7WGAA

2.2 angstroms resolution structure analysis of two refined n-acetylneuraminyllactose-wheat germ agglutinin isolectin complexes
Total Genus 42
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
42
sequence length
171
structure length
171
Chain Sequence
ERCGEQGSNMECPNNLCCSQYGYCGMGGDYCGKGCQNGACWTSKRCGSQAGGATCTNNQCCSQYGYCGFGAEYCGAGCQGGPCRADIKCGSQAGGKLCPNNLCCSQWGFCGLGSEFCGGGCQSGACSTDKPCGKDAGGRVCTNNYCCSKWGSCGIGPGYCGAGCQSGGCDG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords WHEAT GERM LECTIN
publication title 2.2 A resolution structure analysis of two refined N-acetylneuraminyl-lactose--wheat germ agglutinin isolectin complexes.
pubmed doi rcsb
source organism Triticum aestivum
molecule tags Lectin (agglutinin)
total genus 42
structure length 171
sequence length 171
chains with identical sequence B
ec nomenclature
pdb deposition date 1990-04-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00187 Chitin_bind_1 Chitin recognition protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 7wgaA04
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 7wgaA02
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 7wgaA03
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 7wgaA01
1P9ZA 1P9GA 1Q9BA 1K7VA 1HEVA 1ULNA 2CWGA 2LB7A 1K7TA 2X3TA 4WP4A 7WGAA 1WGTA 2DKVA 4AMLA 1WKXA 1K7UA 2WGCA 1WGCA 2X52A 2UVOA 4MPIA 1UHAA 1ULMA 9WGAA 1ULKA
chains in the Genus database with same CATH superfamily
3OXLA 2YQPA 1Q9BA 1TBNA 4GI3C 4E1RA 2ENNA 4DNCA 3VE5A 4FKDA 1HPTA 4UXJA 2SGEI 2M5XA 1FYBA 5DAEA 1V1IA 1PCEA 1UVFA 1FARA 2CWGA 3OL0A 2LB7A 5JHWC 5E3QA 2GKTI 1XA6A 2CWHA 3CXLA 2RIJA 1KMAA 1LR9A 3R5BA 5CCLA 1N13A 1CE3A 1TGSI 1NXUA 2E5RA 1TUSA 2ARPF 1CSOI 2OD1A 2ERWA 2GKVA 3MEKA 1SGEI 2N71A 1SGYI 3QAHA 2CWFA 2VRWB 2Y0MA 1YU6C 2JYYA 4E1PA 2LUYA 2J9RA 1TURA 2XRCA 3E2IA 1FY7A 3KY9A 5J8CA 5EX3A 4A24A 1P9ZA 1P9GA 2OZUA 2NU0I 1TBRR 2B8TA 2SGPI 2V1CC 3R5AA 1UVGA 1PTQA 1MJ9A 1K7VA 1SGQI 2ORVA 2W0TA 2F3CI 4UXHA 3UEJA 1V1HA 3UGIA 1BUSA 2K9HA 1HEVA 1VDDA 2FNFX 2GVIA 5EX0A 1SGNI 5FUVA 5FUYA 1OVOA 1Y1CA 2GKRI 2QQ0A 4SGBI 3UEYA 2V1CA 1TIHA 1K7TA 1XX6A 2DB6A 4WP4A 7WGAA 2SGQI 1TBOA 2DKVA 1CGII 2JXDA 1X4SA 1WKXA 2PQ8A 2QPOA 1BMOA 1K7UA 1LR8A 5HI7A 2WGCA 1S20A 2ENZA 