1TBNA

Nmr structure of a protein kinase c-g phorbol-binding domain, minimized average structure
Total Genus 6
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
6
sequence length
66
structure length
66
Chain Sequence
QTDDPRNKHKFRLHSYSSPTFCDHCGSLLYGLVHQGMKCSCCEMNVHRRCVRSVPSLCGVDHTERR
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Calcium-binding protein
molecule keywords PROTEIN KINASE C, GAMMA TYPE
publication title NMR structure of a protein kinase C-gamma phorbol-binding domain and study of protein-lipid micelle interactions.
pubmed doi rcsb
source organism Rattus rattus
total genus 6
structure length 66
sequence length 66
ec nomenclature ec 2.7.11.13: Protein kinase C.
pdb deposition date 1997-04-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00130 C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.20 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1tbnA00
5FUXA 2B8TA 2ORVA 1FAQA 3UGDA 1R79A 2JA1A 2YUUA 3UGLA 2J9RA 1PTRA 2ORWA 5FUYA 2GVIA 1KBEA 1RFHA 2ELIA 1Y8FA 2VRWB 2E73A 1TBNA 2ENNA 3UFFA 3UGIA 2QPOA 2FNFX 2QQEA 4UXJA 1XX6A 5FUWA 3UEYA 2ROWA 1KBFA 3UEJA 2UZ3A 4L9MA 1TBOA 2DB6A 3CXLA 2WVJA 5FUVA 1XBTA 4UXHA 2ENZA 4UXIA 1PTQA 3KY9A 4B6DA 2QQ0A 1W4RA 2J87A 1FARA 3BJIA 3E2IA 1XA6A 4FKDA
chains in the Genus database with same CATH superfamily
5CCLA 2B8TA 2GIVA 2NU4I 1KMAA 1Z7KB 4WP4A 1SGNI 1WTJA 4JCVE 3RU0A 5J8CA 1IW4A 1FY7A 2JA1A 1OMUA 1YU6C 2YUUA 2CWHA 2LB7A 1CE3A 1SGEI 2YQPA 2ORWA 1LR9A 4GI3C 2N52A 1TUSA 5E3PA 1KBEA 2JZMA 3UFFA 1Y8FA 3UGIA 2ENNA 1TBNA 1N13A 4AMLA 1V1IA 2QPOA 2V53A 2P6AC 1PCEA 3TOBA 1MT1A 3UEYA 4E1PA 2SGFI 2JW6A 2DIPA 2W0TA 1P9ZA 1SGDI 1V1HA 2DB6A 1KBFA 3E59A 1HPTA 4UXHA 1Y1BA 1PTQA 1CSOI 2SGQI 3R5BA 3TJQA 1ULKA 2A20A 3VE5A 3PDNA 3HH2C 2DKVA 1R0RI 1BMOA 1P9GA 2KMPA 2KCXA 2NU1I 2X3TA 5FUXA 1WGTA 1W3SA 1WGCA 1FAQA 2QQDA 1CT0I 1MJAA 2OVOA 3OXFA 3GOXA 1SGQI 2VRWB 1OVOA 1FYBA 5HQ8A 2X52A 2QQCA 2N71A 2SGPI 5CCMA 2KMRA 3OXLA 