1TUSA

Solution structure of reactive-site hydrolyzed turkey ovomucoid third domain by nuclear magnetic resonance and distance geometry methods
Total Genus 8
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
8
sequence length
56
structure length
56
Chain Sequence
b'LAAVSVDCSEYPKPACTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords OVOMUCOID
publication title Solution structure of reactive-site hydrolyzed turkey ovomucoid third domain by nuclear magnetic resonance and distance geometry methods.
pubmed doi rcsb
source organism Meleagris gallopavo
molecule tags Serine proteinase inhibitor
total genus 8
structure length 56
sequence length 56
ec nomenclature
pdb deposition date 1994-07-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1tusA00
1TURA 2SGFI 2F3CI 1CGJI 2QQDA 2KCXA 2LEOA 2QQCA 1PCEA 1HJAI 1AN1I 1HDLA 2WCYA 5DAEA 1M8CA 2N71A 1M8BA 4GI3C 1OMTA 1UVGA 2M5XA 1CHOI 1SGYI 1TIHA 1IY6A 2OVOA 3SGBI 4OVOA 1IW4A 1Y1BA 1SGEI 2KMQA 2GKRI 1BMOA 2NU3I 2NU0I 1CT0I 2NU4I 2KMRA 1H0ZA 1KMAA 1MT1A 2SGDI 1TGSI 1UVFA 1SGPI 1CGII 1CT2I 1LR8A 2NU1I 1Y1CA 3HH2C 2SGQI 3SGQI 2N17A 1TUSA 2GKTI 3SEKC 2SGEI 1N13A 1PJUA 2JZMA 1SGNI 5JHWC 1NUBA 1YTPA 2P6AC 2JYYA 1R0RI 1SGQI 2ERWA 1TBQR 1CSOI 1SGDI 2GKVA 1TBRR 1Z7KB 3TJQA 1DS3I 1UUCA 3B4VC 4HGUA 1CE3A 1SGRI 2KMPA 2ARPF 2KMOA 2XRCA 1YU6C 2JXDA 1PPFI 2V53A 1LR9A 1OMUA 2NU2I 2N52A 2SGPI 3OVOA 3QTLD 4SGBI 1IY5A 1FYBA 1OYVI 1LR7A 1DS2I 2BUSA 1OVOA 2B0UC 1HPTA 1BUSA 1CT4I
chains in the Genus database with same CATH superfamily
1TURA 2SGFI 5HI7A 2F3CI 1X74A 2L8EA 1CGJI 3TOBA 2QQDA 1CT4I 1KBFA 1TBNA 2ORVA 3TO7A 3UGDA 1ULNA 1XA6A 4MPIA 2PQ8A 3VDUA 1FARA 2UVOA 1V1HA 2OU2A 3UFFA 2KCXA 2GVIA 2J87A 2LEOA 1PCEA 2QQCA 5FUVA 2GIVA 1HJAI 1AN1I 1HDLA 2WCYA 5DAEA 3VDPA 2W0TA 2N71A 1M8BA 2JW6A 3CXLA 1V1IA 4GI3C 1MJAA 3OL0A 2N1AB 2RC4A 3TO9A 3R5DA 1OMTA 3UGIA 5HQ8A 1UVGA 3R5CA 2E73A 1BUSA 2M5XA 1CHOI 5E3RA 2ELIA 1K7UA 1SGYI 2OZUA 2CWHA 5EX0A 4E1PA 1TIHA 2WVJA 1IY6A 2OVOA 4AMLA 1Q9BA 4UXHA 4UXIA 3SGBI 4OVOA 3TO6A 3FSYA 1NXUA 4B6DA 1Y1BA 2JA1A 5CCLA 1IW4A 1KBEA 1Y8FA 2E5RA 2ORWA 2WGCA 1SGEI 