2DB6A

Solution structure of rsgi ruh-051, a c1 domain of stac3 from human cdna
Total Genus 9
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
9
sequence length
74
structure length
74
Chain Sequence
GSSGSSGEPPKLVNDKPHKFKDHFFKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSYVEMQRCSGPSSG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Solution structure of RSGI RUH-051, a C1 domain of STAC3 from human cDNA
rcsb
molecule tags Structural genomics, unknown function
source organism Homo sapiens
molecule keywords SH3 and cysteine rich domain 3
total genus 9
structure length 74
sequence length 74
ec nomenclature
pdb deposition date 2005-12-15
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.20 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 2db6A01
5FUWA 1RFHA 2J87A 2ENNA 1KBFA 1TBOA 4UXHA 1PTRA 1XBTA 3UEJA 3UGLA 1W4RA 2QQEA 4UXJA 1KBEA 5FUYA 1XX6A 1R79A 5FUVA 3UGDA 2ORVA 1FAQA 3KY9A 2JA1A 4L9MA 2ENZA 3BJIA 2E73A 3CXLA 2QPOA 2J9RA 2ROWA 2UZ3A 4FKDA 2QQ0A 4UXIA 3UFFA 5FUXA 3E2IA 2YUUA 3UGIA 1TBNA 2FNFX 2WVJA 1Y8FA 2DB6A 2GVIA 1FARA 1PTQA 2VRWB 2ORWA 3UEYA 4B6DA 2ELIA 2B8TA 1XA6A
chains in the Genus database with same CATH superfamily
3HH2C 2P6AC 1LR7A 4A24A 3OXLA 1HPTA 1Q9BA 2ENNA 2E5RA 1CSOI 1XBTA 4UXHA 1CT0I 2QQEA 1K7TA 1MJBA 1UVGA 3UOEA 1KBEA 2N17A 5FUYA 1XX6A 7WGAA 2QQCA 2OU2A 1HJAI 5DAEA 5FUVA 4AMLA 2Y0MA 1KMAA 1SGNI 2NU0I 1H0ZA 1HEVA 3VDPA 2NU2I 2ORVA 1NXUA 5CCLA 3KY9A 2JA1A 1DS2I 2ENZA 2E73A 2UVOA 3BJIA 2JW6A 3CXLA 2ROWA 1WGCA 2UZ3A 4FKDA 3OXGA 4WP4A 4UXIA 1MJ9A 4E1PA 1OYVI 1TBNA 2V53A 3TJQA 3R5CA 1CT4I 2N71A 2OVOA 1SGQI 2OZUA 3UEYA 2B0UC 2ELIA 3R5AA 1SGEI 1XA6A 2SGFI 1IW4A 1OMUA 3TO6A 3R5BA 2XRCA 1NUBA 1RFHA 1TBOA 1TBRR 3UGLA 2BUSA 1TGSI 2KMPA 1OMTA 1PPFI 2LUYA 5J8CA 1CHOI 1UHAA 3QTLD 5JHWC 1PCEA 2W0TA 2CWGA 1BUSA 2V1CA 1R0RI 1P9ZA 2GIVA 2N52A 5EX0A 3UGDA 1M8BA 1X4SA 3FC3A 5E3QA 4MPIA 3VE5A 1MJAA 3OVOA 2QQ0A 1TUSA 2JYYA 9WGAA 1CGJI 1K7UA 5CCMA 1YU6C 2A20A 2V1CC 1Y1CA 2FNFX 2WVJA 1WTJA 2DB6A 1MT1A 1SGDI 1SGPI 1TURA 3E59A 3QWPA 3SGQI 2ORWA 2LB7A 1V1HA 2B8TA 1FY7A 2F3CI 1TBQR 3GOXA 2X52A 2K9HA 1TIHA 1KBFA 3UEJA 2JZMA 4E1RA 1W4RA 1ULKA 2KMRA 1HDLA 3VDUA 2ARPF 3B4VC 4GI3C 1R79A 3MEKA 4SGBI 4JCVE 1IY5A 1CT2I 1ULMA 2ERWA 1WKXA 1FAQA 4L9MA 1YTPA 3SGBI 1X74A 2QPOA 2J9RA 3OL0A 4OVOA 2KCXA 2NU1I 1SGRI 3UFFA 5FUXA 2CWHA 2PQ8A 1AN1I 2WGCA 1OVOA 2DIPA 3UGIA 5HQ8A 1Y8FA 2L8EA 2CWFA 1FARA 2GKTI 1K7VA 