2SGPI

Pro 18 variant of turkey ovomucoid inhibitor third domain complexed with streptomyces griseus proteinase b at ph 6.5
Total Genus 11
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
11
sequence length
51
structure length
51
Chain Sequence
VDCSEYPKPACTPEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase/inhibitor
molecule keywords PROTEINASE B
publication title Contribution of peptide bonds to inhibitor-protease binding: crystal structures of the turkey ovomucoid third domain backbone variants OMTKY3-Pro18I and OMTKY3-psi[COO]-Leu18I in complex with Streptomyces griseus proteinase B (SGPB) and the structure of the free inhibitor, OMTKY-3-psi[CH2NH2+]-Asp19I
pubmed doi rcsb
source organism Meleagris gallopavo
total genus 11
structure length 51
sequence length 51
ec nomenclature
pdb deposition date 1999-03-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 2sgpI00
2KMQA 1UUCA 1M8CA 2NU0I 1H0ZA 2BUSA 1UVGA 2NU1I 1LR8A 1YU6C 5DAEA 1PJUA 1DS3I 1IY6A 1CE3A 3SGQI 1SGEI 1TGSI 2NU2I 1SGRI 2N71A 1OYVI 1TURA 2QQCA 2NU4I 1LR9A 2LEOA 2B0UC 2M5XA 1SGPI 1AN1I 2N17A 1CGII 1CHOI 2KCXA 2SGFI 3HH2C 1HJAI 5JHWC 3B4VC 4OVOA 4GI3C 2GKTI 1SGNI 1PPFI 1SGDI 1BMOA 1OMTA 2F3CI 1LR7A 1CT4I 4SGBI 1DS2I 2V53A 3TJQA 1CGJI 2N52A 4HGUA 1SGYI 1TUSA 1IW4A 2KMPA 1NUBA 1PCEA 2KMOA 1Z7KB 2QQDA 1TBRR 1FYBA 2SGQI 2ERWA 1IY5A 1TBQR 2ARPF 2GKVA 1UVFA 2JXDA 1SGQI 2SGPI 1CT0I 2SGEI 1KMAA 3SEKC 3SGBI 3QTLD 2GKRI 2SGDI 1TIHA 1Y1BA 2NU3I 2JYYA 2OVOA 1R0RI 3OVOA 1N13A 1BUSA 1OMUA 1HDLA 2WCYA 1CSOI 1Y1CA 2KMRA 1YTPA 2JZMA 1MT1A 2P6AC 1HPTA 1CT2I 1M8BA 2XRCA 1OVOA
chains in the Genus database with same CATH superfamily
2KMQA 2ORWA 4E1PA 1UUCA 3R5CA 4AMLA 1FARA 2ORVA 3UGIA 1RFHA 2WGCA 3R5DA 1M8CA 1K7UA 2LUYA 2NU0I 1KBEA 1H0ZA 3OXLA 2BUSA 1UVGA 2NU1I 1ULMA 1PTQA 3TO7A 5FUYA 1LR8A 4DNCA 1YU6C 1MJ9A 3D00A 5DAEA 2LB7A 5EX0A 1PJUA 2J87A 1DS3I 2X52A 1IY6A 4UXIA 1WGTA 1CE3A 1MJAA 3UGLA 3SGQI 1SGEI 3GOXA 2ENNA 2ROWA 1TGSI 3E2IA 5HI7A 2NU2I 1SGRI 2K9HA 2N71A 2WVJA 4B6DA 1OYVI 1TURA 1V1IA 2CWHA 2QQCA 2UZ3A 2X3TA 2E5RA 4A24A 1WTJA 1ULNA 2NU4I 3UFFA 3R5AA 1LR9A 2LEOA 2B0UC 