1E54A

Anion-selective porin from comamonas acidovorans
Total Genus 95
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
95
sequence length
332
structure length
332
Chain Sequence
ESSVTLFGIVDTNVAYVNKDAAGDSRYGLGTSGASTSRLGLRGTEDLGGGLKAGFWLEGEIFGDDGNASGFNFKRRSTVSLSGNFGEVRLGRDLVPTSQKLTSYDLFSATGIGPFMGFRNWAAGQGADDNGIRANNLISYYTPNFGGFNAGFGYAFDEKQTIGTADSVGRYIGGYVAYDNGPLSASLGLAQQKTAVGGLATDRDEITLGASYNFGVAKLSGLLQQTKFKRDIGGDIKTNSYMLGASAPVGGVGEVKLQYALYDQKAIDSKAHQITLGYVHNLSKRTALYGNLAFLKNKDASTLGLQAKGVYAGGVQAGESQTGVQVGIRHAF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Outer membrane protein
molecule keywords OUTER MEMBRANE PORIN PROTEIN 32
publication title Crystal Structure of Omp32, the Anion-Selective Porin from Comamonas Acidovorans, in Complex with a Periplasmic Peptideat 2.1 A Resolution
pubmed doi rcsb
total genus 95
structure length 332
sequence length 332
ec nomenclature
pdb deposition date 2000-07-17
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.160.10 Mainly Beta Beta Barrel Porin Porin 1e54A00
1HXTA 3JTYA 1PRNA 1PHOA 4FRTA 4LSEA 4FSPA 3VY8X 5FVNA 2Y2XA 4D5UA 3K19A 3SYBA 4RJXA 2XE1A 4AUIA 3SZDA 4FSOA 4JFBA 2FGQX 4GCPA 2OMFA 3POXA 4FRXA 3T20A 2ODJA 1GFQA 2Y0KA 5DL7A 3WI4A 3SZVA 2XE2A 4RJWA 4GCQA 2XE5A 2FGRA 2J1NA 3POUA 3EMNX 3VY9X 4KR8A 3UU2A 2XG6A 2ZFGA 3PRNA 2K4TA 5DL6A 6PRNA 2PRNA 1GFNA 3VZUX 2ZLDA 2PORA 1HXXA 1GFMA 2QTKA 3HW9A 3POQA 3WI5A 3VZWX 3VZTX 2O4VA 4LSIA 3T24A 5DL5A 1BT9A 1E54A 4KRAA 5DL8A 1OPFA 4LSFA 4BUMX 1HXUA 1OSMA 2Y0HA 2J4UP 3PORA 3SYSA 1GFPA 3HWBA 3O0EA 4C69X 4D65A 4FOZA 4FMSA 3SY9A 4GCSA 7PRNA 2Y0LA 4KR4A 3T0SA 8PRNA 3A2SX 1H6S1 5PRNA 3SY7A 3UPGA 5JDPA 3NSGA 4LSHA 4D64A 1MPFA 3FYXA 2XE3A 1GFOA 4FT6A 1BH3A
chains in the Genus database with same CATH superfamily