1PTQA 1PJUA 2LEOA 2X3TA 3FSYA 5EX3A 4HGUA 3TO7A 2RIJA 4B6DA 1W3SA 2ODDA 3FSXA 3TO9A 2L7XA 1TOTA 2OD1A 5FUWA 1N13A 1IY6A 2J87A 1Y1BA 1PTRA 2GKRI 2M5XA 3QAHA 4UXJA 1UUCA 2CJSC 5HI7A 4DNCA 1BMOA 1S20A 5E3PA 2WCYA 5J8FA 1CE3A 3R5DA 3SEKC 1VDDA 1U5KA 2SGQI 3PDNA 1M8CA 5E3RA 1SGYI 3D00A 2KMOA 1DS3I 1WGTA 3TOAA 3RU0A 1LR8A 3OXFA 2JXDA 2NU3I 2QQDA 2DKVA 2YQPA 3E2IA 1P9GA 2YUUA 3TOBA 2N1AB 1FYBA 2KMQA 1V1IA 1CGII 2GVIA 2GKVA 2VRWB 2NU4I 1LR9A 2SGDI 1UVFA 1ULNA 1Z7KB 2SGPI 2SGEI 2RC4A 1Z2IA
chains in the Genus database with same CATH topology
3HH2C 2P6AC 1LR7A 4A24A 3OXLA 1HPTA 2ENNA 2E5RA 1CSOI 1XBTA 4UXHA 1CT0I 2QQEA 1UVGA 1KBEA 2N17A 5FUYA 1XX6A 2QQCA 1HJAI 5DAEA 5FUVA 1KMAA 1SGNI 2NU0I 1H0ZA 3VDPA 2NU2I 2ORVA 5CCLA 3KY9A 2JA1A 1DS2I 2ENZA 2E73A 3BJIA 3CXLA 2JW6A 2ROWA 2UZ3A 4FKDA 3OXGA 4UXIA 4E1PA 1OYVI 1TBNA 2V53A 3TJQA 1CT4I 2N71A 2OVOA 1SGQI 3UEYA 2B0UC 2ELIA 1SGEI 1XA6A 2SGFI 1IW4A 1OMUA 2XRCA 1NUBA 1RFHA 1TBOA 1TBRR 3UGLA 2BUSA 1TGSI 2KMPA 1OMTA 1PPFI 2LUYA 1CHOI 3QTLD 5JHWC 1PCEA 2W0TA 1BUSA 2V1CA 1R0RI 5EX0A 3UGDA 2N52A 1M8BA 1X4SA 3FC3A 3OVOA 2QQ0A 1TUSA 2JYYA 1CGJI 5CCMA 1YU6C 2A20A 2V1CC 1Y1CA 2FNFX 2WVJA 2DB6A 1MT1A 1SGDI 1SGPI 1TURA 3E59A 3QWPA 3SGQI 2ORWA 1V1HA 2B8TA 2F3CI 3GOXA 1TBQR 2K9HA 1TIHA 1KBFA 3UEJA 2JZMA 4E1RA 1W4RA 2KMRA 1HDLA 3VDUA 2ARPF 3B4VC 4GI3C 1R79A 3MEKA 4SGBI 4JCVE 1IY5A 1CT2I 2ERWA 1FAQA 4L9MA 1YTPA 3SGBI 1X74A 2QPOA 2J9RA 3OL0A 4OVOA 2KCXA 2NU1I 1SGRI 3UFFA 5FUXA 1AN1I 3UGIA 1OVOA 2DIPA 5HQ8A 1Y8FA 2L8EA 2GKTI 1FARA 3VE5A 1PTQA 1PJUA 2LEOA 5EX3A 4B6DA 4HGUA 1W3SA 2ODDA 2L7XA 1TOTA 2OD1A 5FUWA 1N13A 1IY6A 2J87A 1Y1BA 1PTRA 2GKRI 2M5XA 4UXJA 1UUCA 2CJSC 5HI7A 1BMOA 2WCYA 1CE3A 3SEKC 1VDDA 1U5KA 2SGQI 3PDNA 1M8CA 1SGYI 3D00A 2KMOA 1DS3I 3RU0A 1LR8A 3OXFA 2JXDA 2NU3I 2QQDA 2YQPA 3E2IA 2YUUA 1FYBA 2N1AB 2KMQA 1V1IA 1CGII 2GVIA 2GKVA 2VRWB 2NU4I 1LR9A 2SGDI 1UVFA 1Z7KB 2SGPI 2SGEI
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5FUW A;  1RFH A;  2J87 A;  2ENN A;  1KBF A;  1TBO A;  4UXH A;  1PTR A;  1XBT A;  3UEJ A;  3UGL A;  1W4R A;  2QQE A;  4UXJ A;  1KBE A;  5FUY A;  1XX6 A;  1R79 A;  5FUV A;  3UGD A;  2ORV A;  1FAQ A;  3KY9 A;  2JA1 A;  4L9M A;  2ENZ A;  3BJI A;  2E73 A;  3CXL A;  2QPO A;  2J9R A;  2ROW A;  2UZ3 A;  4FKD A;  2QQ0 A;  4UXI A;  3UFF A;  5FUX A;  3E2I A;  2YUU A;  3UGI A;  1TBN A;  2FNF X;  2WVJ A;  1Y8F A;  2DB6 A;  2GVI A;  1FAR A;  1PTQ A;  2VRW B;  2ORW A;  3UEY A;  4B6D A;  2ELI A;  2B8T A;  1XA6 A; 