4UXJA 1XX6A 3OXGA 2OD1A 2UVOA 3UEJA 1LR8A 1TBOA 1CGII 2SGDI 3QAHA 4L9MA 3B4VC 2KMOA 1TURA 2ENZA 1M8CA 1M8BA 1Z2IA 1UHAA 1S20A 2QQ0A 3KY9A 2J87A 4SGBI 4A24A 1K7TA 2WCYA 3R5CA 2OZUA 5HI7A 1XA6A 2CJSC 3VDPA 1TBQR 4MPIA 2ORVA 2BUSA 2LUYA 2NU2I 5E3QA 1U5KA 2GKTI 1TGSI 4DNCA 3UGLA 1MJ9A 1PPFI 2SGEI 1PTRA 2ERWA 2ODDA 1YTPA 1CT2I 2GVIA 2K9HA 1RFHA 2N17A 3R5AA 9WGAA 2E73A 2JYYA 5J8FA 1TOTA 3TOAA 3TO6A 3FSXA 2NU3I 1Y1CA 3FSYA 3VDUA 1HDLA 1IY6A 5FUWA 2ROWA 2CWGA 3SEKC 2UZ3A 3MEKA 1HEVA 2F3CI 3CXLA 4E1RA 2NU0I 1VDDA 4UXIA 1PJUA 2WGCA 1CGJI 1NXUA 1CHOI 1DS2I 1MJBA 2B0UC 1FARA 2RIJA 2KMQA 3SGQI 2V1CA 1ULNA 2XRCA 4FKDA 3SGBI 1TIHA 1AN1I 5EX0A 1UVFA 1NUBA 2PQ8A 3TO9A 3UGDA 5EX3A 2LEOA 1R79A 1TBRR 2N1AB 2GKVA 3FC3A 1BUSA 2J9RA 1X4SA 5FUYA 1DS3I 2JXDA 2L7XA 1LR7A 2CWFA 2ELIA 3R5DA 1X74A 4OVOA 2GKRI 3TO7A 2L8EA 3D00A 2FNFX 2QQEA 1K7UA 2V1CC 3OVOA 1UUCA 3QTLD 3UOEA 1SGYI 1WKXA 5E3RA 1HJAI 1UVGA 5DAEA 2OU2A 3OL0A 1SGRI 2Y0MA 1OYVI 2E5RA 2RC4A 2ARPF 2WVJA 1XBTA 1K7VA 3QWPA 4HGUA 5FUVA 1IY5A 1OMTA 4B6DA 1ULMA 1CT4I 1W4RA 1SGPI 3BJIA 1H0ZA 2M5XA 1Q9BA 3E2IA 7WGAA 5JHWC
chains in the Genus database with same CATH topology
5CCLA 2B8TA 2NU4I 1KMAA 1Z7KB 1SGNI 4JCVE 3RU0A 1IW4A 1CE3A 2JA1A 1OMUA 1YU6C 2YUUA 1SGEI 2YQPA 2ORWA 1LR9A 4GI3C 2N52A 1TUSA 1KBEA 2JZMA 3UFFA 1Y8FA 3UGIA 2ENNA 1TBNA 1N13A 1V1IA 2QPOA 2V53A 2P6AC 1PCEA 1MT1A 3UEYA 4E1PA 2SGFI 2JW6A 2DIPA 2W0TA 1V1HA 1SGDI 2DB6A 1KBFA 3E59A 1HPTA 4UXHA 1Y1BA 1PTQA 1CSOI 2SGQI 3TJQA 3VE5A 2A20A 3PDNA 3HH2C 1R0RI 1BMOA 2KMPA 2KCXA 2NU1I 5FUXA 1W3SA 1FAQA 2QQDA 1CT0I 2OVOA 3OXFA 3GOXA 1SGQI 2VRWB 1OVOA 1FYBA 5HQ8A 2QQCA 2N71A 2SGPI 5CCMA 2KMRA 3OXLA 4UXJA 1XX6A 3OXGA 2OD1A 3UEJA 1LR8A 1TBOA 1CGII 2SGDI 4L9MA 3B4VC 2KMOA 1TURA 2ENZA 1M8CA 1M8BA 3KY9A 4SGBI 2QQ0A 2J87A 4A24A 2WCYA 5HI7A 1XA6A 2CJSC 3VDPA 1TBQR 2ORVA 2BUSA 2LUYA 2NU2I 1U5KA 2GKTI 1TGSI 3UGLA 1PPFI 2SGEI 1PTRA 2ERWA 2ODDA 1YTPA 1CT2I 2GVIA 2K9HA 1RFHA 2N17A 2E73A 2JYYA 1TOTA 