1TBNA

Nmr structure of a protein kinase c-g phorbol-binding domain, minimized average structure
Total Genus 6
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
6
sequence length
66
structure length
66
Chain Sequence
QTDDPRNKHKFRLHSYSSPTFCDHCGSLLYGLVHQGMKCSCCEMNVHRRCVRSVPSLCGVDHTERR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Calcium-binding protein
source organism Rattus rattus
publication title NMR structure of a protein kinase C-gamma phorbol-binding domain and study of protein-lipid micelle interactions.
pubmed doi rcsb
molecule keywords PROTEIN KINASE C, GAMMA TYPE
total genus 6
structure length 66
sequence length 66
ec nomenclature ec 2.7.11.13: Protein kinase C.
pdb deposition date 1997-04-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00130 C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.20 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1tbnA00
4UXHA 3UFFA 1KBEA 2J87A 2JA1A 4B6DA 4FKDA 3UEYA 1FARA 1PTQA 2UZ3A 3E2IA 1XBTA 1RFHA 2DB6A 1Y8FA 5FUXA 2ELIA 2VRWB 3KY9A 2ORVA 2QQEA 1TBOA 1R79A 2QPOA 4UXJA 2ORWA 3UGLA 2QQ0A 1W4RA 3UGIA 2E73A 2WVJA 4L9MA 4UXIA 5FUYA 1KBFA 3UEJA 2FNFX 1XX6A 1XA6A 2GVIA 2J9RA 5FUVA 2ENZA 1TBNA 3BJIA 2YUUA 1FAQA 1PTRA 2B8TA 5FUWA 2ROWA 3UGDA 2ENNA 3CXLA
chains in the Genus database with same CATH superfamily
2YQPA 3R5CA 2K9HA 1IW4A 2QQCA 2JA1A 3R5AA 1MJBA 2JYYA 1FARA 2NU1I 4FKDA 1TUSA 3SGBI 3TO6A 1PTQA 2L7XA 2N17A 4DNCA 2A20A 4OVOA 2JW6A 1SGDI 5J8CA 1X4SA 1Y8FA 2V1CA 1SGNI 1K7TA 1ULMA 2ELIA 2M5XA 1CT4I 2NU3I 2Y0MA 2N71A 4E1RA 5CCLA 2DKVA 1TOTA 1FYBA 1WKXA 1K7VA 2DIPA 2CWGA 1UVGA 2N52A 2NU4I 5E3RA 9WGAA 2QQ0A 1W4RA 2KMOA 1KBFA 4UXIA 1SGPI 1TBQR 2X3TA 2W0TA 1V1HA 4B6DA 1BMOA 3FSYA 5CCMA 3GOXA 1ULNA 1Z7KB 2OZUA 1CHOI 1NUBA 2ENZA 1CGJI 1FAQA 1MJAA 1NXUA 3TJQA 1U5KA 1PTRA 2B8TA 5FUWA 7WGAA 3UGDA 2ENNA 1OYVI 1DS2I 1MJ9A 1IY5A 4UXHA 3UFFA 4HGUA 4JCVE 3VDUA 1WGCA 1N13A 1BUSA 1HPTA 2WGCA 2XRCA 4SGBI 5EX3A 3RU0A 3SEKC 1OMUA 