ Ion to Stabilize the Negative Charge of Ionized P1 in the Hydrophobic Pocket: Crystal Structures of Glu18, Gln18, Asp18 and Asn18 Variants of Turkey Ovomucoid Inhibitor Third Domain Complexed with Streptomyces griseus Protease B at Various pHs
rcsb
molecule keywords Streptogrisin B
total genus 12
structure length 51
sequence length 51
ec nomenclature
pdb deposition date 1999-03-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1sgnI00
2M5XA 1SGEI 2OVOA 1LR8A 1IY6A 2JXDA 2B0UC 2KMPA 2SGQI 1LR7A 1YU6C 1IW4A 1CT4I 1DS2I 4HGUA 1CE3A 2SGEI 1CGII 2NU2I 4SGBI 1HJAI 3B4VC 1PPFI 3TJQA 2NU0I 2SGDI 1TIHA 2SGPI 1SGNI 2NU4I 1CT2I 1CT0I 1TUSA 1OVOA 2N52A 2QQCA 1TBRR 2KMQA 2KCXA 2WCYA 2N17A 1HPTA 1OMTA 2KMOA 2KMRA 1CGJI 1CSOI 2ARPF 1OYVI 2NU3I 1Y1BA 2LEOA 2BUSA 1TGSI 2GKRI 1MT1A 1KMAA 2ERWA 3QTLD 1LR9A 1SGDI 1Y1CA 1AN1I 1HDLA 1SGYI 1SGPI 4GI3C 2V53A 3SGQI 5DAEA 2JYYA 1H0ZA 3HH2C 2F3CI 1SGQI 1M8CA 2N71A 3SGBI 1IY5A 2GKTI 2XRCA 1PJUA 4OVOA 1M8BA 1R0RI 2P6AC 1DS3I 5JHWC 1PCEA 1NUBA 1OMUA 1N13A 1SGRI 2GKVA 2NU1I 2SGFI 1TURA 1TBQR 1UVFA 1YTPA 1BMOA 3OVOA 1Z7KB 1UVGA 1CHOI 2QQDA 1UUCA 1BUSA 1FYBA 3SEKC 2JZMA
chains in the Genus database with same CATH superfamily
5EX3A 2M5XA 1SGEI 2E5RA 3D00A 1FARA 2OZUA 4UXJA 4L9MA 1PTRA 2OVOA 1LR8A 4MPIA 1IY6A 2JXDA 2B0UC 2KMPA 2SGQI 1LR7A 1YU6C 1IW4A 1CT4I 1DS2I 1PTQA 1XBTA 1Y8FA 4HGUA 2CWFA 2SGEI 4WP4A 1CGII 4E1RA 1P9ZA 2NU2I 4SGBI 2ROWA 1HJAI 3B4VC 1PPFI 2J87A 2NU0I 2SGDI 1TIHA 2QQ0A 2GIVA 2LB7A 2SGPI 2QPOA 2ODDA 1SGNI 2W0TA 2X3TA 3BJIA 3MEKA 3E2IA 3OXFA 2ORVA 3R5DA 4UXIA 2NU4I 4E1PA 3UGDA 4UXHA 4A24A 1CT2I 1CT0I 3VDPA 1TUSA 2CJSC 5J8CA 3E59A 2V1CA 3TO9A 3VE5A 1OVOA 1ULKA 2N52A 2QQCA 5HQ8A 2DIPA 2QQEA 3QWPA 1TBRR 3TOBA 2B8TA 3FSXA 1K7TA 2KMQA 2KCXA 2WCYA 2N17A 3UOEA 1HPTA 1OMTA 1P9GA 2KMOA 2WVJA 5CCMA 2KMRA 2OD1A 3UFFA 1KBFA 1R79A 1U5KA 2WGCA 3VDUA 2DKVA 2VRWB 3QAHA 3FSYA 1CGJI 1CSOI 2ARPF 1OYVI 1ULNA 2ELIA 2NU3I 1MJBA 1Y1BA 1XX6A 1X74A 3UEYA 2LEOA 2V1CC 2X52A 4B6DA 2BUSA 1TGSI 2N1AB 5HI7A 2UVOA 2GKRI 1VDDA 4AMLA 3CXLA 3FC3A 