4PUIA

Bola domain of sufe1 from arabidopsis thaliana
Total Genus 30
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
30
sequence length
95
structure length
85
Chain Sequence
ALGSRGMRIREKLEKELDPVELEVEDVSYQHADDGETHFNLRIVSDAFQGKSLVKRHRLIYDLLQDELKSGLHALSIVAKTPAEV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Structural and Spectroscopic Insights into BolA-Glutaredoxin Complexes.
pubmed doi rcsb
molecule tags Protein binding
source organism Arabidopsis thaliana
molecule keywords SufE-like protein, chloroplastic
total genus 30
structure length 85
sequence length 95
chains with identical sequence B
ec nomenclature
pdb deposition date 2014-03-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01722 BolA BolA-like protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.300.90 Alpha Beta 2-Layer Sandwich GMP Synthetase; Chain A, domain 3 BolA-like 4puiA01
4PUHA 5LCIA 2KDNA 2MMAB 2MM9A 4PUIA 1NY8A 3O2EA 4PUGA 1V60A 3TR3A 2NCLA 2DHMA 1XS3A 2KZ0A 2MCQA
chains in the Genus database with same CATH superfamily
1MD9A 4DV0C 3O2EA 1LCIA 3ETOA 2QW0X 2UU9C 2YCBA 1KKGA 2CXCA 4DR6C 5CZXA 3ETCA 1UKKA 4YY3C 4X64C 4K0BA 5A2QD 1USPA 4RM3A 1BA3A 4LF6C 5A19A 4PUHA 1XMQC 3A25A 3E7WA 2OPLB 3LNVA 1RY2A 5BSRA 3UX3A 4ODJA 5T8TA 2EGTA 5CZVA 2UUCC 3L95X 4X62C 4D57A 4RVNA 5H9UA 4DG8A 1UWDA 3AF5A 2VSQA 2Z51A 4BBYA 1I94C 3TQIA 2M5HA 2AYAA 1P4EC 4BSZA 4DV4C 4G36A 2HJGA 2KDNA 3KXWA 2YWBA 4DUZC 1FLOA 2D7VA 4HPVA 2MMAB 2PN2A 3UEBA 5BUQA 4DR5C 5E7QA 2JMPA 4JI5C 1ULTA 2JNVA 4TPSB 1RG9A 5AE3A 4RM2A 2UXCC 4JI3C 2VZEA 2YWCA 4JI1C 5FLXD 4D56A 2D1RA 2UXDC 2D1SA 3GR1A 2YX1A 2ZZMA 2BJOA 3IMLA 1N36C 2E7GA 3TDEA 2KZ0A 1PG3A 1P4EA 3NI2A 4RLQA 1LQLA 2D1TA 5A1GA 4MH4A 2QL8A 3IEUA 4GXQA 3CQ3A 4RLFA 4ZJZA 3T1HC 3G7SA 4D4IA 1O93A 2P2FA 1TH5A 4DCTA 5BSTA 2D1QA 3RV2A 2VQEC 2P20A 1PG4A 1QM4A 4U5YD 1O92A 2Y4OA 1IBMC 3UOWA 4JI2C 1N32C 4LF7C 5A1IA 4JV5C 2XR1A 5BSMA 4DR2C 4OX9C 3EERA 3VNRA 1L2FA 4IR7A 3OTOC 4R0MA 4FUQA 5AE2A 4RMNA 3L8CA 4PROC 4EATA 4X65C 1MXCA 1IBKC 4I9FA 3NYQA 1XS3A 3PBKA 3VNQA 3NPDA 