2N17 | Genus

Total Genus 6

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	6
sequence length	56
structure length	56
Chain Sequence	CQLFCPMIYAPICATDGVSQRTFSNPCDLKVYNCWNPDNPYKEVKVGECDDANKPV

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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Hydrolase
source organism	Coptotermes formosanus
publication title	A Kazal-Type Serine Protease Inhibitor from the Defense Gland Secretion of the Subterranean Termite Coptotermes formosanus Shiraki. pubmed doi rcsb
molecule keywords	Lysozyme-Protease Inhibitor Protein
total genus	6
structure length	56
sequence length	56
ec nomenclature
pdb deposition date	2015-03-23

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF07648	Kazal_2	Kazal-type serine protease inhibitor domain

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
3.30.60.30	Alpha Beta	2-Layer Sandwich	Wheat Germ Agglutinin (Isolectin 2); domain 1	Wheat Germ Agglutinin (Isolectin 2); domain 1	2n17A00

4SGBI 2N52A 1TBQR 3OVOA 2GKVA 1SGQI 2NU3I 1UUCA 2NU4I 2SGDI 1CSOI 2ARPF 1PJUA 3SEKC 2JYYA 1CHOI 2NU2I 1BMOA 2KMPA 1CT0I 1HJAI 2QQCA 2QQDA 2SGPI 4HGUA 1M8BA 1KMAA 2KMRA 3TJQA 2SGQI 1CE3A 2F3CI 3B4VC 5JHWC 1YU6C 2V53A 4OVOA 1HPTA 1YTPA 1N13A 2KMOA 2GKRI 1CT4I 2JXDA 1SGRI 2BUSA 1FYBA 2SGFI 2P6AC 3QTLD 1OYVI 1TGSI 2N17A 1NUBA 1DS3I 1SGNI 1UVFA 2KMQA 1MT1A 2WCYA 1CGJI 1Y1CA 1SGYI 1LR7A 2JZMA 1OMUA 1PCEA 2GKTI 3SGQI 1TURA 2SGEI 1BUSA 1LR8A 1OMTA 1HDLA 1M8CA 2OVOA 1UVGA 4GI3C 1IY5A 1IW4A 2LEOA 1TIHA 2B0UC 2KCXA 1SGDI 1CT2I 1PPFI 1AN1I 1R0RI 1CGII 5DAEA 2ERWA 1TBRR 2XRCA 1SGEI 2N71A 1LR9A 1TUSA 2M5XA 1DS2I 3HH2C 1H0ZA 2NU0I 1Y1BA 1OVOA 3SGBI 1IY6A 1SGPI 2NU1I 1Z7KB
chains in the Genus database with same CATH superfamily

