1TUSA

Solution structure of reactive-site hydrolyzed turkey ovomucoid third domain by nuclear magnetic resonance and distance geometry methods
Total Genus 8
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
8
sequence length
56
structure length
56
Chain Sequence
LAAVSVDCSEYPKPACTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords OVOMUCOID
publication title Solution structure of reactive-site hydrolyzed turkey ovomucoid third domain by nuclear magnetic resonance and distance geometry methods.
pubmed doi rcsb
source organism Meleagris gallopavo
molecule tags Serine proteinase inhibitor
total genus 8
structure length 56
sequence length 56
ec nomenclature
pdb deposition date 1994-07-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1tusA00
2SGEI 1IW4A 2P6AC 2N52A 2NU0I 1UUCA 1PJUA 5JHWC 2SGPI 1TIHA 1OMTA 2XRCA 2JXDA 2SGFI 3B4VC 3HH2C 2N17A 1N13A 1SGRI 2KMQA 2V53A 1CT0I 2LEOA 1OVOA 1LR8A 1DS2I 2M5XA 1SGYI 1HJAI 2B0UC 1NUBA 1YTPA 1Z7KB 1LR7A 2QQDA 1UVFA 1BMOA 4SGBI 1FYBA 1TURA 3QTLD 1HPTA 1DS3I 2N71A 1SGNI 2BUSA 1LR9A 2JZMA 1M8BA 1Y1CA 4GI3C 1IY5A 2SGQI 4HGUA 1AN1I 1PPFI 1CHOI 1CT2I 1H0ZA 2GKVA 1M8CA 1SGEI 1CSOI 1CT4I 2ERWA 1Y1BA 1TBRR 1SGQI 2F3CI 1CE3A 1PCEA 2WCYA 2NU2I 2SGDI 3TJQA 2GKTI 1OMUA 2QQCA 2KMPA 1HDLA 2NU1I 3SEKC 1BUSA 2KMRA 2OVOA 1CGJI 2JYYA 1SGDI 1IY6A 1MT1A 2ARPF 1TUSA 1TBQR 2GKRI 1KMAA 2KMOA 1TGSI 1R0RI 2NU4I 2NU3I 2KCXA 5DAEA 1YU6C 3SGQI 1UVGA 1CGII 1OYVI 3SGBI 4OVOA 3OVOA 1SGPI
chains in the Genus database with same CATH superfamily
2ODDA 2CWHA 3UGIA 2SGEI 1Q9BA 2P6AC 1IW4A 2N52A 2NU0I 1FY7A 3E2IA 4E1RA 5HQ8A 2B8TA 1TOTA 1UUCA 4DNCA 2X3TA 3FSXA 5CCMA 1WKXA 3GOXA 1PJUA 4JCVE 3TOAA 5JHWC 1V1HA 2SGPI 1TIHA 4L9MA 1OMTA 2ORWA 2ROWA 2XRCA 2JXDA 3D00A 3TO9A 2GIVA 9WGAA 1WTJA 4UXIA 1PTQA 2SGFI 3B4VC 2YQPA 2N17A 3HH2C 3R5CA 4UXJA 5FUYA 1N13A 2X52A 1SGRI 2KMQA 2V53A 1CT0I 2ELIA 2JW6A 1FAQA 2RC4A 1SGPI 2LEOA 4A24A 5CCLA 1OVOA 1LR8A 1DS2I 2J9RA 3TO7A 2M5XA 1SGYI 1HJAI 2B0UC 2OU2A 1NUBA 1YTPA 1Z7KB 1LR7A 2QQDA 1UVFA 3FSYA 3OXGA 1PTRA 1BMOA 1XA6A 2QQEA 4SGBI 3UEJA 3KY9A 1KBEA 3VE5A 2CWGA 2Y0MA 