1IY5A

Solution structure of wild type omsvp3
Total Genus 7
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
7
sequence length
54
structure length
54
Chain Sequence
AVSVDCSEYPKPACTMEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Inhibitory Specificity Change of Ovomucoid Third Domain of the Silver Pheasant upon Introduction of an Engineered Cys14-Cys39 Bond
pubmed doi rcsb
molecule tags Hydrolase
source organism Lophura nycthemera
molecule keywords OMSVP3
total genus 7
structure length 54
sequence length 54
ec nomenclature
pdb deposition date 2002-07-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1iy5A00
1CGJI 1Y1BA 1IY5A 3HH2C 1YTPA 1CHOI 2NU4I 2KMPA 4SGBI 1CT4I 1SGEI 5JHWC 2NU0I 2NU3I 1TURA 2N71A 1TBQR 2KMOA 2JZMA 1OMUA 1PPFI 1PCEA 2KMQA 2V53A 2GKVA 2P6AC 1Y1CA 1H0ZA 1HJAI 1YU6C 1SGQI 1TIHA 1CT2I 1UVGA 2N52A 1BUSA 1IY6A 2M5XA 1N13A 1SGRI 1SGNI 2QQCA 3SEKC 2JXDA 4HGUA 2LEOA 1NUBA 1SGYI 1DS2I 1TUSA 1HPTA 3B4VC 1PJUA 2SGQI 1SGPI 1SGDI 2BUSA 2QQDA 1HDLA 2KMRA 3QTLD 2ARPF 1OVOA 2F3CI 2NU2I 1DS3I 3OVOA 1CT0I 1UVFA 1BMOA 1Z7KB 1M8BA 1CE3A 3SGQI 2KCXA 1OYVI 2SGFI 1CGII 4GI3C 2B0UC 2GKRI 2SGPI 1IW4A 1LR9A 1OMTA 5DAEA 1LR7A 1R0RI 2WCYA 1LR8A 4OVOA 2OVOA 1MT1A 2JYYA 2NU1I 1TGSI 2SGEI 1AN1I 1FYBA 1KMAA 1CSOI 1M8CA 3SGBI 1TBRR 2N17A 2ERWA 2XRCA 2SGDI 1UUCA 2GKTI 3TJQA
chains in the Genus database with same CATH superfamily
1CGJI 1XBTA 5FUXA 3UEYA 1Y1BA 2UZ3A 1IY5A 3HH2C 1YTPA 1CHOI 2NU4I 2KMPA 3VE5A 4SGBI 1Y8FA 3CXLA 1CT4I 1FAQA 1SGEI 1ULNA 2OZUA 5JHWC 1VDDA 2NU0I 5EX3A 3E59A 3OXGA 3UFFA 2A20A 2NU3I 1TURA 2N71A 1XA6A 5HI7A 1TBQR 1TBOA 1UHAA 2KMOA 2JZMA 1OMUA 2V1CC 1PPFI 2GIVA 2WVJA 3BJIA 3UGDA 1P9GA 3QWPA 2OU2A 3MEKA 1PCEA 3R5BA 2KMQA 2ELIA 4UXJA 2V53A 2GKVA 1X4SA 1Y1CA 2P6AC 1H0ZA 1HJAI 1YU6C 1XX6A 2ORWA 1HEVA 1PTQA 2E73A 4FKDA 1SGQI 2RIJA 3FSXA 1TIHA 1RFHA 2RC4A 2W0TA 1CT2I 1UVGA 2N52A 2QQEA 1BUSA 2PQ8A 3FC3A 2M5XA 1IY6A 3UEJA 4AMLA 1N13A 1TOTA 3GOXA 1V1IA 1SGRI 1SGNI 5J8FA 2QQCA 2DKVA 1W4RA 2JXDA 3D00A 3SEKC 4HGUA 2LEOA 1PTRA 1NUBA 1SGYI 2LB7A 1NXUA 1DS2I 3KY9A 1TUSA 3OL0A 