3SGBI

Structure of the complex of streptomyces griseus protease b and the third domain of the turkey ovomucoid inhibitor at 1.8 angstroms resolution
Total Genus 12
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
12
sequence length
50
structure length
50
Chain Sequence
b'DCSEYPKPACTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords PROTEINASE B (SGPB)
publication title Structure of the complex of Streptomyces griseus protease B and the third domain of the turkey ovomucoid inhibitor at 1.8-A resolution.
pubmed doi rcsb
source organism Streptomyces griseus
molecule tags Complex(serine proteinase-inhibitor)
total genus 12
structure length 50
sequence length 50
ec nomenclature
pdb deposition date 1983-01-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 3sgbI00
3OVOA 1FYBA 1Z7KB 1CSOI 1TBRR 2QQDA 2OVOA 1CGJI 5DAEA 2N17A 1IY6A 2WCYA 2KCXA 1CT2I 2NU3I 2SGEI 1R0RI 1TUSA 2KMQA 1LR9A 1HJAI 2JXDA 1BUSA 1MT1A 1CT0I 2BUSA 2GKRI 4OVOA 2M5XA 1IW4A 2B0UC 2NU0I 1SGYI 2N52A 2LEOA 1SGNI 2ARPF 1TBQR 2QQCA 2XRCA 1LR8A 1YTPA 3TJQA 4SGBI 2JYYA 1HPTA 2KMPA 1LR7A 1SGRI 1CHOI 1TIHA 3B4VC 1Y1BA 1YU6C 1UVGA 2SGPI 2GKVA 1SGQI 2SGFI 1N13A 1PCEA 2NU4I 1UUCA 5JHWC 4HGUA 1CGII 2JZMA 1M8CA 2KMRA 1TGSI 4GI3C 2NU1I 2NU2I 3QTLD 3SGQI 1NUBA 2GKTI 1DS3I 2P6AC 1PPFI 1H0ZA 1TURA 2F3CI 3SGBI 2V53A 1OMUA 3HH2C 1OVOA 1PJUA 1SGDI 1OYVI 2KMOA 1SGPI 1KMAA 1Y1CA 1M8BA 2SGDI 1CT4I 1AN1I 1SGEI 1BMOA 3SEKC 1OMTA 2SGQI 1CE3A 1DS2I 1IY5A 2ERWA 1UVFA 1HDLA 2N71A
chains in the Genus database with same CATH superfamily
3OVOA 1P9GA 2QQ0A 1ULNA 2RC4A 1FYBA 2OU2A 2CWFA 1Z7KB 2V1CC 1X74A 3R5DA 3TO6A 9WGAA 2B8TA 1R79A 1CSOI 1TBRR 2QQDA 5J8FA 2LUYA 2OVOA 2WGCA 5EX3A 1CGJI 2PQ8A 1K7VA 5DAEA 2VRWB 5FUVA 1V1IA 2N17A 3R5BA 3UEJA 1IY6A 2WCYA 1XA6A 2KCXA 1CT2I 5J8CA 2LB7A 2NU3I 3VDPA 1UHAA 2SGEI 2CWHA 3KY9A 1R0RI 4JCVE 4B6DA 1TUSA 1LR9A 1HJAI 2JXDA 2KMQA 2X3TA 3UGDA 1BUSA 1MT1A 1CT0I 2BUSA 2GIVA 3OXGA 4UXIA 5E3QA 2GKRI 2YQPA 4AMLA 4OVOA 5CCLA 2M5XA 1IW4A 1V1HA 2B0UC 2NU0I 5FUXA 1TBOA 1FARA 5CCMA 2DKVA 2QQEA 3UFFA 1SGYI 2FNFX 2W0TA 2N52A 2LEOA 1SGNI 3RU0A 2ORWA 