3CQ3A

Structure of the dtdp-4-keto-l-rhamnose reductase related protein (other form) from thermus thermophilus hb8
Total Genus 24
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
24
sequence length
98
structure length
98
Chain Sequence
NPLEAQAWALLEAVYDPELGLDVVNLGLIYDLVVEPPRAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVTFEPPWTLARLSEKARRLLGW
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase
source organism Thermus thermophilus
publication title Structure of the DTDP-4-Keto-L-Rhamnose Reductase related protein (other form) from Thermus Thermophilus HB8
rcsb
molecule keywords Putative uncharacterized protein TTHB138
total genus 24
structure length 98
sequence length 98
chains with identical sequence B, C, D, E
ec nomenclature
pdb deposition date 2008-04-02

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01883 FeS_assembly_P Iron-sulfur cluster assembly protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.300.130 Alpha Beta 2-Layer Sandwich GMP Synthetase; Chain A, domain 3 Fe-S cluster assembly (FSCA) 3cq3A00
2CU6A 3CQ2A 3LNOA 1UWDA 2JNVA 2M5HA 2Z51A 2M5OA 1WCJA 3UX2A 1XHJA 1TH5A 1VEHA 3CQ3A 3UX3A 3CQ1A
chains in the Genus database with same CATH superfamily
1V60A 4EATA 2OO4A 2P2QA 1NYEA 4D56A 3H2TA 2YWBA 4R1MA 3NYQA 1VLAA 3I08A 1JOSA 3ETOA 4NDNA 5BSMA 1HR0C 2VQFC 4DCVA 4JM1A 3LGXA 1O90A 1ZB9A 1M6XA 4GS5A 3UOWA 2CXCA 4DV5C 2VSQA 1QM4A 1WF3A 2NCLA 1MXAA 4PZPA 4JI6C 5BSVA 4TPSB 5KYVA 1N33C 3I07A 1MD9A 2MCQA 3A9VA 4ZJZA 4JI1C 1NY8A 2P2BA 4BSZA 1RY2A 1XHJA 4PHTA 3CQ2A 2ONFA 2D27A 4DR2C 5BSRA 5A1GA 3T1YC 2MM9A 4L2ZA 4ISBA 1LQLA 1XS3A 4LF5C 5E7QA 2VQEC 1J5EC 2UUCC 4JI2C 4X65C 3PESA 2UUAC 2EGTA 4MH4A 4LE5A 2ASBA 4FTFA 3JAMD 3NI2A 2OPLB 4DV1C 1P7LA 3A25A 3J80D 2CY1A 3CJEA 4I9FA 2XR1A 1XRBA 5A2QD 2P2FA 1LCIA 4FUTA 4KHPC 3VNQA 5BSUA 4PUIA 3EERA 2WP0C 2YWCA 1FUGA 4HPVA 2KZFA 3IPLA 4X66C 1ML8A 4JI7C 4DG8A 2Y4OA 3AY0A 2OBVA 1MXBA 3FCEA 5FLXD 4DV2C 4MTNA 4BC9A 5AE3A 4FUQA 1HH2P 2HJGA 5AE1A 3N54B 1XMQC 3K6RA 5K85A 3EQ6A 1HNXC 3FCCA 3L95X 4RVOA 4ZLPA 4KTVA 3DHVA 3DAYA 4XX2A 3UEBA 1ULTA 