1PTRA

Protein kinase c delta cys2 domain complexed with phorbol-13-acetate
Total Genus 9

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
9
sequence length
50
structure length
50
Chain Sequence
HRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLC

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Phosphotransferase
source organism Mus musculus
publication title Crystal structure of the cys2 activator-binding domain of protein kinase C delta in complex with phorbol ester.
pubmed doi rcsb
molecule keywords PROTEIN KINASE C DELTA TYPE
total genus 9
structure length 50
sequence length 50
ec nomenclature ec 2.7.10.2: Non-specific protein-tyrosine kinase.
pdb deposition date 1995-05-11
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.20 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1ptrA00
2VRWB 2JA1A 2YUUA 3UEJA 3UGLA 1Y8FA 1XA6A 2GVIA 2QPOA 2ENNA 2ROWA 1W4RA 4UXHA 3CXLA 3E2IA 1FAQA 2ENZA 2J87A 2WVJA 3KY9A 1FARA 4FKDA 3UFFA 2QQEA 4UXIA 2J9RA 2ORVA 4B6DA 1TBOA 1XBTA 2B8TA 2FNFX 1KBEA 1KBFA 1PTRA 1PTQA 4UXJA 5FUYA 3BJIA 2QQ0A 3UEYA 2ELIA 1R79A 2UZ3A 3UGIA 5FUVA 2E73A 4L9MA 1XX6A 1RFHA 2ORWA 5FUWA 1TBNA 5FUXA 2DB6A 3UGDA
chains in the Genus database with same CATH superfamily
1CT2I 2VRWB 2YUUA 3QAHA 3UEJA 1N13A 2GVIA 3TO9A 1CE3A 1W4RA 2SGEI 1Y1CA 2UVOA 1IY6A 4AMLA 2ENZA 2NU4I 2WVJA 2NU3I 1NUBA 1TBRR 2OVOA 1DS3I 3E59A 1X74A 1UVGA 1ULKA 5E3PA 3OXLA 2L8EA 2L7XA 4HGUA 1M8BA 2W0TA 3VE5A 5DAEA 4UXJA 3FSYA 2F3CI 2QQ0A 3SEKC 1WKXA 2LB7A 2DIPA 2X52A 4WP4A 3UEYA 2UZ3A 1PPFI 2JZMA 3R5DA 1MJBA 2NU1I 1CT0I 1OMTA 2CJSC 2V1CA 5HI7A 2SGFI 2GKTI 2DB6A 2SGDI 1HJAI 2V1CC 1TBQR 2KMRA 1S20A 2GIVA 4OVOA 2JA1A 1Y1BA 3UGLA 1PJUA 2KMOA 1XA6A 2B0UC 2GKRI 2ENNA 2NU2I 2KMPA 4UXHA 3FSXA 1R0RI 1V1HA 2J87A 5CCLA 2QQDA 1Z2IA 3R5CA 4FKDA 3UFFA 2SGQI 1FYBA 3OVOA 1H0ZA 1XBTA 2FNFX 2PQ8A 3SGQI 1Z7KB 1UVFA 1SGPI 1YTPA 2A20A 5HQ8A 1AN1I 1LR9A 2JYYA 4MPIA 1PTQA 1SGQI 5FUYA 2RIJA 2ELIA 1OMUA 2N52A 2X3TA 1K7UA 1MJAA 4A24A 2BUSA 1U5KA 4SGBI 2CWGA 1RFHA 3OXGA 1TBNA 1UHAA 1CHOI 1X4SA 2LEOA 1CGJI 2N71A 2OU2A 3OXFA 3R5BA 3TJQA 1SGEI 2OD1A 1BUSA 1HDLA 1Y8FA 1CT4I 2CWFA 2OZUA 3E2IA 3VDPA 4E1PA 5CCMA 2K9HA 1Q9BA 1NXUA 1FARA 3RU0A 1W3SA 1YU6C 3TO6A 2KCXA 2QQEA 4B6DA 2ORVA 5EX3A 2B8TA 2DKVA 3OL0A 3TOAA 2YQPA 1TGSI 2ERWA 1ULMA 1KBEA 3FC3A 1TUSA 2RC4A 1KBFA 1OVOA 2WCYA 1DS2I 1PTRA 1CGII 1UUCA 3QTLD 1FY7A 2JW6A 2ARPF 7WGAA 1KMAA 5E3QA 1SGDI 2E73A 4L9MA 2N1AB 4DNCA 1HPTA 