1OVOA

Crystallographic refinement of japanese quail ovomucoid, a kazal-type inhibitor, and model building studies of complexes with serine proteases
Total Genus 10
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
10
sequence length
56
structure length
56
Chain Sequence
LAAVSVDCSEYPKPACPKDYRPVCGSDNKTYSNKCNFCNAVVESNGTLTLNHFGKC
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Proteinase inhibitor (kazal)
source organism Coturnix japonica
publication title Crystallographic refinement of Japanese quail ovomucoid, a Kazal-type inhibitor, and model building studies of complexes with serine proteases.
pubmed doi rcsb
molecule keywords OVOMUCOID THIRD DOMAIN
total genus 10
structure length 56
sequence length 56
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 1982-01-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1ovoA00
3OVOA 1SGEI 2KMOA 4HGUA 1AN1I 1OVOA 2NU1I 1BUSA 2B0UC 1OMTA 1LR9A 2ARPF 1DS3I 1TBRR 1M8CA 1SGPI 1OYVI 2SGQI 3SGQI 1KMAA 1SGRI 1UVGA 1TURA 1N13A 2N52A 1YU6C 1IW4A 1SGYI 2NU3I 2JXDA 2GKRI 1UUCA 2OVOA 1YTPA 2KMQA 4SGBI 1PCEA 4GI3C 2BUSA 1Y1BA 3TJQA 2N17A 2P6AC 1BMOA 2XRCA 1MT1A 1CT0I 1TUSA 1Y1CA 2JYYA 3B4VC 1SGDI 1CGII 1H0ZA 1CGJI 2KMRA 2KCXA 2SGFI 1Z7KB 1LR8A 5JHWC 2F3CI 1HDLA 1M8BA 3SGBI 1DS2I 2WCYA 1CT4I 2NU2I 1HPTA 1PJUA 1IY6A 1SGNI 5DAEA 1CE3A 2LEOA 3HH2C 2SGPI 3QTLD 2M5XA 1SGQI 1CSOI 2QQDA 1FYBA 2SGDI 2JZMA 1R0RI 2QQCA 2V53A 1CHOI 2N71A 2GKTI 1HJAI 1TGSI 2GKVA 2SGEI 1TIHA 3SEKC 1LR7A 1TBQR 4OVOA 1IY5A 1NUBA 2NU4I 1PPFI 2ERWA 1CT2I 1UVFA 1OMUA 2NU0I 2KMPA
chains in the Genus database with same CATH superfamily
3UGIA 3OVOA 3D00A 3UFFA 2OZUA 2ROWA 3R5BA 1SGEI 2KMOA 4HGUA 2ENZA 1AN1I 1OVOA 2NU1I 1FAQA 1BUSA 2B0UC 1OMTA 1LR9A 1WGCA 2ARPF 2QQ0A 2ENNA 3TOAA 1KBFA 1DS3I 1TBRR 1M8CA 1SGPI 1OYVI 4UXIA 4UXJA 2CWFA 2PQ8A 1FARA 1WGTA 2RC4A 1NXUA 2SGQI 1WKXA 2OD1A 3SGQI 1KMAA 1UHAA 1W3SA 1R79A 1X74A 1SGRI 3OL0A 1UVGA 3BJIA 3QWPA 5CCLA 3UGDA 3UGLA 2V1CC 1TURA 1N13A 2E5RA 3VDUA 2UZ3A 2N52A 2VRWB 9WGAA 1YU6C 1IW4A 1SGYI 2X52A 1RFHA 3E59A 2NU3I 1MJBA 2JXDA 2GKRI 1UUCA 3UEYA 1YTPA 2OVOA 2JW6A 2KMQA 4SGBI 1PCEA 