1FYBA 1TURA 5J8FA 1KMAA 3QTLD 2ENZA 1HPTA 1DS3I 1W4RA 2DB6A 1R79A 2N71A 2UZ3A 3CXLA 1SGNI 1K7VA 2BUSA 1LR9A 2DIPA 2JZMA 3UFFA 1M8BA 1Y1CA 1Y8FA 2J87A 2JA1A 4GI3C 4UXHA 1IY5A 2SGQI 4HGUA 3OXLA 4B6DA 2ENNA 5E3QA 1X74A 2L8EA 1RFHA 3E59A 1AN1I 1PPFI 1CHOI 1P9ZA 2OZUA 3R5DA 7WGAA 1CT2I 1H0ZA 2W0TA 3OVOA 3PDNA 3R5BA 3VDPA 1KBFA 2GKVA 1M8CA 1MJ9A 1SGEI 1TBOA 1CSOI 2V1CC 1ULMA 1S20A 3RU0A 2WVJA 5E3PA 3QWPA 1CT4I 2ERWA 1W3SA 1Y1BA 1TBRR 1SGQI 2F3CI 1VDDA 4WP4A 1PCEA 2A20A 2WCYA 3UGDA 1MJBA 1TBNA 2NU2I 2SGDI 5FUWA 5HI7A 3TJQA 1WGTA 2GKTI 4E1PA 1HEVA 4AMLA 1OMUA 2QQCA 2KMPA 3VDUA 2V1CA 2OD1A 1HDLA 5FUVA 2UVOA 1XX6A 1WGCA 3MEKA 2CJSC 2NU1I 3FC3A 1MJAA 3SEKC 1BUSA 4MPIA 2KMRA 1X4SA 1U5KA 2CWFA 3UGLA 5E3RA 2OVOA 1CGJI 2DKVA 3TOBA 2JYYA 2YUUA 1SGDI 1V1IA 1P9GA 3UEYA 1XBTA 1IY6A 2LB7A 1CE3A 1NXUA 1MT1A 2ARPF 5EX0A 1Z2IA 5EX3A 2PQ8A 2ORVA 1FARA 1TBQR 1TUSA 2GKRI 2KMOA 1ULNA 1K7UA 2QQ0A 1TGSI 3BJIA 1R0RI 3QAHA 2NU4I 2NU3I 3OL0A 2KCXA 3R5AA 2WGCA 2LUYA 2VRWB 1YU6C 2K9HA 5DAEA 2RIJA 2GVIA 2N1AB 3SGQI 1UVGA 1CGII 1K7TA 2E73A 3OXFA 3TO6A 5FUXA 1OYVI 2QPOA 3SGBI 3UOEA 2FNFX 1ULKA 4OVOA 5J8CA 2L7XA 4FKDA 2E5RA 1UHAA
chains in the Genus database with same CATH topology
2ODDA 3UGIA 2SGEI 1IW4A 2P6AC 2N52A 2NU0I 3E2IA 4E1RA 2B8TA 1TOTA 1UUCA 5CCMA 3GOXA 1PJUA 4JCVE 5JHWC 1V1HA 2SGPI 1TIHA 4L9MA 1OMTA 2ORWA 2ROWA 2XRCA 2JXDA 3D00A 4UXIA 1PTQA 2SGFI 3B4VC 2YQPA 2N17A 3HH2C 4UXJA 5FUYA 1N13A 1SGRI 2KMQA 2V53A 1CT0I 2ELIA 2JW6A 1FAQA 2LEOA 4A24A 5CCLA 1OVOA 1LR8A 1DS2I 2J9RA 2M5XA 1SGYI 1HJAI 2B0UC 1NUBA 1YTPA 1Z7KB 1LR7A 2QQDA 1UVFA 3OXGA 1PTRA 1BMOA 1XA6A 2QQEA 4SGBI 3UEJA 3KY9A 1KBEA 3VE5A 1FYBA 1TURA 3QTLD 2ENZA 1HPTA 1DS3I 1W4RA 2DB6A 1R79A 2N71A 2UZ3A 3CXLA 1SGNI 2BUSA 1LR9A 2DIPA 2JZMA 3UFFA 1M8BA 1Y1CA 1Y8FA 2J87A 2JA1A 4GI3C 4UXHA 1IY5A 2SGQI 4HGUA 3OXLA 4B6DA 2ENNA 1X74A 2L8EA 1RFHA 3E59A 1AN1I 1PPFI 1CHOI 1CT2I 1H0ZA 2W0TA 3OVOA 3PDNA 3VDPA 1KBFA 2GKVA 1M8CA 1SGEI 1TBOA 1CSOI 2V1CC 3RU0A 2WVJA 3QWPA 1CT4I 2ERWA 1W3SA 1Y1BA 1TBRR 1SGQI 2F3CI 1VDDA 3UGDA 1PCEA 2A20A 2WCYA 5HQ8A 2NU2I 1TBNA 2SGDI 5HI7A 5FUWA 3TJQA 2GKTI 4E1PA 1OMUA 