2N52A

The solution structure of the kallikrein inhibitor spink6
Total Genus 14
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
14
sequence length
57
structure length
57
Chain Sequence
QGGQVDCGEFQDTKVYCTRESNPHCGSDGQTYGNKCAFCKAIVKSGGKISLKHPGKC
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Hydrolase inhibitor
molecule keywords Serine protease inhibitor Kazal-type 6
publication title The solution structure of the kallikrein-related peptidases inhibitor SPINK6.
pubmed doi rcsb
source organism Homo sapiens
total genus 14
structure length 57
sequence length 57
ec nomenclature
pdb deposition date 2015-07-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 2n52A00
3HH2C 1UVGA 1SGYI 4SGBI 2N71A 4OVOA 1LR9A 2NU0I 1OVOA 1PJUA 2QQCA 1TURA 2KMRA 2BUSA 1SGNI 1IW4A 5JHWC 1OMUA 1PPFI 2KMOA 1HDLA 3SGQI 2QQDA 2ARPF 2NU4I 2V53A 1SGQI 1TBRR 2NU2I 1TUSA 2OVOA 2JXDA 2SGFI 1HJAI 4HGUA 2LEOA 1CHOI 1Y1CA 3SEKC 1CGII 2KCXA 1YTPA 1CT0I 1SGEI 1CGJI 2GKVA 1DS2I 1NUBA 1Z7KB 3B4VC 1CT4I 1CE3A 1BMOA 1OMTA 2P6AC 3TJQA 1CT2I 1KMAA 3OVOA 1Y1BA 1AN1I 1YU6C 2JZMA 2N17A 1M8CA 1BUSA 2N52A 1HPTA 1MT1A 2KMQA 1DS3I 1OYVI 2GKRI 1IY5A 2KMPA 1TIHA 1UUCA 2SGDI 1FYBA 1SGDI 2ERWA 4GI3C 2F3CI 3QTLD 1PCEA 2NU1I 2SGPI 2M5XA 1LR8A 1R0RI 1UVFA 2SGQI 2XRCA 1CSOI 2NU3I 1IY6A 2SGEI 1N13A 1M8BA 1SGRI 5DAEA 2B0UC 2GKTI 1SGPI 1H0ZA 1TBQR 1LR7A 1TGSI 2JYYA 3SGBI 2WCYA
chains in the Genus database with same CATH superfamily
3HH2C 1UVGA 1WKXA 1FY7A 2QQEA 3OL0A 5E3PA 1SGYI 2CJSC 4SGBI 2N71A 1TBOA 4OVOA 5EX3A 1LR9A 4E1RA 2NU0I 3UFFA 1Q9BA 1OVOA 1PJUA 1ULNA 2QQCA 2ELIA 1WGCA 1RFHA 2FNFX 2X52A 5FUYA 3VE5A 1TURA 4AMLA 1S20A 2BUSA 2CWFA 1K7VA 1SGNI 1WGTA 2KMRA 5JHWC 1IW4A 1PTQA 1ULKA 1OMUA 1PPFI 2K9HA 2KMOA 2LUYA 1HDLA 3SGQI 2RC4A 1U5KA 4UXJA 1FAQA 2QQDA 3QAHA 2ARPF 2NU4I 2V53A 1SGQI 4L9MA 4DNCA 5EX0A 1PTRA 1TOTA 2ORWA 1TBRR 1K7TA 2N1AB 2NU2I 1W3SA 2QPOA 3UGDA 1TUSA 2CWHA 3UEYA 1KBFA 2OVOA 2JXDA 3CXLA 1V1HA 2SGFI 2Y0MA 3OXGA 3UOEA 1HJAI 4HGUA 1NXUA 2X3TA 2LEOA 1CHOI 2WGCA 3FC3A 1UHAA 3MEKA 3QWPA 1Y1CA 3SEKC 5CCMA 3GOXA 1CGII 2KCXA 