3TR3A

Structure of a bola protein homologue from coxiella burnetii
Total Genus 23
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
23
sequence length
78
structure length
78
Chain Sequence
MVTTHDIKQWIETGLSESRVISAEGDGHHFEAVVLCPTFEGQTALTRHRLVYNALGSHMQSDIHALSLKTYTPDEYER
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural genomics for drug design against the pathogen Coxiella burnetii.
pubmed doi rcsb
molecule tags Unknown function
source organism Coxiella burnetii
molecule keywords BolA
total genus 23
structure length 78
sequence length 78
chains with identical sequence B
ec nomenclature
pdb deposition date 2011-09-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01722 BolA BolA-like protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.300.90 Alpha Beta 2-Layer Sandwich GMP Synthetase; Chain A, domain 3 BolA-like 3tr3A00
2MMAB 2NCLA 3O2EA 2MCQA 2DHMA 4PUHA 1XS3A 5LCIA 3TR3A 2KDNA 2KZ0A 4PUGA 4PUIA 2MM9A 1NY8A 1V60A
chains in the Genus database with same CATH superfamily
4B3RC 2QVZX 3EQ6A 1VEHA 2YCBA 2D1QA 4MTNA 4JV5C 3GR0A 1HNWC 4HPVA 1MKYA 3I08A 2YX1A 4DCTA 3LNOA 5DV9A 1ZB9A 5IFIA 4DV0C 1QWIA 4JI5C 2M5OA 4DV5C 3L8CA 5GTDA 2ZM6C 1ULTA 1J5EC 4WS9A 1PG3A 2V7BA 2VZEA 4JYAC 4OYCA 1O92A 2XR1A 3LUSA 2E0GA 3O2EA 4DUZC 4YY3C 2UXBC 3TR3A 4FUTA 1PA4A 3R44A 1AMUA 4JI1C 4LF6C 4BSZA 1HNZC 4DR4C 1O90A 2Y4OA 4X62C 1USPB 1MXBA 5K8FA 4BBYA 1ML8A 5BURA 2CXCA 4IZ6A 3NPDA 3CQ1A 4LE5A 5JRHA 1VLAA 2UXDC 4BC9A 1PG4A 4TPSB 1GPMA 3CW9A 2D28C 1TH5A 1P4EA 1HH2P 2ZZNA 1XNRC 4RM2A 1XRBA 3UOWA 3VNRA 2UUBC 4DV6C 2DHMA 5FLXD 2D1TA 1BA3A 2CY1A 4I9GA 1O93A 2DYJA 2PROA 4G36A 4FUQA 5A1GA 5ADZA 5E7QA 4KHPC 3DAYA 3E7WA 3PROC 4DCSA 2JMPA 2F4VC 2EGTA 4EATA 1MDBA 3GR1A 1N33C 2NCLA 4RM3A 3G7SA 2M5HA 2CU6A 3GPCA 4DV1C 5CZVA 4JI4C 3S82A 2D1SA 1I94C 2QW0X 1UWDA 2MM9A 2P20A 4PUIA 1T5HX 4DG8A 4NXMC 2OPLA 2OO4A 4RLFA 4JI0C 2UUAC 4JI2C 4PUGA 4L4QA 1FJGC 1M6XA 2E5LC 5CZXA 3B7WA 3IPLA 5LMNC 4R0MA 1WH9A 4PUHA 2Y4NA 3UX2A 1NYEA 2D1RA 2JNVA 4JM1A 4KTTA 3N54B 4KTVA 5IWAC 4LFBC 1FUGA 