3GPCA 3LNOA 4X64C 1O92A 2P2MA 3CW8X 3L8CA 1GPMA 4K0KC 2D1QA 3KXWA 4I9GA 1HNWC 4DR5C 5BUSA 1USPB 2KDNA 3TR3A 2YCBA 4DCUA 4JI8C 2E5LC 4G36A 5CZVA 1YJ7A 5IT9D 1PG3A 4BC7A 4DR4C 2E7GA 2PN2A 4JI5C 4PROC 4GKJC 4JI0C 1PA4A 4PUHA 5JRHA 4YY3C 4LF6C 4ODJA 5T8TA 5AE2A 1V26A 3J81D 2HHHC 2AYAA 3GR0A 2QW0X 1TH5A 5LMNC 3AF6A 4OXIA 1N34C 3A9UA 4B3MC 1T5DX 3LNVA 4BCAA 4OX9C 2UU9C 4NOZA 1KKGA 2DPLA 4D57A 4OYCA 3RV2A 3UZ0A 1HNZC 4LF4C 4G1IA 4R1LA 3O2EA 4RLFA 4LF8C 1XRCA 2E8CA 3R44A 3TQIA 4IZ6A 4IR7A 5A1IA 1RG9A 4B3TC 4DV4C 1IBKC 3T1HC 2D28C 3N2QA 3GKUA 4NXNC 4LFBC 2V7BA 1MKYA 5H9UA 1MDBA 2Z51A 5A19A 2BH1X 1FLOA 2P2JA 1XMOC 4AQYC 3TUFA 5BR8C 2P20A 3LUSA 1XNQC 4GXQA 3S82A 5K8FA 1PG4A 1IBLC 2JNVA 3DLPX 2OPLA 3CQ3A 3NPDA 2D7VA 3IEUA 1IB8A 3IEVA 3B7WA 1EGAA 3LAXA 1XRAA 3C5EA 2VZEA 5KEIA 5GTDA 1FJGC 3E7XA 4RLQA 3NYRA 5LMUC 2ZZMA 1UWDA 4DV7C 2MMAB 1MDFA 3OTOC 1MXCA 4DCSA 2UUBC 4DUYC 2DYJA 2Y27A 2QVZX 2QVYX 4WS9A 4JI4C 1QWIA 1BA3A 2YX1A 3CQ1A 2CU6A 5BUQA 5IFIA 3R9WA 4LFAC 4DV0C 1VEHA 5LCIA 2BJOA 1K0RA 4D4GA 2M5OA 3A4IA 3AF5A 1IBMC 2Y4NA 4YHHC 1XNRC 4DV6C 4RM3A 2D1RA 2ATWA 4WV3A 2QL8A 2JMPA 4JV5C 1N36C 2UXCC 3VNRA 4RM2A 4DR1C 1M6XC 5CZXA 4GXRA 3SO4A 3UX3A 4U5YD 1ZB8A 1L2FA 4DCTA 2PROA 2ZZNA 1N2FA 2M5HA 5DV9A 3R9XA 4JYAC 2QVXX 2ZM6C 4B3SC 1USPA 4LF7C 3CW9A 3GR1A 4RMNA 4RVNA 2E0GA 4G37A 1WCJA 4DG9A 1N32C 3IMLA 1I94C 2E8FA 4BBYA 4GKKC 3UX2A 4DR6C 4L4QA 5BSTA 1UKKA 2F4VC 3E7WA 5BSWA 3PBKA 2WD9A 2D1SA 4L7IA 5T8SA 4LFCC 1T5HX 2UXDC 4PUGA 2E8EA 3PROC 5IWAC 2UXBC 1P4EA 1O9TA 4DV3C 4DR3C 3RG2A 4DUZC 4R0MA 4B3RC 2PT7G 4D4IA 5KYTA 4DR7C 4JI3C 3A26A 3TDEA 1PU1A 2KZ0A 4K0BA 2D1TA 2P02A 3VNSA 4X62C 4KTTA 5BURA 1P4EC 3ETCA 4LF9C 1O93A 5ADZA 3G7SA 2DHMA 1WH9A 1AMUA 1V25A 4NXMC
chains in the Genus database with same CATH topology
2CU6A 3CQ2A 3LNOA 1UWDA 2JNVA 2M5HA 2Z51A 2M5OA 1WCJA 3UX2A 1XHJA 1TH5A 1VEHA 3CQ3A 3UX3A 3CQ1A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2CU6 A;  3CQ2 A;  3LNO A;  1UWD A;  2JNV A;  2M5H A;  2Z51 A;  2M5O A;  1WCJ A;  3UX2 A;  1XHJ A;  1TH5 A;  1VEH A;  3CQ3 A;  3UX3 A;  3CQ1 A; 