1MT1A 2J9RA 1KMAA 2ERWA 1S20A 1LR9A 1SGDI 1FY7A 2CWHA 3QTLD 3TJQA 5J8FA 1Q9BA 1Y1CA 1UHAA 1AN1I 1HDLA 1WGCA 4DNCA 1SGYI 3OXGA 3UGIA 5E3RA 3OL0A 1SGPI 1K7VA 4GI3C 2YUUA 2V53A 3TO6A 3TO7A 2PQ8A 1X4SA 3SGQI 3RU0A 2OU2A 2ENZA 2GVIA 3UGLA 5DAEA 2L8EA 2E73A 1TOTA 2JYYA 1FAQA 2CWGA 3HH2C 1H0ZA 1WGTA 2F3CI 1SGQI 1M8CA 2N71A 3OXLA 3SGBI 1IY5A 3R5CA 2GKTI 3R5BA 2XRCA 1PJUA 4OVOA 1M8BA 1R0RI 2P6AC 1DS3I 2L7XA 1W3SA 3KY9A 5JHWC 7WGAA 1PCEA 1RFHA 4FKDA 1NUBA 5EX0A 2ENNA 1OMUA 2K9HA 2RC4A 5CCLA 1N13A 2LUYA 1KBEA 9WGAA 1WTJA 1CE3A 1NXUA 2A20A 5E3PA 4JCVE 3UEJA 1SGRI 2GKVA 2NU1I 1V1HA 1WKXA 2SGFI 5FUWA 1TURA 5FUYA 1TBQR 1K7UA 1UVFA 2FNFX 3GOXA 1YTPA 1ULMA 1Z2IA 1HEVA 1BMOA 1MJ9A 3OVOA 1Z7KB 2UZ3A 5FUVA 1TBNA 1XA6A 3TOAA 2JW6A 1UVGA 2YQPA 1CHOI 3R5AA 1MJAA 1V1IA 2DB6A 2ORWA 1W4RA 3PDNA 2QQDA 1UUCA 5FUXA 5E3QA 1BUSA 1TBOA 2JA1A 2RIJA 1FYBA 2Y0MA 3SEKC 2JZMA
chains in the Genus database with same CATH topology
5EX3A 2M5XA 1SGEI 2E5RA 3D00A 1FARA 4UXJA 4L9MA 1PTRA 2OVOA 1LR8A 1IY6A 2JXDA 2B0UC 2KMPA 2SGQI 1LR7A 1YU6C 1IW4A 1CT4I 1DS2I 1PTQA 1XBTA 1Y8FA 4HGUA 2SGEI 1CE3A 1CGII 4E1RA 2NU2I 4SGBI 2ROWA 1HJAI 3B4VC 1PPFI 2J87A 2NU0I 2SGDI 1TIHA 2QQ0A 3RU0A 2SGPI 2W0TA 2QPOA 2ODDA 1SGNI 3BJIA 3MEKA 3OXFA 4UXIA 3E2IA 4E1PA 2ORVA 5HQ8A 2NU4I 3UGDA 4UXHA 4A24A 1CT2I 1CT0I 3VDPA 1TUSA 2CJSC 3E59A 2V1CA 3VE5A 1OVOA 2N52A 2QQCA 2DIPA 2QQEA 3QWPA 1TBRR 2B8TA 2KMQA 2KCXA 2WCYA 2N17A 1HPTA 1OMTA 2KMOA 2WVJA 5CCMA 2KMRA 2OD1A 3UFFA 1KBFA 1R79A 1U5KA 3VDUA 2VRWB 1CGJI 1CSOI 2ARPF 1OYVI 2ELIA 2NU3I 1Y1BA 1XX6A 1X74A 3UEYA 2LEOA 2V1CC 4B6DA 2BUSA 1TGSI 2N1AB 5HI7A 2GKRI 1VDDA 3CXLA 3FC3A 1MT1A 2J9RA 1KMAA 2ERWA 3QTLD 1LR9A 1SGDI 3TJQA 1Y1CA 1AN1I 1HDLA 1SGYI 3OXGA 3UGIA 3OL0A 1SGPI 4GI3C 2YUUA 2V53A 1X4SA 3SGQI 2ENZA 2GVIA 3UGLA 5DAEA 2L8EA 2E73A 1TOTA 2JYYA 1FAQA 3HH2C 1H0ZA 2F3CI 1SGQI 1M8CA 2N71A 3OXLA 3SGBI 1IY5A 2GKTI 2XRCA 1PJUA 4OVOA 1M8BA 1R0RI 2P6AC 1DS3I 2L7XA 1W3SA 3KY9A 5JHWC 1PCEA 1RFHA 4FKDA 1NUBA 5EX0A 2ENNA 1OMUA 2K9HA 5CCLA 1N13A 2LUYA 1KBEA 2A20A 4JCVE 3UEJA 