3TR3A

Structure of a bola protein homologue from coxiella burnetii
Total Genus 23
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
23
sequence length
78
structure length
78
Chain Sequence
MVTTHDIKQWIETGLSESRVISAEGDGHHFEAVVLCPTFEGQTALTRHRLVYNALGSHMQSDIHALSLKTYTPDEYER
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords BolA
publication title Structural genomics for drug design against the pathogen Coxiella burnetii.
pubmed doi rcsb
source organism Coxiella burnetii
molecule tags Unknown function
total genus 23
structure length 78
sequence length 78
chains with identical sequence B
ec nomenclature
pdb deposition date 2011-09-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01722 BolA BolA-like protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.300.90 Alpha Beta 2-Layer Sandwich GMP Synthetase; Chain A, domain 3 BolA-like 3tr3A00
2KZ0A 2MCQA 4PUIA 1XS3A 2MM9A 4PUGA 1NY8A 4PUHA 2NCLA 2KDNA 5LCIA 3O2EA 3TR3A 2MMAB 2DHMA 1V60A
chains in the Genus database with same CATH superfamily
4X62C 4FUQA 1XRBA 2NCLA 3SO4A 5AE3A 5A1GA 1VEHA 3GPCA 4YHHC 3H2TA 2V7BA 3A4IA 4NOZA 4DV1C 4FTFA 1IB8A 1L2FA 4X65C 3AF5A 4NXNC 3AY0A 3ETCA 3DLPX 2E8CA 3CW9A 4OYCA 5GTDA 1WF3A 1V25A 1MXBA 1XMOC 1ULTA 2MCQA 4DCSA 2M5HA 4BC7A 5BUQA 1HH2P 3NPDA 3NYQA 5BR8C 4DCTA 2YWBA 4G37A 2YWCA 1WH9A 1FLOA 2Y27A 4DCVA 5KYVA 5K8FA 1N2FA 3PBKA 5KEIA 2WD9A 3CW8X 1QM4A 2P20A 3VNRA 4D57A 4JI1C 3N54B 1MKYA 1XMQC 1UWDA 4I9GA 1TH5A 3VNQA 4D56A 4DR3C 4GXQA 2YCBA 3L8CA 2D7VA 2D1SA 4BC9A 3IEUA 4AQYC 3CQ1A 2AYAA 2PROA 1XHJA 5BSTA 2CXCA 4PUHA 1N36C 5IT9D 3LNOA 4GKKC 3DAYA 2HHHC 5LMUC 3TUFA 4LFAC 5IFIA 1RG9A 4X64C 4JI5C 2ONFA 4G36A 2HJGA 4DV3C 1XNQC 2YX1A 2ATWA 1AMUA 3J80D 1I94C 2M5OA 4PZPA 1T5DX 1HNWC 1LQLA 3R9WA 4IR7A 1RY2A 2QL8A 4JYAC 3LAXA 3S82A 2DYJA 2DHMA 5A19A 2KZ0A 3A9VA 1MDBA 4DV0C 4JV5C 3I07A 3JAMD 2D28C 1P4EA 4KTVA 1XS3A 1MDFA 2QW0X 2ZZNA 3T1YC 1IBLC 2D1TA 3IEVA 2D27A 1QWIA 1O92A 3NI2A 2KZFA 3B7WA 2UXCC 3GR1A 1HR0C 4DR7C 2OBVA 3L95X 4B3RC 2CY1A 5ADZA 1ML8A 1PG3A 4R1MA 4DG9A 1P4EC 