3SGBI

Structure of the complex of streptomyces griseus protease b and the third domain of the turkey ovomucoid inhibitor at 1.8 angstroms resolution
Total Genus 12
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
12
sequence length
50
structure length
50
Chain Sequence
DCSEYPKPACTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Complex(serine proteinase-inhibitor)
molecule keywords PROTEINASE B (SGPB)
publication title Structure of the complex of Streptomyces griseus protease B and the third domain of the turkey ovomucoid inhibitor at 1.8-A resolution.
pubmed doi rcsb
source organism Streptomyces griseus
total genus 12
structure length 50
sequence length 50
ec nomenclature
pdb deposition date 1983-01-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 3sgbI00
3B4VC 3HH2C 1CSOI 4GI3C 4OVOA 2XRCA 1YU6C 1SGDI 1Y1BA 2N52A 1UVFA 1OMUA 2JXDA 1OVOA 1SGRI 2GKTI 3SGQI 2KCXA 2KMRA 1SGNI 1CGII 2B0UC 1SGEI 2KMOA 1LR7A 1DS2I 1TIHA 4SGBI 2LEOA 1SGPI 1HJAI 2F3CI 1KMAA 2SGFI 4HGUA 1R0RI 3OVOA 1CE3A 3QTLD 1BMOA 1OYVI 2WCYA 1YTPA 2OVOA 1SGQI 2KMQA 2NU1I 1BUSA 1UVGA 2SGEI 2NU0I 1NUBA 1IY5A 1UUCA 1TBQR 1CT4I 1N13A 1SGYI 1CHOI 1TBRR 1CT2I 2ERWA 1MT1A 2ARPF 1Z7KB 1TGSI 1CT0I 1PCEA 1Y1CA 1FYBA 2NU3I 2P6AC 1M8BA 1TURA 1LR9A 2JZMA 2NU4I 1CGJI 2N71A 3TJQA 1PPFI 2SGPI 2M5XA 2V53A 1TUSA 1AN1I 2BUSA 1IY6A 2GKVA 5JHWC 1OMTA 5DAEA 1DS3I 1PJUA 2SGDI 1IW4A 2QQCA 3SEKC 2SGQI 1H0ZA 1HDLA 2KMPA 1LR8A 2NU2I 1HPTA 2JYYA 2GKRI 1M8CA 2N17A 2QQDA 3SGBI
chains in the Genus database with same CATH superfamily
5FUXA 3B4VC 3HH2C 1CSOI 4GI3C 7WGAA 2UVOA 3E59A 2QQEA 2XRCA 4OVOA 3R5AA 1YU6C 4AMLA 1SGDI 3TO9A 1Y1BA 3VE5A 4E1RA 3OL0A 2N52A 1UVFA 1OMUA 2A20A 3OXLA 3RU0A 2CWFA 4DNCA 1K7UA 2JXDA 5FUVA 5HI7A 2X52A 3FC3A 1OVOA 1SGRI 2GKTI 4FKDA 2WGCA 3SGQI 1W3SA 3UGIA 2KCXA 1VDDA 2KMRA 2PQ8A 3OXGA 1SGNI 1CGII 2B0UC 3KY9A 4A24A 1SGEI 2DB6A 1PTRA 2JA1A 2KMOA 1HEVA 1LR7A 1DS2I 1TIHA 4SGBI 1XBTA 1WTJA 2YQPA 1W4RA 1WGCA 2OU2A 3UOEA 2LEOA 1SGPI 1Y8FA 5FUYA 3QWPA 1HJAI 2F3CI 2K9HA 2ENZA 1UHAA 1KMAA 2DIPA 2SGFI 1WGTA 2N1AB 1PTQA 2ORWA 2CWGA 3FSYA 3TO6A 3BJIA 