1YTPA 3R5BA 3UGLA 1CT0I 2QQ0A 2W0TA 5FUXA 2ORVA 1SGEI 2CWGA 1CGJI 1V1IA 2GKVA 2L8EA 5E3QA 2YUUA 1KBEA 1DS2I 5HI7A 3KY9A 1NUBA 2ROWA 4MPIA 1Z7KB 1MJBA 1MJAA 1XX6A 1P9GA 4FKDA 3R5AA 3B4VC 1CT4I 1FARA 1XA6A 7WGAA 1CE3A 1BMOA 1MJ9A 2JW6A 2J9RA 1Y8FA 5J8CA 2J87A 2JA1A 3OXFA 1OMTA 2A20A 1X74A 2P6AC 3TJQA 1CT2I 1ULMA 3E2IA 3TO7A 3TOBA 3VDPA 2DKVA 5HQ8A 1KMAA 3OVOA 3FSXA 3RU0A 1Y1BA 2UZ3A 2WVJA 1AN1I 1YU6C 3UGIA 4E1PA 2OD1A 4WP4A 3D00A 2JZMA 3TO9A 2B8TA 2L7XA 2N17A 5FUWA 3VDUA 2UVOA 2WCYA 1M8CA 1R79A 4JCVE 2N52A 4A24A 1HPTA 2DIPA 1BUSA 2GIVA 9WGAA 1MT1A 2KMQA 3FSYA 1DS3I 2E5RA 1OYVI 1Z2IA 2GKRI 1IY5A 2V1CC 2KMPA 1TIHA 2ODDA 1UUCA 2OZUA 2SGDI 5CCLA 1FYBA 2RIJA 1SGDI 1VDDA 2ERWA 3R5DA 4GI3C 3BJIA 4UXHA 2VRWB 1XBTA 2F3CI 4UXIA 1X4SA 3QTLD 1PCEA 3R5CA 2NU1I 2SGPI 2M5XA 1LR8A 1R0RI 1UVFA 1WTJA 2SGQI 3TOAA 3E59A 1TBNA 5FUVA 2DB6A 2XRCA 1CSOI 5E3RA 2NU3I 3PDNA 1IY6A 2SGEI 3OXLA 1N13A 3TO6A 2E73A 1M8BA 2LB7A 2PQ8A 4B6DA 1SGRI 5DAEA 2ENZA 5J8FA 2GVIA 1P9ZA 2B0UC 2GKTI 1SGPI 2OU2A 2YQPA 1HEVA 2V1CA 1TBQR 1LR7A 1TGSI 2JYYA 1K7UA 3SGBI 1W4RA 1H0ZA 3UEJA 2ENNA
chains in the Genus database with same CATH topology
3HH2C 1UVGA 2QQEA 3OL0A 1SGYI 2CJSC 4SGBI 2N71A 1TBOA 4OVOA 5EX3A 1LR9A 4E1RA 2NU0I 1OVOA 1PJUA 2QQCA 2ELIA 1RFHA 2FNFX 3VE5A 5FUYA 5CCMA 1TURA 2KMRA 2BUSA 1SGNI 1IW4A 5JHWC 1PTQA 2K9HA 1OMUA 1PPFI 2KMOA 2LUYA 1HDLA 3SGQI 1U5KA 4UXJA 1FAQA 2QQDA 2ARPF 2NU4I 2V53A 1SGQI 4L9MA 5EX0A 1PTRA 1TOTA 2ORWA 1TBRR 2N1AB 2NU2I 1W3SA 2QPOA 3UGDA 1TUSA 3UEYA 1KBFA 2OVOA 2JXDA 3CXLA 1V1HA 2SGFI 3OXGA 1HJAI 4HGUA 2LEOA 1CHOI 3FC3A 3MEKA 3QWPA 1Y1CA 3SEKC 3GOXA 1CGII 2KCXA 1YTPA 3UGLA 1CT0I 2QQ0A 2W0TA 5FUXA 2ORVA 1SGEI 1CGJI 1V1IA 2GKVA 2L8EA 2YUUA 1KBEA 1DS2I 5HI7A 3KY9A 1NUBA 2ROWA 1Z7KB 1XX6A 4FKDA 3B4VC 1CT4I 1FARA 1XA6A 1CE3A 1BMOA 2JW6A 2J9RA 1Y8FA 2J87A 2JA1A 3OXFA 1OMTA 2A20A 1X74A 2P6AC 3TJQA 1CT2I 3E2IA 3VDPA 1KMAA 5HQ8A 3OVOA 3RU0A 1Y1BA 2UZ3A 2WVJA 1AN1I 1YU6C 3UGIA 4E1PA 2OD1A 3D00A 2JZMA 2B8TA 2L7XA 2N17A 5FUWA 3VDUA 4A24A 2WCYA 1M8CA 1R79A 4JCVE 2N52A 1BUSA 1HPTA 2DIPA 1MT1A 2KMQA 1DS3I 2E5RA 