2WVJA 2ARPF 3OXFA 1TOTA 5FUYA 2OZUA 1S20A 1TBQR 2QQCA 2XRCA 3UGLA 1HEVA 1WKXA 1LR8A 1YTPA 3TJQA 4SGBI 2JYYA 3QAHA 1HPTA 1WTJA 2KMPA 3PDNA 3VE5A 5HQ8A 1LR7A 7WGAA 1SGRI 3TOBA 1NXUA 1CHOI 1TIHA 3FSYA 3FSXA 2K9HA 2YUUA 2E73A 3B4VC 1K7TA 1Y1BA 1XBTA 1UVGA 1YU6C 2DIPA 2N1AB 2SGPI 2UVOA 2GKVA 2QPOA 3QWPA 5HI7A 1KBFA 1ULMA 1SGQI 3GOXA 2RIJA 1Z2IA 1MJAA 2SGFI 1N13A 2J87A 3TO7A 2J9RA 2L7XA 2UZ3A 1PCEA 2OD1A 2NU4I 1Y8FA 4E1RA 3CXLA 1UUCA 4UXHA 1KBEA 5JHWC 4HGUA 5E3PA 1CGII 2JZMA 1MJBA 5FUWA 1M8CA 2KMRA 1TGSI 3FC3A 1TBNA 4WP4A 3E2IA 3E59A 4L9MA 4GI3C 2NU1I 2NU2I 3QTLD 3R5AA 2CJSC 4A24A 1WGTA 3SGQI 1NUBA 3UEYA 2JW6A 3UOEA 1RFHA 1WGCA 1X4SA 2X52A 3MEKA 2DB6A 2GKTI 2ENZA 1DS3I 2P6AC 3D00A 1PTRA 1PPFI 2E5RA 1PTQA 2A20A 2JA1A 3R5CA 1W4RA 1Q9BA 1XX6A 1H0ZA 1TURA 2F3CI 3SGBI 2V53A 3TOAA 3UGIA 1MJ9A 1OMUA 3OXLA 2CWGA 3HH2C 3BJIA 2Y0MA 4MPIA 2V1CA 1OVOA 3TO9A 1P9ZA 5EX0A 4E1PA 1PJUA 1W3SA 1SGDI 1OYVI 5E3RA 2KMOA 1U5KA 2ROWA 1SGPI 1FAQA 1KMAA 1Y1CA 1FY7A 1M8BA 2SGDI 4DNCA 2ODDA 3OL0A 1CT4I 4UXJA 1AN1I 2ELIA 2ORVA 1SGEI 1ULKA 1BMOA 2ENNA 1OMTA 1VDDA 2SGQI 4FKDA 3SEKC 3VDUA 1DS2I 1CE3A 1IY5A 2ERWA 1UVFA 1HDLA 1K7UA 2N71A 2GVIA 2L8EA
chains in the Genus database with same CATH topology
3OVOA 2QQ0A 1FYBA 1Z7KB 2V1CC 1X74A 2B8TA 1R79A 1CSOI 1TBRR 2QQDA 2LUYA 2OVOA 5EX3A 1CGJI 5DAEA 2VRWB 5FUVA 1V1IA 2N17A 3UEJA 1IY6A 2WCYA 1XA6A 2KCXA 1CT2I 2NU3I 3VDPA 2SGEI 3KY9A 4JCVE 1R0RI 4B6DA 1TUSA 1LR9A 1HJAI 2JXDA 2KMQA 3UGDA 1BUSA 1MT1A 1CT0I 2BUSA 3OXGA 4UXIA 2GKRI 2YQPA 4OVOA 5CCLA 2M5XA 1IW4A 1V1HA 2B0UC 2NU0I 5FUXA 1TBOA 1FARA 5CCMA 2QQEA 3UFFA 1SGYI 2FNFX 2W0TA 2N52A 2LEOA 1SGNI 3RU0A 2ORWA 2WVJA 2ARPF 3OXFA 1TOTA 5FUYA 1TBQR 2QQCA 2XRCA 3UGLA 1LR8A 1YTPA 3TJQA 4SGBI 2JYYA 1HPTA 2KMPA 3PDNA 5HQ8A 3VE5A 1LR7A 1SGRI 1CHOI 1TIHA 2K9HA 2YUUA 2E73A 3B4VC 1Y1BA 1XBTA 1UVGA 1YU6C 2DIPA 2N1AB 2SGPI 2GKVA 2QPOA 3QWPA 5HI7A 1KBFA 1SGQI 3GOXA 2SGFI 1N13A 2J87A 2J9RA 2L7XA 2UZ3A 1PCEA 2OD1A 2NU4I 1Y8FA 4E1RA 3CXLA 1UUCA 4UXHA 1KBEA 5JHWC 4HGUA 1CGII 2JZMA 5FUWA 1M8CA 2KMRA 1TGSI 3FC3A 1TBNA 3E2IA 3E59A 4L9MA 4GI3C 2NU1I 2NU2I 3QTLD 2CJSC 4A24A 3SGQI 