2QQCA 2KMPA 3VDUA 2V1CA 2OD1A 1HDLA 5FUVA 1XX6A 3MEKA 2CJSC 2NU1I 3FC3A 3SEKC 1BUSA 2KMRA 1X4SA 1U5KA 3UGLA 2OVOA 1CGJI 2JYYA 2YUUA 1SGDI 1V1IA 3UEYA 1XBTA 1IY6A 1CE3A 1MT1A 2ARPF 5EX0A 5EX3A 2ORVA 1FARA 1TBQR 1TUSA 2GKRI 2KMOA 2QQ0A 3BJIA 1KMAA 1TGSI 1R0RI 2NU4I 2NU3I 3OL0A 2KCXA 2LUYA 2VRWB 1YU6C 2K9HA 5DAEA 2GVIA 2N1AB 3SGQI 1UVGA 1CGII 2E73A 3OXFA 5FUXA 1OYVI 2QPOA 3SGBI 2FNFX 4OVOA 2L7XA 4FKDA 2E5RA 1SGPI
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2SGE I;  1IW4 A;  2P6A C;  2N52 A;  2NU0 I;  1UUC A;  1PJU A;  5JHW C;  2SGP I;  1TIH A;  1OMT A;  2XRC A;  2JXD A;  2SGF I;  3B4V C;  3HH2 C;  2N17 A;  1N13 A;  1SGR I;  2KMQ A;  2V53 A;  1CT0 I;  2LEO A;  1OVO A;  1LR8 A;  1DS2 I;  2M5X A;  1SGY I;  1HJA I;  2B0U C;  1NUB A;  1YTP A;  1Z7K B;  1LR7 A;  2QQD A;  1UVF A;  1BMO A;  4SGB I;  1FYB A;  1TUR A;  3QTL D;  1HPT A;  1DS3 I;  2N71 A;  1SGN I;  2BUS A;  1LR9 A;  2JZM A;  1M8B A;  1Y1C A;  4GI3 C;  1IY5 A;  2SGQ I;  4HGU A;  1AN1 I;  1PPF I;  1CHO I;  1CT2 I;  1H0Z A;  2GKV A;  1M8C A;  1SGE I;  1CSO I;  1CT4 I;  2ERW A;  1Y1B A;  1TBR R;  1SGQ I;  2F3C I;  1CE3 A;  1PCE A;  2WCY A;  2NU2 I;  2SGD I;  3TJQ A;  2GKT I;  1OMU A;  2QQC A;  2KMP A;  1HDL A;  2NU1 I;  3SEK C;  1BUS A;  2KMR A;  2OVO A;  1CGJ I;  2JYY A;  1SGD I;  1IY6 A;  1MT1 A;  2ARP F;  1TUS A;  1TBQ R;  2GKR I;  1KMA A;  2KMO A;  1TGS I;  1R0R I;  2NU4 I;  2NU3 I;  2KCX A;  5DAE A;  1YU6 C;  3SGQ I;  1UVG A;  1CGI I;  1OYV I;  3SGB I;  4OVO A;  3OVO A;  1SGP I; 
#chains in the Genus database with same CATH topology
 2ODD A;  2CWH A;  3UGI A;  2SGE I;  1Q9B A;  2P6A C;  1IW4 A;  2N52 A;  2NU0 I;  1FY7 A;  3E2I A;  4E1R A;  5HQ8 A;  2B8T A;  1TOT A;  1UUC A;  4DNC A;  2X3T A;  3FSX A;  5CCM A;  1WKX A;  3GOX A;  1PJU A;  4JCV E;  3TOA A;  5JHW C;  1V1H A;  2SGP I;  1TIH A;  4L9M A;  1OMT A;  2ORW A;  2ROW A;  2XRC A;  2JXD A;  3D00 A;  3TO9 A;  2GIV A;  9WGA A;  1WTJ A;  4UXI A;  1PTQ A;  2SGF I;  3B4V C;  2YQP A;  2N17 A;  3HH2 C;  3R5C A;  4UXJ A;  5FUY A;  1N13 A;  2X52 A;  1SGR I;  2KMQ A;  2V53 A;  1CT0 I;  2ELI A;  2JW6 A;  