1OYVI 2GKRI 1IY5A 2V1CC 2KMPA 1TIHA 2ODDA 1UUCA 2SGDI 5CCLA 1FYBA 1SGDI 1VDDA 2ERWA 4GI3C 3BJIA 4UXHA 2VRWB 1XBTA 2F3CI 4UXIA 1X4SA 3QTLD 1PCEA 2NU1I 2SGPI 2M5XA 1LR8A 1R0RI 1UVFA 2SGQI 3E59A 1TBNA 5FUVA 2DB6A 2XRCA 1CSOI 2NU3I 3PDNA 1IY6A 2SGEI 3OXLA 1N13A 2E73A 1M8BA 4B6DA 1SGRI 5DAEA 2ENZA 2GVIA 2B0UC 2GKTI 1SGPI 2YQPA 2V1CA 1TBQR 1LR7A 1TGSI 2JYYA 3SGBI 3UFFA 1W4RA 1H0ZA 3UEJA 2ENNA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3HH2 C;  1UVG A;  1SGY I;  4SGB I;  2N71 A;  4OVO A;  1LR9 A;  2NU0 I;  1OVO A;  1PJU A;  2QQC A;  1TUR A;  2KMR A;  2BUS A;  1SGN I;  1IW4 A;  5JHW C;  1OMU A;  1PPF I;  2KMO A;  1HDL A;  3SGQ I;  2QQD A;  2ARP F;  2NU4 I;  2V53 A;  1SGQ I;  1TBR R;  2NU2 I;  1TUS A;  2OVO A;  2JXD A;  2SGF I;  1HJA I;  4HGU A;  2LEO A;  1CHO I;  1Y1C A;  3SEK C;  1CGI I;  2KCX A;  1YTP A;  1CT0 I;  1SGE I;  1CGJ I;  2GKV A;  1DS2 I;  1NUB A;  1Z7K B;  3B4V C;  1CT4 I;  1CE3 A;  1BMO A;  1OMT A;  2P6A C;  3TJQ A;  1CT2 I;  1KMA A;  3OVO A;  1Y1B A;  1AN1 I;  1YU6 C;  2JZM A;  2N17 A;  1M8C A;  1BUS A;  2N52 A;  1HPT A;  1MT1 A;  2KMQ A;  1DS3 I;  1OYV I;  2GKR I;  1IY5 A;  2KMP A;  1TIH A;  1UUC A;  2SGD I;  1FYB A;  1SGD I;  2ERW A;  4GI3 C;  2F3C I;  3QTL D;  1PCE A;  2NU1 I;  2SGP I;  2M5X A;  1LR8 A;  1R0R I;  1UVF A;  2SGQ I;  2XRC A;  1CSO I;  2NU3 I;  1IY6 A;  2SGE I;  1N13 A;  1M8B A;  1SGR I;  5DAE A;  2B0U C;  2GKT I;  1SGP I;  1H0Z A;  1TBQ R;  1LR7 A;  1TGS I;  2JYY A;  3SGB I;  2WCY A; 
#chains in the Genus database with same CATH topology
 3HH2 C;  1UVG A;  1WKX A;  1FY7 A;  2QQE A;  3OL0 A;  5E3P A;  1SGY I;  2CJS C;  4SGB I;  2N71 A;  1TBO A;  4OVO A;  5EX3 A;  1LR9 A;  4E1R A;  2NU0 I;  3UFF A;  1Q9B A;  1OVO A;  1PJU A;  1ULN A;  2QQC A;  2ELI A;  1WGC A;  1RFH A;  2FNF X;  2X52 A;  5FUY A;  3VE5 A;  1TUR A;  4AML A;  1S20 A;  2BUS A;  2CWF A;  1K7V A;  1SGN I;  1WGT A;  2KMR A;  5JHW C;  1IW4 A;  1PTQ A;  1ULK A;  1OMU A;  1PPF I;  2K9H A;  2KMO A;  2LUY A;  1HDL A;  3SGQ I;  2RC4 A;  1U5K A;  4UXJ A;  1FAQ A;  2QQD A;  3QAH A;  2ARP F;  2NU4 I;  