1UKKA 3G7SA 3A9UA 1ZB9A 5LMNC 2DPLA 1NY8A 1IBMC 5BUSA 3LNVA 5AE1A 3T1HC 2QVXX 3FCCA 1T5HX 4WS9A 4GS5A 4DUYC 1FUGA 4L7IA 4FUTA 4PUGA 2OPLB 4LFBC 3TDEA 3RG2A 1MD9A 4DG8A 1LCIA 4BBYA 1YJ7A 4MTNA 4L2ZA 1P7LA 2Y4OA 1MXAA 4KTTA 3DHVA 4GXRA 1USPB 3FCEA 2VZEA 2PT7G 4GKJC 2UUAC 4DR6C 2OO4A 3OTOC 4MH4A 2CU6A 3EERA 3TR3A 4EATA 3LUSA 5BSRA 3KXWA 2WP0C 3I08A 4BCAA 3LGXA 3R44A 3TQIA 2UXDC 5JRHA 4ISBA 4OX9C 1HNXC 3A25A 4PUIA 1XRCA 3K6RA 5FLXD 2JMPA 3E7XA 4RM3A 1N33C 4LF8C 4JI2C 2P02A 1XNRC 2PN2A 3CJEA 4B3SC 2P2FA 2JNVA 3C5EA 1EGAA 5A1IA 4HPVA 5BSWA 4DV6C 4RVNA 1USPA 1KKGA 5CZVA 3R9XA 4LF9C 2Z51A 5IWAC 5H9UA 4LE5A 3EQ6A 4KHPC 4DCUA 5K85A 2F4VC 4LF4C 5E7QA 4RVOA 3CQ2A 2P2BA 1PA4A 4ZJZA 4I9FA 1O93A 4DV2C 4D4IA 3IPLA 2UXBC 2D1RA 4JI7C 1IBKC 2D1QA 4DR1C 1N32C 3PESA 4RM2A 3RV2A 3GR0A 4G1IA 5DV9A 4DUZC 3UEBA 2VQEC 4JM1A 3CQ3A 2BH1X 4DV4C 4JI4C 3NYRA 1O90A 2VQFC 1NYEA 1V26A 4NDNA 3UX2A 5KYTA 2P2JA 5A2QD 5LCIA 3GKUA 4JI0C 1O9TA 4DR4C 1N34C 4OXIA 1WCJA 4R1LA 2QVYX 2BJOA 1PU1A 1PG4A 3AF6A 4R0MA 1ZB8A 1VLAA 4B3MC 2ZZMA 2MM9A 4LF5C 2P2QA 4DV5C 3A26A 4LF7C 1BA3A 4YY3C 4LF6C 5BSUA 4RLQA 4XX2A 2ZM6C 4RLFA 5BSVA 2EGTA 5BSMA 4LFCC 2XR1A 5BURA 3O2EA 1M6XA 4WV3A 4U5YD 2MMAB 1V60A 1HNZC 2P2MA 3N2QA 4DR2C 5T8SA 1J5EC 1K0RA 4PHTA 4TPSB 1XRAA 4DV7C 4ZLPA 3J81D 2E8FA 2KDNA 3UX3A 4JI3C 4ODJA 2UUCC 2OPLA 4B3TC 3UOWA 3PROC 4BSZA 2Y4NA 4IZ6A 4NXMC 2E7GA 4K0BA 4PROC 1M6XC 4K0KC 4RMNA 2QVZX 3IMLA 5AE2A 2VSQA 3UZ0A 3ETOA 2ASBA 4JI8C 3E7WA 1GPMA 1JOSA 3VNSA 4DR5C 2E5LC 4L4QA 2E8EA 4JI6C 2UUBC 5CZXA 4D4GA 1MXCA 2E0GA 5T8TA 1FJGC 2UU9C 4X66C
chains in the Genus database with same CATH topology
2KZ0A 2MCQA 4PUIA 1XS3A 2MM9A 4PUGA 1NY8A 4PUHA 2NCLA 2KDNA 5LCIA 3O2EA 3TR3A 2MMAB 2DHMA 1V60A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2KZ0 A;  2MCQ A;  4PUI A;  1XS3 A;  2MM9 A;  4PUG A;  1NY8 A;  4PUH A;  2NCL A;  2KDN A;  5LCI A;  3O2E A;  3TR3 A;  2MMA B;  2DHM A;  1V60 A; 
#chains in the Genus database with same CATH topology