2UZ3A 4HGUA 1FY7A 1R0RI 5CCMA 3OVOA 2RIJA 2DKVA 2X3TA 5E3QA 1CE3A 1K7VA 1U5KA 4L9MA 2QQ0A 3QTLD 1BMOA 2OD1A 1OYVI 2WCYA 1YTPA 2OVOA 2J9RA 3R5BA 1SGQI 2KMQA 1P9GA 2NU1I 2YUUA 1BUSA 1UVGA 2GIVA 2SGEI 2W0TA 5E3PA 2NU0I 1NUBA 1IY5A 1UUCA 1TBQR 1KBFA 1CT4I 5EX0A 3UFFA 1N13A 1SGYI 2GVIA 1CHOI 1V1HA 1TBRR 1CT2I 1V1IA 2V1CA 4JCVE 3QAHA 2ERWA 4UXIA 1MT1A 4WP4A 2ARPF 1MJAA 3PDNA 3E2IA 1ULNA 2CJSC 3FSXA 1Z7KB 5EX3A 1TGSI 3UEJA 3UEYA 1CT0I 1K7TA 1PCEA 1MJBA 1Y1CA 1FYBA 3CXLA 2NU3I 2P6AC 1M8BA 1MJ9A 1TURA 3UGDA 1LR9A 1Q9BA 2JZMA 2V1CC 4MPIA 5E3RA 5J8CA 2JW6A 2ORVA 2OZUA 1TOTA 2NU4I 1CGJI 5HQ8A 2N71A 3TJQA 1PPFI 1TBOA 2SGPI 5FUWA 2VRWB 2M5XA 2ENNA 2LUYA 2V53A 1TUSA 1X74A 2QPOA 2ODDA 2ELIA 2L8EA 1KBEA 2LB7A 3D00A 1P9ZA 1AN1I 2BUSA 4UXJA 2E73A 1IY6A 2GKVA 2RC4A 3TOAA 5CCLA 1RFHA 5J8FA 1OMTA 5JHWC 5DAEA 2E5RA 1DS3I 2CWHA 2Y0MA 1PJUA 1S20A 1FARA 2SGDI 4E1PA 1IW4A 2J87A 2QQCA 1TBNA 3OXFA 3SEKC 2SGQI 2B8TA 3UGLA 3GOXA 1H0ZA 1XA6A 1R79A 1HDLA 1FAQA 2L7XA 2KMPA 3VDPA 1LR8A 1X4SA 1XX6A 2NU2I 4UXHA 4B6DA 1HPTA 3MEKA 1NXUA 3R5CA 1ULKA 2ROWA 2JYYA 9WGAA 3TO7A 1WKXA 1ULMA 3VDUA 2GKRI 1Z2IA 3R5DA 3TOBA 1M8CA 2N17A 2FNFX 2QQDA 2WVJA 3SGBI
chains in the Genus database with same CATH topology
5FUXA 3B4VC 3HH2C 1CSOI 4GI3C 3E59A 2QQEA 2XRCA 4OVOA 1YU6C 1SGDI 3VE5A 1Y1BA 4E1RA 3OL0A 2N52A 1UVFA 1OMUA 2A20A 3OXLA 3RU0A 2JXDA 5HI7A 5FUVA 3FC3A 1OVOA 1SGRI 2GKTI 4FKDA 3SGQI 3UGIA 1W3SA 2KCXA 1VDDA 2KMRA 3OXGA 1SGNI 1CGII 2B0UC 3KY9A 4A24A 1SGEI 2DB6A 1PTRA 2JA1A 2KMOA 1LR7A 1DS2I 1TIHA 4SGBI 1XBTA 2YQPA 1W4RA 2LEOA 1Y8FA 1SGPI 5FUYA 3QWPA 1HJAI 2F3CI 2K9HA 2ENZA 1KMAA 2DIPA 2SGFI 2N1AB 1PTQA 2ORWA 3BJIA 2UZ3A 4HGUA 1R0RI 5CCMA 3OVOA 1CE3A 1U5KA 4L9MA 2QQ0A 3QTLD 1BMOA 2OD1A 1OYVI 2WCYA 1YTPA 2OVOA 2J9RA 1SGQI 2KMQA 2NU1I 2YUUA 1BUSA 1UVGA 2SGEI 2W0TA 2NU0I 1NUBA 1IY5A 1UUCA 1TBQR 1KBFA 1CT4I 5EX0A 3UFFA 1N13A 1SGYI 2GVIA 1CHOI 1V1HA 1TBRR 1CT2I 1V1IA 2V1CA 4JCVE 2ERWA 4UXIA 1MT1A 2ARPF 3PDNA 3E2IA 2CJSC 1Z7KB 5EX3A 1TGSI 3UEJA 3UEYA 1CT0I 1PCEA 1Y1CA 1FYBA 3CXLA 2NU3I 2P6AC 1M8BA 1TURA 3UGDA 1LR9A 2JZMA 2V1CC 2JW6A 2ORVA 1TOTA 2NU4I 1CGJI 5HQ8A 2N71A 