2NU3I 1Y1CA 1HDLA 3VDUA 1IY6A 5FUWA 2ROWA 3SEKC 2UZ3A 3MEKA 2F3CI 3CXLA 4E1RA 2NU0I 1VDDA 4UXIA 1PJUA 1CGJI 1CHOI 1DS2I 2B0UC 1FARA 2KMQA 3SGQI 2V1CA 2XRCA 4FKDA 3SGBI 1TIHA 1AN1I 5EX0A 1UVFA 1NUBA 3UGDA 5EX3A 2LEOA 1R79A 1TBRR 2N1AB 2GKVA 3FC3A 1BUSA 2J9RA 1X4SA 5FUYA 1DS3I 2JXDA 2L7XA 1LR7A 2ELIA 1X74A 4OVOA 2GKRI 2L8EA 3D00A 2FNFX 2QQEA 2V1CC 3OVOA 3QTLD 1UUCA 1SGYI 1HJAI 1UVGA 5DAEA 3OL0A 1SGRI 1OYVI 2E5RA 2WVJA 2ARPF 4HGUA 1XBTA 5FUVA 3QWPA 1IY5A 1OMTA 4B6DA 1CT4I 1W4RA 1SGPI 3BJIA 1H0ZA 2M5XA 3E2IA 5JHWC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5FUX A;  2B8T A;  2ORV A;  1FAQ A;  3UGD A;  1R79 A;  2JA1 A;  2YUU A;  3UGL A;  2J9R A;  1PTR A;  2ORW A;  5FUY A;  2GVI A;  1KBE A;  1RFH A;  2ELI A;  1Y8F A;  2VRW B;  2E73 A;  1TBN A;  2ENN A;  3UFF A;  3UGI A;  2QPO A;  2FNF X;  2QQE A;  4UXJ A;  1XX6 A;  5FUW A;  3UEY A;  2ROW A;  1KBF A;  3UEJ A;  2UZ3 A;  4L9M A;  1TBO A;  2DB6 A;  3CXL A;  2WVJ A;  5FUV A;  1XBT A;  4UXH A;  2ENZ A;  4UXI A;  1PTQ A;  3KY9 A;  4B6D A;  2QQ0 A;  1W4R A;  2J87 A;  1FAR A;  3BJI A;  3E2I A;  1XA6 A;  4FKD A; 
#chains in the Genus database with same CATH topology
 5CCL A;  2B8T A;  2GIV A;  2NU4 I;  1KMA A;  1Z7K B;  4WP4 A;  1SGN I;  1WTJ A;  4JCV E;  3RU0 A;  5J8C A;  1IW4 A;  1FY7 A;  2JA1 A;  1OMU A;  1YU6 C;  2YUU A;  2CWH A;  2LB7 A;  1CE3 A;  1SGE I;  2YQP A;  2ORW A;  1LR9 A;  4GI3 C;  2N52 A;  1TUS A;  5E3P A;  1KBE A;  2JZM A;  3UFF A;  1Y8F A;  3UGI A;  2ENN A;  1TBN A;  1N13 A;  4AML A;  1V1I A;  2QPO A;  2V53 A;  2P6A C;  1PCE A;  3TOB A;  1MT1 A;  3UEY A;  4E1P A;  2SGF I;  2JW6 A;  2DIP A;  2W0T A;  1P9Z A;  1SGD I;  1V1H A;  2DB6 A;  1KBF A;  3E59 A;  1HPT A;  4UXH A;  1Y1B A;  1PTQ A;  1CSO I;  2SGQ I;  3R5B A;  3TJQ A;  1ULK A;  2A20 A;  3VE5 A;  3PDN A;  3HH2 C;  2DKV A;  1R0R I;  1BMO A;  1P9G A;  2KMP A;  2KCX A;  2NU1 I;  2X3T A;  5FUX A;  1WGT A;  1W3S A;  1WGC A;  1FAQ A;  2QQD A;  1CT0 I;  