1TUSA

Solution structure of reactive-site hydrolyzed turkey ovomucoid third domain by nuclear magnetic resonance and distance geometry methods
Total Genus 8
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
8
sequence length
56
structure length
56
Chain Sequence
LAAVSVDCSEYPKPACTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Solution structure of reactive-site hydrolyzed turkey ovomucoid third domain by nuclear magnetic resonance and distance geometry methods.
pubmed doi rcsb
source organism Meleagris gallopavo
molecule tags Serine proteinase inhibitor
molecule keywords OVOMUCOID
total genus 8
structure length 56
sequence length 56
ec nomenclature
pdb deposition date 1994-07-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1tusA00
3SGBI 2ERWA 1CSOI 2NU1I 2SGQI 2XRCA 1CT2I 4SGBI 1LR8A 2SGFI 2NU2I 2JYYA 1Y1BA 2SGPI 1BUSA 4GI3C 2KCXA 2NU3I 1HDLA 1CT4I 2OVOA 2GKTI 1DS2I 1M8BA 5JHWC 2QQCA 1OMTA 3HH2C 1YU6C 1LR9A 3OVOA 2SGEI 2KMRA 2N17A 2N52A 1OMUA 3QTLD 2ARPF 2LEOA 1TBQR 4OVOA 2KMOA 1MT1A 3TJQA 2V53A 2GKRI 2GKVA 2P6AC 1R0RI 2NU0I 1UVFA 2SGDI 1PCEA 1Y1CA 1SGQI 1FYBA 2QQDA 1UVGA 1SGPI 1CE3A 1BMOA 1SGDI 1KMAA 1YTPA 1TURA 1CT0I 1DS3I 1OVOA 1UUCA 1PPFI 2N71A 2NU4I 1N13A 1LR7A 5DAEA 1SGYI 2BUSA 4HGUA 2KMQA 1H0ZA 1TIHA 1NUBA 1SGNI 1OYVI 1SGRI 2B0UC 3SEKC 1AN1I 1HPTA 1SGEI 1IY5A 2WCYA 1CGII 2JXDA 3SGQI 1IY6A 1TBRR 2JZMA 1IW4A 1CGJI 1M8CA 2F3CI 1TGSI 1CHOI 3B4VC 1Z7KB 2M5XA 1TUSA 1HJAI 2KMPA 1PJUA
chains in the Genus database with same CATH superfamily
5CCLA 3SGBI 1Z2IA 2ERWA 2OZUA 2K9HA 1FARA 1CSOI 2GVIA 1ULKA 2NU1I 2SGQI 1R79A 2XRCA 1CT2I 1KBFA 4SGBI 1XA6A 3TO9A 1LR8A 2SGFI 3MEKA 3FC3A 3UGIA 2JYYA 2NU2I 1ULNA 2WGCA 3KY9A 1PTRA 1Y1BA 2JA1A 4AMLA 1MJ9A 2SGPI 2V1CC 2ENZA 3UOEA 1BUSA 4GI3C 1V1HA 2KCXA 2ELIA 2NU3I 2RIJA 3OXFA 5HQ8A 1HDLA 1MJAA 2UZ3A 2QPOA 1CT4I 1TBNA 4E1PA 2OVOA 1Q9BA 2GKTI 1K7VA 1X74A 3OXLA 1DS2I 1M8BA 5JHWC 2QQCA 3VDPA 1XX6A 3D00A 5J8FA 2CWFA 1OMTA 3HH2C 2CWHA 2Y0MA 1YU6C 3OXGA 5J8CA 5E3RA 1UHAA 3TO6A 1LR9A 5EX0A 3OVOA 2SGEI 2KMRA 2N17A 2N52A 4L9MA 3TO7A 2J9RA 3GOXA 3PDNA 1X4SA 2LB7A 1OMUA 