 4X62 C;  4FUQ A;  1XRB A;  2NCL A;  3SO4 A;  5AE3 A;  5A1G A;  1VEH A;  3GPC A;  4YHH C;  3H2T A;  2V7B A;  3A4I A;  4NOZ A;  4DV1 C;  4FTF A;  1IB8 A;  1L2F A;  4X65 C;  3AF5 A;  4NXN C;  3AY0 A;  3ETC A;  3DLP X;  2E8C A;  3CW9 A;  4OYC A;  5GTD A;  1WF3 A;  1V25 A;  1MXB A;  1XMO C;  1ULT A;  2MCQ A;  4DCS A;  2M5H A;  4BC7 A;  5BUQ A;  1HH2 P;  3NPD A;  3NYQ A;  5BR8 C;  4DCT A;  2YWB A;  4G37 A;  2YWC A;  1WH9 A;  1FLO A;  2Y27 A;  4DCV A;  5KYV A;  5K8F A;  1N2F A;  3PBK A;  5KEI A;  2WD9 A;  3CW8 X;  1QM4 A;  2P20 A;  3VNR A;  4D57 A;  4JI1 C;  3N54 B;  1MKY A;  1XMQ C;  1UWD A;  4I9G A;  1TH5 A;  3VNQ A;  4D56 A;  4DR3 C;  4GXQ A;  2YCB A;  3L8C A;  2D7V A;  2D1S A;  4BC9 A;  3IEU A;  4AQY C;  3CQ1 A;  2AYA A;  2PRO A;  1XHJ A;  5BST A;  2CXC A;  4PUH A;  1N36 C;  5IT9 D;  3LNO A;  4GKK C;  3DAY A;  2HHH C;  5LMU C;  3TUF A;  4LFA C;  5IFI A;  1RG9 A;  4X64 C;  4JI5 C;  2ONF A;  4G36 A;  2HJG A;  4DV3 C;  1XNQ C;  2YX1 A;  2ATW A;  1AMU A;  3J80 D;  1I94 C;  2M5O A;  4PZP A;  1T5D X;  1HNW C;  1LQL A;  3R9W A;  4IR7 A;  1RY2 A;  2QL8 A;  4JYA C;  3LAX A;  3S82 A;  2DYJ A;  2DHM A;  5A19 A;  2KZ0 A;  3A9V A;  1MDB A;  4DV0 C;  4JV5 C;  3I07 A;  3JAM D;  2D28 C;  1P4E A;  4KTV A;  1XS3 A;  1MDF A;  2QW0 X;  2ZZN A;  3T1Y C;  1IBL C;  2D1T A;  3IEV A;  2D27 A;  1QWI A;  1O92 A;  3NI2 A;  2KZF A;  3B7W A;  2UXC C;  3GR1 A;  1HR0 C;  4DR7 C;  2OBV A;  3L95 X;  4B3R C;  2CY1 A;  5ADZ A;  1ML8 A;  1PG3 A;  4R1M A;  4DG9 A;  1P4E C;  1UKK A;  3G7S A;  3A9U A;  1ZB9 A;  5LMN C;  2DPL A;  1NY8 A;  1IBM C;  5BUS A;  3LNV A;  5AE1 A;  3T1H C;  2QVX X;  3FCC A;  1T5H X;  4WS9 A;  4GS5 A;  4DUY C;  1FUG A;  4L7I A;  4FUT A;  4PUG A;  2OPL B;  4LFB C;  3TDE A;  3RG2 A;  1MD9 A;  4DG8 A;  1LCI A;  4BBY A;  1YJ7 A;  4MTN A;  4L2Z A;  1P7L A;  2Y4O A;  1MXA A;  4KTT A;  3DHV A;  4GXR A;  1USP B;  3FCE A;  2VZE A;  2PT7 G;  4GKJ C;  2UUA C;  4DR6 C;  2OO4 A;  3OTO C;  4MH4 A;  2CU6 A;  3EER A;  3TR3 A;  4EAT A;  3LUS A;  5BSR A;  3KXW A;  2WP0 C;  3I08 A;  4BCA A;  3LGX A;  3R44 A;  3TQI A;  2UXD C;  5JRH A;  4ISB A;  4OX9 C;  