2J9RA 2KMQA 1MJBA 2GKRI 1BMOA 2NU3I 2NU0I 2ODDA 2QQEA 1PTQA 2OD1A 1CT0I 2NU4I 2V1CA 3E2IA 1WKXA 2YUUA 2KMRA 1H0ZA 1KMAA 2A20A 1UHAA 2QPOA 2Y0MA 1MT1A 2QQ0A 4UXJA 1R79A 2X3TA 2SGDI 1TGSI 3MEKA 5FUWA 1S20A 1UVFA 3E59A 1P9GA 1CGII 1SGPI 5FUYA 2ROWA 1XBTA 1W3SA 1CT2I 5FUXA 5CCMA 1P9ZA 4FKDA 1LR8A 3UEYA 2NU1I 1X4SA 4L9MA 4DNCA 3UGLA 1WGTA 1Y1CA 3HH2C 3QWPA 1ULKA 2UZ3A 2SGQI 3R5BA 3SGQI 3UEJA 3OXFA 5J8CA 3UOEA 2N17A 1TUSA 1PTRA 2B8TA 2GKTI 3SEKC 2SGEI 1N13A 3TOAA 5E3QA 1PJUA 2JZMA 3VE5A 3PDNA 3R5AA 1SGNI 2DIPA 5JHWC 2CWFA 2CWGA 3OXGA 1NUBA 1YTPA 2K9HA 2LUYA 2P6AC 2CJSC 1U5KA 2JYYA 2L7XA 3FC3A 1R0RI 1SGQI 2ERWA 4JCVE 3QAHA 1K7VA 2VRWB 1TBQR 3KY9A 4E1RA 1TOTA 1CSOI 1SGDI 2ENNA 2FNFX 1FY7A 1K7TA 3RU0A 1XX6A 7WGAA 1FAQA 1ULMA 2GKVA 2YQPA 3BJIA 1TBRR 1Z7KB 3TJQA 1DS3I 2V1CC 1RFHA 3GOXA 4A24A 1UUCA 5J8FA 1WTJA 3B4VC 5E3PA 4HGUA 3FSXA 1SGRI 2KMPA 1CE3A 1HEVA 1MJ9A 2RIJA 2ARPF 2KMOA 2X52A 2XRCA 1YU6C 2JXDA 2DKVA 1PPFI 1W4RA 1LR9A 1OMUA 2NU2I 2N52A 2SGPI 2V53A 3OVOA 3QTLD 1IY5A 4SGBI 1FYBA 1OYVI 1Z2IA 1VDDA 2DB6A 3OXLA 1LR7A 1DS2I 1WGCA 2BUSA 5EX3A 1TBOA 1OVOA 2ENZA 4WP4A 2LB7A 2B0UC 1HPTA 9WGAA 1M8CA 3D00A
chains in the Genus database with same CATH topology
1TURA 2SGFI 5HI7A 2F3CI 1X74A 2L8EA 1CGJI 2QQDA 1KBFA 1TBNA 2ORVA 3UGDA 1XA6A 1FARA 1V1HA 3UFFA 2KCXA 2GVIA 2J87A 2LEOA 1PCEA 2QQCA 5FUVA 1HJAI 1AN1I 1HDLA 2WCYA 5DAEA 1M8CA 3VDPA 2W0TA 2N71A 1M8BA 2JW6A 3CXLA 1V1IA 4GI3C 3OL0A 2N1AB 3UGIA 1OMTA 5HQ8A 1UVGA 2E73A 2M5XA 1CHOI 2ELIA 1SGYI 5EX0A 4E1PA 1TIHA 2WVJA 1IY6A 2OVOA 4UXHA 4UXIA 3SGBI 4OVOA 4B6DA 5CCLA 1IW4A 1Y1BA 2JA1A 1KBEA 1Y8FA 2E5RA 2ORWA 1SGEI 2J9RA 2KMQA 2GKRI 1BMOA 2NU3I 2NU0I 2ODDA 2QQEA 1PTQA 2OD1A 1CT0I 2NU4I 2V1CA 3E2IA 2YUUA 2KMRA 1H0ZA 1KMAA 2A20A 4UXJA 2QPOA 1MT1A 2QQ0A 1R79A 2SGDI 1TGSI 3MEKA 5FUWA 1UVFA 3E59A 1SGPI 1CGII 5FUYA 2ROWA 1XBTA 1W3SA 1CT2I 5FUXA 5CCMA 4FKDA 1LR8A 3UEYA 2NU1I 1X4SA 4L9MA 3UGLA 1Y1CA 3HH2C 3QWPA 2UZ3A 2SGQI 3SGQI 3UEJA 3OXFA 2N17A 1TUSA 1PTRA 2B8TA 2GKTI 3SEKC 2SGEI 1N13A 1PJUA 2JZMA 3VE5A 3PDNA 1SGNI 2DIPA 5JHWC 3OXGA 1NUBA 1YTPA 2K9HA 2LUYA 2P6AC 2CJSC 1U5KA 2JYYA 