2CWGA 3R5AA 2J87A 3R5CA 2N1AB 1WKXA 3QTLD 1K7TA 7WGAA 2ARPF 2LEOA 2VRWB 1TBQR 4OVOA 2KMOA 1MT1A 3TJQA 2V53A 2UVOA 1P9ZA 4DNCA 2DIPA 2JW6A 2GKRI 2LUYA 2GKVA 2P6AC 1R0RI 2W0TA 2NU0I 1HEVA 1VDDA 2X3TA 1UVFA 2SGDI 3RU0A 1KBEA 9WGAA 3BJIA 2V1CA 5E3PA 4MPIA 1PCEA 1WTJA 1Y1CA 1SGQI 1W3SA 2QQ0A 4UXJA 3UEYA 2GIVA 1TOTA 1U5KA 1WGTA 2A20A 5HI7A 2ROWA 2QQDA 1FYBA 4FKDA 4JCVE 2ODDA 1UVGA 3VE5A 1WGCA 1SGPI 2CJSC 1CE3A 2ENNA 5E3QA 1FAQA 1BMOA 1SGDI 2QQEA 1RFHA 1KMAA 1YTPA 1TURA 2ORWA 1CT0I 5EX3A 1DS3I 3UFFA 1OVOA 1UUCA 1PPFI 2N71A 2PQ8A 4A24A 2WVJA 1MJBA 3R5DA 3UEJA 2NU4I 1N13A 1LR7A 2X52A 3E2IA 4WP4A 1SGYI 1W4RA 3E59A 5DAEA 1FY7A 2B8TA 2BUSA 4HGUA 2KMQA 1H0ZA 1TIHA 2E5RA 1NUBA 1SGNI 1OYVI 1SGRI 2OD1A 1TBOA 4UXHA 2B0UC 3SEKC 1S20A 1AN1I 1HPTA 3OL0A 1SGEI 1IY5A 2WCYA 2ORVA 3UGDA 1CGII 2JXDA 2DB6A 1XBTA 2DKVA 1Y8FA 3R5BA 3UGLA 2OU2A 1ULMA 2RC4A 3SGQI 1IY6A 1TBRR 2L7XA 2JZMA 3VDUA 1IW4A 2YUUA 1CGJI 1V1IA 1M8CA 2F3CI 1PTQA 1K7UA 2YQPA 1TGSI 1CHOI 3B4VC 5FUYA 2E73A 2L8EA 4UXIA 1P9GA 4B6DA 3TOAA 5FUXA 3FSXA 3TOBA 3CXLA 5FUWA 1Z7KB 2M5XA 1TUSA 5CCMA 3QWPA 2FNFX 5FUVA 3QAHA 4E1RA 1HJAI 3FSYA 2KMPA 1PJUA 1NXUA
chains in the Genus database with same CATH topology
5CCLA 3SGBI 2ERWA 2K9HA 1FARA 1CSOI 2GVIA 2NU1I 2SGQI 1R79A 2XRCA 1CT2I 1KBFA 4SGBI 1XA6A 1LR8A 2SGFI 3MEKA 3FC3A 3UGIA 2JYYA 2NU2I 3KY9A 1PTRA 1Y1BA 2JA1A 2V1CC 2SGPI 2ENZA 1BUSA 4GI3C 1V1HA 2KCXA 2ELIA 2NU3I 3OXFA 5HQ8A 1HDLA 2UZ3A 2QPOA 1CT4I 1TBNA 4E1PA 2OVOA 2GKTI 1X74A 3OXLA 1DS2I 1M8BA 5JHWC 2QQCA 3VDPA 1XX6A 3D00A 1OMTA 3HH2C 1YU6C 3OXGA 1LR9A 5EX0A 3OVOA 2SGEI 2KMRA 2N17A 2N52A 4L9MA 2J9RA 3GOXA 3PDNA 1X4SA 1OMUA 2J87A 2N1AB 3QTLD 2ARPF 2LEOA 2VRWB 1TBQR 4OVOA 2KMOA 1MT1A 3TJQA 2V53A 2DIPA 2JW6A 2GKRI 2LUYA 2GKVA 2P6AC 1R0RI 2W0TA 2NU0I 1VDDA 1UVFA 2SGDI 3RU0A 1KBEA 3BJIA 2V1CA 1PCEA 1Y1CA 1SGQI 1W3SA 2QQ0A 4UXJA 3UEYA 1TOTA 1U5KA 2A20A 5HI7A 2ROWA 2QQDA 1FYBA 4FKDA 4JCVE 2ODDA 1UVGA 3VE5A 1SGPI 2CJSC 1CE3A 2ENNA 1FAQA 1BMOA 1SGDI 2QQEA 1RFHA 1KMAA 1YTPA 1TURA 2ORWA 1CT0I 5EX3A 1DS3I 3UFFA 1OVOA 1UUCA 1PPFI 2N71A 4A24A 2WVJA 3UEJA 2NU4I 1N13A 1LR7A 3E2IA 5DAEA 