2Z51A

Crystal structure of arabidopsis cnfu involved in iron-sulfur cluster biosynthesis
Total Genus 51
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
51
sequence length
154
structure length
154
Chain Sequence
MVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNVVRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKVLEEIRPYLIGTADGSLDLVEIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLI
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural Analysis of Arabidopsis CnfU Protein: An Iron-Sulfur Cluster Biosynthetic Scaffold in Chloroplasts.
pubmed doi rcsb
source organism Arabidopsis thaliana
molecule tags Metal transport
molecule keywords NifU-like protein 2, chloroplast
total genus 51
structure length 154
sequence length 154
ec nomenclature
pdb deposition date 2007-06-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01106 NifU NifU-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.300.130 Alpha Beta 2-Layer Sandwich GMP Synthetase; Chain A, domain 3 Fe-S cluster assembly (FSCA) 2z51A01
3.30.300.130 Alpha Beta 2-Layer Sandwich GMP Synthetase; Chain A, domain 3 Fe-S cluster assembly (FSCA) 2z51A02
1UWDA 2JNVA 1XHJA 3CQ2A 3CQ1A 2M5HA 3UX2A 1TH5A 1WCJA 3CQ3A 3UX3A 3LNOA 2CU6A 1VEHA 2Z51A 2M5OA
chains in the Genus database with same CATH superfamily
1IB8A 1MD9A 1NY8A 4DV0C 2E7GA 1M6XC 2P20A 4NDNA 5DV9A 3OTOC 2XR1A 3E7XA 4X62C 2ATWA 1P7LA 5IFIA 4DR6C 3UZ0A 1IBKC 1XRCA 3AF6A 1V25A 3K6RA 4G36A 2QVXX 3KXWA 4ODJA 2ZZNA 2ASBA 5T8TA 4PHTA 2Y4OA 2VQEC 1N33C 4MTNA 3JAMD 3LNVA 2JMPA 3UOWA 3DAYA 4JI4C 3I08A 3VNRA 1HNWC 4MH4A 5BURA 1LCIA 3LGXA 4FUQA 5K85A 5JRHA 2YCBA 1V26A 1N32C 4GXQA 3T1HC 1O90A 5BSWA 4G37A 3L8CA 1HH2P 5K8FA 1QWIA 1LQLA 3LUSA 4YY3C 1ZB8A 4BCAA 1RY2A 3G7SA 4DR7C 1ZB9A 1USPB 2P2QA 3A25A 4BSZA 3TDEA 2UUBC 4RLFA 1O9TA 4K0KC 4KTVA 2QVZX 4DCSA 2WP0C 5E7QA 2QW0X 2V7BA 2M5HA 4RLQA 3J80D 4U5YD 4JI8C 4G1IA 2OO4A 4DUYC 4LFAC 3PESA 4IZ6A 1T5DX 3CJEA 4DV7C 2E5LC 3R9WA 4LFCC 4FTFA 4PROC 5FLXD 2QL8A 4DR2C 2QVYX 1J5EC 2MM9A 4L7IA 3CQ1A 2OPLB 3L95X 3SO4A 3GR0A 5A1GA 2WD9A 4FUTA 4RM2A 3TR3A 2HHHC 4GS5A 4R1MA 