2L7XA 3FC3A 1R0RI 1SGQI 2ERWA 4JCVE 2VRWB 3KY9A 1TBQR 4E1RA 1TOTA 1CSOI 1SGDI 2ENNA 2FNFX 3RU0A 1XX6A 1FAQA 2GKVA 2YQPA 3BJIA 1TBRR 1Z7KB 3TJQA 1DS3I 2V1CC 1RFHA 3GOXA 4A24A 1UUCA 3B4VC 4HGUA 1CE3A 1SGRI 2KMPA 2ARPF 2KMOA 2XRCA 1YU6C 2JXDA 1PPFI 1W4RA 1LR9A 1OMUA 2NU2I 2N52A 2SGPI 2V53A 3OVOA 3QTLD 1IY5A 4SGBI 1FYBA 1OYVI 1VDDA 2DB6A 3OXLA 1LR7A 1DS2I 2BUSA 5EX3A 1TBOA 1OVOA 2ENZA 3VDUA 2B0UC 1HPTA 1BUSA 1CT4I 3D00A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1TUR A;  2SGF I;  2F3C I;  1CGJ I;  2QQD A;  2KCX A;  2LEO A;  2QQC A;  1PCE A;  1HJA I;  1AN1 I;  1HDL A;  2WCY A;  5DAE A;  1M8C A;  2N71 A;  1M8B A;  4GI3 C;  1OMT A;  1UVG A;  2M5X A;  1CHO I;  1SGY I;  1TIH A;  1IY6 A;  2OVO A;  3SGB I;  4OVO A;  1IW4 A;  1Y1B A;  1SGE I;  2KMQ A;  2GKR I;  1BMO A;  2NU3 I;  2NU0 I;  1CT0 I;  2NU4 I;  2KMR A;  1H0Z A;  1KMA A;  1MT1 A;  2SGD I;  1TGS I;  1UVF A;  1SGP I;  1CGI I;  1CT2 I;  1LR8 A;  2NU1 I;  1Y1C A;  3HH2 C;  2SGQ I;  3SGQ I;  2N17 A;  1TUS A;  2GKT I;  3SEK C;  2SGE I;  1N13 A;  1PJU A;  2JZM A;  1SGN I;  5JHW C;  1NUB A;  1YTP A;  2P6A C;  2JYY A;  1R0R I;  1SGQ I;  2ERW A;  1TBQ R;  1CSO I;  1SGD I;  2GKV A;  1TBR R;  1Z7K B;  3TJQ A;  1DS3 I;  1UUC A;  3B4V C;  4HGU A;  1CE3 A;  1SGR I;  2KMP A;  2ARP F;  2KMO A;  2XRC A;  1YU6 C;  2JXD A;  1PPF I;  2V53 A;  1LR9 A;  1OMU A;  2NU2 I;  2N52 A;  2SGP I;  3OVO A;  3QTL D;  4SGB I;  1IY5 A;  1FYB A;  1OYV I;  1LR7 A;  1DS2 I;  2BUS A;  1OVO A;  2B0U C;  1HPT A;  1BUS A;  1CT4 I; 
#chains in the Genus database with same CATH topology
 1TUR A;  2SGF I;  5HI7 A;  2F3C I;  1X74 A;  2L8E A;  1CGJ I;  3TOB A;  2QQD A;  1CT4 I;  1KBF A;  1TBN A;  2ORV A;  3TO7 A;  3UGD A;  1ULN A;  1XA6 A;  4MPI A;  2PQ8 A;  3VDU A;  1FAR A;  2UVO A;  1V1H A;  2OU2 A;  3UFF A;  2KCX A;  2GVI A;  2J87 A;  2LEO A;  1PCE A;  2QQC A;  5FUV A;  2GIV A;  1HJA I;  1AN1 I;  1HDL A;  2WCY A;  5DAE A;  3VDP A;  2W0T A;  2N71 A;  1M8B A;  2JW6 A;  3CXL A;  1V1I A;  4GI3 C;  1MJA A;  3OL0 A;  2N1A B;  2RC4 A;  3TO9 A;  3R5D A;  1OMT A;  3UGI A;  5HQ8 A;  1UVG A;  3R5C A;  2E73 