1OVOA

Crystallographic refinement of japanese quail ovomucoid, a kazal-type inhibitor, and model building studies of complexes with serine proteases
Total Genus 10
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
10
sequence length
56
structure length
56
Chain Sequence
LAAVSVDCSEYPKPACPKDYRPVCGSDNKTYSNKCNFCNAVVESNGTLTLNHFGKC
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Proteinase inhibitor (kazal)
source organism Coturnix japonica
publication title Crystallographic refinement of Japanese quail ovomucoid, a Kazal-type inhibitor, and model building studies of complexes with serine proteases.
pubmed doi rcsb
molecule keywords OVOMUCOID THIRD DOMAIN
total genus 10
structure length 56
sequence length 56
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 1982-01-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1ovoA00
1TURA 1YTPA 2ERWA 1SGEI 1R0RI 2KMOA 1YU6C 1HDLA 1PPFI 3SGQI 1DS3I 2KMPA 2V53A 1LR7A 1SGRI 1Z7KB 1SGDI 2GKVA 3TJQA 1UUCA 1UVFA 2KMRA 2GKTI 1KMAA 2NU2I 1BUSA 1PJUA 4OVOA 1IY6A 1OYVI 1TBRR 2M5XA 1HPTA 2NU3I 2SGDI 3HH2C 2ARPF 4SGBI 1CT2I 1OVOA 2QQCA 4HGUA 2LEOA 3QTLD 4GI3C 1IW4A 2P6AC 1AN1I 1IY5A 2N17A 3B4VC 3OVOA 1BMOA 1MT1A 1DS2I 1M8BA 2GKRI 1CT4I 1PCEA 1TGSI 2N71A 1FYBA 1LR9A 1SGYI 1OMUA 1CHOI 1OMTA 1CGII 1CGJI 1HJAI 2NU0I 3SEKC 2OVOA 2JYYA 2NU4I 1NUBA 2KMQA 2BUSA 1CSOI 2WCYA 1TIHA 2B0UC 1Y1CA 1TBQR 2SGFI 2JXDA 2N52A 1UVGA 1SGPI 1N13A 1M8CA 2XRCA 2SGQI 1H0ZA 1CT0I 5DAEA 2SGPI 1CE3A 2SGEI 1TUSA 2JZMA 5JHWC 2F3CI 1LR8A 1SGNI 1Y1BA 2KCXA 3SGBI 1SGQI 2NU1I 2QQDA
chains in the Genus database with same CATH superfamily
2OD1A 1TURA 4WP4A 1Y8FA 1YTPA 2L7XA 4A24A 2ERWA 2ORWA 3TOAA 1SGEI 3OXGA 5CCLA 3UEYA 4E1PA 1R0RI 2KMOA 2GVIA 5HI7A 1YU6C 3VE5A 1HDLA 2FNFX 1PPFI 2V1CA 2QQEA 1XA6A 2DB6A 3R5AA 3SGQI 4AMLA 1WKXA 1DS3I 2KMPA 2V53A 1LR7A 4B6DA 1R79A 1SGRI 1XBTA 1Z7KB 5FUWA 3QWPA 5CCMA 1SGDI 2GKVA 3TJQA 1HEVA 1UUCA 1UVFA 2KMRA 2ODDA 2V1CC 5J8FA 1UHAA 2GKTI 4UXJA 1KMAA 2NU2I 1BUSA 1PJUA 2E5RA 4OVOA 1IY6A 1OYVI 1TBRR 2M5XA 2OZUA 1HPTA 1MJ9A 1W3SA 3QAHA 2NU3I 2SGDI 3HH2C 2NU1I 3TO6A 2ARPF 2QPOA 3FSXA 3FSYA 4SGBI 