1Z2IA 2M5XA 1SGPI 1AN1I 2N17A 3QWPA 1W4RA 3FC3A 1CGII 1FY7A 3FSXA 1CHOI 1MJBA 2KCXA 3BJIA 2DB6A 2SGFI 2J9RA 1V1HA 3HH2C 3OXFA 3VE5A 1Q9BA 1HJAI 2PQ8A 5JHWC 1K7VA 1XBTA 3B4VC 4GI3C 4OVOA 3UEYA 2GKTI 4JCVE 1SGNI 2V1CC 5FUWA 1PPFI 2CWFA 2L7XA 2QQ0A 3RU0A 1SGDI 1PTRA 3QAHA 1Y8FA 3UEJA 4UXJA 2DIPA 1BMOA 2ELIA 1OMTA 2F3CI 2UVOA 5CCMA 1LR7A 1CT4I 9WGAA 1VDDA 4SGBI 4WP4A 2Y0MA 2W0TA 1DS2I 2V53A 3TJQA 1CGJI 2N52A 3FSYA 4HGUA 1KBFA 2JA1A 1ULKA 4L9MA 1SGYI 1TUSA 1IW4A 1X4SA 2E73A 2ENZA 1NUBA 2KMPA 3VDUA 4E1RA 2OD1A 3MEKA 3PDNA 1PCEA 2KMOA 1Z7KB 2QQDA 2L8EA 1TBRR 1FYBA 1P9GA 2CWGA 1S20A 2ERWA 2SGQI 1NXUA 1TBQR 2YQPA 3CXLA 2ARPF 1IY5A 2GKVA 2RIJA 2ODDA 1UVFA 4UXHA 2JXDA 7WGAA 1SGQI 2QQEA 1UHAA 2QPOA 1R79A 1U5KA 3KY9A 4FKDA 3UGDA 2SGPI 1TOTA 1CT0I 2SGEI 1P9ZA 4MPIA 5FUXA 3TOBA 1KMAA 3E59A 3SEKC 1TBOA 3SGBI 5E3RA 2CJSC 3VDPA 3QTLD 5CCLA 1FAQA 2GVIA 2GKRI 1WGCA 2OZUA 2SGDI 1TIHA 1TBNA 2N1AB 1Y1BA 1WKXA 2NU3I 2JYYA 2OVOA 1R0RI 2VRWB 5E3QA 3TOAA 3OVOA 1N13A 1BUSA 5HQ8A 1OMUA 5FUVA 3UOEA 1HEVA 1HDLA 2WCYA 1CSOI 2RC4A 1Y1CA 2KMRA 5J8FA 2GIVA 3TO9A 2V1CA 2DKVA 1XX6A 1YTPA 2OU2A 3OL0A 5EX3A 2JW6A 2JZMA 5E3PA 1W3SA 3OXGA 1MT1A 2A20A 2FNFX 2P6AC 3R5BA 3TO6A 5J8CA 1HPTA 1CT2I 1XA6A 1X74A 1M8BA 1K7TA 2YUUA 2XRCA 2B8TA 1OVOA
chains in the Genus database with same CATH topology
2KMQA 2ORWA 4E1PA 1UUCA 1FARA 2ORVA 3UGIA 1RFHA 1M8CA 2LUYA 2NU0I 1KBEA 1H0ZA 3OXLA 2BUSA 1UVGA 2NU1I 1PTQA 5FUYA 1LR8A 1YU6C 3D00A 5DAEA 5EX0A 1PJUA 2J87A 1DS3I 1IY6A 4UXIA 1CE3A 3UGLA 3SGQI 1SGEI 3GOXA 2ENNA 2ROWA 1TGSI 3E2IA 5HI7A 2NU2I 1SGRI 2K9HA 2N71A 2WVJA 4B6DA 1OYVI 1TURA 1V1IA 2QQCA 2UZ3A 4A24A 2E5RA 2NU4I 3UFFA 1LR9A 2LEOA 2B0UC 2M5XA 1SGPI 1AN1I 2N17A 3QWPA 1W4RA 3FC3A 1CGII 1CHOI 2KCXA 3BJIA 2DB6A 2SGFI 2J9RA 1V1HA 3HH2C 3OXFA 3VE5A 1HJAI 5JHWC 3B4VC 1XBTA 4GI3C 4OVOA 3UEYA 2GKTI 4JCVE 1SGNI 2V1CC 5FUWA 1PPFI 2L7XA 2QQ0A 3RU0A 1SGDI 1PTRA 3UEJA 1Y8FA 4UXJA 2DIPA 1BMOA 2ELIA 1OMTA 2F3CI 5CCMA 1LR7A 1CT4I 1VDDA 4SGBI 2W0TA 1DS2I 2V53A 3TJQA 1CGJI 2N52A 4HGUA 1KBFA 2JA1A 4L9MA 1SGYI 1TUSA 1IW4A 1X4SA 2E73A 2ENZA 1NUBA 2KMPA 3VDUA 4E1RA 2OD1A 3MEKA 3PDNA 1PCEA 2KMOA 1Z7KB 2QQDA 2L8EA 1TBRR 1FYBA 2SGQI 2ERWA 3CXLA 1TBQR 2YQPA 1IY5A 2ARPF 2GKVA 2ODDA 1UVFA 4UXHA 2JXDA 1SGQI 2QQEA 2QPOA 1R79A 1U5KA 3KY9A 4FKDA 3UGDA 2SGPI 1TOTA 1CT0I 2SGEI 5FUXA 1KMAA 3E59A 3SEKC 1TBOA 3SGBI 3VDPA 2CJSC 5CCLA 3QTLD 1FAQA 2GVIA 2GKRI 2SGDI 1TIHA 1TBNA 2N1AB 1Y1BA 2NU3I 2JYYA 2OVOA 1R0RI 2VRWB 3OVOA 1N13A 1BUSA 5HQ8A 1OMUA 5FUVA 1HDLA 2WCYA 1CSOI 1Y1CA 2KMRA 2V1CA 1XX6A 1YTPA 3OL0A 5EX3A 2JW6A 2JZMA 1W3SA 3OXGA 1MT1A 2A20A 2FNFX 2P6AC 1HPTA 1CT2I 1XA6A 1X74A 1M8BA 2YUUA 2XRCA 2B8TA 1OVOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2KMQ A;  1UUC A;  1M8C A;  2NU0 I;  1H0Z A;  2BUS A;  1UVG A;  2NU1 I;  1LR8 A;  1YU6 C;  5DAE A;  1PJU A;  1DS3 I;  1IY6 A;  1CE3 A;  3SGQ I;  1SGE I;  1TGS I;  2NU2 I;  1SGR I;  2N71 A;  1OYV I;  1TUR A;  2QQC A;  2NU4 I;  1LR9 A;  2LEO A;  2B0U C;  2M5X A;  1SGP I;  1AN1 I;  2N17 A;  1CGI I;  1CHO I;  2KCX A;  2SGF I;  3HH2 C;  1HJA I;  5JHW C;  3B4V C;  4OVO A;  4GI3 C;  2GKT I;  1SGN I;  1PPF I;  1SGD I;  1BMO A;  1OMT A;  2F3C I;  1LR7 A;  1CT4 I;  4SGB I;  1DS2 I;  2V53 A;  3TJQ A;  1CGJ I;  2N52 A;  4HGU A;  1SGY I;  1TUS A;  1IW4 A;  2KMP A;  1NUB A;  1PCE A;  2KMO A;  1Z7K B;  2QQD A;  1TBR R;  1FYB A;  2SGQ I;  2ERW A;  1IY5 A;  1TBQ R;  2ARP F;  2GKV A;  1UVF A;  2JXD A;  1SGQ I;  2SGP I;  1CT0 I;  2SGE I;  1KMA A;  3SEK C;  3SGB I;  3QTL D;  2GKR I;  2SGD I;  1TIH A;  1Y1B A;  2NU3 I;  2JYY A;  2OVO A;  1R0R I;  3OVO A;  1N13 A;  1BUS A;  1OMU A;  1HDL A;  2WCY A;  1CSO I;  1Y1C A;  2KMR A;  1YTP A;  2JZM A;  1MT1 A;  2P6A C;  1HPT A;  1CT2 I;  1M8B A;  2XRC A;  1OVO A; 
#chains in the Genus database with same CATH topology
 2KMQ A;  2ORW A;  4E1P A;  1UUC A;  3R5C A;  4AML A;  1FAR A;  2ORV A;  3UGI A;  1RFH A;  2WGC A;  3R5D A;  1M8C A;  1K7U A;  2LUY A;  2NU0 I;  1KBE A;  1H0Z A;  3OXL A;  2BUS A;  1UVG A;  2NU1 I;  1ULM A;  1PTQ A;  3TO7 A;  5FUY A;  1LR8 A;  4DNC A;  1YU6 C;  1MJ9 A;  3D00 A;  5DAE A;  2LB7 A;  5EX0 A;  1PJU A;  2J87 A;  1DS3 I;  2X52 A;  1IY6 A;  4UXI A;  1WGT A;  1CE3 A;  1MJA A;  3UGL A;  3SGQ I;  1SGE I;  3GOX A;  2ENN A;  2ROW A;  1TGS I;  3E2I A;  5HI7 A;  