1SGRI 2GKVA 2NU1I 1V1HA 2SGFI 5FUWA 1TURA 5FUYA 1TBQR 1UVFA 2FNFX 3GOXA 1YTPA 1BMOA 3OVOA 1Z7KB 2UZ3A 5FUVA 1TBNA 1XA6A 2JW6A 1UVGA 2YQPA 1CHOI 1V1IA 2DB6A 2ORWA 1W4RA 3PDNA 2QQDA 1UUCA 5FUXA 1BUSA 1TBOA 2JA1A 1FYBA 3SEKC 2JZMA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2M5X A;  1SGE I;  2OVO A;  1LR8 A;  1IY6 A;  2JXD A;  2B0U C;  2KMP A;  2SGQ I;  1LR7 A;  1YU6 C;  1IW4 A;  1CT4 I;  1DS2 I;  4HGU A;  1CE3 A;  2SGE I;  1CGI I;  2NU2 I;  4SGB I;  1HJA I;  3B4V C;  1PPF I;  3TJQ A;  2NU0 I;  2SGD I;  1TIH A;  2SGP I;  1SGN I;  2NU4 I;  1CT2 I;  1CT0 I;  1TUS A;  1OVO A;  2N52 A;  2QQC A;  1TBR R;  2KMQ A;  2KCX A;  2WCY A;  2N17 A;  1HPT A;  1OMT A;  2KMO A;  2KMR A;  1CGJ I;  1CSO I;  2ARP F;  1OYV I;  2NU3 I;  1Y1B A;  2LEO A;  2BUS A;  1TGS I;  2GKR I;  1MT1 A;  1KMA A;  2ERW A;  3QTL D;  1LR9 A;  1SGD I;  1Y1C A;  1AN1 I;  1HDL A;  1SGY I;  1SGP I;  4GI3 C;  2V53 A;  3SGQ I;  5DAE A;  2JYY A;  1H0Z A;  3HH2 C;  2F3C I;  1SGQ I;  1M8C A;  2N71 A;  3SGB I;  1IY5 A;  2GKT I;  2XRC A;  1PJU A;  4OVO A;  1M8B A;  1R0R I;  2P6A C;  1DS3 I;  5JHW C;  1PCE A;  1NUB A;  1OMU A;  1N13 A;  1SGR I;  2GKV A;  2NU1 I;  2SGF I;  1TUR A;  1TBQ R;  1UVF A;  1YTP A;  1BMO A;  3OVO A;  1Z7K B;  1UVG A;  1CHO I;  2QQD A;  1UUC A;  1BUS A;  1FYB A;  3SEK C;  2JZM A; 
#chains in the Genus database with same CATH topology
 5EX3 A;  2M5X A;  1SGE I;  2E5R A;  3D00 A;  1FAR A;  2OZU A;  4UXJ A;  4L9M A;  1PTR A;  2OVO A;  1LR8 A;  4MPI A;  1IY6 A;  2JXD A;  2B0U C;  2KMP A;  2SGQ I;  1LR7 A;  1YU6 C;  1IW4 A;  1CT4 I;  1DS2 I;  1PTQ A;  1XBT A;  1Y8F A;  4HGU A;  2CWF A;  2SGE I;  4WP4 A;  1CGI I;  4E1R A;  1P9Z A;  2NU2 I;  4SGB I;  2ROW A;  1HJA I;  3B4V C;  1PPF I;  2J87 A;  2NU0 I;  2SGD I;  1TIH A;  2QQ0 A;  2GIV A;  2LB7 A;  2SGP I;  2QPO A;  2ODD A;  1SGN I;  2W0T A;  2X3T A;  3BJI A;  3MEK A;  3E2I A;  3OXF A;  2ORV A;  3R5D A;  4UXI A;  2NU4 I;  4E1P A;  3UGD A;  4UXH A;  4A24 A;  1CT2 I;  1CT0 I;  3VDP A;  1TUS A;  2CJS C;  5J8C A;  3E59 A;  2V1C A;  