4PUIA

Bola domain of sufe1 from arabidopsis thaliana
Total Genus 30

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
30
sequence length
95
structure length
85
Chain Sequence
ALGSRGMRIREKLEKELDPVELEVEDVSYQHADDGETHFNLRIVSDAFQGKSLVKRHRLIYDLLQDELKSGLHALSIVAKTPAEV

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Protein binding
source organism Arabidopsis thaliana
publication title Structural and Spectroscopic Insights into BolA-Glutaredoxin Complexes.
pubmed doi rcsb
molecule keywords SufE-like protein, chloroplastic
total genus 30
structure length 85
sequence length 95
chains with identical sequence B
ec nomenclature
pdb deposition date 2014-03-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01722 BolA BolA-like protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.300.90 Alpha Beta 2-Layer Sandwich GMP Synthetase; Chain A, domain 3 BolA-like 4puiA01
1NY8A 5LCIA 1XS3A 2DHMA 4PUIA 2MM9A 3O2EA 1V60A 4PUGA 3TR3A 2KZ0A 2MMAB 2NCLA 4PUHA 2KDNA 2MCQA
chains in the Genus database with same CATH superfamily
2D1SA 2OPLB 3CW9A 4G37A 5CZXA 2ATWA 4IR7A 3LAXA 1ML8A 1N2FA 5BSVA 2CU6A 4BCAA 1WCJA 5IFIA 4ODJA 2VZEA 3DAYA 1V25A 1UKKA 4LF5C 3VNSA 1MXCA 4DR2C 2CY1A 2MCQA 1N33C 3NPDA 3FCCA 1V26A 4HPVA 1V60A 5K85A 1XRAA 2VSQA 4ISBA 4R1LA 4RLFA 2NCLA 1LCIA 4DV2C 4LFCC 4DV0C 4FTFA 4PUIA 3A9VA 4B3MC 5DV9A 1N36C 1MKYA 4LFAC 3ETCA 1XMQC 2DPLA 4PHTA 2E8FA 1FUGA 2E7GA 4DR3C 3L95X 4LF6C 4FUTA 5LMNC 2HHHC 3IEVA 4JV5C 4JI3C 5KEIA 3A26A 1EGAA 2WD9A 5BSUA 3E7WA 4EATA 2P20A 4BBYA 1HNWC 1O92A 2BJOA 3UX3A 3I07A 1YJ7A 4FUQA 4I9GA 3R9WA 1K0RA 5CZVA 3LNVA 4KHPC 2VQFC 1GPMA 4I9FA 4DV5C 5KYVA 1P7LA 3GKUA 4PZPA 4B3TC 3IPLA 1MDFA 1XNQC 3GPCA 1USPB 3VNRA 2P2FA 2UU9C 5BSWA 2AYAA 2PN2A 4YHHC 1PA4A 5LMUC 4GXQA 4PROC 1M6XA 2KZ0A 4G1IA 4R0MA 2D27A 5LCIA 3N2QA 3PROC 4D57A 2CXCA 5H9UA 1IBLC 4DUZC 2YWCA 3SO4A 3G7SA 5AE2A 2OPLA 2OBVA 2YWBA 4YY3C 1N32C 1RY2A 4DV1C 3TDEA 1ULTA 5T8TA 1O9TA 2Z51A 1AMUA 1P4EA 2UXBC 4DV3C 1XMOC 2KZFA 1PG3A 4MTNA 3R44A 1XRCA 1BA3A 4LF7C 2Y4OA 3NI2A 4KTVA 4GKJC 