2Z51A

Crystal structure of arabidopsis cnfu involved in iron-sulfur cluster biosynthesis
Total Genus 51
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
51
sequence length
154
structure length
154
Chain Sequence
MVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNVVRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKVLEEIRPYLIGTADGSLDLVEIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLI
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural Analysis of Arabidopsis CnfU Protein: An Iron-Sulfur Cluster Biosynthetic Scaffold in Chloroplasts.
pubmed doi rcsb
source organism Arabidopsis thaliana
molecule tags Metal transport
molecule keywords NifU-like protein 2, chloroplast
total genus 51
structure length 154
sequence length 154
ec nomenclature
pdb deposition date 2007-06-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01106 NifU NifU-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.300.130 Alpha Beta 2-Layer Sandwich GMP Synthetase; Chain A, domain 3 Fe-S cluster assembly (FSCA) 2z51A01
3.30.300.130 Alpha Beta 2-Layer Sandwich GMP Synthetase; Chain A, domain 3 Fe-S cluster assembly (FSCA) 2z51A02
3LNOA 1VEHA 1UWDA 2JNVA 1WCJA 2Z51A 2M5OA 3CQ1A 1TH5A 2CU6A 2M5HA 3CQ3A 3UX2A 1XHJA 3UX3A 3CQ2A
chains in the Genus database with same CATH superfamily
1O90A 3TR3A 4ZLPA 3NYRA 1P4EA 3NI2A 4OX9C 2P20A 3R9XA 4JI4C 2E8FA 3TQIA 3GKUA 2YWBA 4PUIA 2E0GA 4DV2C 4I9GA 3VNQA 4R0MA 4LF9C 1USPB 4B3SC 3FCEA 1WH9A 4LF8C 3IEVA 3I07A 4JI8C 1P7LA 3G7SA 1HR0C 1V25A 3VNRA 5AE2A 2D28C 1MDFA 4U5YD 4PZPA 4DCUA 4D4IA 4D4GA 1M6XC 1IB8A 1I94C 3CW9A 2UU9C 5K85A 3LNVA 3ETOA 4RLFA 3H2TA 4X66C 1MXAA 3DLPX 4FUTA 4DCTA 2OBVA 1ML8A 5CZXA 3RG2A 5KEIA 4IZ6A 3TUFA 2UUBC 4G1IA 4DR3C 3R9WA 2P2MA 3LGXA 4FUQA 5K8FA 3UZ0A 2DYJA 4JI6C 3R44A 1USPA 4GXRA 5IFIA 2D1SA 2E8CA 4LFBC 4OYCA 3A26A 2MM9A 5CZVA 2QVZX 1O9TA 2P2QA 4RVOA 2P2BA 2PROA 4BCAA 1XRBA 1MXCA 2YX1A 3PBKA 2CU6A 4EATA 2AYAA 4L7IA 3TDEA 1NY8A 5LMUC 3AF6A 1V60A 2VSQA 1N36C 2HHHC 3NYQA 4D57A 1PG4A 2DHMA 2KDNA 2UUCC 1P4EC 2YWCA 3GR0A 1XHJA 2E7GA 1NYEA 4LF6C 2ATWA 4OXIA 4HPVA 5LCIA 2QL8A 