A;  1BUS A;  2M5X A;  1CHO I;  5E3R A;  2ELI A;  1K7U A;  1SGY I;  2OZU A;  2CWH A;  5EX0 A;  4E1P A;  1TIH A;  2WVJ A;  1IY6 A;  2OVO A;  4AML A;  1Q9B A;  4UXH A;  4UXI A;  3SGB I;  4OVO A;  3TO6 A;  3FSY A;  1NXU A;  4B6D A;  1Y1B A;  2JA1 A;  5CCL A;  1IW4 A;  1KBE A;  1Y8F A;  2E5R A;  2ORW A;  2WGC A;  1SGE I;  2J9R A;  2KMQ A;  1MJB A;  2GKR I;  1BMO A;  2NU3 I;  2NU0 I;  2ODD A;  2QQE A;  1PTQ A;  2OD1 A;  1CT0 I;  2NU4 I;  2V1C A;  3E2I A;  1WKX A;  2YUU A;  2KMR A;  1H0Z A;  1KMA A;  2A20 A;  1UHA A;  2QPO A;  2Y0M A;  1MT1 A;  2QQ0 A;  4UXJ A;  1R79 A;  2X3T A;  2SGD I;  1TGS I;  3MEK A;  5FUW A;  1S20 A;  1UVF A;  3E59 A;  1P9G A;  1CGI I;  1SGP I;  5FUY A;  2ROW A;  1XBT A;  1W3S A;  1CT2 I;  5FUX A;  5CCM A;  1P9Z A;  4FKD A;  1LR8 A;  3UEY A;  2NU1 I;  1X4S A;  4L9M A;  4DNC A;  3UGL A;  1WGT A;  1Y1C A;  3HH2 C;  3QWP A;  1ULK A;  2UZ3 A;  2SGQ I;  3R5B A;  3SGQ I;  3UEJ A;  3OXF A;  5J8C A;  3UOE A;  2N17 A;  1TUS A;  1PTR A;  2B8T A;  2GKT I;  3SEK C;  2SGE I;  1N13 A;  3TOA A;  5E3Q A;  1PJU A;  2JZM A;  3VE5 A;  3PDN A;  3R5A A;  1SGN I;  2DIP A;  5JHW C;  2CWF A;  2CWG A;  3OXG A;  1NUB A;  1YTP A;  2K9H A;  2LUY A;  2P6A C;  2CJS C;  1U5K A;  2JYY A;  2L7X A;  3FC3 A;  1R0R I;  1SGQ I;  2ERW A;  4JCV E;  3QAH A;  1K7V A;  2VRW B;  1TBQ R;  3KY9 A;  4E1R A;  1TOT A;  1CSO I;  1SGD I;  2ENN A;  2FNF X;  1FY7 A;  1K7T A;  3RU0 A;  1XX6 A;  7WGA A;  1FAQ A;  1ULM A;  2GKV A;  2YQP A;  3BJI A;  1TBR R;  1Z7K B;  3TJQ A;  1DS3 I;  2V1C C;  1RFH A;  3GOX A;  4A24 A;  1UUC A;  5J8F A;  1WTJ A;  3B4V C;  5E3P A;  4HGU A;  3FSX A;  1SGR I;  2KMP A;  1CE3 A;  1HEV A;  1MJ9 A;  2RIJ A;  2ARP F;  2KMO A;  2X52 A;  2XRC A;  1YU6 C;  2JXD A;  2DKV A;  1PPF I;  1W4R A;  1LR9 A;  1OMU A;  2NU2 I;  2N52 A;  2SGP I;  2V53 A;  3OVO A;  3QTL D;  1IY5 A;  4SGB I;  1FYB A;  1OYV I;  1Z2I A;  1VDD A;  2DB6 A;  3OXL A;  1LR7 A;  1DS2 I;  1WGC A;  2BUS A;  5EX3 A;  1TBO A;  1OVO A;  2ENZ A;  4WP4 A;  2LB7 A;  2B0U C;  1HPT A;  9WGA A;  1M8C A;  3D00 A; 
#chains in the Genus database with same CATH homology