2V53 A;  1SGQ I;  4L9M A;  4DNC A;  5EX0 A;  1PTR A;  1TOT A;  2ORW A;  1TBR R;  1K7T A;  2N1A B;  2NU2 I;  1W3S A;  2QPO A;  3UGD A;  1TUS A;  2CWH A;  3UEY A;  1KBF A;  2OVO A;  2JXD A;  3CXL A;  1V1H A;  2SGF I;  2Y0M A;  3OXG A;  3UOE A;  1HJA I;  4HGU A;  1NXU A;  2X3T A;  2LEO A;  1CHO I;  2WGC A;  3FC3 A;  1UHA A;  3MEK A;  3QWP A;  1Y1C A;  3SEK C;  5CCM A;  3GOX A;  1CGI I;  2KCX A;  1YTP A;  3R5B A;  3UGL A;  1CT0 I;  2QQ0 A;  2W0T A;  5FUX A;  2ORV A;  1SGE I;  2CWG A;  1CGJ I;  1V1I A;  2GKV A;  2L8E A;  5E3Q A;  2YUU A;  1KBE A;  1DS2 I;  5HI7 A;  3KY9 A;  1NUB A;  2ROW A;  4MPI A;  1Z7K B;  1MJB A;  1MJA A;  1XX6 A;  1P9G A;  4FKD A;  3R5A A;  3B4V C;  1CT4 I;  1FAR A;  1XA6 A;  7WGA A;  1CE3 A;  1BMO A;  1MJ9 A;  2JW6 A;  2J9R A;  1Y8F A;  5J8C A;  2J87 A;  2JA1 A;  3OXF A;  1OMT A;  2A20 A;  1X74 A;  2P6A C;  3TJQ A;  1CT2 I;  1ULM A;  3E2I A;  3TO7 A;  3TOB A;  3VDP A;  2DKV A;  5HQ8 A;  1KMA A;  3OVO A;  3FSX A;  3RU0 A;  1Y1B A;  2UZ3 A;  2WVJ A;  1AN1 I;  1YU6 C;  3UGI A;  4E1P A;  2OD1 A;  4WP4 A;  3D00 A;  2JZM A;  3TO9 A;  2B8T A;  2L7X A;  2N17 A;  5FUW A;  3VDU A;  2UVO A;  2WCY A;  1M8C A;  1R79 A;  4JCV E;  2N52 A;  4A24 A;  1HPT A;  2DIP A;  1BUS A;  2GIV A;  9WGA A;  1MT1 A;  2KMQ A;  3FSY A;  1DS3 I;  2E5R A;  1OYV I;  1Z2I A;  2GKR I;  1IY5 A;  2V1C C;  2KMP A;  1TIH A;  2ODD A;  1UUC A;  2OZU A;  2SGD I;  5CCL A;  1FYB A;  2RIJ A;  1SGD I;  1VDD A;  2ERW A;  3R5D A;  4GI3 C;  3BJI A;  4UXH A;  2VRW B;  1XBT A;  2F3C I;  4UXI A;  1X4S A;  3QTL D;  1PCE A;  3R5C A;  2NU1 I;  2SGP I;  2M5X A;  1LR8 A;  1R0R I;  1UVF A;  1WTJ A;  2SGQ I;  3TOA A;  3E59 A;  1TBN A;  5FUV A;  2DB6 A;  2XRC A;  1CSO I;  5E3R A;  2NU3 I;  3PDN A;  1IY6 A;  2SGE I;  3OXL A;  1N13 A;  3TO6 A;  2E73 A;  1M8B A;  2LB7 A;  2PQ8 A;  4B6D A;  1SGR I;  5DAE A;  2ENZ A;  5J8F A;  2GVI A;  1P9Z A;  2B0U C;  2GKT I;  1SGP I;  2OU2 A;  2YQP A;  1HEV A;  2V1C A;  1TBQ R;  1LR7 A;  1TGS I;  2JYY A;  1K7U A;  3SGB I;  1W4R A;  1H0Z A;  3UEJ A;  2ENN A; 
#chains in the Genus database with same CATH homology
