2Z51A

Crystal structure of arabidopsis cnfu involved in iron-sulfur cluster biosynthesis
Total Genus 51
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
51
sequence length
154
structure length
154
Chain Sequence
MVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNVVRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKVLEEIRPYLIGTADGSLDLVEIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLI
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Metal transport
molecule keywords NifU-like protein 2, chloroplast
publication title Structural Analysis of Arabidopsis CnfU Protein: An Iron-Sulfur Cluster Biosynthetic Scaffold in Chloroplasts.
pubmed doi rcsb
source organism Arabidopsis thaliana
total genus 51
structure length 154
sequence length 154
ec nomenclature
pdb deposition date 2007-06-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01106 NifU NifU-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.300.130 Alpha Beta 2-Layer Sandwich GMP Synthetase; Chain A, domain 3 Fe-S cluster assembly (FSCA) 2z51A01
3.30.300.130 Alpha Beta 2-Layer Sandwich GMP Synthetase; Chain A, domain 3 Fe-S cluster assembly (FSCA) 2z51A02
3UX2A 3CQ3A 1XHJA 1TH5A 1WCJA 2CU6A 2M5HA 1UWDA 3CQ1A 3CQ2A 1VEHA 2M5OA 2Z51A 2JNVA 3UX3A 3LNOA
chains in the Genus database with same CATH superfamily
3JAMD 2QVZX 3KXWA 5A19A 3ETOA 2OPLA 4MTNA 4LF6C 1ZB8A 4DUYC 1ZB9A 4LE5A 4LF9C 2WP0C 1PG3A 1XS3A 5GTDA 3EQ6A 4DR2C 5BURA 4DCSA 3I08A 4R0MA 2KDNA 1HNXC 5LMUC 2CU6A 4D4GA 4JM1A 4R1LA 4RVNA 4DCUA 4DV3C 3PESA 5FLXD 5LMNC 2VSQA 4DCTA 4JI1C 2Y4OA 5AE3A 4FTFA 4AQYC 3UX2A 3VNQA 3CQ1A 1P4EC 1PU1A 2D1RA 3CW9A 1TH5A 5H9UA 2MMAB 4L4QA 2CXCA 2DHMA 2DPLA 2QL8A 2V7BA 1O93A 3LGXA 5A1GA 1IBLC 3AF6A 2Y4NA 2QVYX 2E0GA 3L95X 3LNVA 4HPVA 4LF7C 3B7WA 2OBVA 2F4VC 4NOZA 1MKYA 4DV0C 5BSRA 4B3MC 4G37A 4FUQA 4DR6C 4DG9A 4YHHC 1T5HX 5IFIA 1O92A 4JI2C 1IB8A 1I94C 4D57A 1V25A 1ULTA 1VLAA 3T1YC 3UX3A 1XRCA 2OPLB 5BUQA 3CW8X 4DV1C 1O90A 2E8CA 3DAYA 5JRHA 4I9FA 3A26A 2P20A 2PN2A 4YY3C 1EGAA 2P2JA 4LFBC 3E7XA 1LQLA 5ADZA 2HHHC 3N2QA 4R1MA 5KYTA 4JI5C 5KYVA 4FUTA 3GR1A 4K0BA 