2KZ0A

Solution structure of a bola protein (ech_0303) from ehrlichia chaffeensis. seattle structural genomics center for infectious disease target ehcha.10365.a
Total Genus 18
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
18
sequence length
76
structure length
76
Chain Sequence
PGSMTVTQSQLELLIRNAFPEAEITVTSLVGDNNHYSIKVISSQFQGKSKLEQHRMIYKVLDGLNIHAIQIQTGCK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural characterization of a BolA protein (ECH_0303) from Ehrlichia chaffeensis, the agent responsible for human monocytotropic ehrlichiosis.
rcsb
molecule tags Transcription
source organism Ehrlichia chaffeensis
molecule keywords BolA family protein
total genus 18
structure length 76
sequence length 76
ec nomenclature
pdb deposition date 2010-06-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01722 BolA BolA-like protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.300.90 Alpha Beta 2-Layer Sandwich GMP Synthetase; Chain A, domain 3 BolA-like 2kz0A01
4PUGA 1NY8A 4PUIA 3TR3A 2KZ0A 2MM9A 5LCIA 3O2EA 2MCQA 2MMAB 2KDNA 1V60A 4PUHA 2NCLA 1XS3A 2DHMA
chains in the Genus database with same CATH superfamily
3DHVA 3NYRA 4BSZA 4HPVA 4K0BA 2BJOA 4YHHC 2NCLA 2OPLB 2V7BA 5KEIA 5BURA 3RV2A 5LMNC 2YWBA 2P2FA 2ZM6C 2DHMA 4BC9A 3GKUA 4U5YD 4DUZC 4RM2A 3J81D 4KTVA 1XNQC 1GPMA 3FCCA 3IMLA 2YWCA 4FUQA 4LFAC 4G36A 4WS9A 4LF8C 1XS3A 5KYVA 3AY0A 4PZPA 2D7VA 4FTFA 2OPLA 1V60A 2ZZMA 1O90A 3LAXA 2M5OA 5T8TA 2P2JA 1P4EC 2UU9C 4KHPC 2D1SA 1XRAA 1TH5A 4DCSA 2HHHC 3NYQA 1MDFA 2KZ0A 2D28C 3PESA 2PN2A 4DCVA 3UZ0A 1N2FA 2P2QA 2YX1A 4JI1C 4B3SC 1HH2P 4DV2C 2D1TA 4WV3A 5BSMA 3RG2A 1ML8A 3CW9A 4RVNA 4LF5C 5LCIA 3R44A 3K6RA 3R9WA 2MM9A 3I08A 3B7WA 1HR0C 3A25A 4RLQA 3H2TA 1O9TA 3N54B 4LF4C 3T1YC 5CZVA 2D1QA 4X62C 4G37A 2ONFA 4JI0C 2KDNA 5A1GA 4JI5C 1XMOC 3GPCA 3PROC 1P4EA 4DR2C 2E8EA 4JV5C 5BSTA 2PROA 4X64C 2VZEA 1J5EC 4EATA 1PA4A 3L95X 1WH9A 4D56A 2ZZNA 2E0GA 4DUYC 1QWIA 4DCUA 3O2EA 1XRBA 3AF5A 1ZB8A 2D1RA 4ZJZA 4DR1C 4ISBA 4JI7C 3GR0A 4FUTA 5GTDA 2F4VC 1K0RA 1MKYA 2QL8A 4DV0C 1M6XC 4I9GA 2Y27A 1N36C 