1NUBA 3UEYA 2JW6A 1RFHA 1X4SA 3MEKA 2DB6A 2GKTI 2ENZA 1DS3I 2P6AC 3D00A 1PTRA 1PPFI 2E5RA 1PTQA 2A20A 2JA1A 1W4RA 1XX6A 1H0ZA 1TURA 2F3CI 3SGBI 2V53A 3UGIA 1OMUA 3OXLA 3HH2C 3BJIA 2V1CA 1OVOA 5EX0A 4E1PA 1PJUA 1W3SA 1SGDI 1OYVI 2KMOA 1U5KA 2ROWA 1SGPI 1FAQA 1KMAA 1Y1CA 1M8BA 2SGDI 2ODDA 3OL0A 1CT4I 4UXJA 1AN1I 2ELIA 2ORVA 1SGEI 4FKDA 1BMOA 3SEKC 1OMTA 1VDDA 2SGQI 3VDUA 1CE3A 1DS2I 1IY5A 2ERWA 1UVFA 1HDLA 2ENNA 2N71A 2GVIA 2L8EA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3OVO A;  1FYB A;  1Z7K B;  1CSO I;  1TBR R;  2QQD A;  2OVO A;  1CGJ I;  5DAE A;  2N17 A;  1IY6 A;  2WCY A;  2KCX A;  1CT2 I;  2NU3 I;  2SGE I;  1R0R I;  1TUS A;  2KMQ A;  1LR9 A;  1HJA I;  2JXD A;  1BUS A;  1MT1 A;  1CT0 I;  2BUS A;  2GKR I;  4OVO A;  2M5X A;  1IW4 A;  2B0U C;  2NU0 I;  1SGY I;  2N52 A;  2LEO A;  1SGN I;  2ARP F;  1TBQ R;  2QQC A;  2XRC A;  1LR8 A;  1YTP A;  3TJQ A;  4SGB I;  2JYY A;  1HPT A;  2KMP A;  1LR7 A;  1SGR I;  1CHO I;  1TIH A;  3B4V C;  1Y1B A;  1YU6 C;  1UVG A;  2SGP I;  2GKV A;  1SGQ I;  2SGF I;  1N13 A;  1PCE A;  2NU4 I;  1UUC A;  5JHW C;  4HGU A;  1CGI I;  2JZM A;  1M8C A;  2KMR A;  1TGS I;  4GI3 C;  2NU1 I;  2NU2 I;  3QTL D;  3SGQ I;  1NUB A;  2GKT I;  1DS3 I;  2P6A C;  1PPF I;  1H0Z A;  1TUR A;  2F3C I;  3SGB I;  2V53 A;  1OMU A;  3HH2 C;  1OVO A;  1PJU A;  1SGD I;  1OYV I;  2KMO A;  1SGP I;  1KMA A;  1Y1C A;  1M8B A;  2SGD I;  1CT4 I;  1AN1 I;  1SGE I;  1BMO A;  3SEK C;  1OMT A;  2SGQ I;  1CE3 A;  1DS2 I;  1IY5 A;  2ERW A;  1UVF A;  1HDL A;  2N71 A; 
#chains in the Genus database with same CATH topology
 3OVO A;  1P9G A;  2QQ0 A;  1ULN A;  2RC4 A;  1FYB A;  2OU2 A;  2CWF A;  1Z7K B;  2V1C C;  1X74 A;  3R5D A;  3TO6 A;  9WGA A;  2B8T A;  1R79 A;  1CSO I;  1TBR R;  2QQD A;  5J8F A;  2LUY A;  2OVO A;  2WGC A;  5EX3 A;  1CGJ I;  2PQ8 A;  1K7V A;  5DAE A;  2VRW B;  5FUV A;  1V1I A;  2N17 A;  3R5B A;  3UEJ A;  1IY6 A;  2WCY A;  1XA6 A;  2KCX A;  1CT2 I;  5J8C A;  2LB7 A;  2NU3 I;  3VDP A;  1UHA A;  2SGE I;  2CWH A;  3KY9 A;  1R0R I;  4JCV E;  4B6D A;  1TUS A;  1LR9 A;  1HJA I;  2JXD A;  2KMQ A;  2X3T A;  3UGD A;  1BUS A;  1MT1 A;  1CT0 I;  2BUS A;  2GIV A;  3OXG A;  4UXI A;  5E3Q A;  2GKR I;  2YQP A;  4AML A;  4OVO A;  5CCL A;  2M5X A;  1IW4 A;  1V1H A;  2B0U C;  2NU0 I;  5FUX A;  1TBO A;  1FAR A;  5CCM A;  2DKV A;  2QQE A;  3UFF A;  1SGY I;  2FNF X;  2W0T A;  2N52 A;  2LEO A;  1SGN I;  3RU0 A;  2ORW A;  2WVJ A;  2ARP F;  3OXF A;  1TOT A;  5FUY A;  2OZU A;  1S20 A;  1TBQ R;  2QQC A;  2XRC A;  3UGL A;  1HEV A;  1WKX A;  1LR8 A;  1YTP A;  3TJQ A;  4SGB I;  2JYY A;  3QAH A;  1HPT A;  1WTJ A;  2KMP A;  3PDN A;  3VE5 A;  5HQ8 A;  1LR7 A;  7WGA A;  1SGR I;  3TOB A;  1NXU A;  1CHO I;  1TIH A;  3FSY A;  3FSX A;  2K9H A;  2YUU A;  2E73 A;  3B4V C;  1K7T A;  1Y1B A;  1XBT A;  1UVG A;  1YU6 C;  2DIP A;  2N1A B;  2SGP I;  2UVO A;  2GKV A;  2QPO A;  3QWP A;  5HI7 A;  1KBF A;  1ULM A;  1SGQ I;  3GOX A;  2RIJ A;  1Z2I A;  1MJA A;  2SGF I;  1N13 A;  2J87 A;  3TO7 A;  2J9R A;  2L7X A;  2UZ3 A;  1PCE A;  2OD1 A;  2NU4 I;  1Y8F A;  4E1R A;  3CXL A;  1UUC A;  4UXH A;  1KBE A;  5JHW C;  4HGU A;  5E3P A;  1CGI I;  2JZM A;  1MJB A;  5FUW A;  1M8C A;  2KMR A;  1TGS I;  3FC3 A;  1TBN A;  4WP4 A;  3E2I A;  3E59 A;  4L9M A;  4GI3 C;  2NU1 I;  2NU2 I;  3QTL D;  3R5A A;  2CJS C;  4A24 A;  1WGT A;  3SGQ I;  1NUB A;  3UEY A;  2JW6 A;  3UOE A;  1RFH A;  1WGC A;  1X4S A;  2X52 A;  3MEK A;  2DB6 A;  2GKT I;  2ENZ A;  1DS3 I;  2P6A C;  3D00 A;  1PTR A;  1PPF I;  2E5R A;  1PTQ A;  2A20 A;  2JA1 A;  3R5C A;  1W4R A;  1Q9B A;  1XX6 A;  1H0Z A;  1TUR A;  2F3C I;  3SGB I;  2V53 A;  3TOA A;  3UGI A;  1MJ9 A;  1OMU A;  3OXL A;  2CWG A;  3HH2 C;  3BJI A;  2Y0M A;  4MPI A;  2V1C A;  1OVO A;  3TO9 A;  1P9Z A;  5EX0 A;  4E1P A;  1PJU A;  1W3S A;  1SGD I;  1OYV I;  5E3R A;  2KMO A;  1U5K A;  2ROW A;  1SGP I;  1FAQ A;  1KMA A;  1Y1C A;  1FY7 A;  1M8B A;  2SGD I;  4DNC A;  2ODD A;  3OL0 A;  1CT4 I;  4UXJ A;  1AN1 I;  2ELI A;  2ORV A;  1SGE I;  1ULK A;  1BMO A;  2ENN A;  1OMT A;  1VDD A;  2SGQ I;  4FKD A;  3SEK C;  3VDU A;  1DS2 I;  1CE3 A;  1IY5 A;  2ERW A;  1UVF A;  1HDL A;  1K7U A;  2N71 A;  2GVI A;  2L8E A; 
#chains in the Genus database with same CATH homology