4JI6C 2HJGA 4NDNA 4GXQA 2D28C 3DLPX 5A2QD 3R9WA 2XR1A 2UXBC 2DYJA 5KEIA 4ODJA 5A1IA 2JMPA 4DV2C 4OXIA 2P2FA 2NCLA 5AE1A 3H2TA 2ATWA 4RM2A 2ZZNA 1GPMA 1N36C 4DG8A 1WF3A 1XNRC 3FCCA 2E5LC 3J81D 4DR5C 1HH2P 5CZVA 3PBKA 3CQ2A 3AY0A 1LCIA 2P2QA 4JI8C 1M6XA 1V26A 2D27A 1WH9A 1IBKC 2E8EA 4ISBA 5T8TA 1UWDA 2M5OA 3TDEA 1HR0C 4PUHA 3L8CA 1MDBA 4IZ6A 1AMUA 1MXAA 2YWCA 1HNZC 3A9UA 3K6RA 3A4IA 3IEVA 3TR3A 3PROC 1MDFA 3UEBA 5BSMA 3AF5A 4LF8C 2QW0X 4DCVA 4DUZC 2D1TA 3R44A 1NYEA 1FJGC 4EATA 3SO4A 4PUGA 1MXBA 3VNRA 3VNSA 3LAXA 4JI4C 5BR8C 1VEHA 1P7LA 5K85A 4X66C 1BA3A 3ETCA 4TPSB 4L2ZA 3RV2A 1IBMC 3FCEA 4NXNC 3G7SA 3TQIA 2UUBC 4PROC 2MCQA 4RLFA 1K0RA 2VQFC 2KZ0A 3J80D 5LCIA 2PROA 1L2FA 2D1QA 1V60A 5BSTA 2YWBA 4RMNA 4RVOA 2E8FA 4BBYA 4LF4C 1YJ7A 3GPCA 2D1SA 1FUGA 4PZPA 4GKKC 1JOSA 4DR4C 2ZM6C 1P4EA 4KTVA 4XX2A 2QVXX 4JYAC 5K8FA 4RLQA 4KHPC 2UU9C 5T8SA 4DV6C 5DV9A 4BSZA 1XHJA 5BSWA 3UZ0A 1RG9A 5E7QA 4GKJC 4IR7A 3GKUA 4KTTA 1N34C 1T5DX 1N33C 3I07A 2BJOA 2UXDC 1XMQC 4X65C 5BSUA 4B3SC 2ZZMA 2YX1A 4DV5C 4PHTA 3TUFA 2KZFA 4LF5C 3CQ3A 2E7GA 2D7VA 3IMLA 3DHVA 5IT9D 4K0KC 3T1HC 4DR3C 4JI7C 4GS5A 1N2FA 5BSVA 3C5EA 2ASBA 3NYQA 2UXCC 3LNOA 2VQEC 2AYAA 1QWIA 2M5HA 4DV4C 1XMOC 3A25A 3A9VA 4JI3C 2UUCC 2VZEA 4ZJZA 4DV7C 1HNWC 3NYRA 2YCBA 3O2EA 4B3RC 1FLOA 4G36A 1RY2A 3NPDA 4D56A 1WCJA 4ZLPA 4JV5C 1XNQC 2Z51A 4X64C 4B3TC 3LUSA 3N54B 5IWAC 2WD9A 4RM3A 4LFAC 2P02A 1N32C 1MXCA 1USPB 2P2MA 3R9XA 3RG2A 4WS9A 1NY8A 2CY1A 5CZXA 1M6XC 2PT7G 2MM9A 2EGTA 4MH4A 2OO4A 4OX9C 4L7IA 4U5YD 1J5EC 1PA4A 3IEUA 1UKKA 5AE2A 4BC9A 1QM4A 1ML8A 4I9GA 4BCAA 4JI0C 3EERA 4OYCA 1XRBA 4WV3A 4LFCC 1KKGA 2P2BA 3NI2A 4NXMC 3S82A 4X62C 1MD9A 3UOWA 2JNVA 2Y27A 2BH1X 4GXRA 1USPA 4PUIA 1XRAA 4BC7A 4DR1C 5BUSA 3GR0A 3OTOC 3IPLA 2ONFA 1PG4A 1O9TA 3CJEA 2UUAC 4G1IA 4DR7C 3E7WA 4D4IA
chains in the Genus database with same CATH topology
3UX2A 3CQ3A 1XHJA 1TH5A 1WCJA 2CU6A 2M5HA 1UWDA 3CQ1A 3CQ2A 1VEHA 2M5OA 2Z51A 2JNVA 3UX3A 3LNOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3UX2 A;  3CQ3 A;  1XHJ A;  1TH5 A;  1WCJ A;  2CU6 A;  2M5H A;  1UWD A;  3CQ1 A;  3CQ2 A;  1VEH A;  2M5O A;  2Z51 A;  2JNV A;  3UX3 A;  3LNO A; 