1QM4A 2UXBC 4K0KC 1NY8A 3J80D 3E7WA 2JMPA 2P20A 3C5EA 4L2ZA 4X65C 1MD9A 1O92A 3TDEA 5BSVA 3DLPX 4DG9A 2CY1A 4TPSB 4OXIA 2CU6A 4DG8A 3IPLA 4DV3C 1MXBA 3TR3A 3UOWA 1LCIA 4DV5C 4ZLPA 5H9UA 1N34C 4BBYA 3A9UA 4OX9C 3TQIA 2ATWA 2MCQA 4GKKC 3CQ2A 1KKGA 4D4IA 1HNXC 3UX3A 1L2FA 5LMUC 5BUSA 1V26A 4D57A 1XHJA 2DPLA 1XMQC 2E8CA 1N33C 4YY3C 4GS5A 4IR7A 2MMAB 4JI3C 3VNQA 3R9XA 4DR3C 4RLFA 2WD9A 1N32C 3LGXA 4RM3A 2UXCC 5CZXA 4JYAC 1M6XA 5BR8C 4RVOA 2ASBA 2QVZX 3LNOA 4X66C 1VEHA 3OTOC 1HNWC 4LFBC 4XX2A 4GXRA 1IBMC 2UUBC 3GR1A 5A2QD 3VNSA 1USPB 2PT7G 4NXMC 2Y4OA 1O93A 5FLXD 1XRCA 3PBKA 2E7GA 3IEVA 1ZB9A 1MDBA 2BH1X 1IBLC 4JI8C 3UEBA 3NPDA 5DV9A 4LF7C 3NI2A 4NXNC 5BUQA 5JRHA 3I07A 4KTTA 4PROC 5BSWA 3CQ1A 4R0MA 2P02A 3ETCA 4DR7C 1VLAA 2Z51A 1BA3A 4DV1C 2E5LC 2OBVA 1AMUA 4DV4C 2P2BA 3TUFA 1UWDA 4PUIA 3A9VA 1USPA 3S82A 3T1HC 1FLOA 3CJEA 4JM1A 4PHTA 2DYJA 3A26A 2WP0C 3JAMD 4L4QA 2VQFC 5AE2A 3A4IA 1WF3A 4IZ6A 1ULTA 4DR4C 1YJ7A 2KZFA 3UX2A 4GXQA 3FCEA 4DR6C 4JI2C 2OO4A 1RY2A 4G1IA 2VQEC 1PU1A 4AQYC 1LQLA 2M5HA 5IT9D 2EGTA 4LFCC 4RMNA 5IWAC 3LUSA 2YCBA 3AF6A 4OYCA 3CW8X 1I94C 5A1IA 5ADZA 1IB8A 3N2QA 4DV6C 1WCJA 2VSQA 4B3RC 4B3TC 2HJGA 2AYAA 1PG4A 5KYTA 2UUAC 5K85A 1V25A 2UUCC 3SO4A 1IBKC 4I9FA 1FJGC 1P7LA 4NDNA 2UXDC 1JOSA 1MXAA 2Y4NA 1EGAA 3L8CA 4R1MA 2CXCA 4LE5A 4ODJA 4GKJC 1PG3A 1XNRC 1UKKA 3EQ6A 4DCTA 1T5HX 4DV7C 4R1LA 4MTNA 3DAYA 3VNRA 5AE1A 4D4GA 1HNZC 4LF9C 4B3MC 5A19A 4DR5C 1MXCA 3IEUA 4MH4A 3G7SA 5K8FA 5AE3A 2XR1A 1RG9A 1T5DX 4BCAA 2E8FA 3KXWA 4JI6C 2QVYX 1NYEA 4NOZA 4LF6C 3ETOA 5BSRA 2D27A 5BSUA 2QW0X 4PUGA 2QVXX 5IFIA 5E7QA 3LNVA 1FUGA 4L7IA 3CQ3A 2P2MA 2JNVA 3EERA 4BC7A 3E7XA 4JI4C 4PUHA 5T8SA
chains in the Genus database with same CATH topology
4PUGA 1NY8A 4PUIA 3TR3A 2KZ0A 2MM9A 5LCIA 3O2EA 2MCQA 2MMAB 2KDNA 1V60A 4PUHA 2NCLA 1XS3A 2DHMA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4PUG A;  1NY8 A;  4PUI A;  3TR3 A;  2KZ0 A;  2MM9 A;  5LCI A;  3O2E A;  2MCQ A;  2MMA B;  2KDN A;  1V60 A;  4PUH A;  2NCL A;  1XS3 A;  2DHM A; 
#chains in the Genus database with same CATH topology