1FAQ A;  2RC4 A;  1SGP I;  2LEO A;  4A24 A;  5CCL A;  1OVO A;  1LR8 A;  1DS2 I;  2J9R A;  3TO7 A;  2M5X A;  1SGY I;  1HJA I;  2B0U C;  2OU2 A;  1NUB A;  1YTP A;  1Z7K B;  1LR7 A;  2QQD A;  1UVF A;  3FSY A;  3OXG A;  1PTR A;  1BMO A;  1XA6 A;  2QQE A;  4SGB I;  3UEJ A;  3KY9 A;  1KBE A;  3VE5 A;  2CWG A;  2Y0M A;  1FYB A;  1TUR A;  5J8F A;  1KMA A;  3QTL D;  2ENZ A;  1HPT A;  1DS3 I;  1W4R A;  2DB6 A;  1R79 A;  2N71 A;  2UZ3 A;  3CXL A;  1SGN I;  1K7V A;  2BUS A;  1LR9 A;  2DIP A;  2JZM A;  3UFF A;  1M8B A;  1Y1C A;  1Y8F A;  2J87 A;  2JA1 A;  4GI3 C;  4UXH A;  1IY5 A;  2SGQ I;  4HGU A;  3OXL A;  4B6D A;  2ENN A;  5E3Q A;  1X74 A;  2L8E A;  1RFH A;  3E59 A;  1AN1 I;  1PPF I;  1CHO I;  1P9Z A;  2OZU A;  3R5D A;  7WGA A;  1CT2 I;  1H0Z A;  2W0T A;  3OVO A;  3PDN A;  3R5B A;  3VDP A;  1KBF A;  2GKV A;  1M8C A;  1MJ9 A;  1SGE I;  1TBO A;  1CSO I;  2V1C C;  1ULM A;  1S20 A;  3RU0 A;  2WVJ A;  5E3P A;  3QWP A;  1CT4 I;  2ERW A;  1W3S A;  1Y1B A;  1TBR R;  1SGQ I;  2F3C I;  1VDD A;  4WP4 A;  1PCE A;  2A20 A;  2WCY A;  3UGD A;  1MJB A;  1TBN A;  2NU2 I;  2SGD I;  5FUW A;  5HI7 A;  3TJQ A;  1WGT A;  2GKT I;  4E1P A;  1HEV A;  4AML A;  1OMU A;  2QQC A;  2KMP A;  3VDU A;  2V1C A;  2OD1 A;  1HDL A;  5FUV A;  2UVO A;  1XX6 A;  1WGC A;  3MEK A;  2CJS C;  2NU1 I;  3FC3 A;  1MJA A;  3SEK C;  1BUS A;  4MPI A;  2KMR A;  1X4S A;  1U5K A;  2CWF A;  3UGL A;  5E3R A;  2OVO A;  1CGJ I;  2DKV A;  3TOB A;  2JYY A;  2YUU A;  1SGD I;  1V1I A;  1P9G A;  3UEY A;  1XBT A;  1IY6 A;  2LB7 A;  1CE3 A;  1NXU A;  1MT1 A;  2ARP F;  5EX0 A;  1Z2I A;  5EX3 A;  2PQ8 A;  2ORV A;  1FAR A;  1TBQ R;  1TUS A;  2GKR I;  2KMO A;  1ULN A;  1K7U A;  2QQ0 A;  1TGS I;  3BJI A;  1R0R I;  3QAH A;  2NU4 I;  2NU3 I;  3OL0 A;  2KCX A;  3R5A A;  2WGC A;  2LUY A;  2VRW B;  1YU6 C;  2K9H A;  5DAE A;  2RIJ A;  2GVI A;  2N1A B;  3SGQ I;  1UVG A;  1CGI I;  1K7T A;  2E73 A;  3OXF A;  3TO6 A;  5FUX A;  1OYV I;  2QPO A;  3SGB I;  3UOE A;  2FNF X;  1ULK A;  4OVO A;  5J8C A;  2L7X A;  4FKD A;  2E5R A;  1UHA A; 
#chains in the Genus database with same CATH homology