 3HH2 C;  1UVG A;  2QQE A;  3OL0 A;  1SGY I;  2CJS C;  4SGB I;  2N71 A;  1TBO A;  4OVO A;  5EX3 A;  1LR9 A;  4E1R A;  2NU0 I;  1OVO A;  1PJU A;  2QQC A;  2ELI A;  1RFH A;  2FNF X;  3VE5 A;  5FUY A;  5CCM A;  1TUR A;  2KMR A;  2BUS A;  1SGN I;  1IW4 A;  5JHW C;  1PTQ A;  2K9H A;  1OMU A;  1PPF I;  2KMO A;  2LUY A;  1HDL A;  3SGQ I;  1U5K A;  4UXJ A;  1FAQ A;  2QQD A;  2ARP F;  2NU4 I;  2V53 A;  1SGQ I;  4L9M A;  5EX0 A;  1PTR A;  1TOT A;  2ORW A;  1TBR R;  2N1A B;  2NU2 I;  1W3S A;  2QPO A;  3UGD A;  1TUS A;  3UEY A;  1KBF A;  2OVO A;  2JXD A;  3CXL A;  1V1H A;  2SGF I;  3OXG A;  1HJA I;  4HGU A;  2LEO A;  1CHO I;  3FC3 A;  3MEK A;  3QWP A;  1Y1C A;  3SEK C;  3GOX A;  1CGI I;  2KCX A;  1YTP A;  3UGL A;  1CT0 I;  2QQ0 A;  2W0T A;  5FUX A;  2ORV A;  1SGE I;  1CGJ I;  1V1I A;  2GKV A;  2L8E A;  2YUU A;  1KBE A;  1DS2 I;  5HI7 A;  3KY9 A;  1NUB A;  2ROW A;  1Z7K B;  1XX6 A;  4FKD A;  3B4V C;  1CT4 I;  1FAR A;  1XA6 A;  1CE3 A;  1BMO A;  2JW6 A;  2J9R A;  1Y8F A;  2J87 A;  2JA1 A;  3OXF A;  1OMT A;  2A20 A;  1X74 A;  2P6A C;  3TJQ A;  1CT2 I;  3E2I A;  3VDP A;  1KMA A;  5HQ8 A;  3OVO A;  3RU0 A;  1Y1B A;  2UZ3 A;  2WVJ A;  1AN1 I;  1YU6 C;  3UGI A;  4E1P A;  2OD1 A;  3D00 A;  2JZM A;  2B8T A;  2L7X A;  2N17 A;  5FUW A;  3VDU A;  4A24 A;  2WCY A;  1M8C A;  1R79 A;  4JCV E;  2N52 A;  1BUS A;  1HPT A;  2DIP A;  1MT1 A;  2KMQ A;  1DS3 I;  2E5R A;  1OYV I;  2GKR I;  1IY5 A;  2V1C C;  2KMP A;  1TIH A;  2ODD A;  1UUC A;  2SGD I;  5CCL A;  1FYB A;  1SGD I;  1VDD A;  2ERW A;  4GI3 C;  3BJI A;  4UXH A;  2VRW B;  1XBT A;  2F3C I;  4UXI A;  1X4S A;  3QTL D;  1PCE A;  2NU1 I;  2SGP I;  2M5X A;  1LR8 A;  1R0R I;  1UVF A;  2SGQ I;  3E59 A;  1TBN A;  5FUV A;  2DB6 A;  2XRC A;  1CSO I;  2NU3 I;  3PDN A;  1IY6 A;  2SGE I;  3OXL A;  1N13 A;  2E73 A;  1M8B A;  4B6D A;  1SGR I;  5DAE A;  2ENZ A;  2GVI A;  2B0U C;  2GKT I;  1SGP I;  2YQP A;  2V1C A;  1TBQ R;  1LR7 A;  1TGS I;  2JYY A;  3SGB I;  3UFF A;  1W4R A;  1H0Z A;  3UEJ A;  2ENN A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...