1PTRA

Protein kinase c delta cys2 domain complexed with phorbol-13-acetate
Total Genus 9
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
9
sequence length
50
structure length
50
Chain Sequence
HRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLC
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Crystal structure of the cys2 activator-binding domain of protein kinase C delta in complex with phorbol ester.
pubmed doi rcsb
molecule tags Phosphotransferase
source organism Mus musculus
molecule keywords PROTEIN KINASE C DELTA TYPE
total genus 9
structure length 50
sequence length 50
ec nomenclature ec 2.7.10.2: Non-specific protein-tyrosine kinase.
pdb deposition date 1995-05-11
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.20 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1ptrA00
4UXIA 5FUWA 3UEJA 1FAQA 1XA6A 3E2IA 4UXJA 1Y8FA 3UGDA 4FKDA 1FARA 4B6DA 3UGLA 3UGIA 1W4RA 1XX6A 1XBTA 1R79A 1TBNA 3BJIA 2QQ0A 2J87A 5FUYA 3KY9A 2YUUA 2E73A 2DB6A 3CXLA 2UZ3A 2ORWA 3UEYA 2GVIA 1KBEA 1RFHA 5FUXA 2ENZA 2ENNA 3UFFA 5FUVA 2JA1A 2ELIA 2ROWA 2QQEA 4UXHA 1PTQA 1TBOA 2QPOA 1KBFA 2ORVA 2J9RA 1PTRA 2WVJA 4L9MA 2VRWB 2B8TA 2FNFX
chains in the Genus database with same CATH superfamily
1LR8A 2NU0I 2QQDA 1XA6A 3FSYA 2CWFA 2Y0MA 1HPTA 5HI7A 1CT0I 1MJAA 2L8EA 1FARA 3MEKA 2P6AC 4B6DA 1SGNI 1N13A 2XRCA 3VE5A 1V1HA 5J8FA 3GOXA 1UVGA 1BMOA 2F3CI 4E1PA 1TOTA 1XBTA 3RU0A 1ULMA 1HJAI 1WTJA 1UHAA 1OMTA 5E3QA 1SGDI 2E73A 2NU2I 2N1AB 1LR9A 2PQ8A 3CXLA 3UEYA 1UUCA 1KBEA 4A24A 5FUXA 2OD1A 4E1RA 2JA1A 5EX0A 1PTQA 3VDUA 1ULNA 2WVJA 3TO6A 1MJBA 2SGEI 1K7UA 2B8TA 1PPFI 3UEJA 1TBRR 1DS3I 2RC4A 1Z2IA 2KMRA 1TGSI 2B0UC 2N52A 3R5BA 1X74A 3UGDA 1SGRI 2W0TA 2ARPF 3OXGA 2KMPA 3R5AA 3UGLA 3UGIA 2X52A 2CJSC 2NU4I 1CE3A 2SGFI 1CT4I 2LUYA 2M5XA 1FYBA 1KMAA 2QQ0A 2OU2A 2GKVA 1HEVA 3KY9A 2N17A 2DB6A 1AN1I 2ORWA 3HH2C 2GVIA 3OXLA 5J8CA 1BUSA 1IY6A 2ENNA 2UVOA 1TIHA 2ODDA 2ROWA 3SEKC 1CGJI 4UXHA 4WP4A 4AMLA 2V1CA 3TO7A 3FSXA 1TBOA 3TOBA 5HQ8A 2JXDA 2ORVA 1IW4A 5DAEA 3VDPA 1PTRA 4OVOA 2FNFX 4UXIA 2GKTI 4UXJA 1ULKA 1OVOA 1X4SA 5CCLA 1Y8FA 3OL0A 5E3RA 1WKXA 1M8BA 1YU6C 2GKRI 4FKDA 2KCXA 3E59A 2SGPI 2CWHA 1VDDA 1PJUA 1S20A 1NXUA 4GI3C 3TJQA 5CCMA 7WGAA 1Q9BA 1WGCA 2SGQI 2JZMA 2RIJA 2WCYA 1TBNA 3BJIA 2LB7A 2WGCA 1Z7KB 2OVOA 2J87A 2OZUA 2V1CC 5JHWC 5FUYA 1CHOI 2YUUA 2NU1I 5EX3A 2UZ3A 1UVFA 9WGAA 1PCEA 1RFHA 1CSOI 1OMUA 3TO9A 3OXFA 1K7TA 2NU3I 3UFFA 2QQCA 