#chains in the Genus database with same CATH topology
 1V60 A;  4EAT A;  2OO4 A;  2P2Q A;  1NYE A;  4D56 A;  3H2T A;  2YWB A;  4R1M A;  3NYQ A;  1VLA A;  3I08 A;  1JOS A;  3ETO A;  4NDN A;  5BSM A;  1HR0 C;  2VQF C;  4DCV A;  4JM1 A;  3LGX A;  1O90 A;  1ZB9 A;  1M6X A;  4GS5 A;  3UOW A;  2CXC A;  4DV5 C;  2VSQ A;  1QM4 A;  1WF3 A;  2NCL A;  1MXA A;  4PZP A;  4JI6 C;  5BSV A;  4TPS B;  5KYV A;  1N33 C;  3I07 A;  1MD9 A;  2MCQ A;  3A9V A;  4ZJZ A;  4JI1 C;  1NY8 A;  2P2B A;  4BSZ A;  1RY2 A;  1XHJ A;  4PHT A;  3CQ2 A;  2ONF A;  2D27 A;  4DR2 C;  5BSR A;  5A1G A;  3T1Y C;  2MM9 A;  4L2Z A;  4ISB A;  1LQL A;  1XS3 A;  4LF5 C;  5E7Q A;  2VQE C;  1J5E C;  2UUC C;  4JI2 C;  4X65 C;  3PES A;  2UUA C;  2EGT A;  4MH4 A;  4LE5 A;  2ASB A;  4FTF A;  3JAM D;  3NI2 A;  2OPL B;  4DV1 C;  1P7L A;  3A25 A;  3J80 D;  2CY1 A;  3CJE A;  4I9F A;  2XR1 A;  1XRB A;  5A2Q D;  2P2F A;  1LCI A;  4FUT A;  4KHP C;  3VNQ A;  5BSU A;  4PUI A;  3EER A;  2WP0 C;  2YWC A;  1FUG A;  4HPV A;  2KZF A;  3IPL A;  4X66 C;  1ML8 A;  4JI7 C;  4DG8 A;  2Y4O A;  3AY0 A;  2OBV A;  1MXB A;  3FCE A;  5FLX D;  4DV2 C;  4MTN A;  4BC9 A;  5AE3 A;  4FUQ A;  1HH2 P;  2HJG A;  5AE1 A;  3N54 B;  1XMQ C;  3K6R A;  5K85 A;  3EQ6 A;  1HNX C;  3FCC A;  3L95 X;  4RVO A;  4ZLP A;  4KTV A;  3DHV A;  3DAY A;  4XX2 A;  3UEB A;  1ULT A;  3GPC A;  3LNO A;  4X64 C;  1O92 A;  2P2M A;  3CW8 X;  3L8C A;  1GPM A;  4K0K C;  2D1Q A;  3KXW A;  4I9G A;  1HNW C;  4DR5 C;  5BUS A;  1USP B;  2KDN A;  3TR3 A;  2YCB A;  4DCU A;  4JI8 C;  2E5L C;  4G36 A;  5CZV A;  1YJ7 A;  5IT9 D;  1PG3 A;  4BC7 A;  4DR4 C;  2E7G A;  2PN2 A;  4JI5 C;  4PRO C;  4GKJ C;  4JI0 C;  1PA4 A;  4PUH A;  5JRH A;  4YY3 C;  4LF6 C;  4ODJ A;  5T8T A;  5AE2 A;  1V26 A;  3J81 D;  2HHH C;  2AYA A;  3GR0 A;  2QW0 X;  1TH5 A;  5LMN C;  3AF6 A;  4OXI A;  1N34 C;  3A9U A;  4B3M C;  1T5D X;  3LNV A;  4BCA A;  4OX9 C;  2UU9 C;  4NOZ A;  1KKG A;  2DPL A;  4D57 A;  4OYC A;  3RV2 A;  3UZ0 A;  1HNZ C;  4LF4 C;  4G1I A;  4R1L A;  3O2E A;  4RLF A;  4LF8 C;  1XRC A;  2E8C A;  3R44 A;  3TQI A;  4IZ6 A;  4IR7 A;  5A1I A;  1RG9 A;  4B3T C;  4DV4 