3ETCA 4LF5C 4MH4A 4ODJA 3UX3A 4DV4C 4ZLPA 1PU1A 3R9WA 3H2TA 4I9FA 4XX2A 4LFAC 2KZ0A 5BSVA 1XMQC 4D4IA 1XMOC 1NY8A 1V60A 4DCVA 4K0KC 3A25A 2P02A 4DR2C 4LF4C 3L95X 5BUQA 4JI8C 4OX9C 2P2BA 5BUSA 1LCIA 2E8CA 5KEIA 4L7IA 1HNXC 4DR1C 5K85A 1IBLC 1RG9A 2Z51A 3AF5A 3RV2A 2QVYX 4RVOA 2ZZMA 4NDNA 3OTOC 3PBKA 3DLPX 3TDEA 5LCIA 3NYRA 3T1HC 5LMUC 3EERA 3KXWA 4B3TC 3RG2A 4D57A 4DR5C 2E8EA 2HJGA 4DV3C 2P2FA 5T8SA 3UEBA 4DV2C 2P2QA 4JI3C 3A4IA 2ASBA 3NYQA 4PHTA 1KKGA 3LAXA 3I07A 4D4GA 3R9XA 1T5DX 4L2ZA 2KDNA 1UKKA 3LGXA 1QM4A 3VNSA 5A2QD 1N36C 1IB8A 1MD9A 2DPLA 1P7LA 1FLOA 3E7XA 1L2FA 2ONFA 4ISBA 4IR7A 4LF7C 1P4EC 1JOSA 4D56A 3CW8X 4K0BA 4YHHC 5KYTA 3CQ3A 1ZB8A 1XS3A 2E8FA 4RVNA 5BSMA 3NI2A 2UUCC 3AF6A 2VSQA 3IEUA 4NXNC 2P2MA 2HHHC 4R1LA 1USPA 3ETOA 1N32C 5AE2A 4JI7C 3FCCA 1HR0C 4G37A 4DR6C 2ATWA 5AE1A 4GS5A 3SO4A 4RMNA 3C5EA 2E7GA 2P2JA 4DR7C 2KZFA 4BC7A 2Y27A 1WCJA 3UZ0A 2WP0C 4RLQA 2WD9A 1MXAA 3TUFA 2AYAA 4GKJC 2QVXX 1IBMC 2OPLB 3LNVA 3J80D 3GKUA 1M6XC 1YJ7A 2VQEC 3A26A 4G1IA 4GXQA 4AQYC 3TQIA 2OBVA 5KYVA 3T1YC 2UU9C 5A19A 2PT7G 4DV7C 3CJEA 1EGAA 5IT9D 1V25A 1WF3A 2PN2A 2QL8A 1MXCA 1LQLA 2BH1X 2YWBA 3N2QA 4LF9C 4LFCC 5BSUA 3A9VA 5A1IA 3J81D 4JI6C 3FCEA 2D27A 3K6RA 2YWCA 1XNQC 4DG9A 1K0RA 2MCQA 5T8TA 4X64C 3PESA 4U5YD 5BSRA 4NOZA 1XHJA 3JAMD 3AY0A 3IEVA 1V26A 4GXRA 4X66C 2MMAB 3IMLA 4GKKC 2VQFC 4BCAA 5BSTA 2BJOA 5BR8C 4DR3C 4WV3A 5BSWA 1IBKC 4ZJZA 1O9TA 4B3MC 4LF8C 3DHVA 4X65C 4PZPA 3VNQA 2D7VA 4PROC 4R1MA 3CQ2A 5AE3A 1N34C 1XRCA 3A9UA 1MDFA 5H9UA 4DUYC 4OXIA 1N2FA 1RY2A 2UXCC 4B3SC 4DCUA 1XRAA 4FTFA
chains in the Genus database with same CATH topology
2MMAB 2NCLA 3O2EA 2MCQA 2DHMA 4PUHA 1XS3A 5LCIA 3TR3A 2KDNA 2KZ0A 4PUGA 4PUIA 2MM9A 1NY8A 1V60A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2MMA B;  2NCL A;  3O2E A;  2MCQ A;  2DHM A;  4PUH A;  1XS3 A;  5LCI A;  3TR3 A;  2KDN A;  2KZ0 A;  4PUG A;  4PUI A;  2MM9 A;  1NY8 A;  1V60 A; 
#chains in the Genus database with same CATH topology
