1IY6A

Solution structure of omsvp3 variant, p14c/n39c
Total Genus 10
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
10
sequence length
54
structure length
54
Chain Sequence
AVSVDCSEYPKCACTMEYRPLCGSDNKTYGNKCNFCCAVVESNGTLTLSHFGKC
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Inhibitory Specificity Change of Ovomucoid Third Domain of the Silver Pheasant upon Introduction of an Engineered Cys14-Cys39 Bond
pubmed doi rcsb
molecule tags Hydrolase
source organism Lophura nycthemera
molecule keywords OMSVP3
total genus 10
structure length 54
sequence length 54
ec nomenclature
pdb deposition date 2002-07-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1iy6A00
2SGFI 1TIHA 2KMQA 2N17A 1IY5A 1R0RI 3B4VC 1YTPA 1BMOA 1DS3I 2NU4I 1DS2I 2NU2I 1LR9A 1PCEA 1TBQR 2OVOA 1Y1BA 2ERWA 1CGJI 1CT0I 1SGRI 1TBRR 2QQCA 2SGDI 1N13A 1OYVI 4OVOA 2N52A 2LEOA 1SGEI 1Z7KB 4HGUA 2B0UC 2KMOA 2GKVA 1M8CA 2V53A 1M8BA 1FYBA 2QQDA 3QTLD 1HJAI 1YU6C 2KCXA 3SGBI 2F3CI 1MT1A 1TUSA 2SGEI 1SGNI 1CHOI 1SGYI 2WCYA 1SGPI 2JXDA 1CT4I 1BUSA 1H0ZA 2KMRA 2NU3I 3TJQA 1UUCA 1IY6A 1AN1I 1OMUA 1CGII 4GI3C 1NUBA 2XRCA 1CSOI 1HPTA 1IW4A 1PJUA 1SGDI 2N71A 3OVOA 1UVFA 1OVOA 2SGQI 5JHWC 2GKTI 1PPFI 2BUSA 2NU1I 1CT2I 1CE3A 1Y1CA 2JYYA 1SGQI 2GKRI 4SGBI 1LR8A 1TURA 1OMTA 5DAEA 3SGQI 3HH2C 2P6AC 1HDLA 3SEKC 2JZMA 2ARPF 1UVGA 1KMAA 2M5XA 1TGSI 2NU0I 2SGPI 1LR7A 2KMPA
chains in the Genus database with same CATH superfamily
2SGFI 1TBNA 1TIHA 2LUYA 2W0TA 2KMQA 2N17A 1IY5A 3OXLA 1R0RI 3B4VC 1YTPA 3UFFA 4E1PA 1BMOA 1DS3I 2CWGA 2NU4I 1DS2I 1NXUA 1VDDA 3R5AA 2NU2I 1LR9A 2YUUA 1PCEA 2K9HA 3QAHA 4JCVE 3UOEA 3FC3A 1TBQR 1V1HA 2OVOA 1FARA 3UEJA 1Y1BA 3E2IA 2ENZA 2ERWA 1CGJI 4UXIA 2QPOA 2DB6A 5CCLA 1CT0I 1SGRI 1Y8FA 1TBRR 2QQCA 1HEVA 2V1CA 1TOTA 5FUVA 5FUWA 1X74A 1N13A 2SGDI 5EX3A 2CJSC 1OYVI 4E1RA 1WGCA 2ODDA 3GOXA 2V1CC 2CWHA 5E3QA 4A24A 4OVOA 2N52A 2LEOA 2PQ8A 1MJAA 1XBTA 4MPIA 3TO7A 1SGEI 1Z7KB 3TOBA 2UZ3A 2E5RA 1X4SA 1Z2IA 4HGUA 1PTQA 3UGIA 1UHAA 2B0UC 2KMOA 1FY7A 2DIPA 2GKVA 1M8CA 1K7VA 2V53A 3R5BA 5HI7A 3UGDA 1FAQA 1M8BA 1WKXA 3TO9A 7WGAA 