3UGIA

Structural and functional characterization of an anesthetic binding site in the second cysteine-rich domain of protein kinase c delta
Total Genus 11
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
11
sequence length
65
structure length
65
Chain Sequence
GSRRASVGSHRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCEFIVTD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Metal binding protein
source organism Mus musculus
publication title Structural and Functional Characterization of an Anesthetic Binding Site in the Second Cysteine-Rich Domain of Protein Kinase Cdelta
pubmed doi rcsb
molecule keywords Protein kinase C delta type
total genus 11
structure length 65
sequence length 65
chains with identical sequence B
ec nomenclature ec 2.7.10.2: Non-specific protein-tyrosine kinase.
pdb deposition date 2011-11-02
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.20 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 3ugiA01
2QPOA 1XA6A 2ORWA 4UXHA 1FAQA 2WVJA 4UXJA 5FUWA 1PTQA 1XX6A 2FNFX 2QQEA 4UXIA 1KBFA 1R79A 2ENZA 2E73A 1Y8FA 2JA1A 2YUUA 3E2IA 2ORVA 5FUYA 4L9MA 2DB6A 3UGDA 4FKDA 3UGLA 1TBOA 3CXLA 2ROWA 3UFFA 4B6DA 1FARA 1W4RA 2ELIA 1KBEA 5FUVA 1RFHA 3UEYA 1XBTA 1TBNA 2J87A 2UZ3A 5FUXA 2B8TA 2QQ0A 2ENNA 1PTRA 3BJIA 3KY9A 2GVIA 3UEJA 2VRWB 2J9RA 3UGIA
chains in the Genus database with same CATH superfamily
1UVFA 1XA6A 2A20A 2QPOA 2XRCA 1YTPA 1NUBA 1OVOA 2GKTI 2RIJA 4UXIA 1HEVA 1R79A 2W0TA 3QWPA 1OMTA 2OU2A 2YUUA 3E2IA 5FUYA 5CCMA 3FC3A 1SGDI 2DIPA 2F3CI 1TURA 3OVOA 1Z7KB 4L9MA 3UGLA 1WTJA 3CXLA 4E1RA 2E5RA 2PQ8A 3R5CA 4JCVE 5HQ8A 1PCEA 2SGEI 3SGBI 5DAEA 4WP4A 1CT4I 1WGTA 3TO7A 1UUCA 1HPTA 1TIHA 5JHWC 1SGNI 1P9GA 2KMPA 2GKVA 2QQ0A 1X74A 2CWHA 2QQDA 4OVOA 1PTRA 2M5XA 3OL0A 9WGAA 5J8CA 1SGRI 1DS3I 1U5KA 2B0UC 1H0ZA 1CT0I 2VRWB 3QTLD 2CWGA 3OXFA 5EX0A 2DKVA 1N13A 4UXHA 2WVJA 4UXJA 1XX6A 1KMAA 1M8BA 1WKXA 2RC4A 1Y8FA 2JW6A 5E3QA 3TO9A 1BUSA 5J8FA 1IY6A 2SGQI 1UVGA 1Y1BA 1VDDA 1P9ZA 2NU4I 1MT1A 4SGBI 1CHOI 1R0RI 1MJ9A 1HDLA 1Z2IA 2JZMA 1UHAA 3TJQA 3SEKC 1TUSA 2ELIA 7WGAA 2ERWA 1RFHA 2K9HA 2SGDI 1LR7A 2V1CA 5FUXA 5HI7A 1ULMA 2YQPA 1LR9A 1FAQA 3TOAA 2KMRA 2LEOA 2KCXA 2GVIA 3UEJA 3B4VC 1NXUA 1IW4A 3UGIA 1WGCA 2N71A 1K7TA 2OZUA 2V1CC 2WGCA 1TBRR 4GI3C 5FUWA 3FSXA 1MJBA 1M8CA 1PTQA 2CWFA 2FNFX 3SGQI 1BMOA 3R5AA 1KBFA 1TBQR 2E73A 2JA1A 2L8EA 5CCLA 1ULKA 2UVOA 1K7VA 1W3SA 3OXLA 1AN1I 4AMLA 1CGJI 4FKDA 3UOEA 2LUYA 1CT2I 2X52A 1Q9BA 2NU2I 1SGPI 