1TOTA

Zz domain of cbp- a novel fold for a protein interaction module
Total Genus 13
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
13
sequence length
52
structure length
52
Chain Sequence
GQDRFVYTCNECKHHVETRWHCTVCEDYDLCINCYNTKSHTHKMVKWGLGLD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title ZZ domain of CBP: an unusual zinc finger fold in a protein interaction module
pubmed doi rcsb
molecule tags Transferase
source organism Mus musculus
molecule keywords CREB-binding protein
total genus 13
structure length 52
sequence length 52
ec nomenclature ec 2.3.1.48: Histone acetyltransferase.
pdb deposition date 2004-06-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00569 ZZ Zinc finger, ZZ type
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.90 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1totA00
2N1AB 1TOTA 2DIPA 2E5RA
chains in the Genus database with same CATH superfamily
1V1HA 2NU2I 3UGLA 1WGTA 2DIPA 2KMQA 2K9HA 2ODDA 5E3QA 1AN1I 3OXLA 2LUYA 2SGDI 5EX3A 2P6AC 2V1CC 1CT0I 3UOEA 2FNFX 2KMRA 2OU2A 1FAQA 1WGCA 1CGJI 1Q9BA 1SGEI 2CWFA 5FUXA 4UXHA 1PPFI 1TGSI 1U5KA 2A20A 2ENNA 2UZ3A 3R5BA 4WP4A 2GVIA 3TO9A 5JHWC 2JA1A 3D00A 2CWGA 1LR8A 1UVGA 1DS2I 1OMTA 1PTRA 1S20A 2NU4I 2LB7A 2QQCA 3OVOA 2CWHA 1TUSA 3E2IA 3RU0A 2WCYA 3UGIA 5HQ8A 2PQ8A 3TO7A 2WGCA 5FUWA 3E59A 1HJAI 3OXFA 3R5DA 1Y1CA 9WGAA 1LR9A 3R5AA 2B8TA 1CSOI 1KMAA 1LR7A 2SGQI 2X52A 1Z7KB 3UEJA 2JYYA 2SGPI 3KY9A 1BUSA 3UFFA 4AMLA 1X74A 3UGDA 1ULNA 1SGDI 2OD1A 1M8BA 2N52A 3FC3A 1PCEA 4DNCA 2GIVA 1SGNI 5CCLA 1PJUA 1P9ZA 3QWPA 5J8CA 3R5CA 1TURA 2E5RA 1ULKA 4UXIA 3TOBA 1UUCA 2X3TA 1K7UA 2J9RA 3FSYA 1CHOI 1R79A 1Z2IA 2OVOA 1UVFA 2QPOA 5FUVA 1SGRI 4GI3C 2L8EA 2GKRI 2QQ0A 2XRCA 1BMOA 2ARPF 3TJQA 1N13A 3MEKA 2RIJA 1M8CA 5EX0A 1V1IA 1PTQA 1YTPA 2YQPA 4A24A 3VE5A 3CXLA 1MT1A 1W4RA 5E3RA 1XX6A 1K7VA 1WTJA 1Y1BA 1WKXA 1YU6C 4HGUA 2QQEA 2W0TA 3QAHA 1FYBA 2ORVA 1IY5A 2ORWA 2V53A 3TOAA 2DB6A 2KMOA 1SGPI 2ERWA 2F3CI 3OXGA 1IY6A 1HDLA 1HEVA 2RC4A 1SGQI 1FARA 5CCMA 4OVOA 1MJBA 1NUBA 1VDDA 1CE3A 1TIHA 3UEYA 3VDUA 1KBFA 2KCXA 1DS3I 1IW4A 1ULMA 1SGYI 2OZUA 2NU0I 1CT4I 1RFHA 2J87A 4SGBI 2SGFI 2B0UC 2Y0MA 1XBTA 1TBNA 2DKVA 1CGII 2L7XA 5FUYA 3TO6A 3B4VC 1MJ9A 2M5XA 