1MJ9A 2X52A 1FYBA 2QQDA 3QTLD 1HJAI 1YU6C 2JA1A 2KCXA 3OXFA 9WGAA 3SGBI 4B6DA 2F3CI 3PDNA 1MT1A 1U5KA 2ORWA 3FSYA 1TUSA 2SGEI 1SGNI 2ROWA 4FKDA 4DNCA 4UXHA 1CHOI 1SGYI 2UVOA 2YQPA 1ULMA 1SGPI 1XX6A 2WCYA 2JW6A 2JXDA 5J8FA 2OD1A 1KBFA 3OL0A 3E59A 4AMLA 1CT4I 1BUSA 1W4RA 1H0ZA 5HQ8A 3KY9A 2KMRA 5FUXA 3R5CA 2NU3I 2CWFA 1MJBA 3CXLA 2E73A 3OXGA 2GVIA 2RIJA 3TJQA 3RU0A 1UUCA 3TOAA 5EX0A 2RC4A 5E3RA 1IY6A 2L7XA 2ELIA 2OU2A 3VDPA 1AN1I 2VRWB 1OMUA 2J87A 1CGII 2WVJA 3MEKA 3QWPA 1NUBA 4GI3C 2FNFX 1Q9BA 2XRCA 1CSOI 3TO6A 1HPTA 1S20A 1XA6A 4UXJA 1WGTA 3BJIA 1IW4A 1K7TA 1P9ZA 1PJUA 1SGDI 2N71A 3VDUA 3OVOA 2QQEA 1UVFA 1OVOA 2N1AB 1W3SA 5CCMA 2NU0I 2DKVA 1PTRA 2ENNA 3UEYA 2LB7A 2Y0MA 2SGQI 5JHWC 2GKTI 1WTJA 1V1IA 1PPFI 2BUSA 5J8CA 2NU1I 1CT2I 1P9GA 1CE3A 4WP4A 2L8EA 1Y1CA 2JYYA 2ORVA 3FSXA 2GKRI 4SGBI 2A20A 1K7UA 1KBEA 1LR8A 2GIVA 1TURA 1OMTA 1R79A 5DAEA 5FUYA 1ULKA 3SGQI 1RFHA 4L9MA 2QQ0A 2B8TA 2P6AC 3HH2C 3VE5A 1HDLA 3R5DA 3SEKC 2JZMA 3UGLA 2WGCA 3D00A 2ARPF 1ULNA 1UVGA 5E3PA 1KMAA 2M5XA 1TGSI 2OZUA 2X3TA 1TBOA 1SGQI 2SGPI 1LR7A 2J9RA 2KMPA
chains in the Genus database with same CATH topology
2SGFI 1TBNA 1TIHA 2LUYA 2W0TA 2KMQA 2N17A 1IY5A 3OXLA 1R0RI 3B4VC 1YTPA 3UFFA 4E1PA 1BMOA 1DS3I 2NU4I 1DS2I 1VDDA 2NU2I 1LR9A 2YUUA 1PCEA 2K9HA 4JCVE 3FC3A 1TBQR 1V1HA 2OVOA 1FARA 3UEJA 1Y1BA 3E2IA 2ENZA 2ERWA 1CGJI 4UXIA 2QPOA 2DB6A 5CCLA 1CT0I 1SGRI 1Y8FA 1TBRR 2QQCA 2V1CA 1TOTA 5FUVA 5FUWA 1X74A 1N13A 2SGDI 5EX3A 2CJSC 1OYVI 4E1RA 2ODDA 3GOXA 2V1CC 4A24A 4OVOA 2N52A 2LEOA 1XBTA 1SGEI 1Z7KB 2UZ3A 2E5RA 1X4SA 4HGUA 3UGIA 1PTQA 2B0UC 2KMOA 2DIPA 2GKVA 1M8CA 2V53A 3UGDA 5HI7A 1FAQA 1M8BA 1FYBA 2QQDA 3QTLD 1HJAI 1YU6C 2JA1A 2KCXA 3OXFA 3SGBI 4B6DA 2F3CI 3PDNA 1MT1A 1U5KA 2ORWA 1TUSA 2SGEI 1SGNI 2ROWA 4FKDA 4UXHA 1CHOI 1SGYI 2YQPA 1XX6A 1SGPI 2WCYA 2JW6A 2JXDA 1KBFA 2OD1A 3OL0A 3E59A 1CT4I 1BUSA 1W4RA 1H0ZA 5HQ8A 3KY9A 2KMRA 5FUXA 2NU3I 3CXLA 3OXGA 2E73A 2GVIA 3TJQA 3RU0A 1UUCA 5EX0A 1IY6A 2L7XA 2ELIA 3VDPA 1AN1I 2VRWB 1OMUA 2J87A 1CGII 2WVJA 3MEKA 3QWPA 1NUBA 4GI3C 2FNFX 2XRCA 1CSOI 1HPTA 4UXJA 1XA6A 3BJIA 1IW4A 1PJUA 1SGDI 2N71A 3VDUA 3OVOA 2QQEA 1UVFA 1OVOA 2N1AB 1W3SA 5CCMA 2NU0I 1PTRA 2ENNA 3UEYA 2SGQI 5JHWC 2GKTI 1V1IA 1PPFI 2BUSA 2NU1I 1CT2I 1CE3A 2L8EA 1Y1CA 2JYYA 2ORVA 2GKRI 4SGBI 2A20A 1KBEA 1LR8A 1TURA 1OMTA 1R79A 5DAEA 5FUYA 3SGQI 1RFHA 4L9MA 2QQ0A 2B8TA 2P6AC 3HH2C 3VE5A 1HDLA 3SEKC 2JZMA 3UGLA 3D00A 2ARPF 1UVGA 1KMAA 2M5XA 1TGSI 1TBOA 1SGQI 2SGPI 1LR7A 2J9RA 2KMPA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2SGF I;  1TIH A;  2KMQ A;  2N17 A;  1IY5 A;  1R0R I;  3B4V C;  1YTP A;  1BMO A;  1DS3 I;  2NU4 I;  1DS2 I;  2NU2 I;  1LR9 A;  1PCE A;  1TBQ R;  2OVO A;  1Y1B A;  2ERW A;  1CGJ I;  1CT0 I;  1SGR I;  1TBR R;  2QQC A;  2SGD I;  1N13 A;  1OYV I;  4OVO A;  2N52 A;  2LEO A;  1SGE I;  1Z7K B;  4HGU A;  2B0U C;  2KMO A;  2GKV A;  1M8C A;  2V53 A;  1M8B A;  1FYB A;  2QQD A;  3QTL D;  1HJA I;  1YU6 C;  2KCX A;  3SGB I;  2F3C I;  1MT1 A;  1TUS A;  2SGE I;  1SGN I;  1CHO I;  1SGY I;  2WCY A;  1SGP I;  2JXD A;  1CT4 I;  1BUS A;  1H0Z A;  2KMR A;  2NU3 I;  3TJQ A;  1UUC A;  1IY6 A;  1AN1 I;  1OMU A;  1CGI I;  4GI3 C;  1NUB A;  2XRC A;  1CSO I;  1HPT A;  1IW4 A;  1PJU A;  1SGD I;  2N71 A;  3OVO A;  1UVF A;  1OVO A;  2SGQ I;  5JHW C;  2GKT I;  1PPF I;  2BUS A;  2NU1 I;  1CT2 I;  1CE3 A;  1Y1C A;  2JYY A;  1SGQ I;  2GKR I;  4SGB I;  1LR8 A;  1TUR A;  1OMT A;  5DAE A;  3SGQ I;  3HH2 C;  2P6A C;  1HDL A;  3SEK C;  2JZM A;  2ARP F;  1UVG A;  1KMA A;  2M5X A;  1TGS I;  2NU0 I;  2SGP I;  1LR7 A;  2KMP A; 
#chains in the Genus database with same CATH topology
 2SGF I;  1TBN A;  1TIH A;  2LUY A;  2W0T A;  2KMQ A;  2N17 A;  1IY5 A;  3OXL A;  1R0R I;  3B4V C;  1YTP A;  3UFF A;  4E1P A;  1BMO A;  1DS3 I;  2CWG A;  2NU4 I;  1DS2 I;  1NXU A;  1VDD A;  3R5A A;  2NU2 I;  1LR9 A;  2YUU A;  1PCE A;  2K9H A;  3QAH A;  4JCV E;  3UOE A;  3FC3 A;  1TBQ R;  1V1H A;  2OVO A;  1FAR A;  3UEJ A;  1Y1B A;  3E2I A;  2ENZ A;  2ERW A;  1CGJ I;  4UXI A;  2QPO A;  2DB6 A;  5CCL A;  1CT0 I;  1SGR I;  1Y8F A;  1TBR R;  2QQC A;  1HEV A;  2V1C A;  1TOT A;  5FUV A;  5FUW A;  1X74 A;  1N13 A;  2SGD I;  5EX3 A;  2CJS C;  1OYV I;  4E1R A;  1WGC A;  2ODD A;  3GOX A;  2V1C C;  2CWH A;  5E3Q A;  4A24 A;  4OVO A;  2N52 A;  2LEO A;  2PQ8 A;  1MJA A;  1XBT A;  4MPI A;  3TO7 A;  1SGE I;  1Z7K B;  3TOB A;  2UZ3 A;  2E5R A;  1X4S A;  1Z2I A;  4HGU A;  1PTQ A;  3UGI A;  1UHA A;  2B0U C;  2KMO A;  1FY7 A;  2DIP A;  2GKV A;  1M8C A;  1K7V A;  2V53 A;  3R5B A;  5HI7 A;  3UGD A;  1FAQ A;  1M8B A;  1WKX A;  3TO9 A;  7WGA A;  1MJ9 A;  2X52 A;  1FYB A;  2QQD A;  3QTL D;  1HJA I;  1YU6 C;  2JA1 A;  2KCX A;  3OXF A;  9WGA A;  3SGB I;  4B6D A;  2F3C I;  3PDN A;  1MT1 A;  1U5K A;  2ORW A;  3FSY A;  1TUS A;  2SGE I;  1SGN I;  2ROW A;  4FKD A;  4DNC A;  4UXH A;  1CHO I;  1SGY I;  2UVO A;  2YQP A;  1ULM A;  1SGP I;  1XX6 A;  2WCY A;  2JW6 A;  2JXD A;  5J8F A;  2OD1 A;  1KBF A;  3OL0 A;  3E59 A;  4AML A;  1CT4 I;  1BUS A;  1W4R A;  1H0Z A;  5HQ8 A;  3KY9 A;  2KMR A;  5FUX A;  3R5C A;  2NU3 I;  2CWF A;  1MJB A;  3CXL A;  2E73 A;  3OXG A;  2GVI A;  2RIJ A;  3TJQ A;  3RU0 A;  1UUC A;  3TOA A;  5EX0 A;  2RC4 A;  5E3R A;  1IY6 A;  2L7X A;  2ELI A;  2OU2 A;  3VDP A;  1AN1 I;  2VRW B;  1OMU A;  2J87 A;  1CGI I;  2WVJ A;  3MEK A;  3QWP A;  1NUB A;  4GI3 C;  2FNF X;  1Q9B A;  2XRC A;  1CSO I;  3TO6 A;  1HPT A;  1S20 A;  1XA6 A;  4UXJ A;  1WGT A;  3BJI A;  1IW4 A;  1K7T A;  1P9Z A;  1PJU A;  1SGD I;  2N71 A;  3VDU A;  3OVO A;  2QQE A;  1UVF A;  1OVO A;  2N1A B;  1W3S A;  5CCM A;  2NU0 I;  2DKV A;  1PTR A;  2ENN A;  3UEY A;  2LB7 A;  2Y0M A;  2SGQ I;  5JHW C;  2GKT I;  1WTJ A;  1V1I A;  1PPF I;  2BUS A;  5J8C A;  2NU1 I;  1CT2 I;  1P9G A;  1CE3 A;  4WP4 A;  2L8E A;  1Y1C A;  2JYY A;  2ORV A;  3FSX A;  2GKR I;  4SGB I;  2A20 A;  1K7U A;  1KBE A;  1LR8 A;  2GIV A;  1TUR A;  1OMT A;  1R79 A;  5DAE A;  5FUY A;  1ULK A;  3SGQ I;  1RFH A;  4L9M A;  2QQ0 A;  2B8T A;  2P6A C;  3HH2 C;  3VE5 A;  1HDL A;  3R5D A;  3SEK C;  2JZM A;  3UGL A;  2WGC A;  3D00 A;  2ARP F;  1ULN A;  1UVG A;  5E3P A;  1KMA A;  2M5X A;  1TGS I;  2OZU A;  2X3T A;  1TBO A;  1SGQ I;  2SGP I;  1LR7 A;  2J9R A;  2KMP A; 
#chains in the Genus database with same CATH homology
 2SGF I;  1TBN A;  1TIH A;  2LUY A;  2W0T A;  2KMQ A;  2N17 A;  1IY5 A;  3OXL A;  1R0R I;  3B4V C;  1YTP A;  3UFF A;  4E1P A;  1BMO A;  1DS3 I;  2NU4 I;  1DS2 I;  1VDD A;  2NU2 I;  1LR9 A;  2YUU A;  1PCE A;  2K9H A;  4JCV E;  3FC3 A;  1TBQ R;  1V1H A;  2OVO A;  1FAR A;  3UEJ A;  1Y1B A;  3E2I A;  2ENZ A;  2ERW A;  1CGJ I;  4UXI A;  2QPO A;  2DB6 A;  5CCL A;  1CT0 I;  1SGR I;  1Y8F A;  1TBR R;  2QQC A;  2V1C A;  1TOT A;  5FUV A;  5FUW A;  1X74 A;  1N13 A;  2SGD I;  5EX3 A;  2CJS C;  1OYV I;  4E1R A;  2ODD A;  3GOX A;  2V1C C;  4A24 A;  4OVO A;  2N52 A;  2LEO A;  1XBT A;  1SGE I;  1Z7K B;  2UZ3 A;  2E5R A;  1X4S A;  4HGU A;  3UGI A;  1PTQ A;  2B0U C;  2KMO A;  2DIP A;  2GKV A;  1M8C A;  2V53 A;  3UGD A;  5HI7 A;  1FAQ A;  1M8B A;  1FYB A;  2QQD A;  3QTL D;  1HJA I;  1YU6 C;  2JA1 A;  2KCX A;  3OXF A;  3SGB I;  4B6D A;  2F3C I;  3PDN A;  1MT1 A;  1U5K A;  2ORW A;  1TUS A;  2SGE I;  1SGN I;  2ROW A;  4FKD A;  4UXH A;  1CHO I;  1SGY I;  2YQP A;  1XX6 A;  1SGP I;  2WCY A;  2JW6 A;  2JXD A;  1KBF A;  2OD1 A;  3OL0 A;  3E59 A;  1CT4 I;  1BUS A;  1W4R A;  1H0Z A;  5HQ8 A;  3KY9 A;  2KMR A;  5FUX A;  2NU3 I;  3CXL A;  3OXG A;  2E73 A;  2GVI A;  3TJQ A;  3RU0 A;  1UUC A;  5EX0 A;  1IY6 A;  2L7X A;  2ELI A;  3VDP A;  1AN1 I;  2VRW B;  1OMU A;  2J87 A;  1CGI I;  2WVJ A;  3MEK A;  3QWP A;  1NUB A;  4GI3 C;  2FNF X;  2XRC A;  1CSO I;  1HPT A;  4UXJ A;  1XA6 A;  3BJI A;  1IW4 A;  1PJU A;  1SGD I;  2N71 A;  3VDU A;  3OVO A;  2QQE A;  1UVF A;  1OVO A;  2N1A B;  1W3S A;  5CCM A;  2NU0 I;  1PTR A;  2ENN A;  3UEY A;  2SGQ I;  5JHW C;  2GKT I;  1V1I A;  1PPF I;  2BUS A;  2NU1 I;  1CT2 I;  1CE3 A;  2L8E A;  1Y1C A;  2JYY A;  2ORV A;  2GKR I;  4SGB I;  2A20 A;  1KBE A;  1LR8 A;  1TUR A;  1OMT A;  1R79 A;  5DAE A;  5FUY A;  3SGQ I;  1RFH A;  4L9M A;  2QQ0 A;  2B8T A;  2P6A C;  3HH2 C;  3VE5 A;  1HDL A;  3SEK C;  2JZM A;  3UGL A;  3D00 A;  2ARP F;  1UVG A;  1KMA A;  2M5X A;  1TGS I;  1TBO A;  1SGQ I;  2SGP I;  1LR7 A;  2J9R A;  2KMP A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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