2JYYA

Solution structure of c8a/c37a-t1 from nicotiana alata
Total Genus 11
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
11
sequence length
53
structure length
53
Chain Sequence
b'DRICTNCAAGTKGCKYFSDDGTFVCEGESDPRNPKAAPRNCDPRIAYGICPLA'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords Proteinase inhibitor
publication title Selective removal of individual disulfide bonds in the Nicotiana alata proteinase inhibitor T1 reveals different stabilisation of the reactive site loop
rcsb
source organism Nicotiana alata
molecule tags Hydrolase inhibitor
total genus 11
structure length 53
sequence length 53
ec nomenclature
pdb deposition date 2007-12-20
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 2jyyA00
2F3CI 1R0RI 2ERWA 1H0ZA 2NU3I 2P6AC 2KMRA 2JYYA 1UVFA 4HGUA 3SEKC 2B0UC 2XRCA 1CSOI 1IW4A 1M8BA 1M8CA 1Y1BA 2ARPF 2N52A 1CT4I 5JHWC 2GKVA 1TURA 1SGQI 2QQCA 2QQDA 3HH2C 2KMOA 2N71A 1SGPI 2N17A 3OVOA 2WCYA 1UVGA 3B4VC 3SGQI 1YTPA 1TUSA 4OVOA 1LR8A 1HPTA 2LEOA 1SGDI 1UUCA 2SGFI 1HDLA 2SGQI 1N13A 1AN1I 3QTLD 2SGEI 2M5XA 1DS2I 1OYVI 1SGEI 1TIHA 1BUSA 2KMPA 1SGRI 5DAEA 1TGSI 1TBQR 1CHOI 1CGJI 4GI3C 1CT2I 2BUSA 2NU1I 1LR7A 1IY6A 1LR9A 2GKTI 1BMOA 2SGDI 1OVOA 1PJUA 2JXDA 3SGBI 3TJQA 2NU2I 2NU4I 2KMQA 2KCXA 2OVOA 1Y1CA 2SGPI 1OMTA 1TBRR 1MT1A 2V53A 1PCEA 1NUBA 2NU0I 1OMUA 1HJAI 1FYBA 1SGNI 1CT0I 2JZMA 1Z7KB 1PPFI 1SGYI 4SGBI 1DS3I 1IY5A 1KMAA 1CE3A 1CGII 1YU6C 2GKRI
chains in the Genus database with same CATH superfamily
5E3RA 3CXLA 1R79A 2F3CI 1R0RI 2ERWA 4L9MA 5FUXA 3UEJA 4A24A 1FAQA 2NU3I 1H0ZA 2P6AC 1P9ZA 1X4SA 2KMRA 2WGCA 2JYYA 4JCVE 2L8EA 1UVFA 2OU2A 2YQPA 3R5BA 1Z2IA 2CWHA 4HGUA 3SEKC 2B0UC 2XRCA 3UGIA 2B8TA 1PTRA 5FUWA 1CSOI 2ORWA 5J8CA 1M8BA 1M8CA 1IW4A 2K9HA 2RC4A 1Y1BA 3FSXA 5HI7A 3R5CA 2ARPF 4E1RA 2N52A 1CT4I 1MJBA 2E5RA 3R5AA 4FKDA 3VE5A 2PQ8A 4DNCA 5JHWC 1P9GA 3TO6A 2GKVA 1TURA 1WKXA 1SGQI 1W3SA 2V1CC 3FSYA 1V1IA 2QQCA 2QQDA 1XX6A 3HH2C 2CWGA 2KMOA 2N71A 4UXIA 4UXJA 4AMLA 1SGPI 2N17A 3OVOA 2YUUA 5E3PA 1ULNA 2WCYA 2L7XA 3UOEA 1UVGA 3UEYA 1WTJA 1XA6A 3B4VC 1U5KA 3SGQI 2E73A 