3TJQA 1PPFI 1TBOA 2SGPI 5FUWA 2VRWB 2M5XA 2ENNA 2LUYA 2V53A 1TUSA 1X74A 2QPOA 2ODDA 2ELIA 2L8EA 1KBEA 3D00A 1AN1I 2BUSA 4UXJA 2E73A 1IY6A 2GKVA 5CCLA 1RFHA 5JHWC 1OMTA 5DAEA 2E5RA 1DS3I 1PJUA 2SGDI 1FARA 4E1PA 1IW4A 2J87A 2QQCA 1TBNA 3OXFA 3SEKC 2SGQI 2B8TA 3UGLA 3GOXA 1H0ZA 1XA6A 1R79A 1HDLA 1FAQA 2L7XA 2KMPA 3VDPA 1LR8A 1X4SA 1XX6A 2NU2I 4UXHA 4B6DA 1HPTA 3MEKA 2ROWA 2JYYA 3VDUA 2GKRI 1M8CA 2N17A 2FNFX 2QQDA 2WVJA 3SGBI
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3B4V C;  3HH2 C;  1CSO I;  4GI3 C;  4OVO A;  2XRC A;  1YU6 C;  1SGD I;  1Y1B A;  2N52 A;  1UVF A;  1OMU A;  2JXD A;  1OVO A;  1SGR I;  2GKT I;  3SGQ I;  2KCX A;  2KMR A;  1SGN I;  1CGI I;  2B0U C;  1SGE I;  2KMO A;  1LR7 A;  1DS2 I;  1TIH A;  4SGB I;  2LEO A;  1SGP I;  1HJA I;  2F3C I;  1KMA A;  2SGF I;  4HGU A;  1R0R I;  3OVO A;  1CE3 A;  3QTL D;  1BMO A;  1OYV I;  2WCY A;  1YTP A;  2OVO A;  1SGQ I;  2KMQ A;  2NU1 I;  1BUS A;  1UVG A;  2SGE I;  2NU0 I;  1NUB A;  1IY5 A;  1UUC A;  1TBQ R;  1CT4 I;  1N13 A;  1SGY I;  1CHO I;  1TBR R;  1CT2 I;  2ERW A;  1MT1 A;  2ARP F;  1Z7K B;  1TGS I;  1CT0 I;  1PCE A;  1Y1C A;  1FYB A;  2NU3 I;  2P6A C;  1M8B A;  1TUR A;  1LR9 A;  2JZM A;  2NU4 I;  1CGJ I;  2N71 A;  3TJQ A;  1PPF I;  2SGP I;  2M5X A;  2V53 A;  1TUS A;  1AN1 I;  2BUS A;  1IY6 A;  2GKV A;  5JHW C;  1OMT A;  5DAE A;  1DS3 I;  1PJU A;  2SGD I;  1IW4 A;  2QQC A;  3SEK C;  2SGQ I;  1H0Z A;  1HDL A;  2KMP A;  1LR8 A;  2NU2 I;  1HPT A;  2JYY A;  2GKR I;  1M8C A;  2N17 A;  2QQD A;  3SGB I; 
#chains in the Genus database with same CATH topology
 5FUX A;  3B4V C;  3HH2 C;  1CSO I;  4GI3 C;  7WGA A;  2UVO A;  3E59 A;  2QQE A;  2XRC A;  4OVO A;  3R5A A;  1YU6 C;  4AML A;  1SGD I;  3TO9 A;  1Y1B A;  3VE5 A;  4E1R A;  3OL0 A;  2N52 A;  1UVF A;  1OMU A;  2A20 A;  3OXL A;  3RU0 A;  2CWF A;  4DNC A;  1K7U A;  2JXD A;  5FUV A;  5HI7 A;  2X52 A;  3FC3 A;  1OVO A;  1SGR I;  2GKT I;  4FKD A;  2WGC A;  3SGQ I;  1W3S A;  3UGI A;  2KCX A;  1VDD A;  2KMR A;  2PQ8 A;  3OXG A;  1SGN I;  1CGI I;  2B0U C;  3KY9 A;  4A24 A;  1SGE I;  2DB6 A;  1PTR A;  2JA1 A;  2KMO A;  