1HPTA 4MPIA 3B4VC 5E3RA 1ULKA 4E1PA 2QPOA 5EX0A 1PJUA 2SGQI 1SGPI 1SGDI 2BUSA 2Y0MA 2VRWB 4DNCA 3E2IA 3UOEA 3VDPA 1KBEA 2GVIA 4UXHA 2QQDA 3TOBA 1MJAA 1HDLA 2KMRA 1MJ9A 2JA1A 1X74A 3PDNA 1Z2IA 2ARPF 1OVOA 1ULMA 2F3CI 2NU2I 3QTLD 1KBFA 3TO9A 2DIPA 5FUYA 4A24A 1DS3I 3OVOA 1CT0I 1S20A 1UVFA 1BMOA 1Z7KB 2V1CA 5HQ8A 1M8BA 2J9RA 1CE3A 3FSYA 3OXLA 3TOAA 2L7XA 3SGQI 2L8EA 2KCXA 2FNFX 2OD1A 1OYVI 1TBNA 1MJBA 2SGFI 1Q9BA 9WGAA 1CGII 4GI3C 7WGAA 2B0UC 2GKRI 5FUWA 1WKXA 2X3TA 2SGPI 1IW4A 1LR9A 1OMTA 1V1HA 5DAEA 3UGLA 3R5DA 2WGCA 2N1AB 1LR7A 2DB6A 1U5KA 1R0RI 2WCYA 2E5RA 3OXFA 1LR8A 4OVOA 2CJSC 1WGTA 2QQ0A 2ENZA 2OVOA 4B6DA 5J8CA 1MT1A 5FUVA 1FARA 3TO7A 2JYYA 2CWFA 2NU1I 1WTJA 1TGSI 2ODDA 2CWHA 3QAHA 3R5AA 2SGEI 5E3QA 1AN1I 1FYBA 1KMAA 1CSOI 1M8CA 2J87A 2CWGA 2X52A 2JW6A 3SGBI 4WP4A 3UGIA 4JCVE 2B8TA 1W3SA 2ROWA 2UVOA 5E3PA 2YQPA 4UXIA 1FY7A 3RU0A 2LUYA 2ORVA 1TBRR 2N17A 2ERWA 4E1RA 4L9MA 2ENNA 1P9ZA 3VDUA 2XRCA 3R5CA 1WGCA 2SGDI 2K9HA 2YUUA 1K7UA 1K7TA 1UUCA 1R79A 5CCLA 2GKTI 3TO6A 3TJQA 5CCMA 1K7VA
chains in the Genus database with same CATH topology
1CGJI 1XBTA 5FUXA 3UEYA 1Y1BA 2UZ3A 1IY5A 3HH2C 1YTPA 1CHOI 2NU4I 2KMPA 3VE5A 4SGBI 1Y8FA 3CXLA 1CT4I 1FAQA 1SGEI 5JHWC 1VDDA 2NU0I 5EX3A 3E59A 3OXGA 3UFFA 2A20A 2NU3I 1TURA 2N71A 1XA6A 5HI7A 1TBQR 1TBOA 2KMOA 2JZMA 1OMUA 2V1CC 1PPFI 2WVJA 3BJIA 3UGDA 3QWPA 3MEKA 1PCEA 2KMQA 2ELIA 4UXJA 2V53A 2GKVA 1X4SA 1Y1CA 2P6AC 1H0ZA 1HJAI 1YU6C 1XX6A 2ORWA 1PTQA 2E73A 4FKDA 1SGQI 1TIHA 1RFHA 2W0TA 1CT2I 1UVGA 2N52A 2QQEA 1BUSA 3FC3A 2M5XA 1IY6A 3UEJA 1N13A 1TOTA 3GOXA 1V1IA 1SGRI 1SGNI 2QQCA 1W4RA 2JXDA 3D00A 3SEKC 4HGUA 2LEOA 1PTRA 1NUBA 1SGYI 3KY9A 1DS2I 3OL0A 1TUSA 1HPTA 3B4VC 4E1PA 2QPOA 5EX0A 1PJUA 2SGQI 1SGPI 1SGDI 2BUSA 2VRWB 3E2IA 3VDPA 1KBEA 2GVIA 4UXHA 2QQDA 1HDLA 2KMRA 2JA1A 1X74A 3PDNA 3QTLD 2ARPF 1OVOA 2F3CI 2NU2I 3UGIA 1KBFA 2DIPA 5FUYA 4A24A 1DS3I 3OVOA 1CT0I 1UVFA 1BMOA 1Z7KB 2V1CA 5HQ8A 1M8BA 2J9RA 1CE3A 3OXLA 2L7XA 3SGQI 2L8EA 2KCXA 2FNFX 2OD1A 1OYVI 1TBNA 2SGFI 1CGII 4GI3C 2B0UC 2GKRI 5FUWA 2SGPI 1IW4A 1LR9A 1OMTA 1V1HA 5DAEA 3UGLA 2N1AB 