#chains in the Genus database with same CATH topology
 3JAM D;  2QVZ X;  3KXW A;  5A19 A;  3ETO A;  2OPL A;  4MTN A;  4LF6 C;  1ZB8 A;  4DUY C;  1ZB9 A;  4LE5 A;  4LF9 C;  2WP0 C;  1PG3 A;  1XS3 A;  5GTD A;  3EQ6 A;  4DR2 C;  5BUR A;  4DCS A;  3I08 A;  4R0M A;  2KDN A;  1HNX C;  5LMU C;  2CU6 A;  4D4G A;  4JM1 A;  4R1L A;  4RVN A;  4DCU A;  4DV3 C;  3PES A;  5FLX D;  5LMN C;  2VSQ A;  4DCT A;  4JI1 C;  2Y4O A;  5AE3 A;  4FTF A;  4AQY C;  3UX2 A;  3VNQ A;  3CQ1 A;  1P4E C;  1PU1 A;  2D1R A;  3CW9 A;  1TH5 A;  5H9U A;  2MMA B;  4L4Q A;  2CXC A;  2DHM A;  2DPL A;  2QL8 A;  2V7B A;  1O93 A;  3LGX A;  5A1G A;  1IBL C;  3AF6 A;  2Y4N A;  2QVY X;  2E0G A;  3L95 X;  3LNV A;  4HPV A;  4LF7 C;  3B7W A;  2OBV A;  2F4V C;  4NOZ A;  1MKY A;  4DV0 C;  5BSR A;  4B3M C;  4G37 A;  4FUQ A;  4DR6 C;  4DG9 A;  4YHH C;  1T5H X;  5IFI A;  1O92 A;  4JI2 C;  1IB8 A;  1I94 C;  4D57 A;  1V25 A;  1ULT A;  1VLA A;  3T1Y C;  3UX3 A;  1XRC A;  2OPL B;  5BUQ A;  3CW8 X;  4DV1 C;  1O90 A;  2E8C A;  3DAY A;  5JRH A;  4I9F A;  3A26 A;  2P20 A;  2PN2 A;  4YY3 C;  1EGA A;  2P2J A;  4LFB C;  3E7X A;  1LQL A;  5ADZ A;  2HHH C;  3N2Q A;  4R1M A;  5KYT A;  4JI5 C;  5KYV A;  4FUT A;  3GR1 A;  4K0B A;  4JI6 C;  2HJG A;  4NDN A;  4GXQ A;  2D28 C;  3DLP X;  5A2Q D;  3R9W A;  2XR1 A;  2UXB C;  2DYJ A;  5KEI A;  4ODJ A;  5A1I A;  2JMP A;  4DV2 C;  4OXI A;  2P2F A;  2NCL A;  5AE1 A;  3H2T A;  2ATW A;  4RM2 A;  2ZZN A;  1GPM A;  1N36 C;  4DG8 A;  1WF3 A;  1XNR C;  3FCC A;  2E5L C;  3J81 D;  4DR5 C;  1HH2 P;  5CZV A;  3PBK A;  3CQ2 A;  3AY0 A;  1LCI A;  2P2Q A;  4JI8 C;  1M6X A;  1V26 A;  2D27 A;  1WH9 A;  1IBK C;  2E8E A;  4ISB A;  5T8T A;  1UWD A;  2M5O A;  3TDE A;  1HR0 C;  4PUH A;  3L8C A;  1MDB A;  4IZ6 A;  1AMU A;  1MXA A;  2YWC A;  1HNZ C;  3A9U A;  3K6R A;  3A4I A;  3IEV A;  3TR3 A;  3PRO C;  1MDF A;  3UEB A;  5BSM A;  3AF5 A;  4LF8 C;  2QW0 X;  4DCV A;  4DUZ C;  2D1T A;  3R44 A;  1NYE A;  1FJG C;  4EAT A;  3SO4 A;  4PUG A;  1MXB A;  3VNR A;  3VNS A;  3LAX A;  4JI4 C;  5BR8 C;  1VEH A;  1P7L A;  5K85 A;  4X66 C;  1BA3 A;  3ETC A;  4TPS B;  