2E73A 1FAQA 3RU0A 1W4RA 1R79A 4SGBI 4FKDA 3FSYA 2N52A 1TBQR 1WGTA 3OVOA 1XX6A 2A20A 1SGQI 2GKVA 2NU3I 1ULMA 2V1CC 1UUCA 3UFFA 3UOEA 1P9ZA 5FUXA 4JCVE 1TOTA 4MPIA 3R5CA 2LB7A 4L9MA 2NU4I 2SGDI 1CSOI 2ENNA 2VRWB 5E3RA 2ARPF 1PJUA 5FUVA 3SEKC 2X3TA 1XA6A 3OXFA 1MJAA 2JYYA 3TOBA 1CHOI 2NU2I 1BMOA 1WGCA 2DKVA 2KMPA 3E2IA 4A24A 5E3QA 2V1CA 1XBTA 1CT0I 1HJAI 1K7VA 2QQCA 2QQDA 2SGPI 2WVJA 4HGUA 5EX3A 3UGDA 1K7TA 1HEVA 1M8BA 1KMAA 2KMRA 4UXIA 2ORVA 2E5RA 2UVOA 3TJQA 2SGQI 1CE3A 3GOXA 1Y8FA 2YUUA 2YQPA 2K9HA 2PQ8A 2F3CI 2QQ0A 2QQEA 3BJIA 2J87A 2JA1A 3B4VC 7WGAA 1U5KA 2L8EA 5JHWC 1P9GA 1YU6C 2V53A 3D00A 4OVOA 4E1RA 1PTQA 1V1HA 3UGLA 1HPTA 2Y0MA 1VDDA 1YTPA 1FARA 2L7XA 5FUYA 2CWHA 2ENZA 1N13A 2ELIA 2GKRI 2KMOA 1CT4I 2ORWA 2W0TA 2JXDA 5HI7A 1SGRI 2BUSA 3FC3A 1TBNA 1WTJA 1Q9BA 2GVIA 1TBOA 2J9RA 3TO9A 1FYBA 2SGFI 1KBEA 2P6AC 3PDNA 3QTLD 1OYVI 1TGSI 1FY7A 2N17A 3VDPA 1NUBA 9WGAA 4B6DA 1DS3I 3VE5A 1SGNI 1UVFA 2KMQA 1MT1A 2B8TA 1UHAA 2WCYA 4WP4A 5CCLA 5J8CA 1CGJI 2FNFX 1Y1CA 5CCMA 1SGYI 2OZUA 2DIPA 2CWGA 2RIJA 4UXHA 2RC4A 1LR7A 3TO7A 2WGCA 1MJBA 1Z2IA 2CJSC 3R5AA 3FSXA 3UGIA 2JZMA 3QAHA 1OMUA 1PCEA 2GKTI 1V1IA 5J8FA 5EX0A 3SGQI 5FUWA 1KBFA 1TURA 3OXGA 2SGEI 2ODDA 2DB6A 1PTRA 1BUSA 1LR8A 1OMTA 1RFHA 1M8CA 1K7UA 3OXLA 1HDLA 4E1PA 2OVOA 1UVGA 4GI3C 2GIVA 2UZ3A 1IW4A 1ULNA 1IY5A 2OU2A 3TOAA 5E3PA 2LEOA 2LUYA 1WKXA 1TIHA 1MJ9A 2B0UC 2KCXA 3UEYA 1SGDI 1CT2I 1PPFI 1AN1I 1R0RI 1CGII 3R5DA 5DAEA 2ERWA 2QPOA 2N1AB 3QWPA 1TBRR 1X4SA 2XRCA 3CXLA 3KY9A 1SGEI 1S20A 3VDUA 2N71A 1LR9A 2X52A 3E59A 1TUSA 2M5XA 3TO6A 1DS2I 3HH2C 5HQ8A 3OL0A 1NXUA 4AMLA 1H0ZA 2CWFA 2NU0I 1Y1BA 1OVOA 3SGBI 1ULKA 4UXJA 1IY6A 3R5BA 1X74A 3MEKA 4DNCA 2OD1A 1SGPI 2JW6A 1W3SA 2NU1I 3UEJA 2ROWA 1Z7KB
chains in the Genus database with same CATH topology

2E73A 1FAQA 3RU0A 1W4RA 1R79A 4SGBI 4FKDA 2N52A 1TBQR 3OVOA 1XX6A 2A20A 1SGQI 2GKVA 2NU3I 2V1CC 1UUCA 3UFFA 5FUXA 4JCVE 1TOTA 4L9MA 2NU4I 2SGDI 1CSOI 2ENNA 2VRWB 2ARPF 1PJUA 5FUVA 3SEKC 3OXFA 1XA6A 2JYYA 1CHOI 2NU2I 1BMOA 2KMPA 3E2IA 4A24A 2V1CA 1CT0I 1HJAI 2QQCA 2QQDA 2SGPI 2WVJA 4HGUA 5EX3A 3UGDA 1M8BA 1KMAA 2KMRA 4UXIA 1W3SA 2ORVA 2E5RA 3TJQA 2SGQI 1CE3A 3GOXA 1Y8FA 2YUUA 2YQPA 2K9HA 2F3CI 2QQ0A 2QQEA 3BJIA 2J87A 2JA1A 3B4VC 1U5KA 2L8EA 5JHWC 1YU6C 3D00A 2V53A 4OVOA 4E1RA 1PTQA 1V1HA 3UGLA 1HPTA 1VDDA 1YTPA 1FARA 2L7XA 5FUYA 2ENZA 1N13A 2ELIA 2GKRI 2KMOA 1CT4I 2ORWA 2W0TA 2JXDA 5HI7A 1SGRI 2BUSA 3FC3A 1TBNA 2GVIA 1TBOA 2J9RA 1FYBA 2SGFI 1KBEA 2P6AC 3PDNA 3QTLD 1OYVI 1TGSI 2N17A 3VDPA 1NUBA 4B6DA 1DS3I 3VE5A 1SGNI 1UVFA 2KMQA 1MT1A 2B8TA 2WCYA 5CCLA 1CGJI 2FNFX 1Y1CA 5CCMA 1SGYI 2DIPA 4UXHA 1LR7A 2CJSC 3UGIA 2JZMA 1OMUA 1PCEA 2GKTI 1V1IA 5EX0A 3SGQI 5FUWA 1KBFA 1TURA 3OXGA 2SGEI 2ODDA 2DB6A 1PTRA 1BUSA 1LR8A 1OMTA 1RFHA 1M8CA 3OXLA 1HDLA 4E1PA 2OVOA 1UVGA 4GI3C 2UZ3A 1IW4A 1IY5A 2LEOA 2LUYA 1TIHA 2B0UC 2KCXA 3UEYA 1SGDI 1CT2I 1PPFI 1AN1I 1R0RI 1CGII 5DAEA 2ERWA 2QPOA 2N1AB 3QWPA 1TBRR 1X4SA 2XRCA 3CXLA 3KY9A 1SGEI 3VDUA 2N71A 1LR9A 3E59A 1TUSA 2M5XA 1DS2I 3HH2C 5HQ8A 3OL0A 1H0ZA 2NU0I 1Y1BA 1OVOA 3SGBI 1IY6A 4UXJA 1X74A 3MEKA 2OD1A 1SGPI 2JW6A 1XBTA 2NU1I 3UEJA 2ROWA 1Z7KB
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 4SGB I;  2N52 A;  1TBQ R;  3OVO A;  2GKV A;  1SGQ I;  2NU3 I;  1UUC A;  2NU4 I;  2SGD I;  1CSO I;  2ARP F;  1PJU A;  3SEK C;  2JYY A;  1CHO I;  2NU2 I;  1BMO A;  2KMP A;  1CT0 I;  1HJA I;  2QQC A;  2QQD A;  2SGP I;  4HGU A;  1M8B A;  1KMA A;  2KMR A;  3TJQ A;  2SGQ I;  1CE3 A;  2F3C I;  3B4V C;  5JHW C;  1YU6 C;  2V53 A;  4OVO A;  1HPT A;  1YTP A;  1N13 A;  2KMO A;  2GKR I;  1CT4 I;  2JXD A;  1SGR I;  2BUS A;  1FYB A;  2SGF I;  2P6A C;  3QTL D;  1OYV I;  1TGS I;  2N17 A;  1NUB A;  1DS3 I;  1SGN I;  1UVF A;  2KMQ A;  1MT1 A;  2WCY A;  1CGJ I;  1Y1C A;  1SGY I;  1LR7 A;  2JZM A;  1OMU A;  1PCE A;  2GKT I;  3SGQ I;  1TUR A;  2SGE I;  1BUS A;  1LR8 A;  1OMT A;  1HDL A;  1M8C A;  2OVO A;  1UVG A;  4GI3 C;  1IY5 A;  1IW4 A;  2LEO A;  1TIH A;  2B0U C;  2KCX A;  1SGD I;  1CT2 I;  1PPF I;  1AN1 I;  1R0R I;  1CGI I;  5DAE A;  2ERW A;  1TBR R;  2XRC A;  1SGE I;  2N71 A;  1LR9 A;  1TUS A;  2M5X A;  1DS2 I;  3HH2 C;  1H0Z A;  2NU0 I;  1Y1B A;  1OVO A;  3SGB I;  1IY6 A;  1SGP I;  2NU1 I;  1Z7K B; 