1YTPA 1TUSA 1KBEA 2GVIA 1LR8A 4OVOA 1NXUA 1HPTA 2LEOA 2QQEA 2QPOA 2ODDA 1MJAA 2J9RA 1HEVA 2OD1A 4B6DA 3TOAA 3OXFA 2RIJA 1SGDI 1UUCA 2CWFA 2SGFI 5HQ8A 1HDLA 2SGQI 2WVJA 1N13A 1AN1I 1TOTA 2SGEI 1DS2I 1OYVI 2M5XA 2V1CA 3QTLD 3UFFA 1SGEI 1TIHA 1W4RA 2ORVA 2JW6A 2KMPA 1SGRI 2VRWB 5DAEA 2W0TA 1BUSA 9WGAA 2CJSC 1TGSI 3TO9A 1TBQR 1KBFA 1CHOI 1CGJI 1ULMA 4GI3C 1CT2I 3KY9A 1ULKA 2DB6A 1VDDA 5FUYA 3UGLA 1TBOA 2BUSA 3OXLA 2UZ3A 3E2IA 4UXHA 3GOXA 2NU1I 1LR7A 2GIVA 1K7UA 1RFHA 2OZUA 2DIPA 1IY6A 1LR9A 2GKTI 3QAHA 2A20A 5CCMA 1BMOA 2DKVA 2J87A 2SGDI 3PDNA 1OVOA 1K7TA 1PJUA 2JA1A 2JXDA 2QQ0A 1UHAA 3SGBI 3TJQA 1WGTA 2NU2I 2LUYA 2KMQA 2NU4I 3E59A 3OXGA 2KCXA 3VDUA 2OVOA 1Y1CA 2SGPI 1OMTA 1MJ9A 4WP4A 2N1AB 7WGAA 1XBTA 2X52A 3VDPA 1TBRR 2Y0MA 1K7VA 1MT1A 2ELIA 1Q9BA 2V53A 1PCEA 2ROWA 5E3QA 1NUBA 1Y8FA 2NU0I 1OMUA 2X3TA 3QWPA 1HJAI 3UGDA 1FYBA 1FARA 1V1HA 3D00A 4E1PA 1WGCA 1FY7A 1TBNA 1X74A 5CCLA 3R5DA 1SGNI 1CT0I 1S20A 5FUVA 2JZMA 4MPIA 1Z7KB 3FC3A 1PPFI 2LB7A 3OL0A 5J8FA 3RU0A 1SGYI 2UVOA 3MEKA 2ENZA 5EX3A 1PTQA 4SGBI 1DS3I 2ENNA 1IY5A 3BJIA 2FNFX 5EX0A 1KMAA 1CE3A 1CGII 1YU6C 3TOBA 2GKRI 3TO7A
chains in the Genus database with same CATH topology
3CXLA 1R79A 2F3CI 1R0RI 2ERWA 4L9MA 5FUXA 3UEJA 4A24A 1FAQA 2NU3I 1H0ZA 2P6AC 1X4SA 2KMRA 2JYYA 4JCVE 2L8EA 1UVFA 2YQPA 4HGUA 3SEKC 2B0UC 2XRCA 3UGIA 2B8TA 1PTRA 5FUWA 1CSOI 2ORWA 1IW4A 1M8BA 1M8CA 2K9HA 1Y1BA 5HI7A 2ARPF 4E1RA 2N52A 1CT4I 4FKDA 2E5RA 3VE5A 5JHWC 2GKVA 1TURA 1SGQI 1W3SA 2V1CC 1V1IA 2QQCA 2QQDA 1XX6A 3HH2C 4UXIA 2KMOA 2N71A 4UXJA 1SGPI 2N17A 3OVOA 2YUUA 2WCYA 2L7XA 1UVGA 3UEYA 1XA6A 3B4VC 1U5KA 3SGQI 2E73A 1YTPA 1TUSA 1KBEA 2GVIA 1LR8A 4OVOA 1HPTA 2LEOA 2QQEA 2QPOA 2ODDA 2J9RA 2OD1A 4B6DA 3OXFA 1SGDI 1UUCA 2SGFI 1HDLA 5HQ8A 2SGQI 2WVJA 1N13A 1AN1I 1TOTA 2SGEI 1DS2I 1OYVI 2M5XA 2V1CA 3QTLD 3UFFA 1SGEI 1TIHA 1W4RA 2ORVA 2JW6A 2KMPA 1SGRI 2VRWB 5DAEA 2W0TA 1BUSA 2CJSC 1TGSI 1TBQR 1KBFA 1CHOI 1CGJI 4GI3C 1CT2I 3KY9A 2DB6A 1VDDA 5FUYA 3UGLA 1TBOA 2BUSA 3OXLA 2UZ3A 3E2IA 4UXHA 3GOXA 2NU1I 1LR7A 1RFHA 2DIPA 1IY6A 1LR9A 2GKTI 2A20A 1BMOA 2J87A 3PDNA 2SGDI 1OVOA 