1LR7A 2DB6A 1U5KA 1R0RI 2WCYA 2E5RA 3OXFA 1LR8A 4OVOA 2CJSC 2QQ0A 2ENZA 2OVOA 4B6DA 1MT1A 5FUVA 1FARA 2JYYA 2NU1I 1TGSI 2ODDA 2SGEI 1AN1I 1FYBA 1KMAA 1CSOI 1M8CA 2J87A 3SGBI 2JW6A 4JCVE 2B8TA 1W3SA 2ROWA 2YQPA 4UXIA 3RU0A 2LUYA 2ORVA 1TBRR 2N17A 2ERWA 4E1RA 4L9MA 2ENNA 3VDUA 2XRCA 2SGDI 2K9HA 2YUUA 1UUCA 1R79A 5CCLA 2GKTI 3TJQA 5CCMA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1CGJ I;  1Y1B A;  1IY5 A;  3HH2 C;  1YTP A;  1CHO I;  2NU4 I;  2KMP A;  4SGB I;  1CT4 I;  1SGE I;  5JHW C;  2NU0 I;  2NU3 I;  1TUR A;  2N71 A;  1TBQ R;  2KMO A;  2JZM A;  1OMU A;  1PPF I;  1PCE A;  2KMQ A;  2V53 A;  2GKV A;  2P6A C;  1Y1C A;  1H0Z A;  1HJA I;  1YU6 C;  1SGQ I;  1TIH A;  1CT2 I;  1UVG A;  2N52 A;  1BUS A;  1IY6 A;  2M5X A;  1N13 A;  1SGR I;  1SGN I;  2QQC A;  3SEK C;  2JXD A;  4HGU A;  2LEO A;  1NUB A;  1SGY I;  1DS2 I;  1TUS A;  1HPT A;  3B4V C;  1PJU A;  2SGQ I;  1SGP I;  1SGD I;  2BUS A;  2QQD A;  1HDL A;  2KMR A;  3QTL D;  2ARP F;  1OVO A;  2F3C I;  2NU2 I;  1DS3 I;  3OVO A;  1CT0 I;  1UVF A;  1BMO A;  1Z7K B;  1M8B A;  1CE3 A;  3SGQ I;  2KCX A;  1OYV I;  2SGF I;  1CGI I;  4GI3 C;  2B0U C;  2GKR I;  2SGP I;  1IW4 A;  1LR9 A;  1OMT A;  5DAE A;  1LR7 A;  1R0R I;  2WCY A;  1LR8 A;  4OVO A;  2OVO A;  1MT1 A;  2JYY A;  2NU1 I;  1TGS I;  2SGE I;  1AN1 I;  1FYB A;  1KMA A;  1CSO I;  1M8C A;  3SGB I;  1TBR R;  2N17 A;  2ERW A;  2XRC A;  2SGD I;  1UUC A;  2GKT I;  3TJQ A; 
#chains in the Genus database with same CATH topology
 1CGJ I;  1XBT A;  5FUX A;  3UEY A;  1Y1B A;  2UZ3 A;  1IY5 A;  3HH2 C;  1YTP A;  1CHO I;  2NU4 I;  2KMP A;  3VE5 A;  4SGB I;  1Y8F A;  3CXL A;  1CT4 I;  1FAQ A;  1SGE I;  1ULN A;  2OZU A;  5JHW C;  1VDD A;  2NU0 I;  5EX3 A;  3E59 A;  3OXG A;  3UFF A;  2A20 A;  2NU3 I;  1TUR A;  2N71 A;  1XA6 A;  5HI7 A;  1TBQ R;  1TBO A;  1UHA A;  2KMO A;  2JZM A;  1OMU A;  2V1C C;  1PPF I;  2GIV A;  2WVJ A;  3BJI A;  3UGD A;  1P9G A;  3QWP A;  2OU2 A;  3MEK A;  1PCE A;  3R5B A;  2KMQ A;  2ELI A;  4UXJ A;  2V53 A;  2GKV A;  1X4S A;  1Y1C A;  2P6A C;  1H0Z A;  1HJA I;  1YU6 C;  1XX6 A;  2ORW A;  1HEV A;  1PTQ A;  2E73 A;  4FKD A;  1SGQ I;  2RIJ A;  3FSX A;  1TIH A;  1RFH A;  2RC4 A;  2W0T A;  1CT2 I;  1UVG A;  2N52 A;  2QQE A;  1BUS A;  2PQ8 A;  3FC3 A;  2M5X A;  1IY6 A;  3UEJ A;  4AML A;  1N13 A;  1TOT A;  3GOX A;  1V1I A;  1SGR I;  1SGN I;  5J8F A;  2QQC A;  2DKV A;  1W4R A;  2JXD A;  3D00 A;  3SEK C;  4HGU A;  2LEO A;  1PTR A;  1NUB A;  1SGY I;  2LB7 A;  1NXU A;  1DS2 I;  3KY9 A;  1TUS A;  3OL0 A;  1HPT A;  4MPI A;  3B4V C;  5E3R A;  1ULK A;  4E1P A;  2QPO A;  5EX0 A;  1PJU A;  2SGQ I;  1SGP I;  1SGD I;  2BUS A;  2Y0M A;  2VRW B;  4DNC A;  3E2I A;  3UOE A;  3VDP A;  1KBE A;  2GVI A;  4UXH A;  2QQD A;  3TOB A;  1MJA A;  1HDL A;  2KMR A;  1MJ9 A;  2JA1 A;  1X74 A;  3PDN A;  1Z2I A;  2ARP F;  1OVO A;  1ULM A;  2F3C I;  2NU2 I;  3QTL D;  1KBF A;  3TO9 A;  2DIP A;  5FUY A;  4A24 A;  1DS3 I;  3OVO A;  1CT0 I;  1S20 A;  1UVF A;  1BMO A;  1Z7K B;  2V1C A;  5HQ8 A;  1M8B A;  2J9R A;  1CE3 A;  3FSY A;  3OXL A;  3TOA A;  2L7X A;  3SGQ I;  2L8E A;  2KCX A;  2FNF X;  2OD1 A;  1OYV I;  1TBN A;  1MJB A;  2SGF I;  1Q9B A;  9WGA A;  1CGI I;  4GI3 C;  7WGA A;  2B0U C;  2GKR I;  5FUW A;  1WKX A;  2X3T A;  2SGP I;  1IW4 A;  1LR9 A;  1OMT A;  1V1H A;  5DAE A;  3UGL A;  3R5D A;  2WGC A;  2N1A B;  1LR7 A;  2DB6 A;  1U5K A;  1R0R I;  2WCY A;  2E5R A;  3OXF A;  1LR8 A;  4OVO A;  2CJS C;  1WGT A;  2QQ0 A;  2ENZ A;  2OVO A;  4B6D A;  5J8C A;  1MT1 A;  5FUV A;  1FAR A;  3TO7 A;  2JYY A;  2CWF A;  2NU1 I;  1WTJ A;  1TGS I;  2ODD A;  2CWH A;  3QAH A;  3R5A A;  2SGE I;  5E3Q A;  1AN1 I;  1FYB A;  1KMA A;  1CSO I;  1M8C A;  2J87 A;  2CWG A;  2X52 A;  2JW6 A;  3SGB I;  4WP4 A;  3UGI A;  4JCV E;  2B8T A;  1W3S A;  2ROW A;  2UVO A;  5E3P A;  2YQP A;  4UXI A;  1FY7 A;  3RU0 A;  2LUY A;  2ORV A;  1TBR R;  2N17 A;  2ERW A;  4E1R A;  4L9M A;  2ENN A;  1P9Z A;  3VDU A;  2XRC A;  3R5C A;  1WGC A;  2SGD I;  2K9H A;  2YUU A;  1K7U A;  1K7T A;  1UUC A;  1R79 A;  5CCL A;  2GKT I;  3TO6 A;  3TJQ A;  5CCM A;  1K7V A; 
#chains in the Genus database with same CATH homology