C;  1IBK C;  3T1H C;  2D28 C;  3N2Q A;  3GKU A;  4NXN C;  4LFB C;  2V7B A;  1MKY A;  5H9U A;  1MDB A;  2Z51 A;  5A19 A;  2BH1 X;  1FLO A;  2P2J A;  1XMO C;  4AQY C;  3TUF A;  5BR8 C;  2P20 A;  3LUS A;  1XNQ C;  4GXQ A;  3S82 A;  5K8F A;  1PG4 A;  1IBL C;  2JNV A;  3DLP X;  2OPL A;  3CQ3 A;  3NPD A;  2D7V A;  3IEU A;  1IB8 A;  3IEV A;  3B7W A;  1EGA A;  3LAX A;  1XRA A;  3C5E A;  2VZE A;  5KEI A;  5GTD A;  1FJG C;  3E7X A;  4RLQ A;  3NYR A;  5LMU C;  2ZZM A;  1UWD A;  4DV7 C;  2MMA B;  1MDF A;  3OTO C;  1MXC A;  4DCS A;  2UUB C;  4DUY C;  2DYJ A;  2Y27 A;  2QVZ X;  2QVY X;  4WS9 A;  4JI4 C;  1QWI A;  1BA3 A;  2YX1 A;  3CQ1 A;  2CU6 A;  5BUQ A;  5IFI A;  3R9W A;  4LFA C;  4DV0 C;  1VEH A;  5LCI A;  2BJO A;  1K0R A;  4D4G A;  2M5O A;  3A4I A;  3AF5 A;  1IBM C;  2Y4N A;  4YHH C;  1XNR C;  4DV6 C;  4RM3 A;  2D1R A;  2ATW A;  4WV3 A;  2QL8 A;  2JMP A;  4JV5 C;  1N36 C;  2UXC C;  3VNR A;  4RM2 A;  4DR1 C;  1M6X C;  5CZX A;  4GXR A;  3SO4 A;  3UX3 A;  4U5Y D;  1ZB8 A;  1L2F A;  4DCT A;  2PRO A;  2ZZN A;  1N2F A;  2M5H A;  5DV9 A;  3R9X A;  4JYA C;  2QVX X;  2ZM6 C;  4B3S C;  1USP A;  4LF7 C;  3CW9 A;  3GR1 A;  4RMN A;  4RVN A;  2E0G A;  4G37 A;  1WCJ A;  4DG9 A;  1N32 C;  3IML A;  1I94 C;  2E8F A;  4BBY A;  4GKK C;  3UX2 A;  4DR6 C;  4L4Q A;  5BST A;  1UKK A;  2F4V C;  3E7W A;  5BSW A;  3PBK A;  2WD9 A;  2D1S A;  4L7I A;  5T8S A;  4LFC C;  1T5H X;  2UXD C;  4PUG A;  2E8E A;  3PRO C;  5IWA C;  2UXB C;  1P4E A;  1O9T A;  4DV3 C;  4DR3 C;  3RG2 A;  4DUZ C;  4R0M A;  4B3R C;  2PT7 G;  4D4I A;  5KYT A;  4DR7 C;  4JI3 C;  3A26 A;  3TDE A;  1PU1 A;  2KZ0 A;  4K0B A;  2D1T A;  2P02 A;  3VNS A;  4X62 C;  4KTT A;  5BUR A;  1P4E C;  3ETC A;  4LF9 C;  1O93 A;  5ADZ A;  3G7S A;  2DHM A;  1WH9 A;  1AMU A;  1V25 A;  4NXM C; 
#chains in the Genus database with same CATH homology
 2CU6 A;  3CQ2 A;  3LNO A;  1UWD A;  2JNV A;  2M5H A;  2Z51 A;  2M5O A;  1WCJ A;  3UX2 A;  1XHJ A;  1TH5 A;  1VEH A;  3CQ3 A;  3UX3 A;  3CQ1 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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