2WVJA 3PDNA 4GI3C 2BUSA 4AMLA 5JHWC 1Y1BA 2QPOA 2N17A 2P6AC 1BMOA 3R5AA 4L9MA 3TJQA 5E3PA 1Q9BA 4DNCA 1HEVA 2FNFX 5HI7A 3KY9A 2XRCA 2J87A 2ELIA 2LB7A 5J8FA 2CWGA 1FY7A 2ORVA 2B8TA 1MT1A 2Y0MA 5FUXA 2YQPA 1MJAA 3MEKA 2UVOA 1CT0I 1ULNA 2V1CA 2A20A 1TUSA 2QQEA 1Y1CA 4MPIA 1K7VA 4UXHA 2L8EA 5CCMA 3FSXA 2JYYA 1X4SA 2GIVA 3B4VC 2LUYA 5HQ8A 1SGDI 2CWHA 1CGII 5E3RA 2DKVA 4JCVE 1PTRA 1WTJA 1H0ZA 1CGJI 1V1IA 1XA6A 1Z2IA 2KMRA 4B6DA 2OU2A 2KCXA 3VE5A 2SGFI 2DB6A 1TOTA 4WP4A 3UEJA 5J8CA 1Z7KB 5FUYA 1LR8A 5FUVA 2N1AB 5EX0A 1TBOA 4A24A 2F3CI 1PTQA 2W0TA 2JA1A 3OXGA 1V1HA 1M8BA 1HDLA 3SGBI 1XX6A 1DS2I 2WCYA 3RU0A 2X3TA 1CT4I 2NU2I 3OXFA 2E73A 1P9ZA 2RIJA 1HPTA 3TO7A 1PJUA 1ULKA 2DIPA 1MJ9A 1IY6A 4E1PA 1ULMA 3UOEA 3CXLA 1K7UA 1SGNI 1XBTA 5DAEA 1U5KA 3FC3A 2LEOA 3HH2C 1CE3A 2SGPI 3QTLD 2M5XA 1SGQI 1CSOI 2QQDA 2J9RA 5EX3A 1FYBA 2SGDI 2JZMA 2ORWA 3OXLA 1VDDA 2K9HA 7WGAA 1R0RI 1S20A 3R5DA 2QQCA 1Y8FA 2V53A 1CHOI 2CJSC 3QAHA 2N71A 4FKDA 2GKTI 3TO6A 1HJAI 1TGSI 3FSYA 1KBEA 2GKVA 2SGEI 1TIHA 3VDPA 3GOXA 2YUUA 3R5CA 3SEKC 1LR7A 1TBQR 1W4RA 2WGCA 4OVOA 5FUWA 1IY5A 1NUBA 2NU4I 4E1RA 3TO9A 2L7XA 1PPFI 1K7TA 1P9GA 1TBNA 2ERWA 1CT2I 5E3QA 3TOBA 1UVFA 1OMUA 2NU0I 2GVIA 2ODDA 3E2IA 2KMPA
chains in the Genus database with same CATH topology
3UGIA 3OVOA 3D00A 3UFFA 2ROWA 1SGEI 2KMOA 4HGUA 2ENZA 1AN1I 1OVOA 2NU1I 1FAQA 1BUSA 2B0UC 1OMTA 1LR9A 2ARPF 2QQ0A 2ENNA 1KBFA 1DS3I 1TBRR 1M8CA 1SGPI 1OYVI 4UXIA 4UXJA 1FARA 2SGQI 3SGQI 2OD1A 1KMAA 1X74A 1W3SA 1R79A 1SGRI 3OL0A 1UVGA 3BJIA 3QWPA 5CCLA 3UGDA 3UGLA 2V1CC 1TURA 1N13A 2E5RA 3VDUA 2UZ3A 2N52A 2VRWB 1YU6C 1IW4A 1SGYI 3E59A 1RFHA 2NU3I 2JXDA 2GKRI 1UUCA 3UEYA 1YTPA 2OVOA 2JW6A 2KMQA 4SGBI 1PCEA 2WVJA 3PDNA 4GI3C 2BUSA 5JHWC 1Y1BA 2QPOA 2N17A 2P6AC 1BMOA 4L9MA 3TJQA 2FNFX 5HI7A 3KY9A 2XRCA 2J87A 2ELIA 2ORVA 2B8TA 1MT1A 5FUXA 2YQPA 3MEKA 1CT0I 2V1CA 2A20A 1TUSA 2QQEA 1Y1CA 4UXHA 2L8EA 5CCMA 2JYYA 1X4SA 3B4VC 2LUYA 5HQ8A 1SGDI 1CGII 4JCVE 1PTRA 1H0ZA 1CGJI 1V1IA 1XA6A 2KMRA 4B6DA 2KCXA 3VE5A 2SGFI 2DB6A 1TOTA 3UEJA 1Z7KB 5FUYA 1LR8A 5FUVA 2N1AB 5EX0A 1TBOA 4A24A 2F3CI 1PTQA 2W0TA 2JA1A 3OXGA 1V1HA 1M8BA 1HDLA 