1TIHA 3KY9A 2GIVA 3MEKA 2LUYA 3PDNA 2BUSA 3VE5A 1R0RI 2V1CC 3TO9A 2JZMA 2V53A 2ORWA 4UXJA 1H0ZA 1LR8A 1M8CA 1PCEA 2E73A 2WVJA 2KMQA 1PJUA 5FUYA 1PPFI 1CT2I 3SGQI 3OXGA 2FNFX 1XA6A 2J9RA 2ODDA 3TOAA 1Q9BA 3BJIA 1TBNA 1W3SA 3UEYA 1M8BA 5EX0A 3OXFA 2ARPF 2B0UC 3OVOA 3D00A 3TO7A 4AMLA 2KMRA 3E2IA 4MPIA 1HDLA 1RFHA 5HQ8A 2PQ8A 5HI7A 2DB6A 5FUXA 1VDDA 5E3PA 2OU2A 1WTJA 2SGFI 1DS3I 1S20A 2GKTI 3R5BA 3R5DA 2ORVA 2QQEA 2GKRI 1UUCA 1TBOA 1OMTA 1R79A 1V1IA 2QPOA 1Y1CA 3HH2C 2E5RA 1LR9A 5E3QA 1CT0I 1CSOI 1FY7A 1UHAA 3UGIA 4L9MA 2NU2I 2P6AC 3QWPA 1TBRR 4GI3C 3UEJA 1XX6A 2GVIA 5FUVA 3TOBA 1IY6A 2CWFA 1HEVA 2NU0I 2YUUA 2CWHA 2CJSC 2WCYA 2F3CI 2SGEI 2UVOA 3OXLA 2ROWA 4WP4A 3E59A 1KBEA 2J87A 1YU6C 2RIJA 1CE3A 2OD1A 1WGTA 2UZ3A 1XBTA 2RC4A 2L8EA 1LR7A 1MT1A 1OVOA 1SGEI 1SGRI 1X74A 2SGDI 2KCXA 3FC3A 1TGSI 2ERWA 2VRWB 2LEOA 2KMPA 1ULKA 1UVFA 2OVOA 2SGPI 3B4VC 3UOEA 4E1PA 4A24A 2N1AB 2SGQI 1AN1I 1CGII 1P9GA 2QQDA 3FSXA 3UGLA 1TURA 2GKVA 1HJAI 5J8FA 2X52A 3QAHA 1Z2IA 2JXDA 5DAEA 1YTPA 1KMAA 1SGQI 2LB7A 3OL0A 3VDPA 1Y1BA 1SGYI 1P9ZA 5JHWC 3QTLD 1K7UA 3CXLA
chains in the Genus database with same CATH topology
2YQPA 2K9HA 1IW4A 2QQCA 2JA1A 4B6DA 4FKDA 2JYYA 1FARA 2NU1I 3UEYA 1TUSA 1PTQA 2L7XA 2N17A 2A20A 4OVOA 2JW6A 1SGDI 1X4SA 1Y8FA 2V1CA 1SGNI 2M5XA 2ELIA 2NU3I 5FUXA 1CT4I 3SGBI 4E1RA 2N71A 5CCLA 1TOTA 1FYBA 2DIPA 2N52A 1UVGA 2NU4I 2QQ0A 1W4RA 2KMOA 1KBFA 4UXIA 1SGPI 1TBQR 2W0TA 1V1HA 1BMOA 5CCMA 3GOXA 1Z7KB 1CHOI 1NUBA 2ENZA 1CGJI 1FAQA 3TJQA 1U5KA 1PTRA 2B8TA 5FUWA 3UGDA 2ENNA 1OYVI 1DS2I 1IY5A 4UXHA 3UFFA 4HGUA 4JCVE 3VDUA 1N13A 1BUSA 1HPTA 2XRCA 4SGBI 5EX3A 3RU0A 3SEKC 1OMUA 1TIHA 3KY9A 3MEKA 2LUYA 3PDNA 2BUSA 3VE5A 1R0RI 2V1CC 1H0ZA 2JZMA 2V53A 2ORWA 4UXJA 1LR8A 1M8CA 1PCEA 2E73A 2WVJA 2KMQA 1PJUA 5FUYA 1PPFI 1CT2I 3SGQI 3OXGA 2FNFX 1XA6A 2J9RA 2ODDA 3BJIA 1TBNA 1W3SA 1M8BA 5EX0A 3OXFA 2ARPF 2B0UC 3OVOA 3D00A 2KMRA 3E2IA 1HDLA 1RFHA 5HQ8A 5HI7A 2DB6A 1VDDA 2SGFI 1DS3I 2GKTI 2ORVA 2QQEA 