1MXBA 2KZ0A 1PG3A 3J80D 3CQ2A 1YJ7A 2QW0X 4FTFA 1XS3A 1IBMC 4JI0C 3ETCA 4R1MA 2PN2A 3FCCA 4DG9A 3L8CA 2MMAB 4LFAC 1FUGA 2YCBA 4NOZA 1BA3A 4JI2C 1L2FA 4KHPC 4DV1C 1MDBA 3T1HC 5A2QD 4MH4A 5H9UA 3B7WA 1XMOC 1O92A 1HNXC 4DG8A 1VLAA 1ZB8A 1T5HX 2D1RA 3AF5A 2BJOA 2PT7G 2P2JA 2JMPA 2EGTA 3O2EA 4L4QA 3GR1A 4KTVA 2VQEC 5BSRA 5FLXD 1LQLA 2OPLB 4AQYC 4GKJC 3VNSA 3A9VA 2P02A 2UXBC 4JI5C 1UWDA 3CJEA 4X65C 5LMNC 4DV7C 1N34C 2VZEA 2Y4OA 4X62C 1M6XA 2D1QA 4R1LA 3E7WA 4X64C 4JI7C 4RM2A 4RVNA 1PA4A 3C5EA 3J81D 4DUZC 3UX3A 4DV5C 4JYAC 1JOSA 3IPLA 4D56A 1ZB9A 4K0KC 4ZJZA 2NCLA 4DV3C 5T8TA 4LE5A 4JV5C 3JAMD 2BH1X 4LF5C 4LF4C 4YHHC 1HNWC 5AE1A 1XMQC 1TH5A 2WD9A 3DAYA 2F4VC 3EQ6A 1HH2P 4DV0C 3S82A 1XRCA 5A1GA 4RMNA 4DR6C 4PROC 3OTOC 2ONFA 3A25A 3E7XA 1N2FA 2D1TA 2Z51A 2ZM6C 4ODJA 3UX2A 3N2QA 2MCQA 5BSVA 5BSWA 5KYVA 4BBYA 1RG9A 1KKGA 4WS9A 1FJGC 3PESA 4GS5A 4B3TC 3NPDA 1PU1A 4GKKC 4RLQA 5A19A 5E7QA 2Y27A 2UXDC 2E8EA 1VEHA 4G36A 4DR2C 1GPMA 1IBLC 3L95X 4BSZA 4XX2A 3CQ3A 4NXNC 1EGAA 3LAXA 4YY3C 3CQ1A 4DR4C 1QWIA 5A1IA 4NXMC 3RV2A 4K0BA 2DPLA 2CXCA 4PHTA 3IMLA 4G37A 2KZFA 4PUGA 3A9UA 3A4IA 4DV6C 2UXCC 3UOWA 5BSUA 4DR1C 1XRAA 1V26A 3AY0A 4GXQA 1T5DX 5BUQA 3CW8X 2ZZNA 2D7VA 2M5HA 1WF3A 1J5EC 4WV3A 1MD9A 2UUAC 2QVXX 5BUSA 2JNVA 4I9FA 2ASBA 2ZZMA 1LCIA 1MKYA 2HJGA 3LNOA 3IEUA 4LF7C 1O93A 5ADZA 5T8SA 4RM3A 4L2ZA 4IR7A 4NDNA 1RY2A 4DUYC 5BSTA 3PROC 4KTTA 2OPLA 1UKKA 3I08A 3N54B 4DR5C 5IT9D 4TPSB 5AE3A 1AMUA 4BC9A 2QVYX 4DCVA 1QM4A 2CY1A 5BURA 1N32C 4LFCC 4DR7C 3DHVA 5IWAC 4MTNA 2M5OA 2E5LC 2V7BA 1XNRC 1N33C 2P2FA 3SO4A 1K0RA 2XR1A 4JI3C 1IBKC 3LUSA 2VQFC 5GTDA 4PUHA 4BC7A 3T1YC 4B3MC 3KXWA 4JM1A 2WP0C 5JRHA 3EERA 1HNZC 2OO4A 3GPCA 4B3RC 1ULTA 5KYTA 4DV4C 5BSMA 3UEBA 2D27A 4DCSA 2Y4NA 1FLOA 5DV9A 5BR8C 4JI1C 1WCJA 3K6RA 1XNQC 4ISBA
chains in the Genus database with same CATH topology
3LNOA 1VEHA 1UWDA 2JNVA 1WCJA 2Z51A 2M5OA 3CQ1A 1TH5A 2CU6A 2M5HA 3CQ3A 3UX2A 1XHJA 3UX3A 3CQ2A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3LNO A;  1VEH A;  1UWD A;  2JNV A;  1WCJ A;  2Z51 A;  2M5O A;  3CQ1 A;  1TH5 A;  2CU6 A;  2M5H A;  3CQ3 A;  3UX2 A;  1XHJ A;  3UX3 A;  3CQ2 A; 