3SGBI 1XX6A 1DS2I 2WCYA 3RU0A 1CT4I 2NU2I 3OXFA 2E73A 1HPTA 1PJUA 2DIPA 1IY6A 4E1PA 3CXLA 1SGNI 1XBTA 5DAEA 1U5KA 3FC3A 2LEOA 3HH2C 1CE3A 2SGPI 3QTLD 2M5XA 1SGQI 1CSOI 2QQDA 2J9RA 5EX3A 1FYBA 2SGDI 2JZMA 2ORWA 3OXLA 1VDDA 2K9HA 1R0RI 2QQCA 1Y8FA 2V53A 1CHOI 2CJSC 2N71A 4FKDA 2GKTI 1HJAI 1TGSI 1KBEA 2GKVA 2SGEI 1TIHA 3VDPA 3GOXA 2YUUA 3SEKC 1LR7A 1TBQR 1W4RA 4OVOA 5FUWA 1IY5A 1NUBA 2NU4I 4E1RA 2L7XA 1PPFI 2ERWA 1TBNA 1CT2I 1UVFA 1OMUA 2NU0I 2GVIA 2ODDA 3E2IA 2KMPA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3OVO A;  1SGE I;  2KMO A;  4HGU A;  1AN1 I;  1OVO A;  2NU1 I;  1BUS A;  2B0U C;  1OMT A;  1LR9 A;  2ARP F;  1DS3 I;  1TBR R;  1M8C A;  1SGP I;  1OYV I;  2SGQ I;  3SGQ I;  1KMA A;  1SGR I;  1UVG A;  1TUR A;  1N13 A;  2N52 A;  1YU6 C;  1IW4 A;  1SGY I;  2NU3 I;  2JXD A;  2GKR I;  1UUC A;  2OVO A;  1YTP A;  2KMQ A;  4SGB I;  1PCE A;  4GI3 C;  2BUS A;  1Y1B A;  3TJQ A;  2N17 A;  2P6A C;  1BMO A;  2XRC A;  1MT1 A;  1CT0 I;  1TUS A;  1Y1C A;  2JYY A;  3B4V C;  1SGD I;  1CGI I;  1H0Z A;  1CGJ I;  2KMR A;  2KCX A;  2SGF I;  1Z7K B;  1LR8 A;  5JHW C;  2F3C I;  1HDL A;  1M8B A;  3SGB I;  1DS2 I;  2WCY A;  1CT4 I;  2NU2 I;  1HPT A;  1PJU A;  1IY6 A;  1SGN I;  5DAE A;  1CE3 A;  2LEO A;  3HH2 C;  2SGP I;  3QTL D;  2M5X A;  1SGQ I;  1CSO I;  2QQD A;  1FYB A;  2SGD I;  2JZM A;  1R0R I;  2QQC A;  2V53 A;  1CHO I;  2N71 A;  2GKT I;  1HJA I;  1TGS I;  2GKV A;  2SGE I;  1TIH A;  3SEK C;  1LR7 A;  1TBQ R;  4OVO A;  1IY5 A;  1NUB A;  2NU4 I;  1PPF I;  2ERW A;  1CT2 I;  1UVF A;  1OMU A;  2NU0 I;  2KMP A; 
#chains in the Genus database with same CATH topology
 3UGI A;  3OVO A;  3D00 A;  3UFF A;  2OZU A;  2ROW A;  3R5B A;  1SGE I;  2KMO A;  4HGU A;  2ENZ A;  1AN1 I;  1OVO A;  2NU1 I;  1FAQ A;  1BUS A;  2B0U C;  1OMT A;  1LR9 A;  1WGC A;  2ARP F;  2QQ0 A;  2ENN A;  3TOA A;  1KBF A;  1DS3 I;  1TBR R;  1M8C A;  1SGP I;  1OYV I;  4UXI A;  4UXJ A;  2CWF A;  2PQ8 A;  1FAR A;  1WGT A;  2RC4 A;  1NXU A;  2SGQ I;  1WKX A;  2OD1 A;  3SGQ I;  1KMA A;  1UHA A;  1W3S A;  1R79 A;  1X74 A;  1SGR I;  3OL0 A;  1UVG A;  3BJI A;  3QWP A;  5CCL A;  3UGD A;  