 1TUR A;  2SGF I;  5HI7 A;  2F3C I;  1X74 A;  2L8E A;  1CGJ I;  2QQD A;  1KBF A;  1TBN A;  2ORV A;  3UGD A;  1XA6 A;  1FAR A;  1V1H A;  3UFF A;  2KCX A;  2GVI A;  2J87 A;  2LEO A;  1PCE A;  2QQC A;  5FUV A;  1HJA I;  1AN1 I;  1HDL A;  2WCY A;  5DAE A;  1M8C A;  3VDP A;  2W0T A;  2N71 A;  1M8B A;  2JW6 A;  3CXL A;  1V1I A;  4GI3 C;  3OL0 A;  2N1A B;  3UGI A;  1OMT A;  5HQ8 A;  1UVG A;  2E73 A;  2M5X A;  1CHO I;  2ELI A;  1SGY I;  5EX0 A;  4E1P A;  1TIH A;  2WVJ A;  1IY6 A;  2OVO A;  4UXH A;  4UXI A;  3SGB I;  4OVO A;  4B6D A;  5CCL A;  1IW4 A;  1Y1B A;  2JA1 A;  1KBE A;  1Y8F A;  2E5R A;  2ORW A;  1SGE I;  2J9R A;  2KMQ A;  2GKR I;  1BMO A;  2NU3 I;  2NU0 I;  2ODD A;  2QQE A;  1PTQ A;  2OD1 A;  1CT0 I;  2NU4 I;  2V1C A;  3E2I A;  2YUU A;  2KMR A;  1H0Z A;  1KMA A;  2A20 A;  4UXJ A;  2QPO A;  1MT1 A;  2QQ0 A;  1R79 A;  2SGD I;  1TGS I;  3MEK A;  5FUW A;  1UVF A;  3E59 A;  1SGP I;  1CGI I;  5FUY A;  2ROW A;  1XBT A;  1W3S A;  1CT2 I;  5FUX A;  5CCM A;  4FKD A;  1LR8 A;  3UEY A;  2NU1 I;  1X4S A;  4L9M A;  3UGL A;  1Y1C A;  3HH2 C;  3QWP A;  2UZ3 A;  2SGQ I;  3SGQ I;  3UEJ A;  3OXF A;  2N17 A;  1TUS A;  1PTR A;  2B8T A;  2GKT I;  3SEK C;  2SGE I;  1N13 A;  1PJU A;  2JZM A;  3VE5 A;  3PDN A;  1SGN I;  2DIP A;  5JHW C;  3OXG A;  1NUB A;  1YTP A;  2K9H A;  2LUY A;  2P6A C;  2CJS C;  1U5K A;  2JYY A;  2L7X A;  3FC3 A;  1R0R I;  1SGQ I;  2ERW A;  4JCV E;  2VRW B;  3KY9 A;  1TBQ R;  4E1R A;  1TOT A;  1CSO I;  1SGD I;  2ENN A;  2FNF X;  3RU0 A;  1XX6 A;  1FAQ A;  2GKV A;  2YQP A;  3BJI A;  1TBR R;  1Z7K B;  3TJQ A;  1DS3 I;  2V1C C;  1RFH A;  3GOX A;  4A24 A;  1UUC A;  3B4V C;  4HGU A;  1CE3 A;  1SGR I;  2KMP A;  2ARP F;  2KMO A;  2XRC A;  1YU6 C;  2JXD A;  1PPF I;  1W4R A;  1LR9 A;  1OMU A;  2NU2 I;  2N52 A;  2SGP I;  2V53 A;  3OVO A;  3QTL D;  1IY5 A;  4SGB I;  1FYB A;  1OYV I;  1VDD A;  2DB6 A;  3OXL A;  1LR7 A;  1DS2 I;  2BUS A;  5EX3 A;  1TBO A;  1OVO A;  2ENZ A;  3VDU A;  2B0U C;  1HPT A;  1BUS A;  1CT4 I;  3D00 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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