2NU2 I;  1SGR I;  2K9H A;  2N71 A;  2WVJ A;  4B6D A;  1OYV I;  1TUR A;  1V1I A;  2CWH A;  2QQC A;  2UZ3 A;  2X3T A;  2E5R A;  4A24 A;  1WTJ A;  1ULN A;  2NU4 I;  3UFF A;  3R5A A;  1LR9 A;  2LEO A;  2B0U C;  1Z2I A;  2M5X A;  1SGP I;  1AN1 I;  2N17 A;  3QWP A;  1W4R A;  3FC3 A;  1CGI I;  1FY7 A;  3FSX A;  1CHO I;  1MJB A;  2KCX A;  3BJI A;  2DB6 A;  2SGF I;  2J9R A;  1V1H A;  3HH2 C;  3OXF A;  3VE5 A;  1Q9B A;  1HJA I;  2PQ8 A;  5JHW C;  1K7V A;  1XBT A;  3B4V C;  4GI3 C;  4OVO A;  3UEY A;  2GKT I;  4JCV E;  1SGN I;  2V1C C;  5FUW A;  1PPF I;  2CWF A;  2L7X A;  2QQ0 A;  3RU0 A;  1SGD I;  1PTR A;  3QAH A;  1Y8F A;  3UEJ A;  4UXJ A;  2DIP A;  1BMO A;  2ELI A;  1OMT A;  2F3C I;  2UVO A;  5CCM A;  1LR7 A;  1CT4 I;  9WGA A;  1VDD A;  4SGB I;  4WP4 A;  2Y0M A;  2W0T A;  1DS2 I;  2V53 A;  3TJQ A;  1CGJ I;  2N52 A;  3FSY A;  4HGU A;  1KBF A;  2JA1 A;  1ULK A;  4L9M A;  1SGY I;  1TUS A;  1IW4 A;  1X4S A;  2E73 A;  2ENZ A;  1NUB A;  2KMP A;  3VDU A;  4E1R A;  2OD1 A;  3MEK A;  3PDN A;  1PCE A;  2KMO A;  1Z7K B;  2QQD A;  2L8E A;  1TBR R;  1FYB A;  1P9G A;  2CWG A;  1S20 A;  2ERW A;  2SGQ I;  1NXU A;  1TBQ R;  2YQP A;  3CXL A;  2ARP F;  1IY5 A;  2GKV A;  2RIJ A;  2ODD A;  1UVF A;  4UXH A;  2JXD A;  7WGA A;  1SGQ I;  2QQE A;  1UHA A;  2QPO A;  1R79 A;  1U5K A;  3KY9 A;  4FKD A;  3UGD A;  2SGP I;  1TOT A;  1CT0 I;  2SGE I;  1P9Z A;  4MPI A;  5FUX A;  3TOB A;  1KMA A;  3E59 A;  3SEK C;  1TBO A;  3SGB I;  5E3R A;  2CJS C;  3VDP A;  3QTL D;  5CCL A;  1FAQ A;  2GVI A;  2GKR I;  1WGC A;  2OZU A;  2SGD I;  1TIH A;  1TBN A;  2N1A B;  1Y1B A;  1WKX A;  2NU3 I;  2JYY A;  2OVO A;  1R0R I;  2VRW B;  5E3Q A;  3TOA A;  3OVO A;  1N13 A;  1BUS A;  5HQ8 A;  1OMU A;  5FUV A;  3UOE A;  1HEV A;  1HDL A;  2WCY A;  1CSO I;  2RC4 A;  1Y1C A;  2KMR A;  5J8F A;  2GIV A;  3TO9 A;  2V1C A;  2DKV A;  1XX6 A;  1YTP A;  2OU2 A;  3OL0 A;  5EX3 A;  2JW6 A;  2JZM A;  5E3P A;  1W3S A;  3OXG A;  1MT1 A;  2A20 A;  2FNF X;  2P6A C;  3R5B A;  3TO6 A;  5J8C A;  1HPT A;  1CT2 I;  1XA6 A;  1X74 A;  1M8B A;  1K7T A;  2YUU A;  2XRC A;  2B8T A;  1OVO A; 
#chains in the Genus database with same CATH homology