2GKRI 1UUCA 1TBOA 1OMTA 1R79A 1V1IA 2QPOA 1Y1CA 3HH2C 2E5RA 1LR9A 1CT0I 1CSOI 3UGIA 4L9MA 2NU2I 2P6AC 3QWPA 1TBRR 4GI3C 3UEJA 1XX6A 2GVIA 5FUVA 1IY6A 2NU0I 2YUUA 2CJSC 2WCYA 2F3CI 2SGEI 3OXLA 2ROWA 3E59A 1KBEA 2J87A 1YU6C 1CE3A 2OD1A 2UZ3A 1XBTA 2L8EA 1LR7A 1MT1A 1OVOA 1SGEI 1SGRI 1X74A 2SGDI 2KCXA 3FC3A 1TGSI 2ERWA 2VRWB 2LEOA 2KMPA 1UVFA 2OVOA 2SGPI 3B4VC 4E1PA 4A24A 2N1AB 2SGQI 1AN1I 1CGII 2QQDA 3UGLA 1TURA 2GKVA 1HJAI 2JXDA 5DAEA 1YTPA 1KMAA 1SGQI 3OL0A 3VDPA 1Y1BA 1SGYI 5JHWC 3QTLD 3CXLA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4UXH A;  3UFF A;  1KBE A;  2J87 A;  2JA1 A;  4B6D A;  4FKD A;  3UEY A;  1FAR A;  1PTQ A;  2UZ3 A;  3E2I A;  1XBT A;  1RFH A;  2DB6 A;  1Y8F A;  5FUX A;  2ELI A;  2VRW B;  3KY9 A;  2ORV A;  2QQE A;  1TBO A;  1R79 A;  2QPO A;  4UXJ A;  2ORW A;  3UGL A;  2QQ0 A;  1W4R A;  3UGI A;  2E73 A;  2WVJ A;  4L9M A;  4UXI A;  5FUY A;  1KBF A;  3UEJ A;  2FNF X;  1XX6 A;  1XA6 A;  2GVI A;  2J9R A;  5FUV A;  2ENZ A;  1TBN A;  3BJI A;  2YUU A;  1FAQ A;  1PTR A;  2B8T A;  5FUW A;  2ROW A;  3UGD A;  2ENN A;  3CXL A; 
#chains in the Genus database with same CATH topology
 2YQP A;  3R5C A;  2K9H A;  1IW4 A;  2QQC A;  2JA1 A;  3R5A A;  1MJB A;  2JYY A;  1FAR A;  2NU1 I;  4FKD A;  1TUS A;  3SGB I;  3TO6 A;  1PTQ A;  2L7X A;  2N17 A;  4DNC A;  2A20 A;  4OVO A;  2JW6 A;  1SGD I;  5J8C A;  1X4S A;  1Y8F A;  2V1C A;  1SGN I;  1K7T A;  1ULM A;  2ELI A;  2M5X A;  1CT4 I;  2NU3 I;  2Y0M A;  2N71 A;  4E1R A;  5CCL A;  2DKV A;  1TOT A;  1FYB A;  1WKX A;  1K7V A;  2DIP A;  2CWG A;  1UVG A;  2N52 A;  2NU4 I;  5E3R A;  9WGA A;  2QQ0 A;  1W4R A;  2KMO A;  1KBF A;  4UXI A;  1SGP I;  1TBQ R;  2X3T A;  2W0T A;  1V1H A;  4B6D A;  1BMO A;  3FSY A;  5CCM A;  3GOX A;  1ULN A;  1Z7K B;  2OZU A;  1CHO I;  1NUB A;  2ENZ A;  1CGJ I;  1FAQ A;  1MJA A;  1NXU A;  3TJQ A;  1U5K A;  1PTR A;  2B8T A;  5FUW A;  7WGA A;  3UGD A;  2ENN A;  1OYV I;  1DS2 I;  1MJ9 A;  1IY5 A;  4UXH A;  3UFF