3UGL A;  2V1C C;  1TUR A;  1N13 A;  2E5R A;  3VDU A;  2UZ3 A;  2N52 A;  2VRW B;  9WGA A;  1YU6 C;  1IW4 A;  1SGY I;  2X52 A;  1RFH A;  3E59 A;  2NU3 I;  1MJB A;  2JXD A;  2GKR I;  1UUC A;  3UEY A;  1YTP A;  2OVO A;  2JW6 A;  2KMQ A;  4SGB I;  1PCE A;  2WVJ A;  3PDN A;  4GI3 C;  2BUS A;  4AML A;  5JHW C;  1Y1B A;  2QPO A;  2N17 A;  2P6A C;  1BMO A;  3R5A A;  4L9M A;  3TJQ A;  5E3P A;  1Q9B A;  4DNC A;  1HEV A;  2FNF X;  5HI7 A;  3KY9 A;  2XRC A;  2J87 A;  2ELI A;  2LB7 A;  5J8F A;  2CWG A;  1FY7 A;  2ORV A;  2B8T A;  1MT1 A;  2Y0M A;  5FUX A;  2YQP A;  1MJA A;  3MEK A;  2UVO A;  1CT0 I;  1ULN A;  2V1C A;  2A20 A;  1TUS A;  2QQE A;  1Y1C A;  4MPI A;  1K7V A;  4UXH A;  2L8E A;  5CCM A;  3FSX A;  2JYY A;  1X4S A;  2GIV A;  3B4V C;  2LUY A;  5HQ8 A;  1SGD I;  2CWH A;  1CGI I;  5E3R A;  2DKV A;  4JCV E;  1PTR A;  1WTJ A;  1H0Z A;  1CGJ I;  1V1I A;  1XA6 A;  1Z2I A;  2KMR A;  4B6D A;  2OU2 A;  2KCX A;  3VE5 A;  2SGF I;  2DB6 A;  1TOT A;  4WP4 A;  3UEJ A;  5J8C A;  1Z7K B;  5FUY A;  1LR8 A;  5FUV A;  2N1A B;  5EX0 A;  1TBO A;  4A24 A;  2F3C I;  1PTQ A;  2W0T A;  2JA1 A;  3OXG A;  1V1H A;  1M8B A;  1HDL A;  3SGB I;  1XX6 A;  1DS2 I;  2WCY A;  3RU0 A;  2X3T A;  1CT4 I;  2NU2 I;  3OXF A;  2E73 A;  1P9Z A;  2RIJ A;  1HPT A;  3TO7 A;  1PJU A;  1ULK A;  2DIP A;  1MJ9 A;  1IY6 A;  4E1P A;  1ULM A;  3UOE A;  3CXL A;  1K7U A;  1SGN I;  1XBT A;  5DAE A;  1U5K A;  3FC3 A;  2LEO A;  3HH2 C;  1CE3 A;  2SGP I;  3QTL D;  2M5X A;  1SGQ I;  1CSO I;  2QQD A;  2J9R A;  5EX3 A;  1FYB A;  2SGD I;  2JZM A;  2ORW A;  3OXL A;  1VDD A;  2K9H A;  7WGA A;  1R0R I;  1S20 A;  3R5D A;  2QQC A;  1Y8F A;  2V53 A;  1CHO I;  2CJS C;  3QAH A;  2N71 A;  4FKD A;  2GKT I;  3TO6 A;  1HJA I;  1TGS I;  3FSY A;  1KBE A;  2GKV A;  2SGE I;  1TIH A;  3VDP A;  3GOX A;  2YUU A;  3R5C A;  3SEK C;  1LR7 A;  1TBQ R;  1W4R A;  2WGC A;  4OVO A;  5FUW A;  1IY5 A;  1NUB A;  2NU4 I;  4E1R A;  3TO9 A;  2L7X A;  1PPF I;  1K7T A;  1P9G A;  1TBN A;  2ERW A;  1CT2 I;  5E3Q A;  3TOB A;  1UVF A;  1OMU A;  2NU0 I;  2GVI A;  2ODD A;  3E2I A;  2KMP A; 
#chains in the Genus database with same CATH homology