3GPCA 2MCQA 2QVXX 2E0GA 3LAXA 5LCIA 1MXBA 2VQFC 3SO4A 3NYRA 1NYEA 1HH2P 1J5EC 1HNWC 1M6XC 1FJGC 1WF3A 4FTFA 4DG9A 4DV1C 3C5EA 4FUTA 4L7IA 2P2QA 2E8EA 4DR7C 2UXBC 4NXMC 4R1MA 4PUIA 4GKKC 4LFBC 3CJEA 1MKYA 1QWIA 3R9WA 4ISBA 4G1IA 4DV7C 3R9XA 5BURA 2KZFA 1HNXC 4DCSA 1FUGA 3J81D 2QVZX 2OO4A 1JOSA 3AF6A 4XX2A 2MM9A 4I9GA 3TR3A 4YHHC 2ONFA 5KYTA 2D28C 1XRBA 2NCLA 3J80D 1P7LA 3LUSA 3PROC 1M6XA 1VEHA 2UUAC 2P2JA 3DLPX 5BSWA 1V25A 3GR0A 5K85A 3A9VA 4LE5A 4G37A 3LGXA 1K0RA 3A26A 4JI0C 5K8FA 1AMUA 5BUSA 4PZPA 2HHHC 3IEVA 2M5OA 3R44A 3IPLA 1IB8A 1XHJA 3S82A 2OBVA 3RG2A 4LF9C 4IZ6A 1XRCA 4L4QA 1N33C 4K0KC 5LMNC 4LFAC 3GKUA 4DV2C 2ZM6C 1MDFA 1V60A 4WS9A 5IWAC 2Y4NA 4KTTA 1N34C 3A4IA 4DV3C 2WP0C 3I07A 4L2ZA 3JAMD 4R1LA 2CY1A 1MXAA 5AE1A 1WH9A 1USPB 2UUBC 5DV9A 4BCAA 2E5LC 2ASBA 2V7BA 4NOZA 3UZ0A 1O90A 2ZZNA 4B3MC 1YJ7A 1XMOC 3E7XA 4PHTA 5BSVA 4DV6C 4BC9A 4LF5C 1O9TA 4B3TC 4B3SC 4DR4C 2OPLA 3A9UA 3PESA 3FCCA 1IBLC 3N2QA 4DR1C 3K6RA 4JI8C 1ZB8A 1HR0C 2WD9A 1ZB9A 4AQYC 1XNQC 3DAYA 5KYVA 4MTNA 4JI7C 5T8SA 1N2FA 4LF8C 4LFCC 4GS5A 4RVOA 4JM1A 4B3RC 4KHPC 2P02A 1HNZC 1XRAA 3FCEA 1PU1A 2BH1X 4DCVA 5IFIA 2ATWA 4JI4C 1T5DX 3AY0A 4LF4C 2DHMA 1EGAA 4WV3A 3LNOA 1WCJA 3B7WA 1ML8A 4JI6C 3CQ1A 1PA4A 2CU6A 1GPMA 4X66C 4DV5C 5KEIA 5ADZA 4DUYC 3N54B 4OXIA 3H2TA 4PUGA 5BR8C 1MDBA 2F4VC 4GXRA 4NDNA 2DYJA 1XNRC 2E8FA 2P2BA 2Y27A 2E8CA 3CW9A 4KTVA 4NXNC 1NY8A 5BSUA 5IT9D 4ZLPA 2DPLA 3EQ6A 1T5HX 4DCUA 5LMUC 5GTDA 5JRHA 3TUFA 3DHVA 4OYCA 3I08A 3VNSA 4JYAC 4DR3C 4BC7A 1V26A 2QVYX 4D4GA 2D27A 2P2MA 2PT7G 1VLAA 3UX2A 3T1YC 3CQ2A 4GKJC 2PROA 3CW8X
chains in the Genus database with same CATH topology
4PUHA 5LCIA 2KDNA 2MMAB 2MM9A 4PUIA 1NY8A 3O2EA 4PUGA 1V60A 3TR3A 2NCLA 2DHMA 1XS3A 2KZ0A 2MCQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4PUH A;  5LCI A;  2KDN A;  2MMA B;  2MM9 A;  4PUI A;  1NY8 A;  3O2E A;  4PUG A;  1V60 A;  3TR3 A;  2NCL A;  2DHM A;  1XS3 A;  2KZ0 A;  2MCQ A; 
#chains in the Genus database with same CATH topology