1P9GA 2A20A 1SGQI 2DKVA 2ELIA 1NUBA 2QQEA 3QTLD 5FUVA 2QPOA 4JCVE 4DNCA 1Y1BA 1DS2I 2J9RA 1V1IA 4L9MA 1SGYI 3B4VC 2VRWB 2X3TA 1FY7A 2BUSA 1MT1A 4MPIA 3R5DA 2CWGA 5FUWA 1K7VA 2K9HA 3E2IA 3SGBI 1FAQA 1WGTA 4HGUA 2LEOA 3PDNA 3QWPA 2N71A 5E3PA 3FC3A 1W3SA 1Y1CA 2GIVA 1TUSA 3TOAA 1LR7A 1SGEI 4SGBI 1HDLA 3UOEA 1TURA 1U5KA 1W4RA 1XX6A 2DIPA 2KMOA 1R79A 3D00A 2JYYA 1R0RI 1SGPI 2JW6A 3QAHA 1H0ZA 1M8CA 1YTPA 1MJ9A 1CGII 1IY5A 2KMQA 1OYVI 2ENZA 1CT2I 1P9ZA 2YQPA 3OVOA 3SGQI 2E5RA 2L7XA 2ERWA 2V53A 3R5CA 2SGDI 1TBQR 1KBFA
chains in the Genus database with same CATH topology
1LR8A 2NU0I 2QQDA 1XA6A 1HPTA 5HI7A 1CT0I 2L8EA 1FARA 3MEKA 2P6AC 4B6DA 1SGNI 1N13A 2XRCA 3VE5A 1V1HA 3GOXA 1UVGA 1BMOA 2F3CI 4E1PA 1TOTA 1XBTA 3RU0A 1HJAI 1OMTA 1SGDI 2E73A 2NU2I 2N1AB 1LR9A 3CXLA 3UEYA 1UUCA 1KBEA 4A24A 5FUXA 2OD1A 4E1RA 2JA1A 5EX0A 1PTQA 3VDUA 2WVJA 2SGEI 2B8TA 1PPFI 3UEJA 1TBRR 1DS3I 2KMRA 2N52A 1TGSI 2B0UC 1X74A 3UGDA 1SGRI 2W0TA 2ARPF 3OXGA 2KMPA 3UGLA 3UGIA 2CJSC 2NU4I 1CE3A 2SGFI 1CT4I 2LUYA 2M5XA 1FYBA 1KMAA 2QQ0A 2GKVA 3KY9A 2N17A 2DB6A 1AN1I 2ORWA 3HH2C 2GVIA 3OXLA 1BUSA 1IY6A 2ENNA 1TIHA 2ODDA 2ROWA 3SEKC 1CGJI 4UXHA 5HQ8A 2V1CA 1TBOA 1IW4A 2JXDA 2ORVA 5DAEA 3VDPA 1PTRA 4OVOA 2FNFX 4UXIA 2GKTI 4UXJA 5CCLA 1OVOA 1X4SA 1Y8FA 3OL0A 1M8BA 1YU6C 2GKRI 4FKDA 2KCXA 3E59A 2SGPI 1VDDA 1PJUA 3TJQA 4GI3C 5CCMA 2WCYA 2SGQI 2JZMA 1TBNA 3BJIA 1Z7KB 2OVOA 2J87A 5JHWC 2V1CC 5FUYA 1CHOI 2YUUA 2NU1I 5EX3A 2UZ3A 1UVFA 1PCEA 1RFHA 1CSOI 1OMUA 3OXFA 2NU3I 3UFFA 2QQCA 2A20A 2ELIA 1SGQI 3QTLD 2QQEA 1NUBA 5FUVA 2QPOA 4JCVE 1Y1BA 1DS2I 2J9RA 1V1IA 4L9MA 1SGYI 3B4VC 2VRWB 2BUSA 1MT1A 5FUWA 1FAQA 2K9HA 3E2IA 3SGBI 4HGUA 2LEOA 3PDNA 3QWPA 2N71A 3FC3A 1W3SA 1Y1CA 1TUSA 1LR7A 1SGEI 4SGBI 1HDLA 1TURA 1U5KA 1W4RA 1XX6A 2DIPA 2KMOA 1R79A 3D00A 2JYYA 1R0RI 1SGPI 2JW6A 1H0ZA 1M8CA 1YTPA 1IY5A 1CGII 2KMQA 1OYVI 2ENZA 1CT2I 2YQPA 3OVOA 3SGQI 2E5RA 2L7XA 2ERWA 2V53A 2SGDI 1TBQR 1KBFA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4UXI A;  5FUW A;  3UEJ A;  1FAQ A;  1XA6 A;  3E2I A;  4UXJ A;  1Y8F A;  3UGD A;  4FKD A;  1FAR A;  4B6D A;  3UGL A;  3UGI A;  1W4R A;  1XX6 A;  1XBT A;  1R79 A;  1TBN A;  3BJI A;  2QQ0 A;  2J87 A;  5FUY A;  3KY9 A;  2YUU A;  2E73 A;  2DB6 A;  3CXL A;  2UZ3 A;  2ORW A;  3UEY A;  2GVI A;  1KBE A;  1RFH A;  5FUX A;  2ENZ A;  2ENN A;  3UFF A;  5FUV A;  2JA1 A;  2ELI A;  2ROW A;  2QQE A;  4UXH A;  1PTQ A;  1TBO A;  2QPO A;  1KBF A;  2ORV A;  2J9R A;  1PTR A;  2WVJ A;  4L9M A;  2VRW B;  2B8T A;  2FNF X; 