1MJA A;  2OVO A;  3OXF A;  3GOX A;  1SGQ I;  2VRW B;  1OVO A;  1FYB A;  5HQ8 A;  2X52 A;  2QQC A;  2N71 A;  2SGP I;  5CCM A;  2KMR A;  3OXL A;  4UXJ A;  1XX6 A;  3OXG A;  2OD1 A;  2UVO A;  3UEJ A;  1LR8 A;  1TBO A;  1CGI I;  2SGD I;  3QAH A;  4L9M A;  3B4V C;  2KMO A;  1TUR A;  2ENZ A;  1M8C A;  1M8B A;  1Z2I A;  1UHA A;  1S20 A;  2QQ0 A;  3KY9 A;  2J87 A;  4SGB I;  4A24 A;  1K7T A;  2WCY A;  3R5C A;  2OZU A;  5HI7 A;  1XA6 A;  2CJS C;  3VDP A;  1TBQ R;  4MPI A;  2ORV A;  2BUS A;  2LUY A;  2NU2 I;  5E3Q A;  1U5K A;  2GKT I;  1TGS I;  4DNC A;  3UGL A;  1MJ9 A;  1PPF I;  2SGE I;  1PTR A;  2ERW A;  2ODD A;  1YTP A;  1CT2 I;  2GVI A;  2K9H A;  1RFH A;  2N17 A;  3R5A A;  9WGA A;  2E73 A;  2JYY A;  5J8F A;  1TOT A;  3TOA A;  3TO6 A;  3FSX A;  2NU3 I;  1Y1C A;  3FSY A;  3VDU A;  1HDL A;  1IY6 A;  5FUW A;  2ROW A;  2CWG A;  3SEK C;  2UZ3 A;  3MEK A;  1HEV A;  2F3C I;  3CXL A;  4E1R A;  2NU0 I;  1VDD A;  4UXI A;  1PJU A;  2WGC A;  1CGJ I;  1NXU A;  1CHO I;  1DS2 I;  1MJB A;  2B0U C;  1FAR A;  2RIJ A;  2KMQ A;  3SGQ I;  2V1C A;  1ULN A;  2XRC A;  4FKD A;  3SGB I;  1TIH A;  1AN1 I;  5EX0 A;  1UVF A;  1NUB A;  2PQ8 A;  3TO9 A;  3UGD A;  5EX3 A;  2LEO A;  1R79 A;  1TBR R;  2N1A B;  2GKV A;  3FC3 A;  1BUS A;  2J9R A;  1X4S A;  5FUY A;  1DS3 I;  2JXD A;  2L7X A;  1LR7 A;  2CWF A;  2ELI A;  3R5D A;  1X74 A;  4OVO A;  2GKR I;  3TO7 A;  2L8E A;  3D00 A;  2FNF X;  2QQE A;  1K7U A;  2V1C C;  3OVO A;  1UUC A;  3QTL D;  3UOE A;  1SGY I;  1WKX A;  5E3R A;  1HJA I;  1UVG A;  5DAE A;  2OU2 A;  3OL0 A;  1SGR I;  2Y0M A;  1OYV I;  2E5R A;  2RC4 A;  2ARP F;  2WVJ A;  1XBT A;  1K7V A;  3QWP A;  4HGU A;  5FUV A;  1IY5 A;  1OMT A;  4B6D A;  1ULM A;  1CT4 I;  1W4R A;  1SGP I;  3BJI A;  1H0Z A;  2M5X A;  1Q9B A;  3E2I A;  7WGA A;  5JHW C; 
#chains in the Genus database with same CATH homology
 5CCL A;  2B8T A;  2NU4 I;  1KMA A;  1Z7K B;  1SGN I;  4JCV E;  3RU0 A;  1IW4 A;  1CE3 A;  2JA1 A;  1OMU A;  1YU6 C;  2YUU A;  1SGE I;  2YQP A;  2ORW A;  1LR9 A;  4GI3 C;  2N52 A;  1TUS A;  1KBE A;  2JZM A;  3UFF A;  1Y8F A;  3UGI A;  2ENN A;  1TBN A;  1N13 A;  1V1I A;  2QPO A;  2V53 A;  2P6A C;  1PCE A;  1MT1 A;  3UEY A;  4E1P A;  2SGF I;  2JW6 A;  2DIP A;  2W0T A;  1V1H A;  1SGD I;  2DB6 A;  1KBF A;  3E59 A;  1HPT A;  4UXH A;  1Y1B A;  1PTQ A;  1CSO I;  2SGQ I;  3TJQ A;  3VE5 A;  2A20 A;  3PDN A;  3HH2 C;  1R0R I;  1BMO A;  2KMP A;  2KCX A;  2NU1 I;  5FUX A;  1W3S A;  1FAQ A;  2QQD A;  1CT0 I;  2OVO A;  3OXF A;  3GOX A;  1SGQ I;  2VRW B;  1OVO A;  1FYB A;  5HQ8 A;  2QQC A;  2N71 A;  2SGP I;  5CCM A;  2KMR A;  3OXL A;  4UXJ A;  1XX6 A;  3OXG A;  2OD1 A;  3UEJ A;  1LR8 A;  1TBO A;  1CGI I;  2SGD I;  4L9M A;  3B4V C;  2KMO A;  1TUR A;  2ENZ A;  1M8C A;  1M8B A;  3KY9 A;  4SGB I;  2QQ0 A;  2J87 A;  4A24 A;  2WCY A;  5HI7 A;  1XA6 A;  2CJS C;  3VDP A;  1TBQ R;  2ORV A;  2BUS A;  2LUY A;  2NU2 I;  1U5K A;  2GKT I;  1TGS I;  3UGL A;  1PPF I;  2SGE I;  1PTR A;  2ERW A;  2ODD A;  1YTP A;  1CT2 I;  2GVI A;  2K9H A;  1RFH A;  2N17 A;  2E73 A;  2JYY A;  1TOT A;  2NU3 I;  1Y1C A;  1HDL A;  3VDU A;  1IY6 A;  5FUW A;  2ROW A;  3SEK C;  2UZ3 A;  3MEK A;  2F3C I;  3CXL A;  4E1R A;  2NU0 I;  1VDD A;  4UXI A;  1PJU A;  1CGJ I;  1CHO I;  1DS2 I;  2B0U C;  1FAR A;  2KMQ A;  3SGQ I;  2V1C A;  2XRC A;  4FKD A;  3SGB I;  1TIH A;  1AN1 I;  5EX0 A;  1UVF A;  1NUB A;  3UGD A;  5EX3 A;  2LEO A;  1R79 A;  1TBR R;  2N1A B;  2GKV A;  3FC3 A;  1BUS A;  2J9R A;  1X4S A;  5FUY A;  1DS3 I;  2JXD A;  2L7X A;  1LR7 A;  2ELI A;  1X74 A;  4OVO A;  2GKR I;  2L8E A;  3D00 A;  2FNF X;  2QQE A;  2V1C C;  3OVO A;  3QTL D;  1UUC A;  1SGY I;  1HJA I;  1UVG A;  5DAE A;  3OL0 A;  1SGR I;  1OYV I;  2E5R A;  2WVJ A;  2ARP F;  4HGU A;  1XBT A;  5FUV A;  3QWP A;  1IY5 A;  1OMT A;  4B6D A;  1CT4 I;  1W4R A;  1SGP I;  3BJI A;  1H0Z A;  2M5X A;  3E2I A;  5JHW C; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...