1PJUA 2JA1A 2JXDA 2QQ0A 3SGBI 3TJQA 5CCMA 2NU2I 2LUYA 2KMQA 2NU4I 3E59A 3OXGA 2KCXA 3VDUA 2OVOA 1Y1CA 2SGPI 1OMTA 2N1AB 1XBTA 3VDPA 1TBRR 1MT1A 2ELIA 2V53A 1PCEA 2ROWA 1NUBA 1Y8FA 2NU0I 1OMUA 3QWPA 1HJAI 3UGDA 1FYBA 1FARA 1V1HA 3D00A 4E1PA 1X74A 5CCLA 1TBNA 1SGNI 1CT0I 5FUVA 2JZMA 1Z7KB 3FC3A 1PPFI 3OL0A 3RU0A 1SGYI 3MEKA 2ENZA 5EX3A 1PTQA 4SGBI 1DS3I 2ENNA 1IY5A 3BJIA 2FNFX 5EX0A 1KMAA 1CE3A 1CGII 1YU6C 2GKRI
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2F3C I;  1R0R I;  2ERW A;  1H0Z A;  2NU3 I;  2P6A C;  2KMR A;  2JYY A;  1UVF A;  4HGU A;  3SEK C;  2B0U C;  2XRC A;  1CSO I;  1IW4 A;  1M8B A;  1M8C A;  1Y1B A;  2ARP F;  2N52 A;  1CT4 I;  5JHW C;  2GKV A;  1TUR A;  1SGQ I;  2QQC A;  2QQD A;  3HH2 C;  2KMO A;  2N71 A;  1SGP I;  2N17 A;  3OVO A;  2WCY A;  1UVG A;  3B4V C;  3SGQ I;  1YTP A;  1TUS A;  4OVO A;  1LR8 A;  1HPT A;  2LEO A;  1SGD I;  1UUC A;  2SGF I;  1HDL A;  2SGQ I;  1N13 A;  1AN1 I;  3QTL D;  2SGE I;  2M5X A;  1DS2 I;  1OYV I;  1SGE I;  1TIH A;  1BUS A;  2KMP A;  1SGR I;  5DAE A;  1TGS I;  1TBQ R;  1CHO I;  1CGJ I;  4GI3 C;  1CT2 I;  2BUS A;  2NU1 I;  1LR7 A;  1IY6 A;  1LR9 A;  2GKT I;  1BMO A;  2SGD I;  1OVO A;  1PJU A;  2JXD A;  3SGB I;  3TJQ A;  2NU2 I;  2NU4 I;  2KMQ A;  2KCX A;  2OVO A;  1Y1C A;  2SGP I;  1OMT A;  1TBR R;  1MT1 A;  2V53 A;  1PCE A;  1NUB A;  2NU0 I;  1OMU A;  1HJA I;  1FYB A;  1SGN I;  1CT0 I;  2JZM A;  1Z7K B;  1PPF I;  1SGY I;  4SGB I;  1DS3 I;  1IY5 A;  1KMA A;  1CE3 A;  1CGI I;  1YU6 C;  2GKR I; 
#chains in the Genus database with same CATH topology
 5E3R A;  3CXL A;  1R79 A;  2F3C I;  1R0R I;  2ERW A;  4L9M A;  5FUX A;  3UEJ A;  4A24 A;  1FAQ A;  2NU3 I;  1H0Z A;  2P6A C;  1P9Z A;  1X4S A;  2KMR A;  2WGC A;  2JYY A;  4JCV E;  2L8E A;  1UVF A;  2OU2 A;  2YQP A;  3R5B A;  1Z2I A;  2CWH A;  4HGU A;  3SEK C;  2B0U C;  2XRC A;  3UGI A;  2B8T A;  1PTR A;  5FUW A;  1CSO I;  2ORW A;  5J8C A;  1M8B A;  1M8C A;  1IW4 A;  2K9H A;  2RC4 A;  1Y1B A;  3FSX A;  5HI7 A;  3R5C A;  2ARP F;  4E1R A;  2N52 A;  1CT4 I;  1MJB A;  2E5R A;  3R5A A;  4FKD A;  3VE5 A;  2PQ8 A;  4DNC A;  5JHW C;  1P9G A;  3TO6 A;  2GKV A;  1TUR A;  1WKX A;  1SGQ I;  1W3S A;  2V1C C;  3FSY A;  1V1I A;  2QQC A;  2QQD A;  1XX6 A;  3HH2 C;  2CWG A;  2KMO A;  2N71 A;  4UXI A;  4UXJ A;  4AML A;  1SGP I;  2N17 A;  3OVO A;  2YUU A;  5E3P A;  1ULN A;  2WCY A;  2L7X A;  3UOE A;  1UVG A;  3UEY A;  1WTJ A;  1XA6 A;  3B4V C;  1U5K A;  3SGQ I;  2E73 A;  1YTP A;  1TUS A;  1KBE A;  2GVI A;  1LR8 A;  4OVO A;  1NXU A;  1HPT A;  2LEO A;  2QQE A;  2QPO A;  2ODD A;  1MJA A;  2J9R A;  1HEV A;  2OD1 A;  4B6D A;  3TOA A;  3OXF A;  2RIJ A;  1SGD I;  1UUC A;  2CWF A;  2SGF I;  5HQ8 A;  1HDL A;  2SGQ I;  2WVJ A;  1N13 A;  1AN1 I;  1TOT A;  2SGE I;  1DS2 I;  1OYV I;  2M5X A;  2V1C A;  3QTL D;  3UFF A;  1SGE I;  1TIH A;  1W4R A;  2ORV A;  2JW6 A;  2KMP A;  1SGR I;  2VRW B;  5DAE A;  2W0T A;  1BUS A;  9WGA A;  2CJS C;  1TGS I;  3TO9 A;  1TBQ R;  1KBF A;  1CHO I;  1CGJ I;  1ULM A;  4GI3 C;  1CT2 I;  3KY9 A;  1ULK A;  2DB6 A;  1VDD A;  5FUY A;  3UGL A;  1TBO A;  2BUS A;  3OXL A;  2UZ3 A;  3E2I A;  4UXH A;  3GOX A;  2NU1 I;  1LR7 A;  2GIV A;  1K7U A;  1RFH A;  2OZU A;  2DIP A;  1IY6 A;  1LR9 A;  2GKT I;  3QAH A;  2A20 A;  5CCM A;  1BMO A;  2DKV A;  2J87 A;  2SGD I;  3PDN A;  1OVO A;  1K7T A;  1PJU A;  2JA1 A;  2JXD A;  2QQ0 A;  1UHA A;  3SGB I;  3TJQ A;  1WGT A;  2NU2 I;  2LUY A;  2KMQ A;  2NU4 I;  3E59 A;  3OXG A;  2KCX A;  3VDU A;  2OVO A;  1Y1C A;  2SGP I;  1OMT A;  1MJ9 A;  4WP4 A;  2N1A B;  7WGA A;  1XBT A;  2X52 A;  3VDP A;  1TBR R;  2Y0M A;  1K7V A;  1MT1 A;  2ELI A;  1Q9B A;  2V53 A;  1PCE A;  2ROW A;  5E3Q A;  1NUB A;  1Y8F A;  2NU0 I;  1OMU A;  2X3T A;  3QWP A;  1HJA I;  3UGD A;  1FYB A;  1FAR A;  1V1H A;  3D00 A;  4E1P A;  1WGC A;  1FY7 A;  1TBN A;  1X74 A;  5CCL A;  3R5D A;  1SGN I;  1CT0 I;  1S20 A;  5FUV A;  2JZM A;  4MPI A;  1Z7K B;  3FC3 A;  1PPF I;  2LB7 A;  3OL0 A;  5J8F A;  3RU0 A;  1SGY I;  2UVO A;  3MEK A;  2ENZ A;  5EX3 A;  1PTQ A;  4SGB I;  1DS3 I;  2ENN A;  1IY5 A;  3BJI A;  2FNF X;  5EX0 A;  1KMA A;  1CE3 A;  1CGI I;  1YU6 C;  3TOB A;  2GKR I;  3TO7 A; 
#chains in the Genus database with same CATH homology
 3CXL A;  1R79 A;  2F3C I;  1R0R I;  2ERW A;  4L9M A;  5FUX A;  3UEJ A;  4A24 A;  1FAQ A;  2NU3 I;  1H0Z A;  2P6A C;  1X4S A;  2KMR A;  2JYY A;  4JCV E;  2L8E A;  1UVF A;  2YQP A;  4HGU A;  3SEK C;  2B0U C;  2XRC A;  3UGI A;  2B8T A;  1PTR A;  5FUW A;  1CSO I;  2ORW A;  1IW4 A;  1M8B A;  1M8C A;  2K9H A;  1Y1B A;  5HI7 A;  2ARP F;  4E1R A;  2N52 A;  1CT4 I;  4FKD A;  2E5R A;  3VE5 A;  5JHW C;  2GKV A;  1TUR A;  1SGQ I;  1W3S A;  2V1C C;  1V1I A;  2QQC A;  2QQD A;  1XX6 A;  3HH2 C;  4UXI A;  2KMO A;  2N71 A;  4UXJ A;  1SGP I;  2N17 A;  3OVO A;  2YUU A;  2WCY A;  2L7X A;  1UVG A;  3UEY A;  1XA6 A;  3B4V C;  1U5K A;  3SGQ I;  2E73 A;  1YTP A;  1TUS A;  1KBE A;  2GVI A;  1LR8 A;  4OVO A;  1HPT A;  2LEO A;  2QQE A;  2QPO A;  2ODD A;  2J9R A;  2OD1 A;  4B6D A;  3OXF A;  1SGD I;  1UUC A;  2SGF I;  1HDL A;  5HQ8 A;  2SGQ I;  2WVJ A;  1N13 A;  1AN1 I;  1TOT A;  2SGE I;  1DS2 I;  1OYV I;  2M5X A;  2V1C A;  3QTL D;  3UFF A;  1SGE I;  1TIH A;  1W4R A;  2ORV A;  2JW6 A;  2KMP A;  1SGR I;  2VRW B;  5DAE A;  2W0T A;  1BUS A;  2CJS C;  1TGS I;  1TBQ R;  1KBF A;  1CHO I;  1CGJ I;  4GI3 C;  1CT2 I;  3KY9 A;  2DB6 A;  1VDD A;  5FUY A;  3UGL A;  1TBO A;  2BUS A;  3OXL A;  2UZ3 A;  3E2I A;  4UXH A;  3GOX A;  2NU1 I;  1LR7 A;  1RFH A;  2DIP A;  1IY6 A;  1LR9 A;  2GKT I;  2A20 A;  1BMO A;  2J87 A;  3PDN A;  2SGD I;  1OVO A;  1PJU A;  2JA1 A;  2JXD A;  2QQ0 A;  3SGB I;  3TJQ A;  5CCM A;  2NU2 I;  2LUY A;  2KMQ A;  2NU4 I;  3E59 A;  3OXG A;  2KCX A;  3VDU A;  2OVO A;  1Y1C A;  2SGP I;  1OMT A;  2N1A B;  1XBT A;  3VDP A;  1TBR R;  1MT1 A;  2ELI A;  2V53 A;  1PCE A;  2ROW A;  1NUB A;  1Y8F A;  2NU0 I;  1OMU A;  3QWP A;  1HJA I;  3UGD A;  1FYB A;  1FAR A;  1V1H A;  3D00 A;  4E1P A;  1X74 A;  5CCL A;  1TBN A;  1SGN I;  1CT0 I;  5FUV A;  2JZM A;  1Z7K B;  3FC3 A;  1PPF I;  3OL0 A;  3RU0 A;  1SGY I;  3MEK A;  2ENZ A;  5EX3 A;  1PTQ A;  4SGB I;  1DS3 I;  2ENN A;  1IY5 A;  3BJI A;  2FNF X;  5EX0 A;  1KMA A;  1CE3 A;  1CGI I;  1YU6 C;  2GKR I; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...