2LEOA 3FSYA 3QWPA 3TO6A 2SGFI 1DS2I 1KBFA 2RC4A 2V53A 1YTPA 2GIVA 2P6AC 3D00A 1HDLA 1PPFI 1MJAA 1CHOI 3FC3A 1ULMA 3BJIA 9WGAA 1FAQA 1OMUA 2L7XA 3PDNA 1CT0I 2KMPA 1MJBA 2CJSC 3TO7A 2KMOA 2WVJA 3TOBA 1IY5A 1H0ZA 3GOXA 3VDPA 1PTRA 2B0UC 2NU1I 4HGUA 2KMRA 1Y1BA 1Z7KB 1SGDI 1KBEA 1OMTA 3OXGA 1W4RA 2BUSA 2OU2A 4AMLA 4JCVE 1R79A 2KCXA 3FSXA 3OVOA 3TO9A 3B4VC 1WTJA 2QQEA 1CGJI 2YUUA 2DIPA 1IW4A 1TOTA 2ORWA 1M8CA 1NUBA 3QTLD 3SEKC 3VDUA 1IY6A 1UHAA 3SGQI 2N17A 3UGDA 1OYVI 2JA1A 1PJUA 1R0RI 2N52A 2ROWA 1DS3I 1UUCA 3RU0A 5J8FA 3OXFA 1TBQR 2JZMA 1Z2IA 1X74A 1AN1I 1ULNA 1M8BA 3UFFA 2SGDI 4B6DA 1CT2I 2NU3I 5FUXA 3E59A 2N1AB 1RFHA 1HJAI 2J87A 1SGRI 3R5DA 2X3TA 2E73A 1WGTA 3UOEA 2UZ3A 4OVOA 5CCMA 2JW6A 2KMQA 1SGPI 2A20A 3R5CA 1Y8FA 1U5KA 2NU2I 2L8EA 3HH2C 1WGCA 1MT1A 2ODDA 2ELIA 4L9MA 1W3SA 1XBTA 4UXIA 2X52A 3TOAA 2UVOA 1LR7A 3TJQA 2QQDA 5E3RA 5FUWA 5HQ8A 4MPIA 3SGBI 1CT4I 5E3PA 3UGLA 2WCYA 2QQCA 2OVOA 2NU4I 1ULKA
chains in the Genus database with same CATH topology
1P9ZA 1P9GA 1Q9BA 1K7VA 1HEVA 1ULNA 2CWGA 2LB7A 1K7TA 2X3TA 4WP4A 7WGAA 1WGTA 2DKVA 4AMLA 1WKXA 1K7UA 2WGCA 1WGCA 2X52A 2UVOA 4MPIA 1UHAA 1ULMA 9WGAA 1ULKA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1P9Z A;  1P9G A;  1Q9B A;  1K7V A;  1HEV A;  1ULN A;  2CWG A;  2LB7 A;  1K7T A;  2X3T A;  4WP4 A;  7WGA A;  1WGT A;  2DKV A;  4AML A;  1WKX A;  1K7U A;  2WGC A;  1WGC A;  2X52 A;  2UVO A;  4MPI A;  1UHA A;  1ULM A;  9WGA A;  1ULK A; 
#chains in the Genus database with same CATH topology
 3OXL A;  2YQP A;  1Q9B A;  1TBN A;  4GI3 C;  4E1R A;  2ENN A;  4DNC A;  3VE5 A;  4FKD A;  1HPT A;  4UXJ A;  2SGE I;  2M5X A;  1FYB A;  5DAE A;  1V1I A;  1PCE A;  1UVF A;  1FAR A;  2CWG A;  3OL0 A;  2LB7 A;  5JHW C;  5E3Q A;  2GKT I;  1XA6 A;  2CWH A;  3CXL A;  2RIJ A;  1KMA A;  1LR9 A;  3R5B A;  5CCL A;  1N13 A;  1CE3 A;  1TGS I;  1NXU A;  2E5R A;  1TUS A;  2ARP F;  1CSO I;  2OD1 A;  2ERW A;  2GKV A;  3MEK A;  1SGE I;  2N71 A;  1SGY I;  3QAH A;  2CWF A;  2VRW B;  2Y0M A;  1YU6 C;  2JYY A;  4E1P A;  2LUY A;  2J9R A;  1TUR A;  2XRC A;  3E2I A;  1FY7 A;  3KY9 A;  5J8C A;  5EX3 A;  4A24 A;  1P9Z A;  1P9G A;  2OZU A;  2NU0 I;  1TBR R;  2B8T A;  2SGP I;  2V1C C;  3R5A A;  1UVG A;  1PTQ A;  1MJ9 A;  1K7V A;  1SGQ I;  2ORV A;  2W0T A;  2F3C I;  4UXH A;  3UEJ A;  1V1H A;  3UGI A;  1BUS A;  2K9H A;  1HEV A;  1VDD A;  2FNF X;  2GVI A;  5EX0 A;  1SGN I;  5FUV A;  5FUY A;  1OVO A;  1Y1C A;  2GKR I;  2QQ0 A;  4SGB I;  3UEY A;  2V1C A;  1TIH A;  1K7T A;  1XX6 A;  2DB6 A;  4WP4 A;  7WGA A;  2SGQ I;  1TBO A;  2DKV A;  1CGI I;  2JXD A;  1X4S A;  1WKX A;  2PQ8 A;  2QPO A;  1BMO A;  1K7U A;  1LR8 A;  5HI7 A;  2WGC A;  1S20 A;  2ENZ A;  2LEO A;  3FSY A;  3QWP A;  3TO6 A;  2SGF I;  1DS2 I;  1KBF A;  2RC4 A;  2V53 A;  1YTP A;  2GIV A;  2P6A C;  3D00 A;  1HDL A;  1PPF I;  1MJA A;  1CHO I;  3FC3 A;  1ULM A;  3BJI A;  9WGA A;  1FAQ A;  1OMU A;  2L7X A;  3PDN A;  1CT0 I;  2KMP A;  1MJB A;  2CJS C;  3TO7 A;  2KMO A;  2WVJ A;  3TOB A;  1IY5 A;  1H0Z A;  3GOX A;  3VDP A;  1PTR A;  2B0U C;  2NU1 I;  4HGU A;  2KMR A;  1Y1B A;  1Z7K B;  1SGD I;  1KBE A;  1OMT A;  3OXG A;  1W4R A;  2BUS A;  2OU2 A;  4AML A;  4JCV E;  1R79 A;  2KCX A;  3FSX A;  3OVO A;  3TO9 A;  3B4V C;  1WTJ A;  2QQE A;  1CGJ I;  2YUU A;  2DIP A;  1IW4 A;  1TOT A;  2ORW A;  1M8C A;  1NUB A;  3QTL D;  3SEK C;  3VDU A;  1IY6 A;  1UHA A;  3SGQ I;  2N17 A;  3UGD A;  1OYV I;  2JA1 A;  1PJU A;  1R0R I;  2N52 A;  2ROW A;  1DS3 I;  1UUC A;  3RU0 A;  5J8F A;  3OXF A;  1TBQ R;  2JZM A;  1Z2I A;  1X74 A;  1AN1 I;  1ULN A;  1M8B A;  3UFF A;  2SGD I;  4B6D A;  1CT2 I;  2NU3 I;  5FUX A;  3E59 A;  2N1A B;  1RFH A;  1HJA I;  2J87 A;  1SGR I;  3R5D A;  2X3T A;  2E73 A;  1WGT A;  3UOE A;  2UZ3 A;  4OVO A;  5CCM A;  2JW6 A;  2KMQ A;  1SGP I;  2A20 A;  3R5C A;  1Y8F A;  1U5K A;  2NU2 I;  2L8E A;  3HH2 C;  1WGC A;  1MT1 A;  2ODD A;  2ELI A;  4L9M A;  1W3S A;  1XBT A;  4UXI A;  2X52 A;  3TOA A;  2UVO A;  1LR7 A;  3TJQ A;  2QQD A;  5E3R A;  5FUW A;  5HQ8 A;  4MPI A;  3SGB I;  1CT4 I;  5E3P A;  3UGL A;  2WCY A;  2QQC A;  2OVO A;  2NU4 I;  1ULK A; 
#chains in the Genus database with same CATH homology
 1P9Z A;  1P9G A;  1Q9B A;  1K7V A;  1HEV A;  1ULN A;  2CWG A;  2LB7 A;  1K7T A;  2X3T A;  4WP4 A;  7WGA A;  1WGT A;  2DKV A;  4AML A;  1WKX A;  1K7U A;  2WGC A;  1WGC A;  2X52 A;  2UVO A;  4MPI A;  1UHA A;  1ULM A;  9WGA A;  1ULK A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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