1HXTA 3PGRA 2W80C 3AA0B 3NJTA 3JTYA 1PRNA 3LK41 1PHOA 2R4PA 2YNKA 4FRTA 4LSEA 4FSPA 3QRAA 5KAFO 2F1TA 3VY8X 5FVNA 1ZHWA 3HOLA 1IZNA 2Y2XA 2KDYA 3K19A 4D5UA 3SYBA 2F1CX 4PJ0O 2XE1A 3LK3A 4RJXA 4C4VA 3A0HO 3AA6B 4AUIA 3SZDA 2R4NA 4FQEA 4FSOA 4XNLA 4JFBA 2FGQX 4GCPA 3AAAA 2OMFA 3POXA 4G75A 4U9CA 3PQUA 5G26A 3PQSA 2WJRA 3AA1B 4FRXA 4AYEC 4JCHA 2X9KA 4CTDA 3T20A 1P4TA 1ZHYA 2ODJA 3C5OA 1GFQA 3LK2B 4K3BA 3VE1A 1MM5A 5ADXL 4E1SA 4UB8O 5AFUL 4G76A 5B66O 2Y0KA 3RBHA 5DL7A 3WI4A 2XTRA 3AA7B 3SZVA 4AYNA 1MM4A 3DWNA 2W81C 2R88A 2XE2A 3AAEB 1THQA 1ZHZA 4RJWA 4GCQA 2KXPA 2XE5A 5ADXK 2R89A 4AYDC 2JQYA 4AKMA 2FGRA 2J1NA 3DZMA 4AYMC 3POUA 2IWVA 3EMNX 5G39A 3VY9X 4KR8A 2YPVA 4FZNA 3UU2A 3V8UA 4O3ZA 5E79O 3PF1A 4AFKA 3AA0A 2LFUA 4B61A 3PGUA 5GV0A 2KZ7B 5G3AA 5G38A 1Q9GA 2XG6A 3KVDD 3LK3B 2ZFGA 3DWOX 4AKRB 3PRNA 2K4TA 2XMXA 5DL6A 6PRNA 2PRNA 4N58A 2XTQA 1GFNA 4N59A 3VZUX 5T5FA 3AA6A 3VE2A 4E1TA 1QJPA 1ZHXA 2ZLDA 2PORA 2IWWA 4O49A 3AA1A 1HXXA 4O3WA 5GTHO 2MNHA 5AFUK 1GFMA 2QTKA 3HW9A 4GHBA 4XNKA 3JCUO 3BRYA 1Q9FA 3POQA 4RLCA 1QJ9A 3BS0A 3GP6A 3VZWX 3VZTX 3WI5A 2KC0A 5IYUA 1G90A 3AA7A 1T1LA 2O4VA 3QRCA 4LSIA 3T24A 3KZIO 5DL5A 4F4BA 1BT9A 3AAEA 1E54A 4KRAA 5DL8A 1ORMA 3A0BO 1T16A 2M07A 1OPFA 1IZNB 4FESA 4LSFA 4O3XB 2R4OA 4BUMX 1HXUA 1OSMA 4C4VB 4PUXA 4K3CA 3HOEA 2Y0HA 3TZGA 2J4UP 4QQ1A 3PORA 4O4XA 2N2LA 4FZMA 4RLBA 3SYSA 4Z3TA 3AAAB 4PR7A 1GFPA 3HWBA 3O0EA 2WJQA 5EE2A 5GTIO 3DA3A 4C69X 4D65A 4FOZA 5TISO 5D5DA 3PGSA 2X27X 4IL6O 2AXTO 5KAIO 2KZ7A 4AYID 4FMSA 3SY9A 4C00A 4GCSA 7PRNA 2Y0LA 3LK2A 4KR4A 4O4UA 2LHFA 2GE4A 4FUVA 2ERVA 1BXWA 3T0SA 3UAQA 4AKRA 4AZLA 4UB6O 4GF4A 8PRNA 2JMMA 5H2FO 3A2SX 1H6S1 2R8AA 1ZHTA 2MHLA 5PRNA 3SY7A 5B5EO 4N75A 5JDPA 3UPGA 3NSGA 4RL9A 2K0LA 2KXPB 3BRZA 4LSHA 3G7GA 4D64A 2M06A 2WVPA 1S5LO 2R4LA 3DA4A 4FZLA 3WU2O 4N74A 1MPFA 2F1VA 3FYXA 1QJ8A 3LK42 2XE3A 1YS5A 1GFOA 2N2MA 4FT6A 4O3YA 2Y7SA 1BH3A
chains in the Genus database with same CATH topology