1K7VA 3MEKA 5FUXA 3HH2C 1P9ZA 1OYVI 1LR8A 2QQCA 3UGDA 1IY5A 2V53A 2N17A 1TOTA 1K7TA 2SGPI 2QPOA 1FAQA 2ROWA 1CSOI 2CWHA 3CXLA 5E3RA 1MT1A 3KY9A 1P9GA 1MJ9A 3TOBA 4JCVE 1TURA 1LR7A 3GOXA 4GI3C 1HEVA 2Y0MA 3R5AA 4UXIA 2J9RA 2JXDA 1SGYI 3SGBI 1TBOA 1SGRI 1WGCA 1WTJA 3QWPA 4E1RA 1WGTA 2LUYA 3UOEA 1IW4A 2GKVA 1PCEA 3BJIA 5J8FA 2P6AC 2ODDA 2KMQA 1ULNA 2E5RA 1R79A 3VDUA 3UGIA 2XRCA 3B4VC 5EX0A 1V1IA 5FUVA 2WGCA 3D00A 1XX6A 3PDNA 2M5XA 2ORWA 5JHWC 9WGAA 1VDDA 5FUWA 1TIHA 1M8CA 5J8CA 1BMOA 1SGNI 2NU0I 3TO7A
chains in the Genus database with same CATH topology
1CT2I 2VRWB 2YUUA 3UEJA 1N13A 2GVIA 1CE3A 1W4RA 2SGEI 1Y1CA 1IY6A 2ENZA 2NU4I 2WVJA 2NU3I 1NUBA 1TBRR 2OVOA 1DS3I 3E59A 1X74A 1UVGA 3OXLA 2L8EA 2L7XA 4HGUA 1M8BA 2W0TA 3VE5A 5DAEA 4UXJA 2F3CI 2QQ0A 3SEKC 3UEYA 2DIPA 2UZ3A 1PPFI 2JZMA 2NU1I 1CT0I 1OMTA 2CJSC 2V1CA 5HI7A 2SGFI 2GKTI 2DB6A 2SGDI 1HJAI 2V1CC 1TBQR 2KMRA 4OVOA 2JA1A 1Y1BA 3UGLA 1PJUA 2KMOA 1XA6A 2B0UC 2GKRI 2ENNA 2NU2I 2KMPA 4UXHA 5CCLA 1R0RI 1V1HA 2J87A 2QQDA 4FKDA 3UFFA 1FYBA 2SGQI 3OVOA 1H0ZA 1XBTA 2FNFX 3SGQI 1Z7KB 1UVFA 1SGPI 1YTPA 2A20A 5HQ8A 1AN1I 1LR9A 2JYYA 1PTQA 1SGQI 5FUYA 2ELIA 1OMUA 2N52A 4A24A 2BUSA 1U5KA 4SGBI 1RFHA 3OXGA 1TBNA 1CHOI 1X4SA 2LEOA 2N71A 1CGJI 3OXFA 3TJQA 1BUSA 1KBFA 1SGEI 2OD1A 1HDLA 1Y8FA 1CT4I 3E2IA 3VDPA 4E1PA 5CCMA 2K9HA 1FARA 3RU0A 1W3SA 1YU6C 2KCXA 2QQEA 4B6DA 2ORVA 5EX3A 2B8TA 3OL0A 2YQPA 1TGSI 2ERWA 1KBEA 3FC3A 1TUSA 1OVOA 2WCYA 1DS2I 1PTRA 1CGII 1UUCA 3QTLD 2JW6A 2ARPF 1KMAA 1SGDI 2E73A 4L9MA 2N1AB 1HPTA 3MEKA 5FUXA 3HH2C 1OYVI 1LR8A 2QQCA 3UGDA 1IY5A 2V53A 2N17A 1TOTA 2SGPI 2QPOA 1FAQA 2ROWA 1CSOI 3CXLA 1MT1A 3KY9A 4JCVE 1TURA 1LR7A 3GOXA 4GI3C 4UXIA 2J9RA 2JXDA 1SGYI 3SGBI 1TBOA 1SGRI 3QWPA 4E1RA 2LUYA 1IW4A 2GKVA 1PCEA 3BJIA 2P6AC 2ODDA 2KMQA 2E5RA 1R79A 3VDUA 3UGIA 2XRCA 3B4VC 5EX0A 1V1IA 5FUVA 3D00A 3PDNA 1XX6A 5JHWC 2M5XA 2ORWA 1VDDA 5FUWA 1TIHA 1M8CA 1BMOA 1SGNI 2NU0I
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2VRW B;  2JA1 A;  2YUU A;  3UEJ A;  3UGL A;  1Y8F A;  1XA6 A;  2GVI A;  2QPO A;  2ENN A;  2ROW A;  1W4R A;  4UXH A;  3CXL A;  3E2I A;  1FAQ A;  2ENZ A;  2J87 A;  2WVJ A;  3KY9 A;  1FAR A;  4FKD A;  3UFF A;  2QQE A;  4UXI A;  2J9R A;  2ORV A;  4B6D A;  1TBO A;  1XBT A;  2B8T A;  2FNF X;  1KBE A;  1KBF A;  1PTR A;  1PTQ A;  4UXJ A;  5FUY A;  3BJI A;  2QQ0 A;  3UEY A;  2ELI A;  1R79 A;  2UZ3 A;  3UGI A;  5FUV A;  2E73 A;  4L9M A;  1XX6 A;  1RFH A;  2ORW A;  5FUW A;  1TBN A;  5FUX A;  2DB6 A;  3UGD A; 