A;  4HGU A;  4JCV E;  3VDU A;  1WGC A;  1N13 A;  1BUS A;  1HPT A;  2WGC A;  2XRC A;  4SGB I;  5EX3 A;  3RU0 A;  3SEK C;  1OMU A;  1TIH A;  3KY9 A;  2GIV A;  3MEK A;  2LUY A;  3PDN A;  2BUS A;  3VE5 A;  1R0R I;  2V1C C;  3TO9 A;  2JZM A;  2V53 A;  2ORW A;  4UXJ A;  1H0Z A;  1LR8 A;  1M8C A;  1PCE A;  2E73 A;  2WVJ A;  2KMQ A;  1PJU A;  5FUY A;  1PPF I;  1CT2 I;  3SGQ I;  3OXG A;  2FNF X;  1XA6 A;  2J9R A;  2ODD A;  3TOA A;  1Q9B A;  3BJI A;  1TBN A;  1W3S A;  3UEY A;  1M8B A;  5EX0 A;  3OXF A;  2ARP F;  2B0U C;  3OVO A;  3D00 A;  3TO7 A;  4AML A;  2KMR A;  3E2I A;  4MPI A;  1HDL A;  1RFH A;  5HQ8 A;  2PQ8 A;  5HI7 A;  2DB6 A;  5FUX A;  1VDD A;  5E3P A;  2OU2 A;  1WTJ A;  2SGF I;  1DS3 I;  1S20 A;  2GKT I;  3R5B A;  3R5D A;  2ORV A;  2QQE A;  2GKR I;  1UUC A;  1TBO A;  1OMT A;  1R79 A;  1V1I A;  2QPO A;  1Y1C A;  3HH2 C;  2E5R A;  1LR9 A;  5E3Q A;  1CT0 I;  1CSO I;  1FY7 A;  1UHA A;  3UGI A;  4L9M A;  2NU2 I;  2P6A C;  3QWP A;  1TBR R;  4GI3 C;  3UEJ A;  1XX6 A;  2GVI A;  5FUV A;  3TOB A;  1IY6 A;  2CWF A;  1HEV A;  2NU0 I;  2YUU A;  2CWH A;  2CJS C;  2WCY A;  2F3C I;  2SGE I;  2UVO A;  3OXL A;  2ROW A;  4WP4 A;  3E59 A;  1KBE A;  2J87 A;  1YU6 C;  2RIJ A;  1CE3 A;  2OD1 A;  1WGT A;  2UZ3 A;  1XBT A;  2RC4 A;  2L8E A;  1LR7 A;  1MT1 A;  1OVO A;  1SGE I;  1SGR I;  1X74 A;  2SGD I;  2KCX A;  3FC3 A;  1TGS I;  2ERW A;  2VRW B;  2LEO A;  2KMP A;  1ULK A;  1UVF A;  2OVO A;  2SGP I;  3B4V C;  3UOE A;  4E1P A;  4A24 A;  2N1A B;  2SGQ I;  1AN1 I;  1CGI I;  1P9G A;  2QQD A;  3FSX A;  3UGL A;  1TUR A;  2GKV A;  1HJA I;  5J8F A;  2X52 A;  3QAH A;  1Z2I A;  2JXD A;  5DAE A;  1YTP A;  1KMA A;  1SGQ I;  2LB7 A;  3OL0 A;  3VDP A;  1Y1B A;  1SGY I;  1P9Z A;  5JHW C;  3QTL D;  1K7U A;  3CXL A; 
#chains in the Genus database with same CATH homology