3TO9 A;  3VE5 A;  1OVO A;  1ULK A;  2N52 A;  2QQC A;  5HQ8 A;  2DIP A;  2QQE A;  3QWP A;  1TBR R;  3TOB A;  2B8T A;  3FSX A;  1K7T A;  2KMQ A;  2KCX A;  2WCY A;  2N17 A;  3UOE A;  1HPT A;  1OMT A;  1P9G A;  2KMO A;  2WVJ A;  5CCM A;  2KMR A;  2OD1 A;  3UFF A;  1KBF A;  1R79 A;  1U5K A;  2WGC A;  3VDU A;  2DKV A;  2VRW B;  3QAH A;  3FSY A;  1CGJ I;  1CSO I;  2ARP F;  1OYV I;  1ULN A;  2ELI A;  2NU3 I;  1MJB A;  1Y1B A;  1XX6 A;  1X74 A;  3UEY A;  2LEO A;  2V1C C;  2X52 A;  4B6D A;  2BUS A;  1TGS I;  2N1A B;  5HI7 A;  2UVO A;  2GKR I;  1VDD A;  4AML A;  3CXL A;  3FC3 A;  1MT1 A;  2J9R A;  1KMA A;  2ERW A;  1S20 A;  1LR9 A;  1SGD I;  1FY7 A;  2CWH A;  3QTL D;  3TJQ A;  5J8F A;  1Q9B A;  1Y1C A;  1UHA A;  1AN1 I;  1HDL A;  1WGC A;  4DNC A;  1SGY I;  3OXG A;  3UGI A;  5E3R A;  3OL0 A;  1SGP I;  1K7V A;  4GI3 C;  2YUU A;  2V53 A;  3TO6 A;  3TO7 A;  2PQ8 A;  1X4S A;  3SGQ I;  3RU0 A;  2OU2 A;  2ENZ A;  2GVI A;  3UGL A;  5DAE A;  2L8E A;  2E73 A;  1TOT A;  2JYY A;  1FAQ A;  2CWG A;  3HH2 C;  1H0Z A;  1WGT A;  2F3C I;  1SGQ I;  1M8C A;  2N71 A;  3OXL A;  3SGB I;  1IY5 A;  3R5C A;  2GKT I;  3R5B A;  2XRC A;  1PJU A;  4OVO A;  1M8B A;  1R0R I;  2P6A C;  1DS3 I;  2L7X A;  1W3S A;  3KY9 A;  5JHW C;  7WGA A;  1PCE A;  1RFH A;  4FKD A;  1NUB A;  5EX0 A;  2ENN A;  1OMU A;  2K9H A;  2RC4 A;  5CCL A;  1N13 A;  2LUY A;  1KBE A;  9WGA A;  1WTJ A;  1CE3 A;  1NXU A;  2A20 A;  5E3P A;  4JCV E;  3UEJ A;  1SGR I;  2GKV A;  2NU1 I;  1V1H A;  1WKX A;  2SGF I;  5FUW A;  1TUR A;  5FUY A;  1TBQ R;  1K7U A;  1UVF A;  2FNF X;  3GOX A;  1YTP A;  1ULM A;  1Z2I A;  1HEV A;  1BMO A;  1MJ9 A;  3OVO A;  1Z7K B;  2UZ3 A;  5FUV A;  1TBN A;  1XA6 A;  3TOA A;  2JW6 A;  1UVG A;  2YQP A;  1CHO I;  3R5A A;  1MJA A;  1V1I A;  2DB6 A;  2ORW A;  1W4R A;  3PDN A;  2QQD A;  1UUC A;  5FUX A;  5E3Q A;  1BUS A;  1TBO A;  2JA1 A;  2RIJ A;  1FYB A;  2Y0M A;  3SEK C;  2JZM A; 
#chains in the Genus database with same CATH homology