3TOBA 2J87A 1V1HA 1CT2I 1OVOA 1FY7A 2DKVA 2QQCA 9WGAA 4HGUA 3OL0A 1P9ZA 2LEOA 3QTLD 3VDUA 4GI3C 3BJIA 1PTQA 1ULKA 1IW4A 4JCVE 2P6AC 1AN1I 1KBFA 5FUXA 2ENZA 2B8TA 2K9HA 2N17A 3E59A 7WGAA 3UGLA 3GOXA 1IY5A 1X4SA 2CWGA 1TBOA 2LUYA 3UFFA 3VDPA 2VRWB 3B4VC 4DNCA 3OVOA 1K7TA 3UOEA 1KBEA 1XX6A 1S20A 1PTRA 4L9MA 1U5KA 1BMOA 2W0TA 3KY9A 3R5DA 1ULMA 3TO7A 5HQ8A 1MT1A 2JW6A 4UXHA 1DS2I 2J9RA 1M8BA 1CT4I 2GKRI 1PCEA 1TGSI 5E3RA 2N71A 2Y0MA 2YUUA 2CJSC 3MEKA 1FYBA 1TOTA 1LR9A 1X74A 1SGYI 1OMUA 1CHOI 1OMTA 1CGII 1CGJI 1HJAI 2NU0I 3SEKC 5EX0A 5FUVA 2OVOA 1MJAA 3RU0A 2PQ8A 4E1RA 1K7VA 2CWFA 2JYYA 2WVJA 3R5BA 3E2IA 2WGCA 3CXLA 2UVOA 2CWHA 2NU4I 1NUBA 2KMQA 1MJBA 3UGIA 5FUYA 2BUSA 1WTJA 2LB7A 1CSOI 4UXIA 1FAQA 2A20A 2WCYA 2GIVA 3OXFA 1TIHA 2B0UC 1Y1CA 1TBQR 2SGFI 1ULNA 2JXDA 2X3TA 1V1IA 5EX3A 1VDDA 2N52A 3PDNA 4MPIA 1FARA 1Q9BA 3OXLA 4FKDA 2YQPA 1W4RA 1UVGA 2ENNA 1SGPI 2N1AB 1N13A 1M8CA 2OU2A 3R5CA 2E73A 2XRCA 1P9GA 5E3PA 2ROWA 2ORVA 2SGQI 2RIJA 2X52A 1H0ZA 1CT0I 2UZ3A 1K7UA 2DIPA 1WGCA 2RC4A 5DAEA 2SGPI 5J8CA 1Z2IA 1TBNA 1TUSA 2JZMA 2SGEI 2F3CI 5E3QA 5JHWC 1CE3A 1WGTA 3UGDA 1RFHA 1LR8A 1NXUA 1SGNI 2ELIA 3TO9A 3FC3A 2QQ0A 1Y1BA 2KCXA 2L8EA 1SGQI 3SGBI 3UEJA 2JA1A 3D00A 2QQDA
chains in the Genus database with same CATH topology
2OD1A 1TURA 1Y8FA 1YTPA 2L7XA 4A24A 2ERWA 2ORWA 1SGEI 3OXGA 5CCLA 3UEYA 4E1PA 1R0RI 2KMOA 2GVIA 5HI7A 1YU6C 3VE5A 1HDLA 2FNFX 1PPFI 2V1CA 2QQEA 1XA6A 2DB6A 3SGQI 1DS3I 2KMPA 2V53A 1LR7A 4B6DA 1R79A 1SGRI 1XBTA 1Z7KB 5FUWA 3QWPA 5CCMA 1SGDI 2GKVA 3TJQA 1UUCA 1UVFA 2KMRA 2ODDA 2V1CC 2GKTI 4UXJA 1KMAA 2NU2I 1BUSA 1PJUA 2E5RA 4OVOA 1IY6A 1OYVI 1TBRR 2M5XA 1HPTA 1W3SA 2NU3I 2SGDI 3HH2C 2NU1I 2ARPF 2QPOA 4SGBI 2J87A 1V1HA 1CT2I 1OVOA 2QQCA 4HGUA 3OL0A 2LEOA 3QTLD 3VDUA 4GI3C 3BJIA 1PTQA 1IW4A 4JCVE 2P6AC 1AN1I 1KBFA 5FUXA 2ENZA 2B8TA 2K9HA 2N17A 3E59A 3GOXA 3UGLA 1IY5A 1X4SA 1TBOA 2LUYA 3UFFA 3VDPA 2VRWB 3B4VC 3OVOA 1KBEA 1XX6A 1PTRA 4L9MA 1U5KA 1BMOA 2W0TA 3KY9A 5HQ8A 1MT1A 2JW6A 4UXHA 1DS2I 2J9RA 1M8BA 1CT4I 2GKRI 1PCEA 1TGSI 2N71A 2YUUA 2CJSC 3MEKA 1FYBA 1TOTA 1LR9A 1X74A 1SGYI 1OMUA 1CHOI 1OMTA 1CGII 1CGJI 1HJAI 2NU0I 