 2ODD A;  3UGI A;  2SGE I;  1IW4 A;  2P6A C;  2N52 A;  2NU0 I;  3E2I A;  4E1R A;  2B8T A;  1TOT A;  1UUC A;  5CCM A;  3GOX A;  1PJU A;  4JCV E;  5JHW C;  1V1H A;  2SGP I;  1TIH A;  4L9M A;  1OMT A;  2ORW A;  2ROW A;  2XRC A;  2JXD A;  3D00 A;  4UXI A;  1PTQ A;  2SGF I;  3B4V C;  2YQP A;  2N17 A;  3HH2 C;  4UXJ A;  5FUY A;  1N13 A;  1SGR I;  2KMQ A;  2V53 A;  1CT0 I;  2ELI A;  2JW6 A;  1FAQ A;  2LEO A;  4A24 A;  5CCL A;  1OVO A;  1LR8 A;  1DS2 I;  2J9R A;  2M5X A;  1SGY I;  1HJA I;  2B0U C;  1NUB A;  1YTP A;  1Z7K B;  1LR7 A;  2QQD A;  1UVF A;  3OXG A;  1PTR A;  1BMO A;  1XA6 A;  2QQE A;  4SGB I;  3UEJ A;  3KY9 A;  1KBE A;  3VE5 A;  1FYB A;  1TUR A;  3QTL D;  2ENZ A;  1HPT A;  1DS3 I;  1W4R A;  2DB6 A;  1R79 A;  2N71 A;  2UZ3 A;  3CXL A;  1SGN I;  2BUS A;  1LR9 A;  2DIP A;  2JZM A;  3UFF A;  1M8B A;  1Y1C A;  1Y8F A;  2J87 A;  2JA1 A;  4GI3 C;  4UXH A;  1IY5 A;  2SGQ I;  4HGU A;  3OXL A;  4B6D A;  2ENN A;  1X74 A;  2L8E A;  1RFH A;  3E59 A;  1AN1 I;  1PPF I;  1CHO I;  1CT2 I;  1H0Z A;  2W0T A;  3OVO A;  3PDN A;  3VDP A;  1KBF A;  2GKV A;  1M8C A;  1SGE I;  1TBO A;  1CSO I;  2V1C C;  3RU0 A;  2WVJ A;  3QWP A;  1CT4 I;  2ERW A;  1W3S A;  1Y1B A;  1TBR R;  1SGQ I;  2F3C I;  1VDD A;  3UGD A;  1PCE A;  2A20 A;  2WCY A;  5HQ8 A;  2NU2 I;  1TBN A;  2SGD I;  5HI7 A;  5FUW A;  3TJQ A;  2GKT I;  4E1P A;  1OMU A;  2QQC A;  2KMP A;  3VDU A;  2V1C A;  2OD1 A;  1HDL A;  5FUV A;  1XX6 A;  3MEK A;  2CJS C;  2NU1 I;  3FC3 A;  3SEK C;  1BUS A;  2KMR A;  1X4S A;  1U5K A;  3UGL A;  2OVO A;  1CGJ I;  2JYY A;  2YUU A;  1SGD I;  1V1I A;  3UEY A;  1XBT A;  1IY6 A;  1CE3 A;  1MT1 A;  2ARP F;  5EX0 A;  5EX3 A;  2ORV A;  1FAR A;  1TBQ R;  1TUS A;  2GKR I;  2KMO A;  2QQ0 A;  3BJI A;  1KMA A;  1TGS I;  1R0R I;  2NU4 I;  2NU3 I;  3OL0 A;  2KCX A;  2LUY A;  2VRW B;  1YU6 C;  2K9H A;  5DAE A;  2GVI A;  2N1A B;  3SGQ I;  1UVG A;  1CGI I;  2E73 A;  3OXF A;  5FUX A;  1OYV I;  2QPO A;  3SGB I;  2FNF X;  4OVO A;  2L7X A;  4FKD A;  2E5R A;  1SGP I; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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