4OYCA 5ADZA 2UUCC 4JI7C 3T1YC 1XNRC 2HJGA 5JRHA 4JYAC 4DUYC 2P2BA 4XX2A 2E8EA 1ZB8A 1O93A 1QWIA 1XS3A 2D1QA 2Y27A 5BUSA 4K0BA 2JNVA 1M6XC 2Y4NA 4L4QA 4PUGA 1XHJA 2E0GA 1O90A 4B3SC 3UX2A 2P2MA 4IZ6A 2VQEC 4ZLPA 1WH9A 4L2ZA 2MMAB 4BC9A 5AE1A 4U5YD 4GKKC 4X64C 3UEBA 3A25A 4DCUA 1KKGA 2QVZX 4DCTA 1P4EC 5IWAC 5BUQA 4OX9C 1I94C 2ZZNA 4JI6C 2P02A 1NY8A 4WV3A 3L8CA 4WS9A 3TQIA 2E5LC 4B3RC 3H2TA 1HH2P 5BR8C 2DHMA 2QVXX 2UUAC 3CW8X 3K6RA 4RLQA 3GR0A 3JAMD 2UXCC 3OTOC 1QM4A 2P2QA 3NYQA 4DV7C 2D1RA 2QW0X 3UOWA 2YX1A 3S82A 5GTDA 1MDBA 1N34C 2ONFA 4X62C 1NYEA 3EQ6A 1VLAA 4DV6C 3RV2A 4GS5A 1USPA 3A4IA 3AY0A 2UUBC 4KTTA 3EERA 4GXRA 2WP0C 3CJEA 4JI2C 2D1TA 4LF8C 3UZ0A 4BC7A 1HNZC 4DR7C 3LNOA 2EGTA 1TH5A 4NOZA 4RVOA 1MXBA 2M5OA 3RG2A 1IB8A 1T5HX 5A1IA 4DCSA 4JI1C 3N54B 1HNXC 1MD9A 4BSZA 4ZJZA 5A1GA 4DCVA 2BH1X 4DG8A 4RVNA 5BSTA 2PROA 1JOSA 5IT9D 4DG9A 1PU1A 4DR4C 3DLPX 4RMNA 2QL8A 2PT7G 3LUSA 2XR1A 4NXNC 2UXDC 3AF6A 5E7QA 4TPSB 3DHVA 3NYRA 3LGXA 3TR3A 2DYJA 4DV4C 3IEUA 2JMPA 1L2FA 4D4IA 2P2JA 3R9XA 3E7XA 1ZB9A 2D28C 4JI0C 3CQ2A 2ZZMA 4G36A 3CQ1A 5KYTA 4LFBC 3VNQA 2QVYX 5BSRA 3I08A 2M5HA 5BURA 4JM1A 4LF4C 2OO4A 3B7WA 5A19A 2ZM6C 1T5DX 1IBKC 2KDNA 3KXWA 4OXIA 4X65C 2YCBA 3C5EA 4D56A 1FLOA 4LF9C 2E8CA 4DR6C 4X66C 1UWDA 4K0KC 2F4VC 4RM2A 3PESA 3CQ3A 3PBKA 3GR1A 5BSMA 4PUHA 4NXMC 4D4GA 3IMLA 2ASBA 3AF5A 1IBMC 2V7BA 3TUFA 4DR1C 4AQYC 1RG9A 1MXAA 4LE5A 5K8FA 4JI5C 3O2EA 1HR0C 5FLXD 4R1MA 1WF3A 1PG4A 3A9UA 3FCEA 3J81D 5A2QD 1XRBA 5T8SA 4JI8C 1FJGC 4L7IA 2MM9A 3J80D 4DR5C 1J5EC 3T1HC 4RM3A 1VEHA 3ETOA 5AE3A 4NDNA 4MH4A 4JI4C 2D7VA 1LQLA
chains in the Genus database with same CATH topology
1NY8A 5LCIA 1XS3A 2DHMA 4PUIA 2MM9A 3O2EA 1V60A 4PUGA 3TR3A 2KZ0A 2MMAB 2NCLA 4PUHA 2KDNA 2MCQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1NY8 A;  5LCI A;  1XS3 A;  2DHM A;  4PUI A;  2MM9 A;  3O2E A;  1V60 A;  4PUG A;  3TR3 A;  2KZ0 A;  2MMA B;  2NCL A;  4PUH A;  2KDN A;  2MCQ A; 
#chains in the Genus database with same CATH topology