1YU6C 2JXDA 3R5BA 2LB7A 4B6DA 1V1IA 1PJUA 4HGUA 2BUSA 1MJAA 1W4RA 2CJSC 3VDPA 2SGPI 3VDUA 2N1AB 1SGEI 1TBNA 1TGSI 2UZ3A 3HH2C 3RU0A 2B8TA 1SGYI 2ODDA 3TOBA 3VE5A 4MPIA 3BJIA 1IY5A 2OD1A 3QAHA 3R5DA 1CE3A 2Y0MA 1FYBA 2ORWA 3MEKA 1LR8A 2GKRI 2NU1I 2QQEA 2P6AC 2ENZA 5E3PA 3GOXA 1X4SA 1CGII 2N17A 2ORVA 2DB6A 3UGDA 2X3TA 1TOTA 1TBOA 2SGFI 2KMOA 2L7XA 4E1PA 2V53A 2GIVA 2ROWA 3UFFA 1Y1CA 3E59A 1K7UA 1PPFI 1FARA 3FSYA 1DS2I 2OVOA 1KBEA 2NU3I 5E3RA 1V1HA 2NU0I 5FUVA 3TO6A 1XBTA 2WCYA 5EX3A 2JYYA 2J87A 2N52A 1FY7A 1S20A 3UEYA 2ARPF 4A24A 1CSOI 2ENNA 1ULNA 1HJAI 3PDNA 1SGQI 3D00A 3KY9A 3OXGA 2QQCA 2KMQA 1OYVI 2J9RA 4DNCA 1OMUA
chains in the Genus database with same CATH topology
1UVFA 1XA6A 2A20A 2QPOA 2XRCA 1YTPA 1NUBA 1OVOA 2GKTI 4UXIA 1R79A 2W0TA 3QWPA 1OMTA 2YUUA 3E2IA 5FUYA 5CCMA 3FC3A 1SGDI 2DIPA 2F3CI 1TURA 3OVOA 1Z7KB 4L9MA 3UGLA 4E1RA 3CXLA 2E5RA 4JCVE 5HQ8A 1PCEA 2SGEI 3SGBI 5DAEA 1CT4I 1UUCA 1HPTA 1TIHA 5JHWC 1SGNI 2KMPA 2GKVA 2QQ0A 1X74A 2QQDA 4OVOA 1PTRA 2M5XA 3OL0A 1SGRI 1DS3I 1U5KA 2B0UC 1H0ZA 1CT0I 2VRWB 3QTLD 3OXFA 5EX0A 4UXHA 1N13A 2WVJA 4UXJA 1XX6A 1KMAA 1M8BA 1Y8FA 2JW6A 1BUSA 1IY6A 2SGQI 1UVGA 1Y1BA 1VDDA 2NU4I 1MT1A 4SGBI 1CHOI 1R0RI 1HDLA 2JZMA 3TJQA 3SEKC 1TUSA 2ELIA 2ERWA 1RFHA 2K9HA 2SGDI 1LR7A 2V1CA 5FUXA 5HI7A 2YQPA 1LR9A 2KMRA 2LEOA 2KCXA 2GVIA 3UEJA 3B4VC 1IW4A 3UGIA 2V1CC 2N71A 4GI3C 1TBRR 1FAQA 5FUWA 1M8CA 1PTQA 2FNFX 3SGQI 1KBFA 1BMOA 1TBQR 2E73A 2JA1A 2L8EA 5CCLA 1W3SA 3OXLA 1AN1I 1CGJI 4FKDA 2LUYA 1CT2I 2NU2I 1SGPI 1YU6C 2JXDA 4B6DA 1PJUA 1V1IA 4HGUA 2BUSA 1W4RA 3VDPA 2CJSC 2SGPI 3VDUA 2N1AB 1SGEI 1TBNA 1TGSI 2UZ3A 3HH2C 3RU0A 2B8TA 1SGYI 2ODDA 3VE5A 3BJIA 1IY5A 2OD1A 1CE3A 1FYBA 2ORWA 3MEKA 1LR8A 2GKRI 2NU1I 2QQEA 2P6AC 2ENZA 3GOXA 1X4SA 1CGII 2N17A 2ORVA 2DB6A 3UGDA 1TOTA 1TBOA 2SGFI 2KMOA 2L7XA 4E1PA 2V53A 2ROWA 3UFFA 1Y1CA 3E59A 1PPFI 1FARA 1DS2I 2OVOA 1KBEA 2NU3I 5FUVA 1V1HA 2NU0I 3UEYA 1XBTA 2WCYA 5EX3A 2JYYA 2J87A 2N52A 4A24A 2ARPF 1CSOI 2ENNA 3PDNA 1HJAI 1SGQI 3D00A 3KY9A 3OXGA 2QQCA 2KMQA 1OYVI 2J9RA 1OMUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2QPO A;  1XA6 A;  2ORW A;  4UXH A;  1FAQ A;  2WVJ A;  4UXJ A;  5FUW A;  1PTQ A;  1XX6 A;  2FNF X;  2QQE A;  4UXI A;  1KBF A;  1R79 A;  2ENZ A;  2E73 A;  1Y8F A;  2JA1 A;  2YUU A;  3E2I A;  2ORV A;  5FUY A;  4L9M A;  2DB6 A;  3UGD A;  4FKD A;  3UGL A;  1TBO A;  3CXL A;  2ROW A;  3UFF A;  4B6D A;  1FAR A;  1W4R A;  2ELI A;  1KBE A;  5FUV A;  1RFH A;  3UEY A;  1XBT A;  1TBN A;  2J87 A;  2UZ3 A;  5FUX A;  2B8T A;  2QQ0 A;  2ENN A;  1PTR A;  3BJI A;  3KY9 A;  2GVI A;  3UEJ A;  2VRW B;  2J9R A;  3UGI A; 