 2YQP A;  2K9H A;  1IW4 A;  2QQC A;  2JA1 A;  4B6D A;  4FKD A;  2JYY A;  1FAR A;  2NU1 I;  3UEY A;  1TUS A;  1PTQ A;  2L7X A;  2N17 A;  2A20 A;  4OVO A;  2JW6 A;  1SGD I;  1X4S A;  1Y8F A;  2V1C A;  1SGN I;  2M5X A;  2ELI A;  2NU3 I;  5FUX A;  1CT4 I;  3SGB I;  4E1R A;  2N71 A;  5CCL A;  1TOT A;  1FYB A;  2DIP A;  2N52 A;  1UVG A;  2NU4 I;  2QQ0 A;  1W4R A;  2KMO A;  1KBF A;  4UXI A;  1SGP I;  1TBQ R;  2W0T A;  1V1H A;  1BMO A;  5CCM A;  3GOX A;  1Z7K B;  1CHO I;  1NUB A;  2ENZ A;  1CGJ I;  1FAQ A;  3TJQ A;  1U5K A;  1PTR A;  2B8T A;  5FUW A;  3UGD A;  2ENN A;  1OYV I;  1DS2 I;  1IY5 A;  4UXH A;  3UFF A;  4HGU A;  4JCV E;  3VDU A;  1N13 A;  1BUS A;  1HPT A;  2XRC A;  4SGB I;  5EX3 A;  3RU0 A;  3SEK C;  1OMU A;  1TIH A;  3KY9 A;  3MEK A;  2LUY A;  3PDN A;  2BUS A;  3VE5 A;  1R0R I;  2V1C C;  1H0Z A;  2JZM A;  2V53 A;  2ORW A;  4UXJ A;  1LR8 A;  1M8C A;  1PCE A;  2E73 A;  2WVJ A;  2KMQ A;  1PJU A;  5FUY A;  1PPF I;  1CT2 I;  3SGQ I;  3OXG A;  2FNF X;  1XA6 A;  2J9R A;  2ODD A;  3BJI A;  1TBN A;  1W3S A;  1M8B A;  5EX0 A;  3OXF A;  2ARP F;  2B0U C;  3OVO A;  3D00 A;  2KMR A;  3E2I A;  1HDL A;  1RFH A;  5HQ8 A;  5HI7 A;  2DB6 A;  1VDD A;  2SGF I;  1DS3 I;  2GKT I;  2ORV A;  2QQE A;  2GKR I;  1UUC A;  1TBO A;  1OMT A;  1R79 A;  1V1I A;  2QPO A;  1Y1C A;  3HH2 C;  2E5R A;  1LR9 A;  1CT0 I;  1CSO I;  3UGI A;  4L9M A;  2NU2 I;  2P6A C;  3QWP A;  1TBR R;  4GI3 C;  3UEJ A;  1XX6 A;  2GVI A;  5FUV A;  1IY6 A;  2NU0 I;  2YUU A;  2CJS C;  2WCY A;  2F3C I;  2SGE I;  3OXL A;  2ROW A;  3E59 A;  1KBE A;  2J87 A;  1YU6 C;  1CE3 A;  2OD1 A;  2UZ3 A;  1XBT A;  2L8E A;  1LR7 A;  1MT1 A;  1OVO A;  1SGE I;  1SGR I;  1X74 A;  2SGD I;  2KCX A;  3FC3 A;  1TGS I;  2ERW A;  2VRW B;  2LEO A;  2KMP A;  1UVF A;  2OVO A;  2SGP I;  3B4V C;  4E1P A;  4A24 A;  2N1A B;  2SGQ I;  1AN1 I;  1CGI I;  2QQD A;  3UGL A;  1TUR A;  2GKV A;  1HJA I;  2JXD A;  5DAE A;  1YTP A;  1KMA A;  1SGQ I;  3OL0 A;  3VDP A;  1Y1B A;  1SGY I;  5JHW C;  3QTL D;  3CXL A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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