1SGYI 1W4RA 3E59A 2B8TA 2BUSA 4HGUA 2KMQA 1H0ZA 1TIHA 2E5RA 1NUBA 1SGNI 1OYVI 1SGRI 2OD1A 1TBOA 4UXHA 2B0UC 3SEKC 1AN1I 1HPTA 3OL0A 1SGEI 1IY5A 2WCYA 2ORVA 3UGDA 1CGII 2JXDA 2DB6A 1XBTA 1Y8FA 3UGLA 3SGQI 1IY6A 1TBRR 2L7XA 2JZMA 3VDUA 1IW4A 2YUUA 1CGJI 1V1IA 1M8CA 2F3CI 1PTQA 2YQPA 1TGSI 1CHOI 3B4VC 5FUYA 2E73A 2L8EA 4UXIA 4B6DA 5FUXA 3CXLA 5FUWA 1Z7KB 2M5XA 1TUSA 5CCMA 3QWPA 2FNFX 5FUVA 4E1RA 1HJAI 2KMPA 1PJUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3SGB I;  2ERW A;  1CSO I;  2NU1 I;  2SGQ I;  2XRC A;  1CT2 I;  4SGB I;  1LR8 A;  2SGF I;  2NU2 I;  2JYY A;  1Y1B A;  2SGP I;  1BUS A;  4GI3 C;  2KCX A;  2NU3 I;  1HDL A;  1CT4 I;  2OVO A;  2GKT I;  1DS2 I;  1M8B A;  5JHW C;  2QQC A;  1OMT A;  3HH2 C;  1YU6 C;  1LR9 A;  3OVO A;  2SGE I;  2KMR A;  2N17 A;  2N52 A;  1OMU A;  3QTL D;  2ARP F;  2LEO A;  1TBQ R;  4OVO A;  2KMO A;  1MT1 A;  3TJQ A;  2V53 A;  2GKR I;  2GKV A;  2P6A C;  1R0R I;  2NU0 I;  1UVF A;  2SGD I;  1PCE A;  1Y1C A;  1SGQ I;  1FYB A;  2QQD A;  1UVG A;  1SGP I;  1CE3 A;  1BMO A;  1SGD I;  1KMA A;  1YTP A;  1TUR A;  1CT0 I;  1DS3 I;  1OVO A;  1UUC A;  1PPF I;  2N71 A;  2NU4 I;  1N13 A;  1LR7 A;  5DAE A;  1SGY I;  2BUS A;  4HGU A;  2KMQ A;  1H0Z A;  1TIH A;  1NUB A;  1SGN I;  1OYV I;  1SGR I;  2B0U C;  3SEK C;  1AN1 I;  1HPT A;  1SGE I;  1IY5 A;  2WCY A;  1CGI I;  2JXD A;  3SGQ I;  1IY6 A;  1TBR R;  2JZM A;  1IW4 A;  1CGJ I;  1M8C A;  2F3C I;  1TGS I;  1CHO I;  3B4V C;  1Z7K B;  2M5X A;  1TUS A;  1HJA I;  2KMP A;  1PJU A; 
#chains in the Genus database with same CATH topology
 5CCL A;  3SGB I;  1Z2I A;  2ERW A;  2OZU A;  2K9H A;  1FAR A;  1CSO I;  2GVI A;  1ULK A;  2NU1 I;  2SGQ I;  1R79 A;  2XRC A;  1CT2 I;  1KBF A;  4SGB I;  1XA6 A;  3TO9 A;  1LR8 A;  2SGF I;  3MEK A;  3FC3 A;  3UGI A;  2JYY A;  2NU2 I;  1ULN A;  2WGC A;  3KY9 A;  1PTR A;  1Y1B A;  2JA1 A;  4AML A;  1MJ9 A;  2SGP I;  2V1C C;  2ENZ A;  3UOE A;  1BUS A;  4GI3 C;  1V1H A;  2KCX A;  2ELI A;  2NU3 I;  2RIJ A;  3OXF A;  5HQ8 A;  1HDL A;  1MJA A;  2UZ3 A;  2QPO A;  1CT4 I;  1TBN A;  4E1P A;  2OVO A;  1Q9B A;  2GKT I;  1K7V A;  