#chains in the Genus database with same CATH topology
 1LR8 A;  2NU0 I;  2QQD A;  1XA6 A;  3FSY A;  2CWF A;  2Y0M A;  1HPT A;  5HI7 A;  1CT0 I;  1MJA A;  2L8E A;  1FAR A;  3MEK A;  2P6A C;  4B6D A;  1SGN I;  1N13 A;  2XRC A;  3VE5 A;  1V1H A;  5J8F A;  3GOX A;  1UVG A;  1BMO A;  2F3C I;  4E1P A;  1TOT A;  1XBT A;  3RU0 A;  1ULM A;  1HJA I;  1WTJ A;  1UHA A;  1OMT A;  5E3Q A;  1SGD I;  2E73 A;  2NU2 I;  2N1A B;  1LR9 A;  2PQ8 A;  3CXL A;  3UEY A;  1UUC A;  1KBE A;  4A24 A;  5FUX A;  2OD1 A;  4E1R A;  2JA1 A;  5EX0 A;  1PTQ A;  3VDU A;  1ULN A;  2WVJ A;  3TO6 A;  1MJB A;  2SGE I;  1K7U A;  2B8T A;  1PPF I;  3UEJ A;  1TBR R;  1DS3 I;  2RC4 A;  1Z2I A;  2KMR A;  1TGS I;  2B0U C;  2N52 A;  3R5B A;  1X74 A;  3UGD A;  1SGR I;  2W0T A;  2ARP F;  3OXG A;  2KMP A;  3R5A A;  3UGL A;  3UGI A;  2X52 A;  2CJS C;  2NU4 I;  1CE3 A;  2SGF I;  1CT4 I;  2LUY A;  2M5X A;  1FYB A;  1KMA A;  2QQ0 A;  2OU2 A;  2GKV A;  1HEV A;  3KY9 A;  2N17 A;  2DB6 A;  1AN1 I;  2ORW A;  3HH2 C;  2GVI A;  3OXL A;  5J8C A;  1BUS A;  1IY6 A;  2ENN A;  2UVO A;  1TIH A;  2ODD A;  2ROW A;  3SEK C;  1CGJ I;  4UXH A;  4WP4 A;  4AML A;  2V1C A;  3TO7 A;  3FSX A;  1TBO A;  3TOB A;  5HQ8 A;  2JXD A;  2ORV A;  1IW4 A;  5DAE A;  3VDP A;  1PTR A;  4OVO A;  2FNF X;  4UXI A;  2GKT I;  4UXJ A;  1ULK A;  1OVO A;  1X4S A;  5CCL A;  1Y8F A;  3OL0 A;  5E3R A;  1WKX A;  1M8B A;  1YU6 C;  2GKR I;  4FKD A;  2KCX A;  3E59 A;  2SGP I;  2CWH A;  1VDD A;  1PJU A;  1S20 A;  1NXU A;  4GI3 C;  3TJQ A;  5CCM A;  7WGA A;  1Q9B A;  1WGC A;  2SGQ I;  2JZM A;  2RIJ A;  2WCY A;  1TBN A;  3BJI A;  2LB7 A;  2WGC A;  1Z7K B;  2OVO A;  2J87 A;  2OZU A;  2V1C C;  5JHW C;  5FUY A;  1CHO I;  2YUU A;  2NU1 I;  5EX3 A;  2UZ3 A;  1UVF A;  9WGA A;  1PCE A;  1RFH A;  1CSO I;  1OMU A;  3TO9 A;  3OXF A;  1K7T A;  2NU3 I;  3UFF A;  2QQC A;  1P9G A;  2A20 A;  1SGQ I;  2DKV A;  2ELI A;  1NUB A;  2QQE A;  3QTL D;  5FUV A;  2QPO A;  4JCV E;  4DNC A;  1Y1B A;  1DS2 I;  2J9R A;  1V1I A;  4L9M A;  1SGY I;  3B4V C;  2VRW B;  2X3T A;  1FY7 A;  2BUS A;  1MT1 A;  4MPI A;  3R5D A;  2CWG A;  5FUW A;  1K7V A;  2K9H A;  3E2I A;  3SGB I;  1FAQ A;  1WGT A;  4HGU A;  2LEO A;  3PDN A;  3QWP A;  2N71 A;  5E3P A;  3FC3 A;  1W3S A;  1Y1C A;  2GIV A;  1TUS A;  3TOA A;  1LR7 A;  1SGE I;  4SGB I;  1HDL A;  3UOE A;  1TUR A;  1U5K A;  1W4R A;  1XX6 A;  2DIP A;  2KMO A;  1R79 A;  3D00 A;  2JYY A;  1R0R I;  1SGP I;  2JW6 A;  3QAH A;  1H0Z A;  1M8C A;  1YTP A;  1MJ9 A;  1CGI I;  1IY5 A;  2KMQ A;  1OYV I;  2ENZ A;  1CT2 I;  1P9Z A;  2YQP A;  3OVO A;  3SGQ I;  2E5R A;  2L7X A;  2ERW A;  2V53 A;  3R5C A;  2SGD I;  1TBQ R;  1KBF A; 