#chains in the Genus database with same CATH topology
 1UVF A;  1XA6 A;  2A20 A;  2QPO A;  2XRC A;  1YTP A;  1NUB A;  1OVO A;  2GKT I;  2RIJ A;  4UXI A;  1HEV A;  1R79 A;  2W0T A;  3QWP A;  1OMT A;  2OU2 A;  2YUU A;  3E2I A;  5FUY A;  5CCM A;  3FC3 A;  1SGD I;  2DIP A;  2F3C I;  1TUR A;  3OVO A;  1Z7K B;  4L9M A;  3UGL A;  1WTJ A;  3CXL A;  4E1R A;  2E5R A;  2PQ8 A;  3R5C A;  4JCV E;  5HQ8 A;  1PCE A;  2SGE I;  3SGB I;  5DAE A;  4WP4 A;  1CT4 I;  1WGT A;  3TO7 A;  1UUC A;  1HPT A;  1TIH A;  5JHW C;  1SGN I;  1P9G A;  2KMP A;  2GKV A;  2QQ0 A;  1X74 A;  2CWH A;  2QQD A;  4OVO A;  1PTR A;  2M5X A;  3OL0 A;  9WGA A;  5J8C A;  1SGR I;  1DS3 I;  1U5K A;  2B0U C;  1H0Z A;  1CT0 I;  2VRW B;  3QTL D;  2CWG A;  3OXF A;  5EX0 A;  2DKV A;  1N13 A;  4UXH A;  2WVJ A;  4UXJ A;  1XX6 A;  1KMA A;  1M8B A;  1WKX A;  2RC4 A;  1Y8F A;  2JW6 A;  5E3Q A;  3TO9 A;  1BUS A;  5J8F A;  1IY6 A;  2SGQ I;  1UVG A;  1Y1B A;  1VDD A;  1P9Z A;  2NU4 I;  1MT1 A;  4SGB I;  1CHO I;  1R0R I;  1MJ9 A;  1HDL A;  1Z2I A;  2JZM A;  1UHA A;  3TJQ A;  3SEK C;  1TUS A;  2ELI A;  7WGA A;  2ERW A;  1RFH A;  2K9H A;  2SGD I;  1LR7 A;  2V1C A;  5FUX A;  5HI7 A;  1ULM A;  2YQP A;  1LR9 A;  1FAQ A;  3TOA A;  2KMR A;  2LEO A;  2KCX A;  2GVI A;  3UEJ A;  3B4V C;  1NXU A;  1IW4 A;  3UGI A;  1WGC A;  2N71 A;  1K7T A;  2OZU A;  2V1C C;  2WGC A;  1TBR R;  4GI3 C;  5FUW A;  3FSX A;  1MJB A;  1M8C A;  1PTQ A;  2CWF A;  2FNF X;  3SGQ I;  1BMO A;  3R5A A;  1KBF A;  1TBQ R;  2E73 A;  2JA1 A;  2L8E A;  5CCL A;  1ULK A;  2UVO A;  1K7V A;  1W3S A;  3OXL A;  1AN1 I;  4AML A;  1CGJ I;  4FKD A;  3UOE A;  2LUY A;  1CT2 I;  2X52 A;  1Q9B A;  2NU2 I;  1SGP I;  1YU6 C;  2JXD A;  3R5B A;  2LB7 A;  4B6D A;  1V1I A;  1PJU A;  4HGU A;  2BUS A;  1MJA A;  1W4R A;  2CJS C;  3VDP A;  2SGP I;  3VDU A;  2N1A B;  1SGE I;  1TBN A;  1TGS I;  2UZ3 A;  3HH2 C;  3RU0 A;  2B8T A;  1SGY I;  2ODD A;  3TOB A;  3VE5 A;  4MPI A;  3BJI A;  1IY5 A;  2OD1 A;  3QAH A;  3R5D A;  1CE3 A;  2Y0M A;  1FYB A;  2ORW A;  3MEK A;  1LR8 A;  2GKR I;  2NU1 I;  2QQE A;  2P6A C;  2ENZ A;  5E3P A;  3GOX A;  1X4S A;  1CGI I;  2N17 A;  2ORV A;  2DB6 A;  3UGD A;  2X3T A;  1TOT A;  1TBO A;  2SGF I;  2KMO A;  2L7X A;  4E1P A;  2V53 A;  2GIV A;  2ROW A;  3UFF A;  1Y1C A;  3E59 A;  1K7U A;  1PPF I;  1FAR A;  3FSY A;  1DS2 I;  2OVO A;  1KBE A;  2NU3 I;  5E3R A;  1V1H A;  2NU0 I;  5FUV A;  3TO6 A;  1XBT A;  2WCY A;  5EX3 A;  2JYY A;  2J87 A;  2N52 A;  1FY7 A;  1S20 A;  3UEY A;  2ARP F;  4A24 A;  1CSO I;  2ENN A;  1ULN A;  1HJA I;  3PDN A;  1SGQ I;  3D00 A;  3KY9 A;  3OXG A;  2QQC A;  2KMQ A;  1OYV I;  2J9R A;  4DNC A;  1OMU A; 