2D27A 2KZ0A 2OPLA 2CU6A 3GR1A 1QM4A 1MXBA 3RV2A 4PUGA 5T8SA 5LMUC 3NYQA 4JI5C 2YX1A 2M5OA 1XMQC 2PT7G 3AY0A 1XHJA 3B7WA 3RG2A 4DV2C 5CZXA 4NXNC 1UWDA 3CQ2A 4RVOA 2CY1A 1XRAA 3LAXA 1FLOA 4LF4C 2NCLA 2D1TA 2UUCC 5KYVA 1T5HX 4DCUA 2P2MA 4JM1A 2BJOA 1HNZC 1FUGA 2EGTA 2ONFA 1L2FA 3N54B 3I07A 3A26A 4I9FA 1MXAA 2P02A 5BSUA 4B3TC 4B3MC 4KHPC 5A1IA 1XRBA 3R9XA 4I9GA 1TH5A 1WH9A 3A4IA 4X64C 4ZJZA 5GTDA 4PUIA 4WV3A 3T1YC 3H2TA 4DV1C 3IEVA 4DCTA 3A9UA 1IBMC 1RG9A 2P2BA 4RVNA 1MDBA 2PN2A 2KZFA 5BR8C 4LF6C 4OXIA 4B3RC 2Y27A 3VNSA 1O92A 4OX9C 3A9VA 2UXCC 4LF9C 2BH1X 2UU9C 1MKYA 4B3SC 2F4VC 1USPA 4D56A 4D4IA 4OYCA 2UUAC 3UEBA 2Y4NA 4TPSB 1HR0C 3UX2A 4ISBA 2D7VA 4JI0C 5BSVA 4ZLPA 2PROA 3UX3A 1ML8A 4BC9A 4DV4C 3PROC 2ZM6C 1BA3A 4L4QA 1PG3A 3FCEA 2E8EA 5BSTA 1XMOC 1XNRC 4DR5C 5A19A 3DLPX 4JI1C 4BC7A 4RM3A 4NOZA 2E8CA 4IR7A 3EERA 4LFBC 4D4GA 4JI2C 4X65C 1EGAA 3VNQA 3FCCA 2D1RA 1ULTA 4JI7C 3IEUA 4DV5C 2ZZMA 5LMNC 3IPLA 2DYJA 3DHVA 4DV6C 4DR4C 5BSMA 3GPCA 4GXRA 1WF3A 1WCJA 2E0GA 3NI2A 1XS3A 4DG8A 2YWCA 3J81D 5IT9D 3N2QA 1KKGA 3NYRA 4LF5C 1AMUA 4GKKC 1I94C 1XNQC 4YHHC 4WS9A 1VLAA 1P4EA 2DPLA 3C5EA 2P2JA 3AF5A 4DR3C 2AYAA 2OBVA 1PG4A 3CW9A 1PA4A 4GKJC 2D28C 5A2QD 3PBKA 1P4EC 5BUSA 1IBLC 5CZVA 3R44A 2YWBA 1GPMA 4DV3C 3EQ6A 5H9UA 1O93A 3GKUA 1M6XA 4KTTA 2KDNA 1V60A 5KYTA 4RMNA 4XX2A 3CW8X 5KEIA 2CXCA 4L2ZA 5BUQA 2VQFC 3CQ3A 2MMAB 1N34C 2UXDC 2JNVA 4DR1C 5AE3A 5AE2A 4DCVA 4R0MA 4JV5C 3TUFA 4BBYA 5IWAC 1JOSA 2E8FA 2Z51A 1N36C 2DHMA 3LNOA 4D57A 4LF8C 4PUHA 2MCQA 4X66C 1MXCA 2D1SA 1HNXC 4HPVA 1NYEA 4DG9A 4EATA 3TQIA 5ADZA 1PU1A 1MDFA 3NPDA 4LE5A 3O2EA 1UKKA 4JYAC 1K0RA 3IMLA 5LCIA 2VZEA 3S82A 3ETCA 4NXMC 1N2FA 4R1LA 1FJGC 5AE1A 1YJ7A 4PZPA 4JI3C 2HJGA 1VEHA 3ETOA 2D1QA 4AQYC 4LF7C 2P2FA 3E7WA 2VSQA 2UXBC 4JI6C 4DUZC 5BSRA 4K0BA
chains in the Genus database with same CATH topology
1UWDA 2JNVA 1XHJA 3CQ2A 3CQ1A 2M5HA 3UX2A 1TH5A 1WCJA 3CQ3A 3UX3A 3LNOA 2CU6A 1VEHA 2Z51A 2M5OA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1UWD A;  2JNV A;  1XHJ A;  3CQ2 A;  3CQ1 A;  2M5H A;  3UX2 A;  1TH5 A;  1WCJ A;  3CQ3 A;  3UX3 A;  3LNO A;  2CU6 A;  1VEH A;  2Z51 A;  2M5O A; 