#chains in the Genus database with same CATH topology
 2E73 A;  1FAQ A;  3RU0 A;  1W4R A;  1R79 A;  4SGB I;  4FKD A;  3FSY A;  2N52 A;  1TBQ R;  1WGT A;  3OVO A;  1XX6 A;  2A20 A;  1SGQ I;  2GKV A;  2NU3 I;  1ULM A;  2V1C C;  1UUC A;  3UFF A;  3UOE A;  1P9Z A;  5FUX A;  4JCV E;  1TOT A;  4MPI A;  3R5C A;  2LB7 A;  4L9M A;  2NU4 I;  2SGD I;  1CSO I;  2ENN A;  2VRW B;  5E3R A;  2ARP F;  1PJU A;  5FUV A;  3SEK C;  2X3T A;  1XA6 A;  3OXF A;  1MJA A;  2JYY A;  3TOB A;  1CHO I;  2NU2 I;  1BMO A;  1WGC A;  2DKV A;  2KMP A;  3E2I A;  4A24 A;  5E3Q A;  2V1C A;  1XBT A;  1CT0 I;  1HJA I;  1K7V A;  2QQC A;  2QQD A;  2SGP I;  2WVJ A;  4HGU A;  5EX3 A;  3UGD A;  1K7T A;  1HEV A;  1M8B A;  1KMA A;  2KMR A;  4UXI A;  2ORV A;  2E5R A;  2UVO A;  3TJQ A;  2SGQ I;  1CE3 A;  3GOX A;  1Y8F A;  2YUU A;  2YQP A;  2K9H A;  2PQ8 A;  2F3C I;  2QQ0 A;  2QQE A;  3BJI A;  2J87 A;  2JA1 A;  3B4V C;  7WGA A;  1U5K A;  2L8E A;  5JHW C;  1P9G A;  1YU6 C;  2V53 A;  3D00 A;  4OVO A;  4E1R A;  1PTQ A;  1V1H A;  3UGL A;  1HPT A;  2Y0M A;  1VDD A;  1YTP A;  1FAR A;  2L7X A;  5FUY A;  2CWH A;  2ENZ A;  1N13 A;  2ELI A;  2GKR I;  2KMO A;  1CT4 I;  2ORW A;  2W0T A;  2JXD A;  5HI7 A;  1SGR I;  2BUS A;  3FC3 A;  1TBN A;  1WTJ A;  1Q9B A;  2GVI A;  1TBO A;  2J9R A;  3TO9 A;  1FYB A;  2SGF I;  1KBE A;  2P6A C;  3PDN A;  3QTL D;  1OYV I;  1TGS I;  1FY7 A;  2N17 A;  3VDP A;  1NUB A;  9WGA A;  4B6D A;  1DS3 I;  3VE5 A;  1SGN I;  1UVF A;  2KMQ A;  1MT1 A;  2B8T A;  1UHA A;  2WCY A;  4WP4 A;  5CCL A;  5J8C A;  1CGJ I;  2FNF X;  1Y1C A;  5CCM A;  1SGY I;  2OZU A;  2DIP A;  2CWG A;  2RIJ A;  4UXH A;  2RC4 A;  1LR7 A;  3TO7 A;  2WGC A;  1MJB A;  1Z2I A;  2CJS C;  3R5A A;  3FSX A;  3UGI A;  2JZM A;  3QAH A;  1OMU A;  1PCE A;  2GKT I;  1V1I A;  5J8F A;  5EX0 A;  3SGQ I;  5FUW A;  1KBF A;  1TUR A;  3OXG A;  2SGE I;  2ODD A;  2DB6 A;  1PTR A;  1BUS A;  1LR8 A;  1OMT A;  1RFH A;  1M8C A;  1K7U A;  3OXL A;  1HDL A;  4E1P A;  2OVO A;  1UVG A;  4GI3 C;  2GIV A;  2UZ3 A;  1IW4 A;  1ULN A;  1IY5 A;  2OU2 A;  3TOA A;  5E3P A;  2LEO A;  2LUY A;  1WKX A;  1TIH A;  1MJ9 A;  2B0U C;  2KCX A;  3UEY A;  1SGD I;  1CT2 I;  1PPF I;  1AN1 I;  1R0R I;  1CGI I;  3R5D A;  5DAE A;  2ERW A;  2QPO A;  2N1A B;  3QWP A;  1TBR R;  1X4S A;  2XRC A;  3CXL A;  3KY9 A;  1SGE I;  1S20 A;  3VDU A;  2N71 A;  1LR9 A;  2X52 A;  3E59 A;  1TUS A;  2M5X A;  3TO6 A;  1DS2 I;  3HH2 C;  5HQ8 A;  3OL0 A;  1NXU A;  4AML A;  1H0Z A;  2CWF A;  2NU0 I;  1Y1B A;  1OVO A;  3SGB I;  1ULK A;  4UXJ A;  1IY6 A;  3R5B A;  1X74 A;  3MEK A;  4DNC A;  2OD1 A;  1SGP I;  2JW6 A;  1W3S A;  2NU1 I;  3UEJ A;  2ROW A;  1Z7K B; 