 5EX3 A;  2M5X A;  1SGE I;  2E5R A;  3D00 A;  1FAR A;  4UXJ A;  4L9M A;  1PTR A;  2OVO A;  1LR8 A;  1IY6 A;  2JXD A;  2B0U C;  2KMP A;  2SGQ I;  1LR7 A;  1YU6 C;  1IW4 A;  1CT4 I;  1DS2 I;  1PTQ A;  1XBT A;  1Y8F A;  4HGU A;  2SGE I;  1CE3 A;  1CGI I;  4E1R A;  2NU2 I;  4SGB I;  2ROW A;  1HJA I;  3B4V C;  1PPF I;  2J87 A;  2NU0 I;  2SGD I;  1TIH A;  2QQ0 A;  3RU0 A;  2SGP I;  2W0T A;  2QPO A;  2ODD A;  1SGN I;  3BJI A;  3MEK A;  3OXF A;  4UXI A;  3E2I A;  4E1P A;  2ORV A;  5HQ8 A;  2NU4 I;  3UGD A;  4UXH A;  4A24 A;  1CT2 I;  1CT0 I;  3VDP A;  1TUS A;  2CJS C;  3E59 A;  2V1C A;  3VE5 A;  1OVO A;  2N52 A;  2QQC A;  2DIP A;  2QQE A;  3QWP A;  1TBR R;  2B8T A;  2KMQ A;  2KCX A;  2WCY A;  2N17 A;  1HPT A;  1OMT A;  2KMO A;  2WVJ A;  5CCM A;  2KMR A;  2OD1 A;  3UFF A;  1KBF A;  1R79 A;  1U5K A;  3VDU A;  2VRW B;  1CGJ I;  1CSO I;  2ARP F;  1OYV I;  2ELI A;  2NU3 I;  1Y1B A;  1XX6 A;  1X74 A;  3UEY A;  2LEO A;  2V1C C;  4B6D A;  2BUS A;  1TGS I;  2N1A B;  5HI7 A;  2GKR I;  1VDD A;  3CXL A;  3FC3 A;  1MT1 A;  2J9R A;  1KMA A;  2ERW A;  3QTL D;  1LR9 A;  1SGD I;  3TJQ A;  1Y1C A;  1AN1 I;  1HDL A;  1SGY I;  3OXG A;  3UGI A;  3OL0 A;  1SGP I;  4GI3 C;  2YUU A;  2V53 A;  1X4S A;  3SGQ I;  2ENZ A;  2GVI A;  3UGL A;  5DAE A;  2L8E A;  2E73 A;  1TOT A;  2JYY A;  1FAQ A;  3HH2 C;  1H0Z A;  2F3C I;  1SGQ I;  1M8C A;  2N71 A;  3OXL A;  3SGB I;  1IY5 A;  2GKT I;  2XRC A;  1PJU A;  4OVO A;  1M8B A;  1R0R I;  2P6A C;  1DS3 I;  2L7X A;  1W3S A;  3KY9 A;  5JHW C;  1PCE A;  1RFH A;  4FKD A;  1NUB A;  5EX0 A;  2ENN A;  1OMU A;  2K9H A;  5CCL A;  1N13 A;  2LUY A;  1KBE A;  2A20 A;  4JCV E;  3UEJ A;  1SGR I;  2GKV A;  2NU1 I;  1V1H A;  2SGF I;  5FUW A;  1TUR A;  5FUY A;  1TBQ R;  1UVF A;  2FNF X;  3GOX A;  1YTP A;  1BMO A;  3OVO A;  1Z7K B;  2UZ3 A;  5FUV A;  1TBN A;  1XA6 A;  2JW6 A;  1UVG A;  2YQP A;  1CHO I;  1V1I A;  2DB6 A;  2ORW A;  1W4R A;  3PDN A;  2QQD A;  1UUC A;  5FUX A;  1BUS A;  1TBO A;  2JA1 A;  1FYB A;  3SEK C;  2JZM A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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