 2D1S A;  2OPL B;  3CW9 A;  4G37 A;  5CZX A;  2ATW A;  4IR7 A;  3LAX A;  1ML8 A;  1N2F A;  5BSV A;  2CU6 A;  4BCA A;  1WCJ A;  5IFI A;  4ODJ A;  2VZE A;  3DAY A;  1V25 A;  1UKK A;  4LF5 C;  3VNS A;  1MXC A;  4DR2 C;  2CY1 A;  2MCQ A;  1N33 C;  3NPD A;  3FCC A;  1V26 A;  4HPV A;  1V60 A;  5K85 A;  1XRA A;  2VSQ A;  4ISB A;  4R1L A;  4RLF A;  2NCL A;  1LCI A;  4DV2 C;  4LFC C;  4DV0 C;  4FTF A;  4PUI A;  3A9V A;  4B3M C;  5DV9 A;  1N36 C;  1MKY A;  4LFA C;  3ETC A;  1XMQ C;  2DPL A;  4PHT A;  2E8F A;  1FUG A;  2E7G A;  4DR3 C;  3L95 X;  4LF6 C;  4FUT A;  5LMN C;  2HHH C;  3IEV A;  4JV5 C;  4JI3 C;  5KEI A;  3A26 A;  1EGA A;  2WD9 A;  5BSU A;  3E7W A;  4EAT A;  2P20 A;  4BBY A;  1HNW C;  1O92 A;  2BJO A;  3UX3 A;  3I07 A;  1YJ7 A;  4FUQ A;  4I9G A;  3R9W A;  1K0R A;  5CZV A;  3LNV A;  4KHP C;  2VQF C;  1GPM A;  4I9F A;  4DV5 C;  5KYV A;  1P7L A;  3GKU A;  4PZP A;  4B3T C;  3IPL A;  1MDF A;  1XNQ C;  3GPC A;  1USP B;  3VNR A;  2P2F A;  2UU9 C;  5BSW A;  2AYA A;  2PN2 A;  4YHH C;  1PA4 A;  5LMU C;  4GXQ A;  4PRO C;  1M6X A;  2KZ0 A;  4G1I A;  4R0M A;  2D27 A;  5LCI A;  3N2Q A;  3PRO C;  4D57 A;  2CXC A;  5H9U A;  1IBL C;  4DUZ C;  2YWC A;  3SO4 A;  3G7S A;  5AE2 A;  2OPL A;  2OBV A;  2YWB A;  4YY3 C;  1N32 C;  1RY2 A;  4DV1 C;  3TDE A;  1ULT A;  5T8T A;  1O9T A;  2Z51 A;  1AMU A;  1P4E A;  2UXB C;  4DV3 C;  1XMO C;  2KZF A;  1PG3 A;  4MTN A;  3R44 A;  1XRC A;  1BA3 A;  4LF7 C;  2Y4O A;  3NI2 A;  4KTV A;  4GKJ C;  4OYC A;  5ADZ A;  2UUC C;  4JI7 C;  3T1Y C;  1XNR C;  2HJG A;  5JRH A;  4JYA C;  4DUY C;  2P2B A;  4XX2 A;  2E8E A;  1ZB8 A;  1O93 A;  1QWI A;  1XS3 A;  2D1Q A;  2Y27 A;  5BUS A;  4K0B A;  2JNV A;  1M6X C;  2Y4N A;  4L4Q A;  4PUG A;  1XHJ A;  2E0G A;  1O90 A;  4B3S C;  3UX2 A;  2P2M A;  4IZ6 A;  2VQE C;  4ZLP A;  1WH9 A;  4L2Z A;  2MMA B;  4BC9 A;  5AE1 A;  4U5Y D;  4GKK C;  4X64 C;  3UEB A;  3A25 A;  4DCU A;  1KKG A;  2QVZ X;  4DCT A;  1P4E C;  5IWA C;  5BUQ A;  4OX9 C;  1I94 C;  2ZZN A;  4JI6 C;  2P02 A;  1NY8 A;  4WV3 A;  3L8C A;  4WS9 A;  3TQI A;  2E5L C;  4B3R C;  3H2T A;  1HH2 P;  5BR8 C;  2DHM A;  2QVX