 4B3R C;  2QVZ X;  3EQ6 A;  1VEH A;  2YCB A;  2D1Q A;  4MTN A;  4JV5 C;  3GR0 A;  1HNW C;  4HPV A;  1MKY A;  3I08 A;  2YX1 A;  4DCT A;  3LNO A;  5DV9 A;  1ZB9 A;  5IFI A;  4DV0 C;  1QWI A;  4JI5 C;  2M5O A;  4DV5 C;  3L8C A;  5GTD A;  2ZM6 C;  1ULT A;  1J5E C;  4WS9 A;  1PG3 A;  2V7B A;  2VZE A;  4JYA C;  4OYC A;  1O92 A;  2XR1 A;  3LUS A;  2E0G A;  3O2E A;  4DUZ C;  4YY3 C;  2UXB C;  3TR3 A;  4FUT A;  1PA4 A;  3R44 A;  1AMU A;  4JI1 C;  4LF6 C;  4BSZ A;  1HNZ C;  4DR4 C;  1O90 A;  2Y4O A;  4X62 C;  1USP B;  1MXB A;  5K8F A;  4BBY A;  1ML8 A;  5BUR A;  2CXC A;  4IZ6 A;  3NPD A;  3CQ1 A;  4LE5 A;  5JRH A;  1VLA A;  2UXD C;  4BC9 A;  1PG4 A;  4TPS B;  1GPM A;  3CW9 A;  2D28 C;  1TH5 A;  1P4E A;  1HH2 P;  2ZZN A;  1XNR C;  4RM2 A;  1XRB A;  3UOW A;  3VNR A;  2UUB C;  4DV6 C;  2DHM A;  5FLX D;  2D1T A;  1BA3 A;  2CY1 A;  4I9G A;  1O93 A;  2DYJ A;  2PRO A;  4G36 A;  4FUQ A;  5A1G A;  5ADZ A;  5E7Q A;  4KHP C;  3DAY A;  3E7W A;  3PRO C;  4DCS A;  2JMP A;  2F4V C;  2EGT A;  4EAT A;  1MDB A;  3GR1 A;  1N33 C;  2NCL A;  4RM3 A;  3G7S A;  2M5H A;  2CU6 A;  3GPC A;  4DV1 C;  5CZV A;  4JI4 C;  3S82 A;  2D1S A;  1I94 C;  2QW0 X;  1UWD A;  2MM9 A;  2P20 A;  4PUI A;  1T5H X;  4DG8 A;  4NXM C;  2OPL A;  2OO4 A;  4RLF A;  4JI0 C;  2UUA C;  4JI2 C;  4PUG A;  4L4Q A;  1FJG C;  1M6X A;  2E5L C;  5CZX A;  3B7W A;  3IPL A;  5LMN C;  4R0M A;  1WH9 A;  4PUH A;  2Y4N A;  3UX2 A;  1NYE A;  2D1R A;  2JNV A;  4JM1 A;  4KTT A;  3N54 B;  4KTV A;  5IWA C;  4LFB C;  1FUG A;  3ETC A;  4LF5 C;  4MH4 A;  4ODJ A;  3UX3 A;  4DV4 C;  4ZLP A;  1PU1 A;  3R9W A;  3H2T A;  4I9F A;  4XX2 A;  4LFA C;  2KZ0 A;  5BSV A;  1XMQ C;  4D4I A;  1XMO C;  1NY8 A;  1V60 A;  4DCV A;  4K0K C;  3A25 A;  2P02 A;  4DR2 C;  4LF4 C;  3L95 X;  5BUQ A;  4JI8 C;  4OX9 C;  2P2B A;  5BUS A;  1LCI A;  2E8C A;  5KEI A;  4L7I A;  1HNX C;  4DR1 C;  5K85 A;  1IBL C;  1RG9 A;  2Z51 A;  3AF5 A;  3RV2 A;  2QVY X;  4RVO A;  2ZZM A;  4NDN A;  3OTO C;  3PBK A;  3DLP X;  3TDE A;  5LCI A;  3NYR A;  3T1H C;  5LMU C;  3EER A;  3KXW A;  4B3T C;  3RG2 A;  4D57 A;  4DR5 C;  2E8E A;  2HJG A;  4DV3 C;  2P2F A;  5T8S A;  3UEB A;  4DV2 C;  2P2Q A;  4JI3 C;  3A4I A;  2ASB A;  3NYQ A;  4PHT A;  1KKG A;  3LAX A;  3I07 A;  4D4G A;  3R9X A;  1T5D X;  4L2Z A;  2KDN A;  1UKK A;  3LGX A;  1QM4 A;  3VNS A;  5A2Q D;  1N36 C;  1IB8 A;  1MD9 A;  2DPL A;  1P7L A;  1FLO A;  3E7X A;  1L2F A;  2ONF A;  4ISB A;  4IR7 A;  4LF7 C;  1P4E C;  1JOS A;  4D56 A;  3CW8 X;  4K0B A;  4YHH C;  5KYT A;  3CQ3 A;  1ZB8 A;  1XS3 A;  2E8F A;  4RVN A;  5BSM A;  3NI2 A;  2UUC C;  3AF6 A;  2VSQ A;  3IEU A;  4NXN C;  2P2M A;  2HHH C;  4R1L A;  1USP A;  3ETO A;  1N32 C;  5AE2 A;  4JI7 C;  3FCC A;  1HR0 C;  4G37 A;  4DR6 C;  2ATW A;  5AE1 A;  4GS5 A;  3SO4 A;  4RMN A;  3C5E A;  2E7G A;  2P2J A;  4DR7 C;  2KZF A;  4BC7 A;  2Y27 A;  1WCJ A;  3UZ0 A;  2WP0 C;  4RLQ A;  2WD9 A;  1MXA A;  3TUF A;  2AYA A;  4GKJ C;  2QVX X;  1IBM C;  2OPL B;  3LNV A;  3J80 D;  3GKU A;  1M6X C;  1YJ7 A;  2VQE C;  3A26 A;  4G1I A;  4GXQ A;  4AQY C;  3TQI A;  2OBV A;  5KYV A;  3T1Y C;  2UU9 C;  5A19 A;  2PT7 G;  4DV7 C;  3CJE A;  1EGA A;  5IT9 D;  1V25 A;  1WF3 A;  2PN2 A;  2QL8 A;  1MXC A;  1LQL A;  2BH1 X;  2YWB A;  3N2Q A;  4LF9 C;  4LFC C;  5BSU A;  3A9V A;  5A1I A;  3J81 D;  4JI6 C;  3FCE A;  2D27 A;  3K6R A;  2YWC A;  1XNQ C;  4DG9 A;  1K0R A;  2MCQ A;  5T8T A;  4X64 C;  3PES A;  4U5Y D;  5BSR A;  4NOZ A;  1XHJ A;  3JAM D;  3AY0 A;  3IEV A;  1V26 A;  4GXR A;  4X66 C;  2MMA B;  3IML A;  4GKK C;  2VQF C;  4BCA A;  5BST A;  2BJO A;  5BR8 C;  4DR3 C;  4WV3 A;  5BSW A;  1IBK C;  4ZJZ A;  1O9T A;  4B3M C;  4LF8 C;  3DHV A;  4X65 C;  4PZP A;  3VNQ A;  2D7V A;  4PRO C;  4R1M A;  3CQ2 A;  5AE3 A;  1N34 C;  1XRC A;  3A9U A;  1MDF A;  5H9U A;  4DUY C;  4OXI A;  1N2F A;  1RY2 A;  2UXC C;  4B3S C;  4DCU A;  1XRA A;  4FTF A; 
#chains in the Genus database with same CATH homology
 2MMA B;  2NCL A;  3O2E A;  2MCQ A;  2DHM A;  4PUH A;  1XS3 A;  5LCI A;  3TR3 A;  2KDN A;  2KZ0 A;  4PUG A;  4PUI A;  2MM9 A;  1NY8 A;  1V60 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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