#chains in the Genus database with same CATH topology
 3HH2 C;  2P6A C;  1LR7 A;  4A24 A;  3OXL A;  1HPT A;  1Q9B A;  2ENN A;  2E5R A;  1CSO I;  1XBT A;  4UXH A;  1CT0 I;  2QQE A;  1K7T A;  1MJB A;  1UVG A;  3UOE A;  1KBE A;  2N17 A;  5FUY A;  1XX6 A;  7WGA A;  2QQC A;  2OU2 A;  1HJA I;  5DAE A;  5FUV A;  4AML A;  2Y0M A;  1KMA A;  1SGN I;  2NU0 I;  1H0Z A;  1HEV A;  3VDP A;  2NU2 I;  2ORV A;  1NXU A;  5CCL A;  3KY9 A;  2JA1 A;  1DS2 I;  2ENZ A;  2E73 A;  2UVO A;  3BJI A;  2JW6 A;  3CXL A;  2ROW A;  1WGC A;  2UZ3 A;  4FKD A;  3OXG A;  4WP4 A;  4UXI A;  1MJ9 A;  4E1P A;  1OYV I;  1TBN A;  2V53 A;  3TJQ A;  3R5C A;  1CT4 I;  2N71 A;  2OVO A;  1SGQ I;  2OZU A;  3UEY A;  2B0U C;  2ELI A;  3R5A A;  1SGE I;  1XA6 A;  2SGF I;  1IW4 A;  1OMU A;  3TO6 A;  3R5B A;  2XRC A;  1NUB A;  1RFH A;  1TBO A;  1TBR R;  3UGL A;  2BUS A;  1TGS I;  2KMP A;  1OMT A;  1PPF I;  2LUY A;  5J8C A;  1CHO I;  1UHA A;  3QTL D;  5JHW C;  1PCE A;  2W0T A;  2CWG A;  1BUS A;  2V1C A;  1R0R I;  1P9Z A;  2GIV A;  2N52 A;  5EX0 A;  3UGD A;  1M8B A;  1X4S A;  3FC3 A;  5E3Q A;  4MPI A;  3VE5 A;  1MJA A;  3OVO A;  2QQ0 A;  1TUS A;  2JYY A;  9WGA A;  1CGJ I;  1K7U A;  5CCM A;  1YU6 C;  2A20 A;  2V1C C;  1Y1C A;  2FNF X;  2WVJ A;  1WTJ A;  2DB6 A;  1MT1 A;  1SGD I;  1SGP I;  1TUR A;  3E59 A;  3QWP A;  3SGQ I;  2ORW A;  2LB7 A;  1V1H A;  2B8T A;  1FY7 A;  2F3C I;  1TBQ R;  3GOX A;  2X52 A;  2K9H A;  1TIH A;  1KBF A;  3UEJ A;  2JZM A;  4E1R A;  1W4R A;  1ULK A;  2KMR A;  1HDL A;  3VDU A;  2ARP F;  3B4V C;  4GI3 C;  1R79 A;  3MEK A;  4SGB I;  4JCV E;  1IY5 A;  1CT2 I;  1ULM A;  2ERW A;  1WKX A;  1FAQ A;  4L9M A;  1YTP A;  3SGB I;  1X74 A;  2QPO A;  2J9R A;  3OL0 A;  4OVO A;  2KCX A;  2NU1 I;  1SGR I;  3UFF A;  5FUX A;  2CWH A;  2PQ8 A;  1AN1 I;  2WGC A;  1OVO A;  2DIP A;  3UGI A;  5HQ8 A;  1Y8F A;  2L8E A;  2CWF A;  1FAR A;  2GKT I;  1K7V A;  1PTQ A;  1PJU A;  2LEO A;  2X3T A;  3FSY A;  5EX3 A;  4HGU A;  3TO7 A;  2RIJ A;  4B6D A;  1W3S A;  2ODD A;  3FSX A;  3TO9 A;  2L7X A;  1TOT A;  2OD1 A;  5FUW A;  1N13 A;  1IY6 A;  2J87 A;  1Y1B A;  1PTR A;  2GKR I;  2M5X A;  3QAH A;  4UXJ A;  1UUC A;  2CJS C;  5HI7 A;  4DNC A;  1BMO A;  1S20 A;  5E3P A;  2WCY A;  5J8F A;  1CE3 A;  3R5D A;  3SEK C;  1VDD A;  1U5K A;  2SGQ I;  3PDN A;  1M8C A;  5E3R A;  1SGY I;  3D00 A;  2KMO A;  1DS3 I;  1WGT A;  3TOA A;  3RU0 A;  1LR8 A;  3OXF A;  2JXD A;  2NU3 I;  2QQD A;  2DKV A;  2YQP A;  3E2I A;  1P9G A;  2YUU A;  3TOB A;  2N1A B;  1FYB A;  2KMQ A;  1V1I A;  1CGI I;  2GVI A;  2GKV A;  2VRW B;  2NU4 I;  1LR9 A;  2SGD I;  1UVF A;  1ULN A;  1Z7K B;  2SGP I;  2SGE I;  2RC4 A;  1Z2I A; 