 2KMQ A;  2ORW A;  4E1P A;  1UUC A;  1FAR A;  2ORV A;  3UGI A;  1RFH A;  1M8C A;  2LUY A;  2NU0 I;  1KBE A;  1H0Z A;  3OXL A;  2BUS A;  1UVG A;  2NU1 I;  1PTQ A;  5FUY A;  1LR8 A;  1YU6 C;  3D00 A;  5DAE A;  5EX0 A;  1PJU A;  2J87 A;  1DS3 I;  1IY6 A;  4UXI A;  1CE3 A;  3UGL A;  3SGQ I;  1SGE I;  3GOX A;  2ENN A;  2ROW A;  1TGS I;  3E2I A;  5HI7 A;  2NU2 I;  1SGR I;  2K9H A;  2N71 A;  2WVJ A;  4B6D A;  1OYV I;  1TUR A;  1V1I A;  2QQC A;  2UZ3 A;  4A24 A;  2E5R A;  2NU4 I;  3UFF A;  1LR9 A;  2LEO A;  2B0U C;  2M5X A;  1SGP I;  1AN1 I;  2N17 A;  3QWP A;  1W4R A;  3FC3 A;  1CGI I;  1CHO I;  2KCX A;  3BJI A;  2DB6 A;  2SGF I;  2J9R A;  1V1H A;  3HH2 C;  3OXF A;  3VE5 A;  1HJA I;  5JHW C;  3B4V C;  1XBT A;  4GI3 C;  4OVO A;  3UEY A;  2GKT I;  4JCV E;  1SGN I;  2V1C C;  5FUW A;  1PPF I;  2L7X A;  2QQ0 A;  3RU0 A;  1SGD I;  1PTR A;  3UEJ A;  1Y8F A;  4UXJ A;  2DIP A;  1BMO A;  2ELI A;  1OMT A;  2F3C I;  5CCM A;  1LR7 A;  1CT4 I;  1VDD A;  4SGB I;  2W0T A;  1DS2 I;  2V53 A;  3TJQ A;  1CGJ I;  2N52 A;  4HGU A;  1KBF A;  2JA1 A;  4L9M A;  1SGY I;  1TUS A;  1IW4 A;  1X4S A;  2E73 A;  2ENZ A;  1NUB A;  2KMP A;  3VDU A;  4E1R A;  2OD1 A;  3MEK A;  3PDN A;  1PCE A;  2KMO A;  1Z7K B;  2QQD A;  2L8E A;  1TBR R;  1FYB A;  2SGQ I;  2ERW A;  3CXL A;  1TBQ R;  2YQP A;  1IY5 A;  2ARP F;  2GKV A;  2ODD A;  1UVF A;  4UXH A;  2JXD A;  1SGQ I;  2QQE A;  2QPO A;  1R79 A;  1U5K A;  3KY9 A;  4FKD A;  3UGD A;  2SGP I;  1TOT A;  1CT0 I;  2SGE I;  5FUX A;  1KMA A;  3E59 A;  3SEK C;  1TBO A;  3SGB I;  3VDP A;  2CJS C;  5CCL A;  3QTL D;  1FAQ A;  2GVI A;  2GKR I;  2SGD I;  1TIH A;  1TBN A;  2N1A B;  1Y1B A;  2NU3 I;  2JYY A;  2OVO A;  1R0R I;  2VRW B;  3OVO A;  1N13 A;  1BUS A;  5HQ8 A;  1OMU A;  5FUV A;  1HDL A;  2WCY A;  1CSO I;  1Y1C A;  2KMR A;  2V1C A;  1XX6 A;  1YTP A;  3OL0 A;  5EX3 A;  2JW6 A;  2JZM A;  1W3S A;  3OXG A;  1MT1 A;  2A20 A;  2FNF X;  2P6A C;  1HPT A;  1CT2 I;  1XA6 A;  1X74 A;  1M8B A;  2YUU A;  2XRC A;  2B8T A;  1OVO A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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