1X74 A;  3OXL A;  1DS2 I;  1M8B A;  5JHW C;  2QQC A;  3VDP A;  1XX6 A;  3D00 A;  5J8F A;  2CWF A;  1OMT A;  3HH2 C;  2CWH A;  2Y0M A;  1YU6 C;  3OXG A;  5J8C A;  5E3R A;  1UHA A;  3TO6 A;  1LR9 A;  5EX0 A;  3OVO A;  2SGE I;  2KMR A;  2N17 A;  2N52 A;  4L9M A;  3TO7 A;  2J9R A;  3GOX A;  3PDN A;  1X4S A;  2LB7 A;  1OMU A;  2CWG A;  3R5A A;  2J87 A;  3R5C A;  2N1A B;  1WKX A;  3QTL D;  1K7T A;  7WGA A;  2ARP F;  2LEO A;  2VRW B;  1TBQ R;  4OVO A;  2KMO A;  1MT1 A;  3TJQ A;  2V53 A;  2UVO A;  1P9Z A;  4DNC A;  2DIP A;  2JW6 A;  2GKR I;  2LUY A;  2GKV A;  2P6A C;  1R0R I;  2W0T A;  2NU0 I;  1HEV A;  1VDD A;  2X3T A;  1UVF A;  2SGD I;  3RU0 A;  1KBE A;  9WGA A;  3BJI A;  2V1C A;  5E3P A;  4MPI A;  1PCE A;  1WTJ A;  1Y1C A;  1SGQ I;  1W3S A;  2QQ0 A;  4UXJ A;  3UEY A;  2GIV A;  1TOT A;  1U5K A;  1WGT A;  2A20 A;  5HI7 A;  2ROW A;  2QQD A;  1FYB A;  4FKD A;  4JCV E;  2ODD A;  1UVG A;  3VE5 A;  1WGC A;  1SGP I;  2CJS C;  1CE3 A;  2ENN A;  5E3Q A;  1FAQ A;  1BMO A;  1SGD I;  2QQE A;  1RFH A;  1KMA A;  1YTP A;  1TUR A;  2ORW A;  1CT0 I;  5EX3 A;  1DS3 I;  3UFF A;  1OVO A;  1UUC A;  1PPF I;  2N71 A;  2PQ8 A;  4A24 A;  2WVJ A;  1MJB A;  3R5D A;  3UEJ A;  2NU4 I;  1N13 A;  1LR7 A;  2X52 A;  3E2I A;  4WP4 A;  1SGY I;  1W4R A;  3E59 A;  5DAE A;  1FY7 A;  2B8T A;  2BUS A;  4HGU A;  2KMQ A;  1H0Z A;  1TIH A;  2E5R A;  1NUB A;  1SGN I;  1OYV I;  1SGR I;  2OD1 A;  1TBO A;  4UXH A;  2B0U C;  3SEK C;  1S20 A;  1AN1 I;  1HPT A;  3OL0 A;  1SGE I;  1IY5 A;  2WCY A;  2ORV A;  3UGD A;  1CGI I;  2JXD A;  2DB6 A;  1XBT A;  2DKV A;  1Y8F A;  3R5B A;  3UGL A;  2OU2 A;  1ULM A;  2RC4 A;  3SGQ I;  1IY6 A;  1TBR R;  2L7X A;  2JZM A;  3VDU A;  1IW4 A;  2YUU A;  1CGJ I;  1V1I A;  1M8C A;  2F3C I;  1PTQ A;  1K7U A;  2YQP A;  1TGS I;  1CHO I;  3B4V C;  5FUY A;  2E73 A;  2L8E A;  4UXI A;  1P9G A;  4B6D A;  3TOA A;  5FUX A;  3FSX A;  3TOB A;  3CXL A;  5FUW A;  1Z7K B;  2M5X A;  1TUS A;  5CCM A;  3QWP A;  2FNF X;  5FUV A;  3QAH A;  4E1R A;  1HJA I;  3FSY A;  2KMP A;  1PJU A;  1NXU A; 
#chains in the Genus database with same CATH homology