3SEKC 5EX0A 5FUVA 2OVOA 3RU0A 4E1RA 2JYYA 2WVJA 3E2IA 3CXLA 2NU4I 1NUBA 2KMQA 3UGIA 5FUYA 2BUSA 1CSOI 4UXIA 1FAQA 2A20A 2WCYA 3OXFA 1TIHA 2B0UC 1Y1CA 1TBQR 2SGFI 2JXDA 1V1IA 5EX3A 1VDDA 2N52A 3PDNA 1FARA 3OXLA 4FKDA 2YQPA 1W4RA 1UVGA 2ENNA 1SGPI 2N1AB 1N13A 1M8CA 2E73A 2XRCA 2ROWA 2ORVA 2SGQI 1H0ZA 1CT0I 2UZ3A 2DIPA 5DAEA 2SGPI 1CE3A 2SGEI 1TBNA 1TUSA 2JZMA 5JHWC 2F3CI 3UGDA 1RFHA 1LR8A 1SGNI 2ELIA 3FC3A 2QQ0A 1Y1BA 2KCXA 2L8EA 1SGQI 3SGBI 3UEJA 2JA1A 3D00A 2QQDA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1TUR A;  1YTP A;  2ERW A;  1SGE I;  1R0R I;  2KMO A;  1YU6 C;  1HDL A;  1PPF I;  3SGQ I;  1DS3 I;  2KMP A;  2V53 A;  1LR7 A;  1SGR I;  1Z7K B;  1SGD I;  2GKV A;  3TJQ A;  1UUC A;  1UVF A;  2KMR A;  2GKT I;  1KMA A;  2NU2 I;  1BUS A;  1PJU A;  4OVO A;  1IY6 A;  1OYV I;  1TBR R;  2M5X A;  1HPT A;  2NU3 I;  2SGD I;  3HH2 C;  2ARP F;  4SGB I;  1CT2 I;  1OVO A;  2QQC A;  4HGU A;  2LEO A;  3QTL D;  4GI3 C;  1IW4 A;  2P6A C;  1AN1 I;  1IY5 A;  2N17 A;  3B4V C;  3OVO A;  1BMO A;  1MT1 A;  1DS2 I;  1M8B A;  2GKR I;  1CT4 I;  1PCE A;  1TGS I;  2N71 A;  1FYB A;  1LR9 A;  1SGY I;  1OMU A;  1CHO I;  1OMT A;  1CGI I;  1CGJ I;  1HJA I;  2NU0 I;  3SEK C;  2OVO A;  2JYY A;  2NU4 I;  1NUB A;  2KMQ A;  2BUS A;  1CSO I;  2WCY A;  1TIH A;  2B0U C;  1Y1C A;  1TBQ R;  2SGF I;  2JXD A;  2N52 A;  1UVG A;  1SGP I;  1N13 A;  1M8C A;  2XRC A;  2SGQ I;  1H0Z A;  1CT0 I;  5DAE A;  2SGP I;  1CE3 A;  2SGE I;  1TUS A;  2JZM A;  5JHW C;  2F3C I;  1LR8 A;  1SGN I;  1Y1B A;  2KCX A;  3SGB I;  1SGQ I;  2NU1 I;  2QQD A; 
#chains in the Genus database with same CATH topology
 2OD1 A;  1TUR A;  4WP4 A;  1Y8F A;  1YTP A;  2L7X A;  4A24 A;  2ERW A;  2ORW A;  3TOA A;  1SGE I;  3OXG A;  5CCL A;  3UEY A;  4E1P A;  1R0R I;  2KMO A;  2GVI A;  5HI7 A;  1YU6 C;  3VE5 A;  1HDL A;  2FNF X;  1PPF I;  2V1C A;  2QQE A;  1XA6 A;  2DB6 A;  3R5A A;  3SGQ I;  4AML A;  1WKX A;  1DS3 I;  2KMP A;  2V53 A;  1LR7 A;  4B6D A;  1R79 A;  1SGR I;  1XBT A;  1Z7K B;  5FUW A;  3QWP A;  5CCM A;  1SGD I;  2GKV A;  3TJQ A;  1HEV A;  1UUC A;  1UVF A;  2KMR A;  2ODD A;  2V1C C;  5J8F A;  