2V1CA 3GOXA 1XA6A 1KBEA 1P9GA 2KMPA 1OMUA 3OL0A 2GKVA 4MPIA 2JZMA 2N1AB 2ROWA 2YUUA 2JW6A 1Y8FA 1X4SA 3BJIA 1TOTA 4FKDA 1TBQR 2BUSA 4JCVE 1MJAA 1NXUA 1OYVI 2JXDA 3VDPA 5HI7A 4E1RA 3HH2C 2WVJA 3SGQI 2LEOA 3PDNA 2QQDA 4B6DA 1UHAA 1K7TA 5E3PA 1HPTA 2ENZA 2GKTI 1OVOA 2CJSC 2UVOA 4UXJA 2NU1I 2SGEI 3QTLD 1H0ZA 1FY7A 2VRWB 1TBOA 2ELIA 3SGBI 2N71A 1W3SA 3FSXA 4L9MA 7WGAA 5J8FA 1R0RI 2E73A 1CT2I 2N17A 4E1PA 2NU3I 5DAEA 3SEKC 1TBRR
chains in the Genus database with same CATH topology
1V1HA 2NU2I 3UGLA 2DIPA 2KMQA 2K9HA 2ODDA 1AN1I 3OXLA 2LUYA 2SGDI 5EX3A 2P6AC 2V1CC 1CT0I 2FNFX 2KMRA 1FAQA 1CGJI 1SGEI 5FUXA 4UXHA 1PPFI 1TGSI 1U5KA 2A20A 2ENNA 2UZ3A 2GVIA 5JHWC 2JA1A 3D00A 1LR8A 1DS2I 1PTRA 1OMTA 1UVGA 2NU4I 3RU0A 2QQCA 3OVOA 1TUSA 3E2IA 5HQ8A 2WCYA 3UGIA 5FUWA 3E59A 1HJAI 3OXFA 1Y1CA 1LR9A 2B8TA 1CSOI 1LR7A 2SGQI 1Z7KB 3UEJA 2JYYA 2SGPI 3KY9A 1BUSA 3UFFA 1X74A 3UGDA 1SGDI 2OD1A 1M8BA 2N52A 3FC3A 1PCEA 5CCLA 1SGNI 1PJUA 3QWPA 1TURA 2E5RA 4UXIA 1UUCA 2J9RA 1CHOI 1R79A 2OVOA 1UVFA 2QPOA 5FUVA 1SGRI 4GI3C 2L8EA 2GKRI 2QQ0A 2XRCA 1BMOA 2ARPF 3TJQA 1N13A 3MEKA 1M8CA 5EX0A 1V1IA 1PTQA 1YTPA 2YQPA 4A24A 3VE5A 3CXLA 1MT1A 1W4RA 1XX6A 1Y1BA 1YU6C 4HGUA 2QQEA 2W0TA 1FYBA 2ORVA 1IY5A 2ORWA 2V53A 2DB6A 2KMOA 1SGPI 2ERWA 2F3CI 3OXGA 1IY6A 1HDLA 1SGQI 1FARA 5CCMA 4OVOA 1VDDA 1NUBA 1CE3A 1TIHA 3UEYA 3VDUA 1KBFA 2KCXA 1DS3I 1IW4A 1SGYI 2NU0I 1CT4I 1RFHA 2J87A 4SGBI 2SGFI 2B0UC 1XBTA 1TBNA 1CGII 2L7XA 5FUYA 3B4VC 2V1CA 2M5XA 3GOXA 1XA6A 1KBEA 2KMPA 1OMUA 3OL0A 2GKVA 1KMAA 2JZMA 2N1AB 2ROWA 2YUUA 2JW6A 1Y8FA 1X4SA 3BJIA 1TOTA 4FKDA 1TBQR 2BUSA 4JCVE 1OYVI 2JXDA 3VDPA 5HI7A 4E1RA 3HH2C 2WVJA 3SGQI 2LEOA 3PDNA 2QQDA 4B6DA 1HPTA 2ENZA 2GKTI 1OVOA 2CJSC 4UXJA 2NU1I 2SGEI 3QTLD 1H0ZA 2VRWB 1TBOA 2ELIA 3SGBI 2N71A 1W3SA 4L9MA 1R0RI 2E73A 1CT2I 2N17A 4E1PA 2NU3I 5DAEA 3SEKC 1TBRR
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2N1A B;  1TOT A;  2DIP A;  2E5R A; 
#chains in the Genus database with same CATH topology