#chains in the Genus database with same CATH homology
 2E73 A;  1FAQ A;  3RU0 A;  1W4R A;  1R79 A;  4SGB I;  4FKD A;  2N52 A;  1TBQ R;  3OVO A;  1XX6 A;  2A20 A;  1SGQ I;  2GKV A;  2NU3 I;  2V1C C;  1UUC A;  3UFF A;  5FUX A;  4JCV E;  1TOT A;  4L9M A;  2NU4 I;  2SGD I;  1CSO I;  2ENN A;  2VRW B;  2ARP F;  1PJU A;  5FUV A;  3SEK C;  3OXF A;  1XA6 A;  2JYY A;  1CHO I;  2NU2 I;  1BMO A;  2KMP A;  3E2I A;  4A24 A;  2V1C A;  1CT0 I;  1HJA I;  2QQC A;  2QQD A;  2SGP I;  2WVJ A;  4HGU A;  5EX3 A;  3UGD A;  1M8B A;  1KMA A;  2KMR A;  4UXI A;  1W3S A;  2ORV A;  2E5R A;  3TJQ A;  2SGQ I;  1CE3 A;  3GOX A;  1Y8F A;  2YUU A;  2YQP A;  2K9H A;  2F3C I;  2QQ0 A;  2QQE A;  3BJI A;  2J87 A;  2JA1 A;  3B4V C;  1U5K A;  2L8E A;  5JHW C;  1YU6 C;  3D00 A;  2V53 A;  4OVO A;  4E1R A;  1PTQ A;  1V1H A;  3UGL A;  1HPT A;  1VDD A;  1YTP A;  1FAR A;  2L7X A;  5FUY A;  2ENZ A;  1N13 A;  2ELI A;  2GKR I;  2KMO A;  1CT4 I;  2ORW A;  2W0T A;  2JXD A;  5HI7 A;  1SGR I;  2BUS A;  3FC3 A;  1TBN A;  2GVI A;  1TBO A;  2J9R A;  1FYB A;  2SGF I;  1KBE A;  2P6A C;  3PDN A;  3QTL D;  1OYV I;  1TGS I;  2N17 A;  3VDP A;  1NUB A;  4B6D A;  1DS3 I;  3VE5 A;  1SGN I;  1UVF A;  2KMQ A;  1MT1 A;  2B8T A;  2WCY A;  5CCL A;  1CGJ I;  2FNF X;  1Y1C A;  5CCM A;  1SGY I;  2DIP A;  4UXH A;  1LR7 A;  2CJS C;  3UGI A;  2JZM A;  1OMU A;  1PCE A;  2GKT I;  1V1I A;  5EX0 A;  3SGQ I;  5FUW A;  1KBF A;  1TUR A;  3OXG A;  2SGE I;  2ODD A;  2DB6 A;  1PTR A;  1BUS A;  1LR8 A;  1OMT A;  1RFH A;  1M8C A;  3OXL A;  1HDL A;  4E1P A;  2OVO A;  1UVG A;  4GI3 C;  2UZ3 A;  1IW4 A;  1IY5 A;  2LEO A;  2LUY A;  1TIH A;  2B0U C;  2KCX A;  3UEY A;  1SGD I;  1CT2 I;  1PPF I;  1AN1 I;  1R0R I;  1CGI I;  5DAE A;  2ERW A;  2QPO A;  2N1A B;  3QWP A;  1TBR R;  1X4S A;  2XRC A;  3CXL A;  3KY9 A;  1SGE I;  3VDU A;  2N71 A;  1LR9 A;  3E59 A;  1TUS A;  2M5X A;  1DS2 I;  3HH2 C;  5HQ8 A;  3OL0 A;  1H0Z A;  2NU0 I;  1Y1B A;  1OVO A;  3SGB I;  1IY6 A;  4UXJ A;  1X74 A;  3MEK A;  2OD1 A;  1SGP I;  2JW6 A;  1XBT A;  2NU1 I;  3UEJ A;  2ROW A;  1Z7K B;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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2N17A

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations