2KZ0A

Solution structure of a bola protein (ech_0303) from ehrlichia chaffeensis. seattle structural genomics center for infectious disease target ehcha.10365.a
Total Genus 18

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
18
sequence length
76
structure length
76
Chain Sequence
PGSMTVTQSQLELLIRNAFPEAEITVTSLVGDNNHYSIKVISSQFQGKSKLEQHRMIYKVLDGLNIHAIQIQTGCK

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH1 (9-18)TVIII1 (3-6)TII1 (6-9)TI1 (19-22)S1 (22-27)TIV2 (31-34)EMPTYS2 (37-42)O2 (73-75)3H1 (43-45)TII2 (45-48)AH2 (50-61)S3 (71-73)TI2 (61-64)Updating...
connected with : NaN
molecule tags Transcription
source organism Ehrlichia chaffeensis
publication title Structural characterization of a BolA protein (ECH_0303) from Ehrlichia chaffeensis, the agent responsible for human monocytotropic ehrlichiosis.
rcsb
molecule keywords BolA family protein
total genus 18
structure length 76
sequence length 76
ec nomenclature
pdb deposition date 2010-06-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01722 BolA BolA-like protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.300.90 Alpha Beta 2-Layer Sandwich GMP Synthetase; Chain A, domain 3 BolA-like 2kz0A01
2DHMA 1XS3A 2NCLA 3O2EA 4PUIA 4PUGA 2MCQA 1V60A 2KDNA 1NY8A 5LCIA 3TR3A 2KZ0A 2MMAB 2MM9A 4PUHA
chains in the Genus database with same CATH superfamily
3R9XA 3AY0A 1HNZC 4FUQA 4B3SC 4G37A 3A9UA 2D1TA 1JOSA 3E7XA 4LE5A 4X62C 5T8TA 2OO4A 4DV5C 4KHPC 3ETCA 3IEUA 2DPLA 2P2JA 4YHHC 1ML8A 3G7SA 3L95X 4LF5C 1ZB9A 3NPDA 1HH2P 4I9GA 4DV3C 1WCJA 2YWBA 2P2BA 3FCEA 4LF8C 1N2FA 1MDFA 3B7WA 4DR5C 1MD9A 2DYJA 5KYTA 4JI1C 3PROC 5K85A 2HJGA 4JI7C 2D28C 1V26A 5T8SA 4LFBC 4L7IA 3CQ3A 1RY2A 4DV1C 5KEIA 4WV3A 1IBMC 2YCBA 1XRBA 3TUFA 4DCVA 4DCUA 3DAYA 2OBVA 2V7BA 3L8CA 4DR6C 5BSUA 3CW8X 3GPCA 4LFAC 2KZFA 4JM1A 4DV0C 1MKYA 1BA3A 2Y4OA 3UX2A 2M5OA 5IWAC 3LGXA 3C5EA 5FLXD 4MH4A 4TPSB 1WH9A 4RLQA 2D1RA 5KYVA 3TQIA 3UOWA 2EGTA 2DHMA 2QL8A 2E0GA 1GPMA 1J5EC 1XNRC 2D1SA 2MCQA 2UU9C 4RVNA 2ONFA 2QW0X 2Y4NA 3DHVA 4JI2C 2UXDC 1NY8A 4GXQA 1N34C 2MM9A 1IBLC 3IMLA 4R1MA 1O93A 1QM4A 3UEBA 4K0KC 4FUTA 3CQ1A 5GTDA 4DUYC 1N32C 4IZ6A 5A19A 4BCAA 2E8FA 2PN2A 1PU1A 3LAXA 2P02A 5BURA 2PROA 2CU6A 4LF9C 3R9WA 5A2QD 1XNQC 3T1YC 1IBKC 4R0MA 4DV4C 4JYAC 4RLFA 2D27A 2CXCA 4RM3A 1XRAA 2E8EA 4DR2C 4LF6C 2XR1A 4PROC 4BC7A 3J80D 1HR0C 2NCLA 4L4QA 1FLOA 4D56A 4GKKC 3KXWA 4IR7A 4PUHA 1XMQC 3PBKA 4OYCA 4BSZA 3H2TA 2P20A 1P7LA 1TH5A 2WD9A 3GR1A 5BSWA 3I08A 1XHJA 3SO4A 4B3RC 2JMPA 2ZZNA 5E7QA 4JI4C 4MTNA 1V60A 2E7GA 2KZ0A 5BUSA 4DV6C 3T1HC 1V25A 5A1GA 3NYRA 1MXCA 4GXRA 3R44A 3CQ2A 1HNWC 3JAMD 4DUZC 2UUBC 4DR7C 4D4GA 4G1IA 2QVYX 1IB8A 3N54B 4KTVA 4DCTA 4BBYA 4B3MC 2KDNA 5BSTA 4U5YD 4KTTA 5BSVA 4NXNC 4JV5C 4NXMC 5BUQA 1WF3A 2QVZX 1USPA 3LUSA 4LF4C 1MXAA 5LMNC 1I94C 2WP0C 1YJ7A 4EATA 1L2FA 4HPVA 3A26A 1UKKA 1NYEA 1PG4A 1ULTA 1HNXC 1XS3A 2Y27A 4PHTA 5CZVA 4DV7C 3EQ6A 3GR0A 1T5DX 4ODJA 3K6RA 2E8CA 4JI8C 2M5HA 4NDNA 4X65C 3RV2A 1P4EC 2AYAA 1M6XC 3FCCA 4DV2C 1EGAA 4D57A 4WS9A 5CZXA 4DG8A 4D4IA 1N33C 3I07A 5IT9D 3VNSA 1N36C 4OXIA 2VQFC 3A9VA 4GKJC 3CJEA 1O90A 1USPB 2BJOA 1VLAA 2UXBC 4BC9A 1K0RA 2ZZMA 5JRHA 3NYQA 2PT7G 2CY1A 2E5LC 5AE3A 1T5HX 3IEVA 4GS5A 2ZM6C 1FUGA 4B3TC 5LMUC 3LNVA 1RG9A 4XX2A 3AF6A 1MDBA 5DV9A 1PG3A 5K8FA 5ADZA 3S82A 4K0BA 4JI5C 2VQEC 1KKGA 4G36A 5BR8C 4FTFA 5AE1A 3A4IA 5BSRA 4LF7C 4RMNA 3A25A 3J81D 3TDEA 4PUGA 3AF5A 4ISBA 3RG2A 4LFCC 1P4EA 5IFIA 2YX1A 1ZB8A 1M6XA 2D7VA 4DCSA 4L2ZA 3O2EA 3EERA 2JNVA 3N2QA 4X64C 4PZPA 4JI3C 5A1IA 4R1LA 1UWDA 4DR4C 2OPLA 3OTOC 4ZJZA 4ZLPA 1O92A 5AE2A 4PUIA 3NI2A 2YWCA 4JI0C 4DR3C 2BH1X 2P2FA 1LCIA 4I9FA 3UX3A 2QVXX 3VNQA 1LQLA 1PA4A 3VNRA 4YY3C 3LNOA 1MXBA 3GKUA 2VZEA 4OX9C 4RM2A 3PESA 4X66C 4AQYC 4DR1C 1FJGC 1XRCA 2UUCC 3UZ0A 4RVOA 2VSQA 2Z51A 1AMUA 2HHHC 3E7WA 2P2MA 2UUAC 4DG9A 2UXCC 3DLPX 2MMAB 2ATWA 2ASBA 5H9UA 4JI6C 2P2QA 3ETOA 1QWIA 1XMOC 5LCIA 2F4VC 1VEHA 3CW9A 3TR3A 2D1QA 5BSMA 4NOZA 3IPLA 2OPLB 1O9TA
chains in the Genus database with same CATH topology
2DHMA 1XS3A 2NCLA 3O2EA 4PUIA 4PUGA 2MCQA 1V60A 2KDNA 1NY8A 5LCIA 3TR3A 2KZ0A 2MMAB 2MM9A 4PUHA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2DHM A;  1XS3 A;  2NCL A;  3O2E A;  4PUI A;  4PUG A;  2MCQ A;  1V60 A;  2KDN A;  1NY8 A;  5LCI A;  3TR3 A;  2KZ0 A;  2MMA B;  2MM9 A;  4PUH A; 
#chains in the Genus database with same CATH topology
 3R9X A;  3AY0 A;  1HNZ C;  4FUQ A;  4B3S C;  4G37 A;  3A9U A;  2D1T A;  1JOS A;  3E7X A;  4LE5 A;  4X62 C;  5T8T A;  2OO4 A;  4DV5 C;  4KHP C;  3ETC A;  3IEU A;  2DPL A;  2P2J A;  4YHH C;  1ML8 A;  3G7S A;  3L95 X;  4LF5 C;  1ZB9 A;  3NPD A;  1HH2 P;  4I9G A;  4DV3 C;  1WCJ A;  2YWB A;  2P2B A;  3FCE A;  4LF8 C;  1N2F A;  1MDF A;  3B7W A;  4DR5 C;  1MD9 A;  2DYJ A;  5KYT A;  4JI1 C;  3PRO C;  5K85 A;  2HJG A;  4JI7 C;  2D28 C;  1V26 A;  5T8S A;  4LFB C;  4L7I A;  3CQ3 A;  1RY2 A;  4DV1 C;  5KEI A;  4WV3 A;  1IBM C;  2YCB A;  1XRB A;  3TUF A;  4DCV A;  4DCU A;  3DAY A;  2OBV A;  2V7B A;  3L8C A;  4DR6 C;  5BSU A;  3CW8 X;  3GPC A;  4LFA C;  2KZF A;  4JM1 A;  4DV0 C;  1MKY A;  1BA3 A;  2Y4O A;  3UX2 A;  2M5O A;  5IWA C;  3LGX A;  3C5E A;  5FLX D;  4MH4 A;  4TPS B;  1WH9 A;  4RLQ A;  2D1R A;  5KYV A;  3TQI A;  3UOW A;  2EGT A;  2DHM A;  2QL8 A;  2E0G A;  1GPM A;  1J5E C;  1XNR C;  2D1S A;  2MCQ A;  2UU9 C;  4RVN A;  2ONF A;  2QW0 X;  2Y4N A;  3DHV A;  4JI2 C;  2UXD C;  1NY8 A;  4GXQ A;  1N34 C;  2MM9 A;  1IBL C;  3IML A;  4R1M A;  1O93 A;  1QM4 A;  3UEB A;  4K0K C;  4FUT A;  3CQ1 A;  5GTD A;  4DUY C;  1N32 C;  4IZ6 A;  5A19 A;  4BCA A;  2E8F A;  2PN2 A;  1PU1 A;  3LAX A;  2P02 A;  5BUR A;  2PRO A;  2CU6 A;  4LF9 C;  3R9W A;  5A2Q D;  1XNQ C;  3T1Y C;  1IBK C;  4R0M A;  4DV4 C;  4JYA C;  4RLF A;  2D27 A;  2CXC A;  4RM3 A;  1XRA A;  2E8E A;  4DR2 C;  4LF6 C;  2XR1 A;  4PRO C;  4BC7 A;  3J80 D;  1HR0 C;  2NCL A;  4L4Q A;  1FLO A;  4D56 A;  4GKK C;  3KXW A;  4IR7 A;  4PUH A;  1XMQ C;  3PBK A;  4OYC A;  4BSZ A;  3H2T A;  2P20 A;  1P7L A;  1TH5 A;  2WD9 A;  3GR1 A;  5BSW A;  3I08 A;  1XHJ A;  3SO4 A;  4B3R C;  2JMP A;  2ZZN A;  5E7Q A;  4JI4 C;  4MTN A;  1V60 A;  2E7G A;  2KZ0 A;  5BUS A;  4DV6 C;  3T1H C;  1V25 A;  5A1G A;  3NYR A;  1MXC A;  4GXR A;  3R44 A;  3CQ2 A;  1HNW C;  3JAM D;  4DUZ C;  2UUB C;  4DR7 C;  4D4G A;  4G1I A;  2QVY X;  1IB8 A;  3N54 B;  4KTV A;  4DCT A;  4BBY A;  4B3M C;  2KDN A;  5BST A;  4U5Y D;  4KTT A;  5BSV A;  4NXN C;  4JV5 C;  4NXM C;  5BUQ A;  1WF3 A;  2QVZ X;  1USP A;  3LUS A;  4LF4 C;  1MXA A;  5LMN C;  1I94 C;  2WP0 C;  1YJ7 A;  4EAT A;  1L2F A;  4HPV A;  3A26 A;  1UKK A;  1NYE A;  1PG4 A;  1ULT A;  1HNX C;  1XS3 A;  2Y27 A;  4PHT A;  5CZV A;  4DV7 C;  3EQ6 A;  3GR0 A;  1T5D X;  4ODJ A;  3K6R A;  2E8C A;  4JI8 C;  2M5H A;  4NDN A;  4X65 C;  3RV2 A;  1P4E C;  2AYA A;  1M6X C;  3FCC A;  4DV2 C;  1EGA A;  4D57 A;  4WS9 A;  5CZX A;  4DG8 A;  4D4I A;  1N33 C;  3I07 A;  5IT9 D;  3VNS A;  1N36 C;  4OXI A;  2VQF C;  3A9V A;  4GKJ C;  3CJE A;  1O90 A;  1USP B;  2BJO A;  1VLA A;  2UXB C;  4BC9 A;  1K0R A;  2ZZM A;  5JRH A;  3NYQ A;  2PT7 G;  2CY1 A;  2E5L C;  5AE3 A;  1T5H X;  3IEV A;  4GS5 A;  2ZM6 C;  1FUG A;  4B3T C;  5LMU C;  3LNV A;  1RG9 A;  4XX2 A;  3AF6 A;  1MDB A;  5DV9 A;  1PG3 A;  5K8F A;  5ADZ A;  3S82 A;  4K0B A;  4JI5 C;  2VQE C;  1KKG A;  4G36 A;  5BR8 C;  4FTF A;  5AE1 A;  3A4I A;  5BSR A;  4LF7 C;  4RMN A;  3A25 A;  3J81 D;  3TDE A;  4PUG A;  3AF5 A;  4ISB A;  3RG2 A;  4LFC C;  1P4E A;  5IFI A;  2YX1 A;  1ZB8 A;  1M6X A;  2D7V A;  4DCS A;  4L2Z A;  3O2E A;  3EER A;  2JNV A;  3N2Q A;  4X64 C;  4PZP A;  4JI3 C;  5A1I A;  4R1L A;  1UWD A;  4DR4 C;  2OPL A;  3OTO C;  4ZJZ A;  4ZLP A;  1O92 A;  5AE2 A;  4PUI A;  3NI2 A;  2YWC A;  4JI0 C;  4DR3 C;  2BH1 X;  2P2F A;  1LCI A;  4I9F A;  3UX3 A;  2QVX X;  3VNQ A;  1LQL A;  1PA4 A;  3VNR A;  4YY3 C;  3LNO A;  1MXB A;  3GKU A;  2VZE A;  4OX9 C;  4RM2 A;  3PES A;  4X66 C;  4AQY C;  4DR1 C;  1FJG C;  1XRC A;  2UUC C;  3UZ0 A;  4RVO A;  2VSQ A;  2Z51 A;  1AMU A;  2HHH C;  3E7W A;  2P2M A;  2UUA C;  4DG9 A;  2UXC C;  3DLP X;  2MMA B;  2ATW A;  2ASB A;  5H9U A;  4JI6 C;  2P2Q A;  3ETO A;  1QWI A;  1XMO C;  5LCI A;  2F4V C;  1VEH A;  3CW9 A;  3TR3 A;  2D1Q A;  5BSM A;  4NOZ A;  3IPL A;  2OPL B;  1O9T A; 
#chains in the Genus database with same CATH homology
 2DHM A;  1XS3 A;  2NCL A;  3O2E A;  4PUI A;  4PUG A;  2MCQ A;  1V60 A;  2KDN A;  1NY8 A;  5LCI A;  3TR3 A;  2KZ0 A;  2MMA B;  2MM9 A;  4PUH A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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