 3OVO A;  2QQ0 A;  1FYB A;  1Z7K B;  2V1C C;  1X74 A;  2B8T A;  1R79 A;  1CSO I;  1TBR R;  2QQD A;  2LUY A;  2OVO A;  5EX3 A;  1CGJ I;  5DAE A;  2VRW B;  5FUV A;  1V1I A;  2N17 A;  3UEJ A;  1IY6 A;  2WCY A;  1XA6 A;  2KCX A;  1CT2 I;  2NU3 I;  3VDP A;  2SGE I;  3KY9 A;  4JCV E;  1R0R I;  4B6D A;  1TUS A;  1LR9 A;  1HJA I;  2JXD A;  2KMQ A;  3UGD A;  1BUS A;  1MT1 A;  1CT0 I;  2BUS A;  3OXG A;  4UXI A;  2GKR I;  2YQP A;  4OVO A;  5CCL A;  2M5X A;  1IW4 A;  1V1H A;  2B0U C;  2NU0 I;  5FUX A;  1TBO A;  1FAR A;  5CCM A;  2QQE A;  3UFF A;  1SGY I;  2FNF X;  2W0T A;  2N52 A;  2LEO A;  1SGN I;  3RU0 A;  2ORW A;  2WVJ A;  2ARP F;  3OXF A;  1TOT A;  5FUY A;  1TBQ R;  2QQC A;  2XRC A;  3UGL A;  1LR8 A;  1YTP A;  3TJQ A;  4SGB I;  2JYY A;  1HPT A;  2KMP A;  3PDN A;  5HQ8 A;  3VE5 A;  1LR7 A;  1SGR I;  1CHO I;  1TIH A;  2K9H A;  2YUU A;  2E73 A;  3B4V C;  1Y1B A;  1XBT A;  1UVG A;  1YU6 C;  2DIP A;  2N1A B;  2SGP I;  2GKV A;  2QPO A;  3QWP A;  5HI7 A;  1KBF A;  1SGQ I;  3GOX A;  2SGF I;  1N13 A;  2J87 A;  2J9R A;  2L7X A;  2UZ3 A;  1PCE A;  2OD1 A;  2NU4 I;  1Y8F A;  4E1R A;  3CXL A;  1UUC A;  4UXH A;  1KBE A;  5JHW C;  4HGU A;  1CGI I;  2JZM A;  5FUW A;  1M8C A;  2KMR A;  1TGS I;  3FC3 A;  1TBN A;  3E2I A;  3E59 A;  4L9M A;  4GI3 C;  2NU1 I;  2NU2 I;  3QTL D;  2CJS C;  4A24 A;  3SGQ I;  1NUB A;  3UEY A;  2JW6 A;  1RFH A;  1X4S A;  3MEK A;  2DB6 A;  2GKT I;  2ENZ A;  1DS3 I;  2P6A C;  3D00 A;  1PTR A;  1PPF I;  2E5R A;  1PTQ A;  2A20 A;  2JA1 A;  1W4R A;  1XX6 A;  1H0Z A;  1TUR A;  2F3C I;  3SGB I;  2V53 A;  3UGI A;  1OMU A;  3OXL A;  3HH2 C;  3BJI A;  2V1C A;  1OVO A;  5EX0 A;  4E1P A;  1PJU A;  1W3S A;  1SGD I;  1OYV I;  2KMO A;  1U5K A;  2ROW A;  1SGP I;  1FAQ A;  1KMA A;  1Y1C A;  1M8B A;  2SGD I;  2ODD A;  3OL0 A;  1CT4 I;  4UXJ A;  1AN1 I;  2ELI A;  2ORV A;  1SGE I;  4FKD A;  1BMO A;  3SEK C;  1OMT A;  1VDD A;  2SGQ I;  3VDU A;  1CE3 A;  1DS2 I;  1IY5 A;  2ERW A;  1UVF A;  1HDL A;  2ENN A;  2N71 A;  2GVI A;  2L8E A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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