 1CGJ I;  1XBT A;  5FUX A;  3UEY A;  1Y1B A;  2UZ3 A;  1IY5 A;  3HH2 C;  1YTP A;  1CHO I;  2NU4 I;  2KMP A;  3VE5 A;  4SGB I;  1Y8F A;  3CXL A;  1CT4 I;  1FAQ A;  1SGE I;  5JHW C;  1VDD A;  2NU0 I;  5EX3 A;  3E59 A;  3OXG A;  3UFF A;  2A20 A;  2NU3 I;  1TUR A;  2N71 A;  1XA6 A;  5HI7 A;  1TBQ R;  1TBO A;  2KMO A;  2JZM A;  1OMU A;  2V1C C;  1PPF I;  2WVJ A;  3BJI A;  3UGD A;  3QWP A;  3MEK A;  1PCE A;  2KMQ A;  2ELI A;  4UXJ A;  2V53 A;  2GKV A;  1X4S A;  1Y1C A;  2P6A C;  1H0Z A;  1HJA I;  1YU6 C;  1XX6 A;  2ORW A;  1PTQ A;  2E73 A;  4FKD A;  1SGQ I;  1TIH A;  1RFH A;  2W0T A;  1CT2 I;  1UVG A;  2N52 A;  2QQE A;  1BUS A;  3FC3 A;  2M5X A;  1IY6 A;  3UEJ A;  1N13 A;  1TOT A;  3GOX A;  1V1I A;  1SGR I;  1SGN I;  2QQC A;  1W4R A;  2JXD A;  3D00 A;  3SEK C;  4HGU A;  2LEO A;  1PTR A;  1NUB A;  1SGY I;  3KY9 A;  1DS2 I;  3OL0 A;  1TUS A;  1HPT A;  3B4V C;  4E1P A;  2QPO A;  5EX0 A;  1PJU A;  2SGQ I;  1SGP I;  1SGD I;  2BUS A;  2VRW B;  3E2I A;  3VDP A;  1KBE A;  2GVI A;  4UXH A;  2QQD A;  1HDL A;  2KMR A;  2JA1 A;  1X74 A;  3PDN A;  3QTL D;  2ARP F;  1OVO A;  2F3C I;  2NU2 I;  3UGI A;  1KBF A;  2DIP A;  5FUY A;  4A24 A;  1DS3 I;  3OVO A;  1CT0 I;  1UVF A;  1BMO A;  1Z7K B;  2V1C A;  5HQ8 A;  1M8B A;  2J9R A;  1CE3 A;  3OXL A;  2L7X A;  3SGQ I;  2L8E A;  2KCX A;  2FNF X;  2OD1 A;  1OYV I;  1TBN A;  2SGF I;  1CGI I;  4GI3 C;  2B0U C;  2GKR I;  5FUW A;  2SGP I;  1IW4 A;  1LR9 A;  1OMT A;  1V1H A;  5DAE A;  3UGL A;  2N1A B;  1LR7 A;  2DB6 A;  1U5K A;  1R0R I;  2WCY A;  2E5R A;  3OXF A;  1LR8 A;  4OVO A;  2CJS C;  2QQ0 A;  2ENZ A;  2OVO A;  4B6D A;  1MT1 A;  5FUV A;  1FAR A;  2JYY A;  2NU1 I;  1TGS I;  2ODD A;  2SGE I;  1AN1 I;  1FYB A;  1KMA A;  1CSO I;  1M8C A;  2J87 A;  3SGB I;  2JW6 A;  4JCV E;  2B8T A;  1W3S A;  2ROW A;  2YQP A;  4UXI A;  3RU0 A;  2LUY A;  2ORV A;  1TBR R;  2N17 A;  2ERW A;  4E1R A;  4L9M A;  2ENN A;  3VDU A;  2XRC A;  2SGD I;  2K9H A;  2YUU A;  1UUC A;  1R79 A;  5CCL A;  2GKT I;  3TJQ A;  5CCM A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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