#chains in the Genus database with same CATH topology
 1IB8 A;  1MD9 A;  1NY8 A;  4DV0 C;  2E7G A;  1M6X C;  2P20 A;  4NDN A;  5DV9 A;  3OTO C;  2XR1 A;  3E7X A;  4X62 C;  2ATW A;  1P7L A;  5IFI A;  4DR6 C;  3UZ0 A;  1IBK C;  1XRC A;  3AF6 A;  1V25 A;  3K6R A;  4G36 A;  2QVX X;  3KXW A;  4ODJ A;  2ZZN A;  2ASB A;  5T8T A;  4PHT A;  2Y4O A;  2VQE C;  1N33 C;  4MTN A;  3JAM D;  3LNV A;  2JMP A;  3UOW A;  3DAY A;  4JI4 C;  3I08 A;  3VNR A;  1HNW C;  4MH4 A;  5BUR A;  1LCI A;  3LGX A;  4FUQ A;  5K85 A;  5JRH A;  2YCB A;  1V26 A;  1N32 C;  4GXQ A;  3T1H C;  1O90 A;  5BSW A;  4G37 A;  3L8C A;  1HH2 P;  5K8F A;  1QWI A;  1LQL A;  3LUS A;  4YY3 C;  1ZB8 A;  4BCA A;  1RY2 A;  3G7S A;  4DR7 C;  1ZB9 A;  1USP B;  2P2Q A;  3A25 A;  4BSZ A;  3TDE A;  2UUB C;  4RLF A;  1O9T A;  4K0K C;  4KTV A;  2QVZ X;  4DCS A;  2WP0 C;  5E7Q A;  2QW0 X;  2V7B A;  2M5H A;  4RLQ A;  3J80 D;  4U5Y D;  4JI8 C;  4G1I A;  2OO4 A;  4DUY C;  4LFA C;  3PES A;  4IZ6 A;  1T5D X;  3CJE A;  4DV7 C;  2E5L C;  3R9W A;  4LFC C;  4FTF A;  4PRO C;  5FLX D;  2QL8 A;  4DR2 C;  2QVY X;  1J5E C;  2MM9 A;  4L7I A;  3CQ1 A;  2OPL B;  3L95 X;  3SO4 A;  3GR0 A;  5A1G A;  2WD9 A;  4FUT A;  4RM2 A;  3TR3 A;  2HHH C;  4GS5 A;  4R1M A;  2D27 A;  2KZ0 A;  2OPL A;  2CU6 A;  3GR1 A;  1QM4 A;  1MXB A;  3RV2 A;  4PUG A;  5T8S A;  5LMU C;  3NYQ A;  4JI5 C;  2YX1 A;  2M5O A;  1XMQ C;  2PT7 G;  3AY0 A;  1XHJ A;  3B7W A;  3RG2 A;  4DV2 C;  5CZX A;  4NXN C;  1UWD A;  3CQ2 A;  4RVO A;  2CY1 A;  1XRA A;  3LAX A;  1FLO A;  4LF4 C;  2NCL A;  2D1T A;  2UUC C;  5KYV A;  1T5H X;  4DCU A;  2P2M A;  4JM1 A;  2BJO A;  1HNZ C;  1FUG A;  2EGT A;  2ONF A;  1L2F A;  3N54 B;  3I07 A;  3A26 A;  4I9F A;  1MXA A;  2P02 A;  5BSU A;  4B3T C;  4B3M C;  4KHP C;  5A1I A;  1XRB A;  3R9X A;  4I9G A;  1TH5 A;  1WH9 A;  3A4I A;  4X64 C;  4ZJZ A;  5GTD A;  4PUI A;  4WV3 A;  3T1Y C;  3H2T A;  4DV1 C;  3IEV A;  4DCT A;  3A9U A;  1IBM C;  1RG9 A;  2P2B A;  4RVN A;  1MDB A;  2PN2 A;  2KZF A;  5BR8 C;  4LF6 C;  4OXI A;  4B3R C;  2Y27 A;  3VNS A;  1O92 A;  4OX9 C;  3A9V A;  2UXC C;  4LF9 C;  2BH1 X;  