#chains in the Genus database with same CATH homology
 1LR8 A;  2NU0 I;  2QQD A;  1XA6 A;  1HPT A;  5HI7 A;  1CT0 I;  2L8E A;  1FAR A;  3MEK A;  2P6A C;  4B6D A;  1SGN I;  1N13 A;  2XRC A;  3VE5 A;  1V1H A;  3GOX A;  1UVG A;  1BMO A;  2F3C I;  4E1P A;  1TOT A;  1XBT A;  3RU0 A;  1HJA I;  1OMT A;  1SGD I;  2E73 A;  2NU2 I;  2N1A B;  1LR9 A;  3CXL A;  3UEY A;  1UUC A;  1KBE A;  4A24 A;  5FUX A;  2OD1 A;  4E1R A;  2JA1 A;  5EX0 A;  1PTQ A;  3VDU A;  2WVJ A;  2SGE I;  2B8T A;  1PPF I;  3UEJ A;  1TBR R;  1DS3 I;  2KMR A;  2N52 A;  1TGS I;  2B0U C;  1X74 A;  3UGD A;  1SGR I;  2W0T A;  2ARP F;  3OXG A;  2KMP A;  3UGL A;  3UGI A;  2CJS C;  2NU4 I;  1CE3 A;  2SGF I;  1CT4 I;  2LUY A;  2M5X A;  1FYB A;  1KMA A;  2QQ0 A;  2GKV A;  3KY9 A;  2N17 A;  2DB6 A;  1AN1 I;  2ORW A;  3HH2 C;  2GVI A;  3OXL A;  1BUS A;  1IY6 A;  2ENN A;  1TIH A;  2ODD A;  2ROW A;  3SEK C;  1CGJ I;  4UXH A;  5HQ8 A;  2V1C A;  1TBO A;  1IW4 A;  2JXD A;  2ORV A;  5DAE A;  3VDP A;  1PTR A;  4OVO A;  2FNF X;  4UXI A;  2GKT I;  4UXJ A;  5CCL A;  1OVO A;  1X4S A;  1Y8F A;  3OL0 A;  1M8B A;  1YU6 C;  2GKR I;  4FKD A;  2KCX A;  3E59 A;  2SGP I;  1VDD A;  1PJU A;  3TJQ A;  4GI3 C;  5CCM A;  2WCY A;  2SGQ I;  2JZM A;  1TBN A;  3BJI A;  1Z7K B;  2OVO A;  2J87 A;  5JHW C;  2V1C C;  5FUY A;  1CHO I;  2YUU A;  2NU1 I;  5EX3 A;  2UZ3 A;  1UVF A;  1PCE A;  1RFH A;  1CSO I;  1OMU A;  3OXF A;  2NU3 I;  3UFF A;  2QQC A;  2A20 A;  2ELI A;  1SGQ I;  3QTL D;  2QQE A;  1NUB A;  5FUV A;  2QPO A;  4JCV E;  1Y1B A;  1DS2 I;  2J9R A;  1V1I A;  4L9M A;  1SGY I;  3B4V C;  2VRW B;  2BUS A;  1MT1 A;  5FUW A;  1FAQ A;  2K9H A;  3E2I A;  3SGB I;  4HGU A;  2LEO A;  3PDN A;  3QWP A;  2N71 A;  3FC3 A;  1W3S A;  1Y1C A;  1TUS A;  1LR7 A;  1SGE I;  4SGB I;  1HDL A;  1TUR A;  1U5K A;  1W4R A;  1XX6 A;  2DIP A;  2KMO A;  1R79 A;  3D00 A;  2JYY A;  1R0R I;  1SGP I;  2JW6 A;  1H0Z A;  1M8C A;  1YTP A;  1IY5 A;  1CGI I;  2KMQ A;  1OYV I;  2ENZ A;  1CT2 I;  2YQP A;  3OVO A;  3SGQ I;  2E5R A;  2L7X A;  2ERW A;  2V53 A;  2SGD I;  1TBQ R;  1KBF A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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