 3DHV A;  3NYR A;  4BSZ A;  4HPV A;  4K0B A;  2BJO A;  4YHH C;  2NCL A;  2OPL B;  2V7B A;  5KEI A;  5BUR A;  3RV2 A;  5LMN C;  2YWB A;  2P2F A;  2ZM6 C;  2DHM A;  4BC9 A;  3GKU A;  4U5Y D;  4DUZ C;  4RM2 A;  3J81 D;  4KTV A;  1XNQ C;  1GPM A;  3FCC A;  3IML A;  2YWC A;  4FUQ A;  4LFA C;  4G36 A;  4WS9 A;  4LF8 C;  1XS3 A;  5KYV A;  3AY0 A;  4PZP A;  2D7V A;  4FTF A;  2OPL A;  1V60 A;  2ZZM A;  1O90 A;  3LAX A;  2M5O A;  5T8T A;  2P2J A;  1P4E C;  2UU9 C;  4KHP C;  2D1S A;  1XRA A;  1TH5 A;  4DCS A;  2HHH C;  3NYQ A;  1MDF A;  2KZ0 A;  2D28 C;  3PES A;  2PN2 A;  4DCV A;  3UZ0 A;  1N2F A;  2P2Q A;  2YX1 A;  4JI1 C;  4B3S C;  1HH2 P;  4DV2 C;  2D1T A;  4WV3 A;  5BSM A;  3RG2 A;  1ML8 A;  3CW9 A;  4RVN A;  4LF5 C;  5LCI A;  3R44 A;  3K6R A;  3R9W A;  2MM9 A;  3I08 A;  3B7W A;  1HR0 C;  3A25 A;  4RLQ A;  3H2T A;  1O9T A;  3N54 B;  4LF4 C;  3T1Y C;  5CZV A;  2D1Q A;  4X62 C;  4G37 A;  2ONF A;  4JI0 C;  2KDN A;  5A1G A;  4JI5 C;  1XMO C;  3GPC A;  3PRO C;  1P4E A;  4DR2 C;  2E8E A;  4JV5 C;  5BST A;  2PRO A;  4X64 C;  2VZE A;  1J5E C;  4EAT A;  1PA4 A;  3L95 X;  1WH9 A;  4D56 A;  2ZZN A;  2E0G A;  4DUY C;  1QWI A;  4DCU A;  3O2E A;  1XRB A;  3AF5 A;  1ZB8 A;  2D1R A;  4ZJZ A;  4DR1 C;  4ISB A;  4JI7 C;  3GR0 A;  4FUT A;  5GTD A;  2F4V C;  1K0R A;  1MKY A;  2QL8 A;  4DV0 C;  1M6X C;  4I9G A;  2Y27 A;  1N36 C;  1QM4 A;  2UXB C;  4K0K C;  1NY8 A;  3J80 D;  3E7W A;  2JMP A;  2P20 A;  3C5E A;  4L2Z A;  4X65 C;  1MD9 A;  1O92 A;  3TDE A;  5BSV A;  3DLP X;  4DG9 A;  2CY1 A;  4TPS B;  4OXI A;  2CU6 A;  4DG8 A;  3IPL A;  4DV3 C;  1MXB A;  3TR3 A;  3UOW A;  1LCI A;  4DV5 C;  4ZLP A;  5H9U A;  1N34 C;  4BBY A;  3A9U A;  4OX9 C;  3TQI A;  2ATW A;  2MCQ A;  4GKK C;  3CQ2 A;  1KKG A;  4D4I A;  1HNX C;  3UX3 A;  1L2F A;  5LMU C;  5BUS A;  1V26 A;  4D57 A;  1XHJ A;  2DPL A;  1XMQ C;  2E8C A;  1N33 C;  4YY3 C;  4GS5 A;  4IR7 A;  2MMA B;  4JI3 C;  3VNQ A;  3R9X A;  4DR3 C;  4RLF A;  2WD9 A;  1N32 C;  3LGX A;  4RM3 A;  2UXC C;  5CZX A;  4JYA C;  1M6X A;  5BR8 C;  4RVO A;  2ASB A;  2QVZ X;  3LNO A;  4X66 C;  1VEH