1HEV A;  1LR7 A;  1DS2 I;  1TIH A;  4SGB I;  1XBT A;  1WTJ A;  2YQP A;  1W4R A;  1WGC A;  2OU2 A;  3UOE A;  2LEO A;  1SGP I;  1Y8F A;  5FUY A;  3QWP A;  1HJA I;  2F3C I;  2K9H A;  2ENZ A;  1UHA A;  1KMA A;  2DIP A;  2SGF I;  1WGT A;  2N1A B;  1PTQ A;  2ORW A;  2CWG A;  3FSY A;  3TO6 A;  3BJI A;  2UZ3 A;  4HGU A;  1FY7 A;  1R0R I;  5CCM A;  3OVO A;  2RIJ A;  2DKV A;  2X3T A;  5E3Q A;  1CE3 A;  1K7V A;  1U5K A;  4L9M A;  2QQ0 A;  3QTL D;  1BMO A;  2OD1 A;  1OYV I;  2WCY A;  1YTP A;  2OVO A;  2J9R A;  3R5B A;  1SGQ I;  2KMQ A;  1P9G A;  2NU1 I;  2YUU A;  1BUS A;  1UVG A;  2GIV A;  2SGE I;  2W0T A;  5E3P A;  2NU0 I;  1NUB A;  1IY5 A;  1UUC A;  1TBQ R;  1KBF A;  1CT4 I;  5EX0 A;  3UFF A;  1N13 A;  1SGY I;  2GVI A;  1CHO I;  1V1H A;  1TBR R;  1CT2 I;  1V1I A;  2V1C A;  4JCV E;  3QAH A;  2ERW A;  4UXI A;  1MT1 A;  4WP4 A;  2ARP F;  1MJA A;  3PDN A;  3E2I A;  1ULN A;  2CJS C;  3FSX A;  1Z7K B;  5EX3 A;  1TGS I;  3UEJ A;  3UEY A;  1CT0 I;  1K7T A;  1PCE A;  1MJB A;  1Y1C A;  1FYB A;  3CXL A;  2NU3 I;  2P6A C;  1M8B A;  1MJ9 A;  1TUR A;  3UGD A;  1LR9 A;  1Q9B A;  2JZM A;  2V1C C;  4MPI A;  5E3R A;  5J8C A;  2JW6 A;  2ORV A;  2OZU A;  1TOT A;  2NU4 I;  1CGJ I;  5HQ8 A;  2N71 A;  3TJQ A;  1PPF I;  1TBO A;  2SGP I;  5FUW A;  2VRW B;  2M5X A;  2ENN A;  2LUY A;  2V53 A;  1TUS A;  1X74 A;  2QPO A;  2ODD A;  2ELI A;  2L8E A;  1KBE A;  2LB7 A;  3D00 A;  1P9Z A;  1AN1 I;  2BUS A;  4UXJ A;  2E73 A;  1IY6 A;  2GKV A;  2RC4 A;  3TOA A;  5CCL A;  1RFH A;  5J8F A;  1OMT A;  5JHW C;  5DAE A;  2E5R A;  1DS3 I;  2CWH A;  2Y0M A;  1PJU A;  1S20 A;  1FAR A;  2SGD I;  4E1P A;  1IW4 A;  2J87 A;  2QQC A;  1TBN A;  3OXF A;  3SEK C;  2SGQ I;  2B8T A;  3UGL A;  3GOX A;  1H0Z A;  1XA6 A;  1R79 A;  1HDL A;  1FAQ A;  2L7X A;  2KMP A;  3VDP A;  1LR8 A;  1X4S A;  1XX6 A;  2NU2 I;  4UXH A;  4B6D A;  1HPT A;  3MEK A;  1NXU A;  3R5C A;  1ULK A;  2ROW A;  2JYY A;  9WGA A;  3TO7 A;  1WKX A;  1ULM A;  3VDU A;  2GKR I;  1Z2I A;  3R5D A;  3TOB A;  1M8C A;  2N17 A;  2FNF X;  2QQD A;  2WVJ A;  3SGB I; 
#chains in the Genus database with same CATH homology