#chains in the Genus database with same CATH homology
 3HH2 C;  2P6A C;  1LR7 A;  4A24 A;  3OXL A;  1HPT A;  2ENN A;  2E5R A;  1CSO I;  1XBT A;  4UXH A;  1CT0 I;  2QQE A;  1UVG A;  1KBE A;  2N17 A;  5FUY A;  1XX6 A;  2QQC A;  1HJA I;  5DAE A;  5FUV A;  1KMA A;  1SGN I;  2NU0 I;  1H0Z A;  3VDP A;  2NU2 I;  2ORV A;  5CCL A;  3KY9 A;  2JA1 A;  1DS2 I;  2ENZ A;  2E73 A;  3BJI A;  3CXL A;  2JW6 A;  2ROW A;  2UZ3 A;  4FKD A;  3OXG A;  4UXI A;  4E1P A;  1OYV I;  1TBN A;  2V53 A;  3TJQ A;  1CT4 I;  2N71 A;  2OVO A;  1SGQ I;  3UEY A;  2B0U C;  2ELI A;  1SGE I;  1XA6 A;  2SGF I;  1IW4 A;  1OMU A;  2XRC A;  1NUB A;  1RFH A;  1TBO A;  1TBR R;  3UGL A;  2BUS A;  1TGS I;  2KMP A;  1OMT A;  1PPF I;  2LUY A;  1CHO I;  3QTL D;  5JHW C;  1PCE A;  2W0T A;  1BUS A;  2V1C A;  1R0R I;  5EX0 A;  3UGD A;  2N52 A;  1M8B A;  1X4S A;  3FC3 A;  3OVO A;  2QQ0 A;  1TUS A;  2JYY A;  1CGJ I;  5CCM A;  1YU6 C;  2A20 A;  2V1C C;  1Y1C A;  2FNF X;  2WVJ A;  2DB6 A;  1MT1 A;  1SGD I;  1SGP I;  1TUR A;  3E59 A;  3QWP A;  3SGQ I;  2ORW A;  1V1H A;  2B8T A;  2F3C I;  3GOX A;  1TBQ R;  2K9H A;  1TIH A;  1KBF A;  3UEJ A;  2JZM A;  4E1R A;  1W4R A;  2KMR A;  1HDL A;  3VDU A;  2ARP F;  3B4V C;  4GI3 C;  1R79 A;  3MEK A;  4SGB I;  4JCV E;  1IY5 A;  1CT2 I;  2ERW A;  1FAQ A;  4L9M A;  1YTP A;  3SGB I;  1X74 A;  2QPO A;  2J9R A;  3OL0 A;  4OVO A;  2KCX A;  2NU1 I;  1SGR I;  3UFF A;  5FUX A;  1AN1 I;  3UGI A;  1OVO A;  2DIP A;  5HQ8 A;  1Y8F A;  2L8E A;  2GKT I;  1FAR A;  3VE5 A;  1PTQ A;  1PJU A;  2LEO A;  5EX3 A;  4B6D A;  4HGU A;  1W3S A;  2ODD A;  2L7X A;  1TOT A;  2OD1 A;  5FUW A;  1N13 A;  1IY6 A;  2J87 A;  1Y1B A;  1PTR A;  2GKR I;  2M5X A;  4UXJ A;  1UUC A;  2CJS C;  5HI7 A;  1BMO A;  2WCY A;  1CE3 A;  3SEK C;  1VDD A;  1U5K A;  2SGQ I;  3PDN A;  1M8C A;  1SGY I;  3D00 A;  2KMO A;  1DS3 I;  3RU0 A;  1LR8 A;  3OXF A;  2JXD A;  2NU3 I;  2QQD A;  2YQP A;  3E2I A;  2YUU A;  1FYB A;  2N1A B;  2KMQ A;  1V1I A;  1CGI I;  2GVI A;  2GKV A;  2VRW B;  2NU4 I;  1LR9 A;  2SGD I;  1UVF A;  1Z7K B;  2SGP I;  2SGE I; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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