#chains in the Genus database with same CATH topology
 1CT2 I;  2VRW B;  2YUU A;  3QAH A;  3UEJ A;  1N13 A;  2GVI A;  3TO9 A;  1CE3 A;  1W4R A;  2SGE I;  1Y1C A;  2UVO A;  1IY6 A;  4AML A;  2ENZ A;  2NU4 I;  2WVJ A;  2NU3 I;  1NUB A;  1TBR R;  2OVO A;  1DS3 I;  3E59 A;  1X74 A;  1UVG A;  1ULK A;  5E3P A;  3OXL A;  2L8E A;  2L7X A;  4HGU A;  1M8B A;  2W0T A;  3VE5 A;  5DAE A;  4UXJ A;  3FSY A;  2F3C I;  2QQ0 A;  3SEK C;  1WKX A;  2LB7 A;  2DIP A;  2X52 A;  4WP4 A;  3UEY A;  2UZ3 A;  1PPF I;  2JZM A;  3R5D A;  1MJB A;  2NU1 I;  1CT0 I;  1OMT A;  2CJS C;  2V1C A;  5HI7 A;  2SGF I;  2GKT I;  2DB6 A;  2SGD I;  1HJA I;  2V1C C;  1TBQ R;  2KMR A;  1S20 A;  2GIV A;  4OVO A;  2JA1 A;  1Y1B A;  3UGL A;  1PJU A;  2KMO A;  1XA6 A;  2B0U C;  2GKR I;  2ENN A;  2NU2 I;  2KMP A;  4UXH A;  3FSX A;  1R0R I;  1V1H A;  2J87 A;  5CCL A;  2QQD A;  1Z2I A;  3R5C A;  4FKD A;  3UFF A;  2SGQ I;  1FYB A;  3OVO A;  1H0Z A;  1XBT A;  2FNF X;  2PQ8 A;  3SGQ I;  1Z7K B;  1UVF A;  1SGP I;  1YTP A;  2A20 A;  5HQ8 A;  1AN1 I;  1LR9 A;  2JYY A;  4MPI A;  1PTQ A;  1SGQ I;  5FUY A;  2RIJ A;  2ELI A;  1OMU A;  2N52 A;  2X3T A;  1K7U A;  1MJA A;  4A24 A;  2BUS A;  1U5K A;  4SGB I;  2CWG A;  1RFH A;  3OXG A;  1TBN A;  1UHA A;  1CHO I;  1X4S A;  2LEO A;  1CGJ I;  2N71 A;  2OU2 A;  3OXF A;  3R5B A;  3TJQ A;  1SGE I;  2OD1 A;  1BUS A;  1HDL A;  1Y8F A;  1CT4 I;  2CWF A;  2OZU A;  3E2I A;  3VDP A;  4E1P A;  5CCM A;  2K9H A;  1Q9B A;  1NXU A;  1FAR A;  3RU0 A;  1W3S A;  1YU6 C;  3TO6 A;  2KCX A;  2QQE A;  4B6D A;  2ORV A;  5EX3 A;  2B8T A;  2DKV A;  3OL0 A;  3TOA A;  2YQP A;  1TGS I;  2ERW A;  1ULM A;  1KBE A;  3FC3 A;  1TUS A;  2RC4 A;  1KBF A;  1OVO A;  2WCY A;  1DS2 I;  1PTR A;  1CGI I;  1UUC A;  3QTL D;  1FY7 A;  2JW6 A;  2ARP F;  7WGA A;  1KMA A;  5E3Q A;  1SGD I;  2E73 A;  4L9M A;  2N1A B;  4DNC A;  1HPT A;  1K7V A;  3MEK A;  5FUX A;  3HH2 C;  1P9Z A;  1OYV I;  1LR8 A;  2QQC A;  3UGD A;  1IY5 A;  2V53 A;  2N17 A;  1TOT A;  1K7T A;  2SGP I;  2QPO A;  1FAQ A;  2ROW A;  1CSO I;  2CWH A;  3CXL A;  5E3R A;  1MT1 A;  3KY9 A;  1P9G A;  1MJ9 A;  3TOB A;  4JCV E;  1TUR A;  1LR7 A;  3GOX A;  4GI3 C;  1HEV A;  2Y0M A;  3R5A A;  4UXI A;  2J9R A;  2JXD A;  1SGY I;  3SGB I;  1TBO A;  1SGR I;  1WGC A;  1WTJ A;  3QWP A;  4E1R A;  1WGT A;  2LUY A;  3UOE A;  1IW4 A;  2GKV A;  1PCE A;  3BJI A;  5J8F A;  2P6A C;  2ODD A;  2KMQ A;  1ULN A;  2E5R A;  1R79 A;  3VDU A;  3UGI A;  2XRC A;  3B4V C;  5EX0 A;  1V1I A;  5FUV A;  2WGC A;  3D00 A;  1XX6 A;  3PDN A;  2M5X A;  2ORW A;  5JHW C;  9WGA A;  1VDD A;  5FUW A;  1TIH A;  1M8C A;  5J8C A;  1BMO A;  1SGN I;  2NU0 I;  3TO7 A; 