 5FUX A;  3B4V C;  3HH2 C;  1CSO I;  4GI3 C;  3E59 A;  2QQE A;  2XRC A;  4OVO A;  1YU6 C;  1SGD I;  3VE5 A;  1Y1B A;  4E1R A;  3OL0 A;  2N52 A;  1UVF A;  1OMU A;  2A20 A;  3OXL A;  3RU0 A;  2JXD A;  5HI7 A;  5FUV A;  3FC3 A;  1OVO A;  1SGR I;  2GKT I;  4FKD A;  3SGQ I;  3UGI A;  1W3S A;  2KCX A;  1VDD A;  2KMR A;  3OXG A;  1SGN I;  1CGI I;  2B0U C;  3KY9 A;  4A24 A;  1SGE I;  2DB6 A;  1PTR A;  2JA1 A;  2KMO A;  1LR7 A;  1DS2 I;  1TIH A;  4SGB I;  1XBT A;  2YQP A;  1W4R A;  2LEO A;  1Y8F A;  1SGP I;  5FUY A;  3QWP A;  1HJA I;  2F3C I;  2K9H A;  2ENZ A;  1KMA A;  2DIP A;  2SGF I;  2N1A B;  1PTQ A;  2ORW A;  3BJI A;  2UZ3 A;  4HGU A;  1R0R I;  5CCM A;  3OVO A;  1CE3 A;  1U5K A;  4L9M A;  2QQ0 A;  3QTL D;  1BMO A;  2OD1 A;  1OYV I;  2WCY A;  1YTP A;  2OVO A;  2J9R A;  1SGQ I;  2KMQ A;  2NU1 I;  2YUU A;  1BUS A;  1UVG A;  2SGE I;  2W0T A;  2NU0 I;  1NUB A;  1IY5 A;  1UUC A;  1TBQ R;  1KBF A;  1CT4 I;  5EX0 A;  3UFF A;  1N13 A;  1SGY I;  2GVI A;  1CHO I;  1V1H A;  1TBR R;  1CT2 I;  1V1I A;  2V1C A;  4JCV E;  2ERW A;  4UXI A;  1MT1 A;  2ARP F;  3PDN A;  3E2I A;  2CJS C;  1Z7K B;  5EX3 A;  1TGS I;  3UEJ A;  3UEY A;  1CT0 I;  1PCE A;  1Y1C A;  1FYB A;  3CXL A;  2NU3 I;  2P6A C;  1M8B A;  1TUR A;  3UGD A;  1LR9 A;  2JZM A;  2V1C C;  2JW6 A;  2ORV A;  1TOT A;  2NU4 I;  1CGJ I;  5HQ8 A;  2N71 A;  3TJQ A;  1PPF I;  1TBO A;  2SGP I;  5FUW A;  2VRW B;  2M5X A;  2ENN A;  2LUY A;  2V53 A;  1TUS A;  1X74 A;  2QPO A;  2ODD A;  2ELI A;  2L8E A;  1KBE A;  3D00 A;  1AN1 I;  2BUS A;  4UXJ A;  2E73 A;  1IY6 A;  2GKV A;  5CCL A;  1RFH A;  5JHW C;  1OMT A;  5DAE A;  2E5R A;  1DS3 I;  1PJU A;  2SGD I;  1FAR A;  4E1P A;  1IW4 A;  2J87 A;  2QQC A;  1TBN A;  3OXF A;  3SEK C;  2SGQ I;  2B8T A;  3UGL A;  3GOX A;  1H0Z A;  1XA6 A;  1R79 A;  1HDL A;  1FAQ A;  2L7X A;  2KMP A;  3VDP A;  1LR8 A;  1X4S A;  1XX6 A;  2NU2 I;  4UXH A;  4B6D A;  1HPT A;  3MEK A;  2ROW A;  2JYY A;  3VDU A;  2GKR I;  1M8C A;  2N17 A;  2FNF X;  2QQD A;  2WVJ A;  3SGB I; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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