A;  3OTO C;  1HNW C;  4LFB C;  4XX2 A;  4GXR A;  1IBM C;  2UUB C;  3GR1 A;  5A2Q D;  3VNS A;  1USP B;  2PT7 G;  4NXM C;  2Y4O A;  1O93 A;  5FLX D;  1XRC A;  3PBK A;  2E7G A;  3IEV A;  1ZB9 A;  1MDB A;  2BH1 X;  1IBL C;  4JI8 C;  3UEB A;  3NPD A;  5DV9 A;  4LF7 C;  3NI2 A;  4NXN C;  5BUQ A;  5JRH A;  3I07 A;  4KTT A;  4PRO C;  5BSW A;  3CQ1 A;  4R0M A;  2P02 A;  3ETC A;  4DR7 C;  1VLA A;  2Z51 A;  1BA3 A;  4DV1 C;  2E5L C;  2OBV A;  1AMU A;  4DV4 C;  2P2B A;  3TUF A;  1UWD A;  4PUI A;  3A9V A;  1USP A;  3S82 A;  3T1H C;  1FLO A;  3CJE A;  4JM1 A;  4PHT A;  2DYJ A;  3A26 A;  2WP0 C;  3JAM D;  4L4Q A;  2VQF C;  5AE2 A;  3A4I A;  1WF3 A;  4IZ6 A;  1ULT A;  4DR4 C;  1YJ7 A;  2KZF A;  3UX2 A;  4GXQ A;  3FCE A;  4DR6 C;  4JI2 C;  2OO4 A;  1RY2 A;  4G1I A;  2VQE C;  1PU1 A;  4AQY C;  1LQL A;  2M5H A;  5IT9 D;  2EGT A;  4LFC C;  4RMN A;  5IWA C;  3LUS A;  2YCB A;  3AF6 A;  4OYC A;  3CW8 X;  1I94 C;  5A1I A;  5ADZ A;  1IB8 A;  3N2Q A;  4DV6 C;  1WCJ A;  2VSQ A;  4B3R C;  4B3T C;  2HJG A;  2AYA A;  1PG4 A;  5KYT A;  2UUA C;  5K85 A;  1V25 A;  2UUC C;  3SO4 A;  1IBK C;  4I9F A;  1FJG C;  1P7L A;  4NDN A;  2UXD C;  1JOS A;  1MXA A;  2Y4N A;  1EGA A;  3L8C A;  4R1M A;  2CXC A;  4LE5 A;  4ODJ A;  4GKJ C;  1PG3 A;  1XNR C;  1UKK A;  3EQ6 A;  4DCT A;  1T5H X;  4DV7 C;  4R1L A;  4MTN A;  3DAY A;  3VNR A;  5AE1 A;  4D4G A;  1HNZ C;  4LF9 C;  4B3M C;  5A19 A;  4DR5 C;  1MXC A;  3IEU A;  4MH4 A;  3G7S A;  5K8F A;  5AE3 A;  2XR1 A;  1RG9 A;  1T5D X;  4BCA A;  2E8F A;  3KXW A;  4JI6 C;  2QVY X;  1NYE A;  4NOZ A;  4LF6 C;  3ETO A;  5BSR A;  2D27 A;  5BSU A;  2QW0 X;  4PUG A;  2QVX X;  5IFI A;  5E7Q A;  3LNV A;  1FUG A;  4L7I A;  3CQ3 A;  2P2M A;  2JNV A;  3EER A;  4BC7 A;  3E7X A;  4JI4 C;  4PUH A;  5T8S A; 
#chains in the Genus database with same CATH homology
 4PUG A;  1NY8 A;  4PUI A;  3TR3 A;  2KZ0 A;  2MM9 A;  5LCI A;  3O2E A;  2MCQ A;  2MMA B;  2KDN A;  1V60 A;  4PUH A;  2NCL A;  1XS3 A;  2DHM A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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