1HNX C;  3A25 A;  4PUI A;  1XRC A;  3K6R A;  5FLX D;  2JMP A;  3E7X A;  4RM3 A;  1N33 C;  4LF8 C;  4JI2 C;  2P02 A;  1XNR C;  2PN2 A;  3CJE A;  4B3S C;  2P2F A;  2JNV A;  3C5E A;  1EGA A;  5A1I A;  4HPV A;  5BSW A;  4DV6 C;  4RVN A;  1USP A;  1KKG A;  5CZV A;  3R9X A;  4LF9 C;  2Z51 A;  5IWA C;  5H9U A;  4LE5 A;  3EQ6 A;  4KHP C;  4DCU A;  5K85 A;  2F4V C;  4LF4 C;  5E7Q A;  4RVO A;  3CQ2 A;  2P2B A;  1PA4 A;  4ZJZ A;  4I9F A;  1O93 A;  4DV2 C;  4D4I A;  3IPL A;  2UXB C;  2D1R A;  4JI7 C;  1IBK C;  2D1Q A;  4DR1 C;  1N32 C;  3PES A;  4RM2 A;  3RV2 A;  3GR0 A;  4G1I A;  5DV9 A;  4DUZ C;  3UEB A;  2VQE C;  4JM1 A;  3CQ3 A;  2BH1 X;  4DV4 C;  4JI4 C;  3NYR A;  1O90 A;  2VQF C;  1NYE A;  1V26 A;  4NDN A;  3UX2 A;  5KYT A;  2P2J A;  5A2Q D;  5LCI A;  3GKU A;  4JI0 C;  1O9T A;  4DR4 C;  1N34 C;  4OXI A;  1WCJ A;  4R1L A;  2QVY X;  2BJO A;  1PU1 A;  1PG4 A;  3AF6 A;  4R0M A;  1ZB8 A;  1VLA A;  4B3M C;  2ZZM A;  2MM9 A;  4LF5 C;  2P2Q A;  4DV5 C;  3A26 A;  4LF7 C;  1BA3 A;  4YY3 C;  4LF6 C;  5BSU A;  4RLQ A;  4XX2 A;  2ZM6 C;  4RLF A;  5BSV A;  2EGT A;  5BSM A;  4LFC C;  2XR1 A;  5BUR A;  3O2E A;  1M6X A;  4WV3 A;  4U5Y D;  2MMA B;  1V60 A;  1HNZ C;  2P2M A;  3N2Q A;  4DR2 C;  5T8S A;  1J5E C;  1K0R A;  4PHT A;  4TPS B;  1XRA A;  4DV7 C;  4ZLP A;  3J81 D;  2E8F A;  2KDN A;  3UX3 A;  4JI3 C;  4ODJ A;  2UUC C;  2OPL A;  4B3T C;  3UOW A;  3PRO C;  4BSZ A;  2Y4N A;  4IZ6 A;  4NXM C;  2E7G A;  4K0B A;  4PRO C;  1M6X C;  4K0K C;  4RMN A;  2QVZ X;  3IML A;  5AE2 A;  2VSQ A;  3UZ0 A;  3ETO A;  2ASB A;  4JI8 C;  3E7W A;  1GPM A;  1JOS A;  3VNS A;  4DR5 C;  2E5L C;  4L4Q A;  2E8E A;  4JI6 C;  2UUB C;  5CZX A;  4D4G A;  1MXC A;  2E0G A;  5T8T A;  1FJG C;  2UU9 C;  4X66 C; 
#chains in the Genus database with same CATH homology
 2KZ0 A;  2MCQ A;  4PUI A;  1XS3 A;  2MM9 A;  4PUG A;  1NY8 A;  4PUH A;  2NCL A;  2KDN A;  5LCI A;  3O2E A;  3TR3 A;  2MMA B;  2DHM A;  1V60 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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