 3UGI A;  3OVO A;  3D00 A;  3UFF A;  2ROW A;  1SGE I;  2KMO A;  4HGU A;  2ENZ A;  1AN1 I;  1OVO A;  2NU1 I;  1FAQ A;  1BUS A;  2B0U C;  1OMT A;  1LR9 A;  2ARP F;  2QQ0 A;  2ENN A;  1KBF A;  1DS3 I;  1TBR R;  1M8C A;  1SGP I;  1OYV I;  4UXI A;  4UXJ A;  1FAR A;  2SGQ I;  3SGQ I;  2OD1 A;  1KMA A;  1X74 A;  1W3S A;  1R79 A;  1SGR I;  3OL0 A;  1UVG A;  3BJI A;  3QWP A;  5CCL A;  3UGD A;  3UGL A;  2V1C C;  1TUR A;  1N13 A;  2E5R A;  3VDU A;  2UZ3 A;  2N52 A;  2VRW B;  1YU6 C;  1IW4 A;  1SGY I;  3E59 A;  1RFH A;  2NU3 I;  2JXD A;  2GKR I;  1UUC A;  3UEY A;  1YTP A;  2OVO A;  2JW6 A;  2KMQ A;  4SGB I;  1PCE A;  2WVJ A;  3PDN A;  4GI3 C;  2BUS A;  5JHW C;  1Y1B A;  2QPO A;  2N17 A;  2P6A C;  1BMO A;  4L9M A;  3TJQ A;  2FNF X;  5HI7 A;  3KY9 A;  2XRC A;  2J87 A;  2ELI A;  2ORV A;  2B8T A;  1MT1 A;  5FUX A;  2YQP A;  3MEK A;  1CT0 I;  2V1C A;  2A20 A;  1TUS A;  2QQE A;  1Y1C A;  4UXH A;  2L8E A;  5CCM A;  2JYY A;  1X4S A;  3B4V C;  2LUY A;  5HQ8 A;  1SGD I;  1CGI I;  4JCV E;  1PTR A;  1H0Z A;  1CGJ I;  1V1I A;  1XA6 A;  2KMR A;  4B6D A;  2KCX A;  3VE5 A;  2SGF I;  2DB6 A;  1TOT A;  3UEJ A;  1Z7K B;  5FUY A;  1LR8 A;  5FUV A;  2N1A B;  5EX0 A;  1TBO A;  4A24 A;  2F3C I;  1PTQ A;  2W0T A;  2JA1 A;  3OXG A;  1V1H A;  1M8B A;  1HDL A;  3SGB I;  1XX6 A;  1DS2 I;  2WCY A;  3RU0 A;  1CT4 I;  2NU2 I;  3OXF A;  2E73 A;  1HPT A;  1PJU A;  2DIP A;  1IY6 A;  4E1P A;  3CXL A;  1SGN I;  1XBT A;  5DAE A;  1U5K A;  3FC3 A;  2LEO A;  3HH2 C;  1CE3 A;  2SGP I;  3QTL D;  2M5X A;  1SGQ I;  1CSO I;  2QQD A;  2J9R A;  5EX3 A;  1FYB A;  2SGD I;  2JZM A;  2ORW A;  3OXL A;  1VDD A;  2K9H A;  1R0R I;  2QQC A;  1Y8F A;  2V53 A;  1CHO I;  2CJS C;  2N71 A;  4FKD A;  2GKT I;  1HJA I;  1TGS I;  1KBE A;  2GKV A;  2SGE I;  1TIH A;  3VDP A;  3GOX A;  2YUU A;  3SEK C;  1LR7 A;  1TBQ R;  1W4R A;  4OVO A;  5FUW A;  1IY5 A;  1NUB A;  2NU4 I;  4E1R A;  2L7X A;  1PPF I;  2ERW A;  1TBN A;  1CT2 I;  1UVF A;  1OMU A;  2NU0 I;  2GVI A;  2ODD A;  3E2I A;  2KMP A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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