 5CCL A;  3SGB I;  2ERW A;  2K9H A;  1FAR A;  1CSO I;  2GVI A;  2NU1 I;  2SGQ I;  1R79 A;  2XRC A;  1CT2 I;  1KBF A;  4SGB I;  1XA6 A;  1LR8 A;  2SGF I;  3MEK A;  3FC3 A;  3UGI A;  2JYY A;  2NU2 I;  3KY9 A;  1PTR A;  1Y1B A;  2JA1 A;  2V1C C;  2SGP I;  2ENZ A;  1BUS A;  4GI3 C;  1V1H A;  2KCX A;  2ELI A;  2NU3 I;  3OXF A;  5HQ8 A;  1HDL A;  2UZ3 A;  2QPO A;  1CT4 I;  1TBN A;  4E1P A;  2OVO A;  2GKT I;  1X74 A;  3OXL A;  1DS2 I;  1M8B A;  5JHW C;  2QQC A;  3VDP A;  1XX6 A;  3D00 A;  1OMT A;  3HH2 C;  1YU6 C;  3OXG A;  1LR9 A;  5EX0 A;  3OVO A;  2SGE I;  2KMR A;  2N17 A;  2N52 A;  4L9M A;  2J9R A;  3GOX A;  3PDN A;  1X4S A;  1OMU A;  2J87 A;  2N1A B;  3QTL D;  2ARP F;  2LEO A;  2VRW B;  1TBQ R;  4OVO A;  2KMO A;  1MT1 A;  3TJQ A;  2V53 A;  2DIP A;  2JW6 A;  2GKR I;  2LUY A;  2GKV A;  2P6A C;  1R0R I;  2W0T A;  2NU0 I;  1VDD A;  1UVF A;  2SGD I;  3RU0 A;  1KBE A;  3BJI A;  2V1C A;  1PCE A;  1Y1C A;  1SGQ I;  1W3S A;  2QQ0 A;  4UXJ A;  3UEY A;  1TOT A;  1U5K A;  2A20 A;  5HI7 A;  2ROW A;  2QQD A;  1FYB A;  4FKD A;  4JCV E;  2ODD A;  1UVG A;  3VE5 A;  1SGP I;  2CJS C;  1CE3 A;  2ENN A;  1FAQ A;  1BMO A;  1SGD I;  2QQE A;  1RFH A;  1KMA A;  1YTP A;  1TUR A;  2ORW A;  1CT0 I;  5EX3 A;  1DS3 I;  3UFF A;  1OVO A;  1UUC A;  1PPF I;  2N71 A;  4A24 A;  2WVJ A;  3UEJ A;  2NU4 I;  1N13 A;  1LR7 A;  3E2I A;  5DAE A;  1SGY I;  1W4R A;  3E59 A;  2B8T A;  2BUS A;  4HGU A;  2KMQ A;  1H0Z A;  1TIH A;  2E5R A;  1NUB A;  1SGN I;  1OYV I;  1SGR I;  2OD1 A;  1TBO A;  4UXH A;  2B0U C;  3SEK C;  1AN1 I;  1HPT A;  3OL0 A;  1SGE I;  1IY5 A;  2WCY A;  2ORV A;  3UGD A;  1CGI I;  2JXD A;  2DB6 A;  1XBT A;  1Y8F A;  3UGL A;  3SGQ I;  1IY6 A;  1TBR R;  2L7X A;  2JZM A;  3VDU A;  1IW4 A;  2YUU A;  1CGJ I;  1V1I A;  1M8C A;  2F3C I;  1PTQ A;  2YQP A;  1TGS I;  1CHO I;  3B4V C;  5FUY A;  2E73 A;  2L8E A;  4UXI A;  4B6D A;  5FUX A;  3CXL A;  5FUW A;  1Z7K B;  2M5X A;  1TUS A;  5CCM A;  3QWP A;  2FNF X;  5FUV A;  4E1R A;  1HJA I;  2KMP A;  1PJU A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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