 1V1H A;  2NU2 I;  3UGL A;  1WGT A;  2DIP A;  2KMQ A;  2K9H A;  2ODD A;  5E3Q A;  1AN1 I;  3OXL A;  2LUY A;  2SGD I;  5EX3 A;  2P6A C;  2V1C C;  1CT0 I;  3UOE A;  2FNF X;  2KMR A;  2OU2 A;  1FAQ A;  1WGC A;  1CGJ I;  1Q9B A;  1SGE I;  2CWF A;  5FUX A;  4UXH A;  1PPF I;  1TGS I;  1U5K A;  2A20 A;  2ENN A;  2UZ3 A;  3R5B A;  4WP4 A;  2GVI A;  3TO9 A;  5JHW C;  2JA1 A;  3D00 A;  2CWG A;  1LR8 A;  1UVG A;  1DS2 I;  1OMT A;  1PTR A;  1S20 A;  2NU4 I;  2LB7 A;  2QQC A;  3OVO A;  2CWH A;  1TUS A;  3E2I A;  3RU0 A;  2WCY A;  3UGI A;  5HQ8 A;  2PQ8 A;  3TO7 A;  2WGC A;  5FUW A;  3E59 A;  1HJA I;  3OXF A;  3R5D A;  1Y1C A;  9WGA A;  1LR9 A;  3R5A A;  2B8T A;  1CSO I;  1KMA A;  1LR7 A;  2SGQ I;  2X52 A;  1Z7K B;  3UEJ A;  2JYY A;  2SGP I;  3KY9 A;  1BUS A;  3UFF A;  4AML A;  1X74 A;  3UGD A;  1ULN A;  1SGD I;  2OD1 A;  1M8B A;  2N52 A;  3FC3 A;  1PCE A;  4DNC A;  2GIV A;  1SGN I;  5CCL A;  1PJU A;  1P9Z A;  3QWP A;  5J8C A;  3R5C A;  1TUR A;  2E5R A;  1ULK A;  4UXI A;  3TOB A;  1UUC A;  2X3T A;  1K7U A;  2J9R A;  3FSY A;  1CHO I;  1R79 A;  1Z2I A;  2OVO A;  1UVF A;  2QPO A;  5FUV A;  1SGR I;  4GI3 C;  2L8E A;  2GKR I;  2QQ0 A;  2XRC A;  1BMO A;  2ARP F;  3TJQ A;  1N13 A;  3MEK A;  2RIJ A;  1M8C A;  5EX0 A;  1V1I A;  1PTQ A;  1YTP A;  2YQP A;  4A24 A;  3VE5 A;  3CXL A;  1MT1 A;  1W4R A;  5E3R A;  1XX6 A;  1K7V A;  1WTJ A;  1Y1B A;  1WKX A;  1YU6 C;  4HGU A;  2QQE A;  2W0T A;  3QAH A;  1FYB A;  2ORV A;  1IY5 A;  2ORW A;  2V53 A;  3TOA A;  2DB6 A;  2KMO A;  1SGP I;  2ERW A;  2F3C I;  3OXG A;  1IY6 A;  1HDL A;  1HEV A;  2RC4 A;  1SGQ I;  1FAR A;  5CCM A;  4OVO A;  1MJB A;  1NUB A;  1VDD A;  1CE3 A;  1TIH A;  3UEY A;  3VDU A;  1KBF A;  2KCX A;  1DS3 I;  1IW4 A;  1ULM A;  1SGY I;  2OZU A;  2NU0 I;  1CT4 I;  1RFH A;  2J87 A;  4SGB I;  2SGF I;  2B0U C;  2Y0M A;  1XBT A;  1TBN A;  2DKV A;  1CGI I;  2L7X A;  5FUY A;  3TO6 A;  3B4V C;  1MJ9 A;  2M5X A;  2V1C A;  3GOX A;  1XA6 A;  1KBE A;  1P9G A;  2KMP A;  1OMU A;  3OL0 A;  2GKV A;  4MPI A;  2JZM A;  2N1A B;  2ROW A;  2YUU A;  2JW6 A;  1Y8F A;  1X4S A;  3BJI A;  1TOT A;  4FKD A;  1TBQ R;  2BUS A;  4JCV E;  1MJA A;  1NXU A;  1OYV I;  2JXD A;  3VDP A;  5HI7 A;  4E1R A;  3HH2 C;  2WVJ A;  3SGQ I;  2LEO A;  3PDN A;  2QQD A;  4B6D A;  1UHA A;  1K7T A;  5E3P A;  1HPT A;  2ENZ A;  2GKT I;  1OVO A;  2CJS C;  2UVO A;  4UXJ A;  2NU1 I;  2SGE I;  3QTL D;  1H0Z A;  1FY7 A;  2VRW B;  1TBO A;  2ELI A;  3SGB I;  2N71 A;  1W3S A;  3FSX A;  4L9M A;  7WGA A;  5J8F A;  1R0R I;  2E73 A;  1CT2 I;  2N17 A;  4E1P A;  2NU3 I;  5DAE A;  3SEK C;  1TBR R; 