#chains in the Genus database with same CATH homology
 1UVF A;  1XA6 A;  2A20 A;  2QPO A;  2XRC A;  1YTP A;  1NUB A;  1OVO A;  2GKT I;  4UXI A;  1R79 A;  2W0T A;  3QWP A;  1OMT A;  2YUU A;  3E2I A;  5FUY A;  5CCM A;  3FC3 A;  1SGD I;  2DIP A;  2F3C I;  1TUR A;  3OVO A;  1Z7K B;  4L9M A;  3UGL A;  4E1R A;  3CXL A;  2E5R A;  4JCV E;  5HQ8 A;  1PCE A;  2SGE I;  3SGB I;  5DAE A;  1CT4 I;  1UUC A;  1HPT A;  1TIH A;  5JHW C;  1SGN I;  2KMP A;  2GKV A;  2QQ0 A;  1X74 A;  2QQD A;  4OVO A;  1PTR A;  2M5X A;  3OL0 A;  1SGR I;  1DS3 I;  1U5K A;  2B0U C;  1H0Z A;  1CT0 I;  2VRW B;  3QTL D;  3OXF A;  5EX0 A;  4UXH A;  1N13 A;  2WVJ A;  4UXJ A;  1XX6 A;  1KMA A;  1M8B A;  1Y8F A;  2JW6 A;  1BUS A;  1IY6 A;  2SGQ I;  1UVG A;  1Y1B A;  1VDD A;  2NU4 I;  1MT1 A;  4SGB I;  1CHO I;  1R0R I;  1HDL A;  2JZM A;  3TJQ A;  3SEK C;  1TUS A;  2ELI A;  2ERW A;  1RFH A;  2K9H A;  2SGD I;  1LR7 A;  2V1C A;  5FUX A;  5HI7 A;  2YQP A;  1LR9 A;  2KMR A;  2LEO A;  2KCX A;  2GVI A;  3UEJ A;  3B4V C;  1IW4 A;  3UGI A;  2V1C C;  2N71 A;  4GI3 C;  1TBR R;  1FAQ A;  5FUW A;  1M8C A;  1PTQ A;  2FNF X;  3SGQ I;  1KBF A;  1BMO A;  1TBQ R;  2E73 A;  2JA1 A;  2L8E A;  5CCL A;  1W3S A;  3OXL A;  1AN1 I;  1CGJ I;  4FKD A;  2LUY A;  1CT2 I;  2NU2 I;  1SGP I;  1YU6 C;  2JXD A;  4B6D A;  1PJU A;  1V1I A;  4HGU A;  2BUS A;  1W4R A;  3VDP A;  2CJS C;  2SGP I;  3VDU A;  2N1A B;  1SGE I;  1TBN A;  1TGS I;  2UZ3 A;  3HH2 C;  3RU0 A;  2B8T A;  1SGY I;  2ODD A;  3VE5 A;  3BJI A;  1IY5 A;  2OD1 A;  1CE3 A;  1FYB A;  2ORW A;  3MEK A;  1LR8 A;  2GKR I;  2NU1 I;  2QQE A;  2P6A C;  2ENZ A;  3GOX A;  1X4S A;  1CGI I;  2N17 A;  2ORV A;  2DB6 A;  3UGD A;  1TOT A;  1TBO A;  2SGF I;  2KMO A;  2L7X A;  4E1P A;  2V53 A;  2ROW A;  3UFF A;  1Y1C A;  3E59 A;  1PPF I;  1FAR A;  1DS2 I;  2OVO A;  1KBE A;  2NU3 I;  5FUV A;  1V1H A;  2NU0 I;  3UEY A;  1XBT A;  2WCY A;  5EX3 A;  2JYY A;  2J87 A;  2N52 A;  4A24 A;  2ARP F;  1CSO I;  2ENN A;  3PDN A;  1HJA I;  1SGQ I;  3D00 A;  3KY9 A;  3OXG A;  2QQC A;  2KMQ A;  1OYV I;  2J9R A;  1OMU A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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