#chains in the Genus database with same CATH topology
 1O90 A;  3TR3 A;  4ZLP A;  3NYR A;  1P4E A;  3NI2 A;  4OX9 C;  2P20 A;  3R9X A;  4JI4 C;  2E8F A;  3TQI A;  3GKU A;  2YWB A;  4PUI A;  2E0G A;  4DV2 C;  4I9G A;  3VNQ A;  4R0M A;  4LF9 C;  1USP B;  4B3S C;  3FCE A;  1WH9 A;  4LF8 C;  3IEV A;  3I07 A;  4JI8 C;  1P7L A;  3G7S A;  1HR0 C;  1V25 A;  3VNR A;  5AE2 A;  2D28 C;  1MDF A;  4U5Y D;  4PZP A;  4DCU A;  4D4I A;  4D4G A;  1M6X C;  1IB8 A;  1I94 C;  3CW9 A;  2UU9 C;  5K85 A;  3LNV A;  3ETO A;  4RLF A;  3H2T A;  4X66 C;  1MXA A;  3DLP X;  4FUT A;  4DCT A;  2OBV A;  1ML8 A;  5CZX A;  3RG2 A;  5KEI A;  4IZ6 A;  3TUF A;  2UUB C;  4G1I A;  4DR3 C;  3R9W A;  2P2M A;  3LGX A;  4FUQ A;  5K8F A;  3UZ0 A;  2DYJ A;  4JI6 C;  3R44 A;  1USP A;  4GXR A;  5IFI A;  2D1S A;  2E8C A;  4LFB C;  4OYC A;  3A26 A;  2MM9 A;  5CZV A;  2QVZ X;  1O9T A;  2P2Q A;  4RVO A;  2P2B A;  2PRO A;  4BCA A;  1XRB A;  1MXC A;  2YX1 A;  3PBK A;  2CU6 A;  4EAT A;  2AYA A;  4L7I A;  3TDE A;  1NY8 A;  5LMU C;  3AF6 A;  1V60 A;  2VSQ A;  1N36 C;  2HHH C;  3NYQ A;  4D57 A;  1PG4 A;  2DHM A;  2KDN A;  2UUC C;  1P4E C;  2YWC A;  3GR0 A;  1XHJ A;  2E7G A;  1NYE A;  4LF6 C;  2ATW A;  4OXI A;  4HPV A;  5LCI A;  2QL8 A;  1MXB A;  2KZ0 A;  1PG3 A;  3J80 D;  3CQ2 A;  1YJ7 A;  2QW0 X;  4FTF A;  1XS3 A;  1IBM C;  4JI0 C;  3ETC A;  4R1M A;  2PN2 A;  3FCC A;  4DG9 A;  3L8C A;  2MMA B;  4LFA C;  1FUG A;  2YCB A;  4NOZ A;  1BA3 A;  4JI2 C;  1L2F A;  4KHP C;  4DV1 C;  1MDB A;  3T1H C;  5A2Q D;  4MH4 A;  5H9U A;  3B7W A;  1XMO C;  1O92 A;  1HNX C;  4DG8 A;  1VLA A;  1ZB8 A;  1T5H X;  2D1R A;  3AF5 A;  2BJO A;  2PT7 G;  2P2J A;  2JMP A;  2EGT A;  3O2E A;  4L4Q A;  3GR1 A;  4KTV A;  2VQE C;  5BSR A;  5FLX D;  1LQL A;  2OPL B;  4AQY C;  4GKJ C;  3VNS A;  3A9V A;  2P02 A;  2UXB C;  4JI5 C;  1UWD A;  3CJE A;  4X65 C;  5LMN C;  4DV7 C;  1N34 C;  2VZE A;  2Y4O A;  4X62 C;  1M6X A;  2D1Q A;  4R1L A;  3E7W A;  4X64 C;  4JI7 C;  4RM2 A;  4RVN A;  1PA4 A;  3C5E A;  3J81 D;  4DUZ C;  3UX3 A;  4DV5 C;  4JYA C;  1JOS A;  3IPL A;  4D56 A;  1ZB9 A;  4K0K C;  4ZJZ A;  