2UU9 C;  1MKY A;  4B3S C;  2F4V C;  1USP A;  4D56 A;  4D4I A;  4OYC A;  2UUA C;  3UEB A;  2Y4N A;  4TPS B;  1HR0 C;  3UX2 A;  4ISB A;  2D7V A;  4JI0 C;  5BSV A;  4ZLP A;  2PRO A;  3UX3 A;  1ML8 A;  4BC9 A;  4DV4 C;  3PRO C;  2ZM6 C;  1BA3 A;  4L4Q A;  1PG3 A;  3FCE A;  2E8E A;  5BST A;  1XMO C;  1XNR C;  4DR5 C;  5A19 A;  3DLP X;  4JI1 C;  4BC7 A;  4RM3 A;  4NOZ A;  2E8C A;  4IR7 A;  3EER A;  4LFB C;  4D4G A;  4JI2 C;  4X65 C;  1EGA A;  3VNQ A;  3FCC A;  2D1R A;  1ULT A;  4JI7 C;  3IEU A;  4DV5 C;  2ZZM A;  5LMN C;  3IPL A;  2DYJ A;  3DHV A;  4DV6 C;  4DR4 C;  5BSM A;  3GPC A;  4GXR A;  1WF3 A;  1WCJ A;  2E0G A;  3NI2 A;  1XS3 A;  4DG8 A;  2YWC A;  3J81 D;  5IT9 D;  3N2Q A;  1KKG A;  3NYR A;  4LF5 C;  1AMU A;  4GKK C;  1I94 C;  1XNQ C;  4YHH C;  4WS9 A;  1VLA A;  1P4E A;  2DPL A;  3C5E A;  2P2J A;  3AF5 A;  4DR3 C;  2AYA A;  2OBV A;  1PG4 A;  3CW9 A;  1PA4 A;  4GKJ C;  2D28 C;  5A2Q D;  3PBK A;  1P4E C;  5BUS A;  1IBL C;  5CZV A;  3R44 A;  2YWB A;  1GPM A;  4DV3 C;  3EQ6 A;  5H9U A;  1O93 A;  3GKU A;  1M6X A;  4KTT A;  2KDN A;  1V60 A;  5KYT A;  4RMN A;  4XX2 A;  3CW8 X;  5KEI A;  2CXC A;  4L2Z A;  5BUQ A;  2VQF C;  3CQ3 A;  2MMA B;  1N34 C;  2UXD C;  2JNV A;  4DR1 C;  5AE3 A;  5AE2 A;  4DCV A;  4R0M A;  4JV5 C;  3TUF A;  4BBY A;  5IWA C;  1JOS A;  2E8F A;  2Z51 A;  1N36 C;  2DHM A;  3LNO A;  4D57 A;  4LF8 C;  4PUH A;  2MCQ A;  4X66 C;  1MXC A;  2D1S A;  1HNX C;  4HPV A;  1NYE A;  4DG9 A;  4EAT A;  3TQI A;  5ADZ A;  1PU1 A;  1MDF A;  3NPD A;  4LE5 A;  3O2E A;  1UKK A;  4JYA C;  1K0R A;  3IML A;  5LCI A;  2VZE A;  3S82 A;  3ETC A;  4NXM C;  1N2F A;  4R1L A;  1FJG C;  5AE1 A;  1YJ7 A;  4PZP A;  4JI3 C;  2HJG A;  1VEH A;  3ETO A;  2D1Q A;  4AQY C;  4LF7 C;  2P2F A;  3E7W A;  2VSQ A;  2UXB C;  4JI6 C;  4DUZ C;  5BSR A;  4K0B A; 
#chains in the Genus database with same CATH homology
 1UWD A;  2JNV A;  1XHJ A;  3CQ2 A;  3CQ1 A;  2M5H A;  3UX2 A;  1TH5 A;  1WCJ A;  3CQ3 A;  3UX3 A;  3LNO A;  2CU6 A;  1VEH A;  2Z51 A;  2M5O A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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