1UHA A;  2GKT I;  4UXJ A;  1KMA A;  2NU2 I;  1BUS A;  1PJU A;  2E5R A;  4OVO A;  1IY6 A;  1OYV I;  1TBR R;  2M5X A;  2OZU A;  1HPT A;  1MJ9 A;  1W3S A;  3QAH A;  2NU3 I;  2SGD I;  3HH2 C;  2NU1 I;  3TO6 A;  2ARP F;  2QPO A;  3FSX A;  3FSY A;  4SGB I;  3TOB A;  2J87 A;  1V1H A;  1CT2 I;  1OVO A;  1FY7 A;  2DKV A;  2QQC A;  9WGA A;  4HGU A;  3OL0 A;  1P9Z A;  2LEO A;  3QTL D;  3VDU A;  4GI3 C;  3BJI A;  1PTQ A;  1ULK A;  1IW4 A;  4JCV E;  2P6A C;  1AN1 I;  1KBF A;  5FUX A;  2ENZ A;  2B8T A;  2K9H A;  2N17 A;  3E59 A;  7WGA A;  3UGL A;  3GOX A;  1IY5 A;  1X4S A;  2CWG A;  1TBO A;  2LUY A;  3UFF A;  3VDP A;  2VRW B;  3B4V C;  4DNC A;  3OVO A;  1K7T A;  3UOE A;  1KBE A;  1XX6 A;  1S20 A;  1PTR A;  4L9M A;  1U5K A;  1BMO A;  2W0T A;  3KY9 A;  3R5D A;  1ULM A;  3TO7 A;  5HQ8 A;  1MT1 A;  2JW6 A;  4UXH A;  1DS2 I;  2J9R A;  1M8B A;  1CT4 I;  2GKR I;  1PCE A;  1TGS I;  5E3R A;  2N71 A;  2Y0M A;  2YUU A;  2CJS C;  3MEK A;  1FYB A;  1TOT A;  1LR9 A;  1X74 A;  1SGY I;  1OMU A;  1CHO I;  1OMT A;  1CGI I;  1CGJ I;  1HJA I;  2NU0 I;  3SEK C;  5EX0 A;  5FUV A;  2OVO A;  1MJA A;  3RU0 A;  2PQ8 A;  4E1R A;  1K7V A;  2CWF A;  2JYY A;  2WVJ A;  3R5B A;  3E2I A;  2WGC A;  3CXL A;  2UVO A;  2CWH A;  2NU4 I;  1NUB A;  2KMQ A;  1MJB A;  3UGI A;  5FUY A;  2BUS A;  1WTJ A;  2LB7 A;  1CSO I;  4UXI A;  1FAQ A;  2A20 A;  2WCY A;  2GIV A;  3OXF A;  1TIH A;  2B0U C;  1Y1C A;  1TBQ R;  2SGF I;  1ULN A;  2JXD A;  2X3T A;  1V1I A;  5EX3 A;  1VDD A;  2N52 A;  3PDN A;  4MPI A;  1FAR A;  1Q9B A;  3OXL A;  4FKD A;  2YQP A;  1W4R A;  1UVG A;  2ENN A;  1SGP I;  2N1A B;  1N13 A;  1M8C A;  2OU2 A;  3R5C A;  2E73 A;  2XRC A;  1P9G A;  5E3P A;  2ROW A;  2ORV A;  2SGQ I;  2RIJ A;  2X52 A;  1H0Z A;  1CT0 I;  2UZ3 A;  1K7U A;  2DIP A;  1WGC A;  2RC4 A;  5DAE A;  2SGP I;  5J8C A;  1Z2I A;  1TBN A;  1TUS A;  2JZM A;  2SGE I;  2F3C I;  5E3Q A;  5JHW C;  1CE3 A;  1WGT A;  3UGD A;  1RFH A;  1LR8 A;  1NXU A;  1SGN I;  2ELI A;  3TO9 A;  3FC3 A;  2QQ0 A;  1Y1B A;  2KCX A;  2L8E A;  1SGQ I;  3SGB I;  3UEJ A;  2JA1 A;  3D00 A;  2QQD A; 
#chains in the Genus database with same CATH homology
 2OD1 A;  1TUR A;  1Y8F A;  1YTP A;  2L7X A;  4A24 A;  2ERW A;  2ORW A;  1SGE I;  3OXG A;  5CCL A;  3UEY A;  4E1P A;  1R0R I;  2KMO A;  2GVI A;  5HI7 A;  1YU6 C;  3VE5 A;  1HDL A;  2FNF X;  1PPF I;  2V1C A;  2QQE A;  1XA6 A;  2DB6 A;  3SGQ I;  1DS3 I;  2KMP A;  2V53 A;  1LR7 A;  4B6D A;  1R79 A;  1SGR I;  1XBT A;  1Z7K B;  5FUW A;  3QWP A;  5CCM A;  1SGD I;  2GKV A;  3TJQ A;  1UUC A;  1UVF A;  2KMR A;  2ODD A;  2V1C C;  2GKT I;  4UXJ A;  1KMA A;  2NU2 I;  1BUS A;  1PJU A;  2E5R A;  4OVO A;  1IY6 A;  1OYV I;  1TBR R;  2M5X A;  1HPT A;  1W3S A;  2NU3 I;  2SGD I;  3HH2 C;  2NU1 I;  2ARP F;  2QPO A;  4SGB I;  2J87 A;  1V1H A;  1CT2 I;  1OVO A;  2QQC A;  4HGU A;  3OL0 A;  2LEO A;  3QTL D;  3VDU A;  4GI3 C;  3BJI A;  1PTQ A;  1IW4 A;  4JCV E;  2P6A C;  1AN1 I;  1KBF A;  5FUX A;  2ENZ A;  2B8T A;  2K9H A;  2N17 A;  3E59 A;  3GOX A;  3UGL A;  1IY5 A;  1X4S A;  1TBO A;  2LUY A;  3UFF A;  3VDP A;  2VRW B;  3B4V C;  3OVO A;  1KBE A;  1XX6 A;  1PTR A;  4L9M A;  1U5K A;  1BMO A;  2W0T A;  3KY9 A;  5HQ8 A;  1MT1 A;  2JW6 A;  4UXH A;  1DS2 I;  2J9R A;  1M8B A;  1CT4 I;  2GKR I;  1PCE A;  1TGS I;  2N71 A;  2YUU A;  2CJS C;  3MEK A;  1FYB A;  1TOT A;  1LR9 A;  1X74 A;  1SGY I;  1OMU A;  1CHO I;  1OMT A;  1CGI I;  1CGJ I;  1HJA I;  2NU0 I;  3SEK C;  5EX0 A;  5FUV A;  2OVO A;  3RU0 A;  4E1R A;  2JYY A;  2WVJ A;  3E2I A;  3CXL A;  2NU4 I;  1NUB A;  2KMQ A;  3UGI A;  5FUY A;  2BUS A;  1CSO I;  4UXI A;  1FAQ A;  2A20 A;  2WCY A;  3OXF A;  1TIH A;  2B0U C;  1Y1C A;  1TBQ R;  2SGF I;  2JXD A;  1V1I A;  5EX3 A;  1VDD A;  2N52 A;  3PDN A;  1FAR A;  3OXL A;  4FKD A;  2YQP A;  1W4R A;  1UVG A;  2ENN A;  1SGP I;  2N1A B;  1N13 A;  1M8C A;  2E73 A;  2XRC A;  2ROW A;  2ORV A;  2SGQ I;  1H0Z A;  1CT0 I;  2UZ3 A;  2DIP A;  5DAE A;  2SGP I;  1CE3 A;  2SGE I;  1TBN A;  1TUS A;  2JZM A;  5JHW C;  2F3C I;  3UGD A;  1RFH A;  1LR8 A;  1SGN I;  2ELI A;  3FC3 A;  2QQ0 A;  1Y1B A;  2KCX A;  2L8E A;  1SGQ I;  3SGB I;  3UEJ A;  2JA1 A;  3D00 A;  2QQD A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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