2NCL A;  4DV3 C;  5T8T A;  4LE5 A;  4JV5 C;  3JAM D;  2BH1 X;  4LF5 C;  4LF4 C;  4YHH C;  1HNW C;  5AE1 A;  1XMQ C;  1TH5 A;  2WD9 A;  3DAY A;  2F4V C;  3EQ6 A;  1HH2 P;  4DV0 C;  3S82 A;  1XRC A;  5A1G A;  4RMN A;  4DR6 C;  4PRO C;  3OTO C;  2ONF A;  3A25 A;  3E7X A;  1N2F A;  2D1T A;  2Z51 A;  2ZM6 C;  4ODJ A;  3UX2 A;  3N2Q A;  2MCQ A;  5BSV A;  5BSW A;  5KYV A;  4BBY A;  1RG9 A;  1KKG A;  4WS9 A;  1FJG C;  3PES A;  4GS5 A;  4B3T C;  3NPD A;  1PU1 A;  4GKK C;  4RLQ A;  5A19 A;  5E7Q A;  2Y27 A;  2UXD C;  2E8E A;  1VEH A;  4G36 A;  4DR2 C;  1GPM A;  1IBL C;  3L95 X;  4BSZ A;  4XX2 A;  3CQ3 A;  4NXN C;  1EGA A;  3LAX A;  4YY3 C;  3CQ1 A;  4DR4 C;  1QWI A;  5A1I A;  4NXM C;  3RV2 A;  4K0B A;  2DPL A;  2CXC A;  4PHT A;  3IML A;  4G37 A;  2KZF A;  4PUG A;  3A9U A;  3A4I A;  4DV6 C;  2UXC C;  3UOW A;  5BSU A;  4DR1 C;  1XRA A;  1V26 A;  3AY0 A;  4GXQ A;  1T5D X;  5BUQ A;  3CW8 X;  2ZZN A;  2D7V A;  2M5H A;  1WF3 A;  1J5E C;  4WV3 A;  1MD9 A;  2UUA C;  2QVX X;  5BUS A;  2JNV A;  4I9F A;  2ASB A;  2ZZM A;  1LCI A;  1MKY A;  2HJG A;  3LNO A;  3IEU A;  4LF7 C;  1O93 A;  5ADZ A;  5T8S A;  4RM3 A;  4L2Z A;  4IR7 A;  4NDN A;  1RY2 A;  4DUY C;  5BST A;  3PRO C;  4KTT A;  2OPL A;  1UKK A;  3I08 A;  3N54 B;  4DR5 C;  5IT9 D;  4TPS B;  5AE3 A;  1AMU A;  4BC9 A;  2QVY X;  4DCV A;  1QM4 A;  2CY1 A;  5BUR A;  1N32 C;  4LFC C;  4DR7 C;  3DHV A;  5IWA C;  4MTN A;  2M5O A;  2E5L C;  2V7B A;  1XNR C;  1N33 C;  2P2F A;  3SO4 A;  1K0R A;  2XR1 A;  4JI3 C;  1IBK C;  3LUS A;  2VQF C;  5GTD A;  4PUH A;  4BC7 A;  3T1Y C;  4B3M C;  3KXW A;  4JM1 A;  2WP0 C;  5JRH A;  3EER A;  1HNZ C;  2OO4 A;  3GPC A;  4B3R C;  1ULT A;  5KYT A;  4DV4 C;  5BSM A;  3UEB A;  2D27 A;  4DCS A;  2Y4N A;  1FLO A;  5DV9 A;  5BR8 C;  4JI1 C;  1WCJ A;  3K6R A;  1XNQ C;  4ISB A; 
#chains in the Genus database with same CATH homology
 3LNO A;  1VEH A;  1UWD A;  2JNV A;  1WCJ A;  2Z51 A;  2M5O A;  3CQ1 A;  1TH5 A;  2CU6 A;  2M5H A;  3CQ3 A;  3UX2 A;  1XHJ A;  3UX3 A;  3CQ2 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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