 1MD9 A;  4DV0 C;  3O2E A;  1LCI A;  3ETO A;  2QW0 X;  2UU9 C;  2YCB A;  1KKG A;  2CXC A;  4DR6 C;  5CZX A;  3ETC A;  1UKK A;  4YY3 C;  4X64 C;  4K0B A;  5A2Q D;  1USP A;  4RM3 A;  1BA3 A;  4LF6 C;  5A19 A;  4PUH A;  1XMQ C;  3A25 A;  3E7W A;  2OPL B;  3LNV A;  1RY2 A;  5BSR A;  3UX3 A;  4ODJ A;  5T8T A;  2EGT A;  5CZV A;  2UUC C;  3L95 X;  4X62 C;  4D57 A;  4RVN A;  5H9U A;  4DG8 A;  1UWD A;  3AF5 A;  2VSQ A;  2Z51 A;  4BBY A;  1I94 C;  3TQI A;  2M5H A;  2AYA A;  1P4E C;  4BSZ A;  4DV4 C;  4G36 A;  2HJG A;  2KDN A;  3KXW A;  2YWB A;  4DUZ C;  1FLO A;  2D7V A;  4HPV A;  2MMA B;  2PN2 A;  3UEB A;  5BUQ A;  4DR5 C;  5E7Q A;  2JMP A;  4JI5 C;  1ULT A;  2JNV A;  4TPS B;  1RG9 A;  5AE3 A;  4RM2 A;  2UXC C;  4JI3 C;  2VZE A;  2YWC A;  4JI1 C;  5FLX D;  4D56 A;  2D1R A;  2UXD C;  2D1S A;  3GR1 A;  2YX1 A;  2ZZM A;  2BJO A;  3IML A;  1N36 C;  2E7G A;  3TDE A;  2KZ0 A;  1PG3 A;  1P4E A;  3NI2 A;  4RLQ A;  1LQL A;  2D1T A;  5A1G A;  4MH4 A;  2QL8 A;  3IEU A;  4GXQ A;  3CQ3 A;  4RLF A;  4ZJZ A;  3T1H C;  3G7S A;  4D4I A;  1O93 A;  2P2F A;  1TH5 A;  4DCT A;  5BST A;  2D1Q A;  3RV2 A;  2VQE C;  2P20 A;  1PG4 A;  1QM4 A;  4U5Y D;  1O92 A;  2Y4O A;  1IBM C;  3UOW A;  4JI2 C;  1N32 C;  4LF7 C;  5A1I A;  4JV5 C;  2XR1 A;  5BSM A;  4DR2 C;  4OX9 C;  3EER A;  3VNR A;  1L2F A;  4IR7 A;  3OTO C;  4R0M A;  4FUQ A;  5AE2 A;  4RMN A;  3L8C A;  4PRO C;  4EAT A;  4X65 C;  1MXC A;  1IBK C;  4I9F A;  3NYQ A;  1XS3 A;  3PBK A;  3VNQ A;  3NPD A;  3GPC A;  2MCQ A;  2QVX X;  2E0G A;  3LAX A;  5LCI A;  1MXB A;  2VQF C;  3SO4 A;  3NYR A;  1NYE A;  1HH2 P;  1J5E C;  1HNW C;  1M6X C;  1FJG C;  1WF3 A;  4FTF A;  4DG9 A;  4DV1 C;  3C5E A;  4FUT A;  4L7I A;  2P2Q A;  2E8E A;  4DR7 C;  2UXB C;  4NXM C;  4R1M A;  4PUI A;  4GKK C;  4LFB C;  3CJE A;  1MKY A;  1QWI A;  3R9W A;  4ISB A;  4G1I A;  4DV7 C;  3R9X A;  5BUR A;  2KZF A;  1HNX C;  4DCS A;  1FUG A;  3J81 D;  2QVZ X;  2OO4 A;  1JOS A;  3AF6 A;  4XX2 A;  2MM9 A;  4I9G A;  3TR3 A;  4YHH C;  2ONF A;  5KYT A;  2D28 C;  1XRB A;  2NCL A;  3J80 D;  1P7L A;  3LUS A;  3PRO C;  1M6X A;  1VEH A;  2UUA C;  2P2J A;  3DLP X;  5BSW A;  1V25 A;  3GR0 A;  5K85 A;  3A9V A;  4LE5 A;  4G37 A;  3LGX A;  1K0R A;  3A26 A;  4JI0 C;  5K8F A;  1AMU A;  5BUS A;  4PZP A;  2HHH C;  3IEV A;  2M5O A;  3R44 A;  3IPL A;  1IB8 A;  1XHJ A;  3S82 A;  2OBV A;  3RG2 A;  4LF9 C;  4IZ6 A;  1XRC A;  4L4Q A;  1N33 C;  4K0K C;  5LMN C;  4LFA C;  3GKU A;  4DV2 C;  2ZM6 C;  1MDF A;  1V60 A;  4WS9 A;  5IWA C;  2Y4N A;  4KTT A;  1N34 C;  3A4I A;  4DV3 C;  2WP0 C;  3I07 A;  4L2Z A;  3JAM D;  4R1L A;  2CY1 A;  1MXA A;  5AE1 A;  1WH9 A;  1USP B;  2UUB C;  5DV9 A;  4BCA A;  2E5L C;  2ASB A;  2V7B A;  4NOZ A;  3UZ0 A;  1O90 A;  2ZZN A;  4B3M C;  1YJ7 A;  1XMO C;  3E7X A;  4PHT A;  5BSV A;  4DV6 C;  4BC9 A;  4LF5 C;  1O9T A;  4B3T C;  4B3S C;  4DR4 C;  2OPL A;  3A9U A;  3PES A;  3FCC A;  1IBL C;  3N2Q A;  4DR1 C;  3K6R A;  4JI8 C;  1ZB8 A;  1HR0 C;  2WD9 A;  1ZB9 A;  4AQY C;  1XNQ C;  3DAY A;  5KYV A;  4MTN A;  4JI7 C;  5T8S A;  1N2F A;  4LF8 C;  4LFC C;  4GS5 A;  4RVO A;  4JM1 A;  4B3R C;  4KHP C;  2P02 A;  1HNZ C;  1XRA A;  3FCE A;  1PU1 A;  2BH1 X;  4DCV A;  5IFI A;  2ATW A;  4JI4 C;  1T5D X;  3AY0 A;  4LF4 C;  2DHM A;  1EGA A;  4WV3 A;  3LNO A;  1WCJ A;  3B7W A;  1ML8 A;  4JI6 C;  3CQ1 A;  1PA4 A;  2CU6 A;  1GPM A;  4X66 C;  4DV5 C;  5KEI A;  5ADZ A;  4DUY C;  3N54 B;  4OXI A;  3H2T A;  4PUG A;  5BR8 C;  1MDB A;  2F4V C;  4GXR A;  4NDN A;  2DYJ A;  1XNR C;  2E8F A;  2P2B A;  2Y27 A;  2E8C A;  3CW9 A;  4KTV A;  4NXN C;  1NY8 A;  5BSU A;  5IT9 D;  4ZLP A;  2DPL A;  3EQ6 A;  1T5H X;  4DCU A;  5LMU C;  5GTD A;  5JRH A;  3TUF A;  3DHV A;  4OYC A;  3I08 A;  3VNS A;  4JYA C;  4DR3 C;  4BC7 A;  1V26 A;  2QVY X;  4D4G A;  2D27 A;  2P2M A;  2PT7 G;  1VLA A;  3UX2 A;  3T1Y C;  3CQ2 A;  4GKJ C;  2PRO A;  3CW8 X; 
#chains in the Genus database with same CATH homology
 4PUH A;  5LCI A;  2KDN A;  2MMA B;  2MM9 A;  4PUI A;  1NY8 A;  3O2E A;  4PUG A;  1V60 A;  3TR3 A;  2NCL A;  2DHM A;  1XS3 A;  2KZ0 A;  2MCQ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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