4L2Z A;  3RV2 A;  1IBM C;  3FCE A;  4NXN C;  3G7S A;  3TQI A;  2UUB C;  4PRO C;  2MCQ A;  4RLF A;  1K0R A;  2VQF C;  2KZ0 A;  3J80 D;  5LCI A;  2PRO A;  1L2F A;  2D1Q A;  1V60 A;  5BST A;  2YWB A;  4RMN A;  4RVO A;  2E8F A;  4BBY A;  4LF4 C;  1YJ7 A;  3GPC A;  2D1S A;  1FUG A;  4PZP A;  4GKK C;  1JOS A;  4DR4 C;  2ZM6 C;  1P4E A;  4KTV A;  4XX2 A;  2QVX X;  4JYA C;  5K8F A;  4RLQ A;  4KHP C;  2UU9 C;  5T8S A;  4DV6 C;  5DV9 A;  4BSZ A;  1XHJ A;  5BSW A;  3UZ0 A;  1RG9 A;  5E7Q A;  4GKJ C;  4IR7 A;  3GKU A;  4KTT A;  1N34 C;  1T5D X;  1N33 C;  3I07 A;  2BJO A;  2UXD C;  1XMQ C;  4X65 C;  5BSU A;  4B3S C;  2ZZM A;  2YX1 A;  4DV5 C;  4PHT A;  3TUF A;  2KZF A;  4LF5 C;  3CQ3 A;  2E7G A;  2D7V A;  3IML A;  3DHV A;  5IT9 D;  4K0K C;  3T1H C;  4DR3 C;  4JI7 C;  4GS5 A;  1N2F A;  5BSV A;  3C5E A;  2ASB A;  3NYQ A;  2UXC C;  3LNO A;  2VQE C;  2AYA A;  1QWI A;  2M5H A;  4DV4 C;  1XMO C;  3A25 A;  3A9V A;  4JI3 C;  2UUC C;  2VZE A;  4ZJZ A;  4DV7 C;  1HNW C;  3NYR A;  2YCB A;  3O2E A;  4B3R C;  1FLO A;  4G36 A;  1RY2 A;  3NPD A;  4D56 A;  1WCJ A;  4ZLP A;  4JV5 C;  1XNQ C;  2Z51 A;  4X64 C;  4B3T C;  3LUS A;  3N54 B;  5IWA C;  2WD9 A;  4RM3 A;  4LFA C;  2P02 A;  1N32 C;  1MXC A;  1USP B;  2P2M A;  3R9X A;  3RG2 A;  4WS9 A;  1NY8 A;  2CY1 A;  5CZX A;  1M6X C;  2PT7 G;  2MM9 A;  2EGT A;  4MH4 A;  2OO4 A;  4OX9 C;  4L7I A;  4U5Y D;  1J5E C;  1PA4 A;  3IEU A;  1UKK A;  5AE2 A;  4BC9 A;  1QM4 A;  1ML8 A;  4I9G A;  4BCA A;  4JI0 C;  3EER A;  4OYC A;  1XRB A;  4WV3 A;  4LFC C;  1KKG A;  2P2B A;  3NI2 A;  4NXM C;  3S82 A;  4X62 C;  1MD9 A;  3UOW A;  2JNV A;  2Y27 A;  2BH1 X;  4GXR A;  1USP A;  4PUI A;  1XRA A;  4BC7 A;  4DR1 C;  5BUS A;  3GR0 A;  3OTO C;  3IPL A;  2ONF A;  1PG4 A;  1O9T A;  3CJE A;  2UUA C;  4G1I A;  4DR7 C;  3E7W A;  4D4I A; 
#chains in the Genus database with same CATH homology
 3UX2 A;  3CQ3 A;  1XHJ A;  1TH5 A;  1WCJ A;  2CU6 A;  2M5H A;  1UWD A;  3CQ1 A;  3CQ2 A;  1VEH A;  2M5O A;  2Z51 A;  2JNV A;  3UX3 A;  3LNO A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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