X;  2UUA C;  3CW8 X;  3K6R A;  4RLQ A;  3GR0 A;  3JAM D;  2UXC C;  3OTO C;  1QM4 A;  2P2Q A;  3NYQ A;  4DV7 C;  2D1R A;  2QW0 X;  3UOW A;  2YX1 A;  3S82 A;  5GTD A;  1MDB A;  1N34 C;  2ONF A;  4X62 C;  1NYE A;  3EQ6 A;  1VLA A;  4DV6 C;  3RV2 A;  4GS5 A;  1USP A;  3A4I A;  3AY0 A;  2UUB C;  4KTT A;  3EER A;  4GXR A;  2WP0 C;  3CJE A;  4JI2 C;  2D1T A;  4LF8 C;  3UZ0 A;  4BC7 A;  1HNZ C;  4DR7 C;  3LNO A;  2EGT A;  1TH5 A;  4NOZ A;  4RVO A;  1MXB A;  2M5O A;  3RG2 A;  1IB8 A;  1T5H X;  5A1I A;  4DCS A;  4JI1 C;  3N54 B;  1HNX C;  1MD9 A;  4BSZ A;  4ZJZ A;  5A1G A;  4DCV A;  2BH1 X;  4DG8 A;  4RVN A;  5BST A;  2PRO A;  1JOS A;  5IT9 D;  4DG9 A;  1PU1 A;  4DR4 C;  3DLP X;  4RMN A;  2QL8 A;  2PT7 G;  3LUS A;  2XR1 A;  4NXN C;  2UXD C;  3AF6 A;  5E7Q A;  4TPS B;  3DHV A;  3NYR A;  3LGX A;  3TR3 A;  2DYJ A;  4DV4 C;  3IEU A;  2JMP A;  1L2F A;  4D4I A;  2P2J A;  3R9X A;  3E7X A;  1ZB9 A;  2D28 C;  4JI0 C;  3CQ2 A;  2ZZM A;  4G36 A;  3CQ1 A;  5KYT A;  4LFB C;  3VNQ A;  2QVY X;  5BSR A;  3I08 A;  2M5H A;  5BUR A;  4JM1 A;  4LF4 C;  2OO4 A;  3B7W A;  5A19 A;  2ZM6 C;  1T5D X;  1IBK C;  2KDN A;  3KXW A;  4OXI A;  4X65 C;  2YCB A;  3C5E A;  4D56 A;  1FLO A;  4LF9 C;  2E8C A;  4DR6 C;  4X66 C;  1UWD A;  4K0K C;  2F4V C;  4RM2 A;  3PES A;  3CQ3 A;  3PBK A;  3GR1 A;  5BSM A;  4PUH A;  4NXM C;  4D4G A;  3IML A;  2ASB A;  3AF5 A;  1IBM C;  2V7B A;  3TUF A;  4DR1 C;  4AQY C;  1RG9 A;  1MXA A;  4LE5 A;  5K8F A;  4JI5 C;  3O2E A;  1HR0 C;  5FLX D;  4R1M A;  1WF3 A;  1PG4 A;  3A9U A;  3FCE A;  3J81 D;  5A2Q D;  1XRB A;  5T8S A;  4JI8 C;  1FJG C;  4L7I A;  2MM9 A;  3J80 D;  4DR5 C;  1J5E C;  3T1H C;  4RM3 A;  1VEH A;  3ETO A;  5AE3 A;  4NDN A;  4MH4 A;  4JI4 C;  2D7V A;  1LQL A; 
#chains in the Genus database with same CATH homology
 1NY8 A;  5LCI A;  1XS3 A;  2DHM A;  4PUI A;  2MM9 A;  3O2E A;  1V60 A;  4PUG A;  3TR3 A;  2KZ0 A;  2MMA B;  2NCL A;  4PUH A;  2KDN A;  2MCQ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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