#chains in the Genus database with same CATH homology
 1V1H A;  2NU2 I;  3UGL A;  2DIP A;  2KMQ A;  2K9H A;  2ODD A;  1AN1 I;  3OXL A;  2LUY A;  2SGD I;  5EX3 A;  2P6A C;  2V1C C;  1CT0 I;  2FNF X;  2KMR A;  1FAQ A;  1CGJ I;  1SGE I;  5FUX A;  4UXH A;  1PPF I;  1TGS I;  1U5K A;  2A20 A;  2ENN A;  2UZ3 A;  2GVI A;  5JHW C;  2JA1 A;  3D00 A;  1LR8 A;  1DS2 I;  1PTR A;  1OMT A;  1UVG A;  2NU4 I;  3RU0 A;  2QQC A;  3OVO A;  1TUS A;  3E2I A;  5HQ8 A;  2WCY A;  3UGI A;  5FUW A;  3E59 A;  1HJA I;  3OXF A;  1Y1C A;  1LR9 A;  2B8T A;  1CSO I;  1LR7 A;  2SGQ I;  1Z7K B;  3UEJ A;  2JYY A;  2SGP I;  3KY9 A;  1BUS A;  3UFF A;  1X74 A;  3UGD A;  1SGD I;  2OD1 A;  1M8B A;  2N52 A;  3FC3 A;  1PCE A;  5CCL A;  1SGN I;  1PJU A;  3QWP A;  1TUR A;  2E5R A;  4UXI A;  1UUC A;  2J9R A;  1CHO I;  1R79 A;  2OVO A;  1UVF A;  2QPO A;  5FUV A;  1SGR I;  4GI3 C;  2L8E A;  2GKR I;  2QQ0 A;  2XRC A;  1BMO A;  2ARP F;  3TJQ A;  1N13 A;  3MEK A;  1M8C A;  5EX0 A;  1V1I A;  1PTQ A;  1YTP A;  2YQP A;  4A24 A;  3VE5 A;  3CXL A;  1MT1 A;  1W4R A;  1XX6 A;  1Y1B A;  1YU6 C;  4HGU A;  2QQE A;  2W0T A;  1FYB A;  2ORV A;  1IY5 A;  2ORW A;  2V53 A;  2DB6 A;  2KMO A;  1SGP I;  2ERW A;  2F3C I;  3OXG A;  1IY6 A;  1HDL A;  1SGQ I;  1FAR A;  5CCM A;  4OVO A;  1VDD A;  1NUB A;  1CE3 A;  1TIH A;  3UEY A;  3VDU A;  1KBF A;  2KCX A;  1DS3 I;  1IW4 A;  1SGY I;  2NU0 I;  1CT4 I;  1RFH A;  2J87 A;  4SGB I;  2SGF I;  2B0U C;  1XBT A;  1TBN A;  1CGI I;  2L7X A;  5FUY A;  3B4V C;  2V1C A;  2M5X A;  3GOX A;  1XA6 A;  1KBE A;  2KMP A;  1OMU A;  3OL0 A;  2GKV A;  1KMA A;  2JZM A;  2N1A B;  2ROW A;  2YUU A;  2JW6 A;  1Y8F A;  1X4S A;  3BJI A;  1TOT A;  4FKD A;  1TBQ R;  2BUS A;  4JCV E;  1OYV I;  2JXD A;  3VDP A;  5HI7 A;  4E1R A;  3HH2 C;  2WVJ A;  3SGQ I;  2LEO A;  3PDN A;  2QQD A;  4B6D A;  1HPT A;  2ENZ A;  2GKT I;  1OVO A;  2CJS C;  4UXJ A;  2NU1 I;  2SGE I;  3QTL D;  1H0Z A;  2VRW B;  1TBO A;  2ELI A;  3SGB I;  2N71 A;  1W3S A;  4L9M A;  1R0R I;  2E73 A;  1CT2 I;  2N17 A;  4E1P A;  2NU3 I;  5DAE A;  3SEK C;  1TBR R; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...