#chains in the Genus database with same CATH homology
 1CT2 I;  2VRW B;  2YUU A;  3UEJ A;  1N13 A;  2GVI A;  1CE3 A;  1W4R A;  2SGE I;  1Y1C A;  1IY6 A;  2ENZ A;  2NU4 I;  2WVJ A;  2NU3 I;  1NUB A;  1TBR R;  2OVO A;  1DS3 I;  3E59 A;  1X74 A;  1UVG A;  3OXL A;  2L8E A;  2L7X A;  4HGU A;  1M8B A;  2W0T A;  3VE5 A;  5DAE A;  4UXJ A;  2F3C I;  2QQ0 A;  3SEK C;  3UEY A;  2DIP A;  2UZ3 A;  1PPF I;  2JZM A;  2NU1 I;  1CT0 I;  1OMT A;  2CJS C;  2V1C A;  5HI7 A;  2SGF I;  2GKT I;  2DB6 A;  2SGD I;  1HJA I;  2V1C C;  1TBQ R;  2KMR A;  4OVO A;  2JA1 A;  1Y1B A;  3UGL A;  1PJU A;  2KMO A;  1XA6 A;  2B0U C;  2GKR I;  2ENN A;  2NU2 I;  2KMP A;  4UXH A;  5CCL A;  1R0R I;  1V1H A;  2J87 A;  2QQD A;  4FKD A;  3UFF A;  1FYB A;  2SGQ I;  3OVO A;  1H0Z A;  1XBT A;  2FNF X;  3SGQ I;  1Z7K B;  1UVF A;  1SGP I;  1YTP A;  2A20 A;  5HQ8 A;  1AN1 I;  1LR9 A;  2JYY A;  1PTQ A;  1SGQ I;  5FUY A;  2ELI A;  1OMU A;  2N52 A;  4A24 A;  2BUS A;  1U5K A;  4SGB I;  1RFH A;  3OXG A;  1TBN A;  1CHO I;  1X4S A;  2LEO A;  2N71 A;  1CGJ I;  3OXF A;  3TJQ A;  1BUS A;  1KBF A;  1SGE I;  2OD1 A;  1HDL A;  1Y8F A;  1CT4 I;  3E2I A;  3VDP A;  4E1P A;  5CCM A;  2K9H A;  1FAR A;  3RU0 A;  1W3S A;  1YU6 C;  2KCX A;  2QQE A;  4B6D A;  2ORV A;  5EX3 A;  2B8T A;  3OL0 A;  2YQP A;  1TGS I;  2ERW A;  1KBE A;  3FC3 A;  1TUS A;  1OVO A;  2WCY A;  1DS2 I;  1PTR A;  1CGI I;  1UUC A;  3QTL D;  2JW6 A;  2ARP F;  1KMA A;  1SGD I;  2E73 A;  4L9M A;  2N1A B;  1HPT A;  3MEK A;  5FUX A;  3HH2 C;  1OYV I;  1LR8 A;  2QQC A;  3UGD A;  1IY5 A;  2V53 A;  2N17 A;  1TOT A;  2SGP I;  2QPO A;  1FAQ A;  2ROW A;  1CSO I;  3CXL A;  1MT1 A;  3KY9 A;  4JCV E;  1TUR A;  1LR7 A;  3GOX A;  4GI3 C;  4UXI A;  2J9R A;  2JXD A;  1SGY I;  3SGB I;  1TBO A;  1SGR I;  3QWP A;  4E1R A;  2LUY A;  1IW4 A;  2GKV A;  1PCE A;  3BJI A;  2P6A C;  2ODD A;  2KMQ A;  2E5R A;  1R79 A;  3VDU A;  3UGI A;  2XRC A;  3B4V C;  5EX0 A;  1V1I A;  5FUV A;  3D00 A;  3PDN A;  1XX6 A;  5JHW C;  2M5X A;  2ORW A;  1VDD A;  5FUW A;  1TIH A;  1M8C A;  1BMO A;  1SGN I;  2NU0 I; 
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similar chains in the pdb database (?% sequence similarity)

 
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