1HXTA 2W80C 3AA0B 3JTYA 1PRNA 3LK41 1PHOA 2YNKA 4FRTA 4LSEA 4FSPA 3QRAA 2F1TA 3VY8X 5FVNA 1ZHWA 3HOLA 1IZNA 2Y2XA 2KDYA 3K19A 4D5UA 3SYBA 4RJXA 2XE1A 3LK3A 3AA6B 4AUIA 3SZDA 4FSOA 4XNLA 4JFBA 2FGQX 4GCPA 3AAAA 2OMFA 3POXA 4G75A 4U9CA 3PQUA 5G26A 3PQSA 4FRXA 3AA1B 4AYEC 4JCHA 3T20A 1P4TA 1ZHYA 2ODJA 3C5OA 1GFQA 3LK2B 3VE1A 1MM5A 5ADXL 4E1SA 5AFUL 4G76A 2Y0KA 3RBHA 5DL7A 3WI4A 2XTRA 3AA7B 3SZVA 4AYNA 1MM4A 2W81C 2XE2A 3AAEB 1THQA 1ZHZA 4RJWA 4GCQA 2KXPA 2XE5A 5ADXK 4AYDC 4AKMA 2FGRA 2J1NA 4AYMC 3POUA 3EMNX 3VY9X 4KR8A 2YPVA 4FZNA 3UU2A 3V8UA 4O3ZA 4AFKA 3AA0A 2LFUA 4B61A 5GV0A 2KZ7B 1Q9GA 2XG6A 3KVDD 3LK3B 2ZFGA 4AKRB 3PRNA 2K4TA 2XMXA 5DL6A 6PRNA 2PRNA 4N58A 2XTQA 1GFNA 4N59A 3VZUX 5T5FA 3AA6A 3VE2A 4E1TA 1QJPA 1ZHXA 2ZLDA 2PORA 4O49A 3AA1A 1HXXA 4O3WA 2MNHA 5AFUK 1GFMA 2QTKA 3HW9A 4GHBA 4XNKA 3POQA 1Q9FA 4RLCA 3WI5A 1QJ9A 3GP6A 3VZWX 3VZTX 5IYUA 2KC0A 1G90A 3AA7A 2O4VA 3QRCA 4LSIA 3T24A 5DL5A 4F4BA 1BT9A 3AAEA 1E54A 4KRAA 5DL8A 1ORMA 4O3XB 2M07A 1OPFA 1IZNB 4FESA 4LSFA 4BUMX 1HXUA 1OSMA 4PUXA 3TZGA 3HOEA 2Y0HA 2J4UP 4QQ1A 3PORA 4O4XA 2N2LA 4FZMA 4RLBA 3SYSA 4Z3TA 3AAAB 1GFPA 3HWBA 3O0EA 5EE2A 4C69X 4D65A 3DA3A 4FOZA 5D5DA 2X27X 2KZ7A 4AYID 4FMSA 3SY9A 4GCSA 7PRNA 2Y0LA 3LK2A 4KR4A 4O4UA 2LHFA 2GE4A 4FUVA 2ERVA 1BXWA 3T0SA 3UAQA 4AKRA 4AZLA 4GF4A 8PRNA 2JMMA 3A2SX 1H6S1 5PRNA 1ZHTA 2MHLA 3SY7A 3UPGA 5JDPA 3NSGA 4RL9A 2K0LA 2KXPB 4LSHA 3G7GA 4D64A 2M06A 3DA4A 4FZLA 1MPFA 2F1VA 3FYXA 1QJ8A 3LK42 2XE3A 1YS5A 1GFOA 2N2MA 4FT6A 4O3YA 2Y7SA 1BH3A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1HXT A;  3JTY A;  1PRN A;  1PHO A;  4FRT A;  4LSE A;  4FSP A;  3VY8 X;  5FVN A;  2Y2X A;  4D5U A;  3K19 A;  3SYB A;  4RJX A;  2XE1 A;  4AUI A;  3SZD A;  4FSO A;  4JFB A;  2FGQ X;  4GCP A;  2OMF A;  3POX A;  4FRX A;  3T20 A;  2ODJ A;  1GFQ A;  2Y0K A;  5DL7 A;  3WI4 A;  3SZV A;  2XE2 A;  4RJW A;  4GCQ A;  2XE5 A;  2FGR A;  2J1N A;  3POU A;  3EMN X;  3VY9 X;  4KR8 A;  3UU2 A;  2XG6 A;  2ZFG A;  3PRN A;  2K4T A;  5DL6 A;  6PRN A;  2PRN A;  1GFN A;  3VZU X;  2ZLD A;  2POR A;  1HXX A;  1GFM A;  2QTK A;  3HW9 A;  3POQ A;  3WI5 A;  3VZW X;  3VZT X;  2O4V A;  4LSI A;  3T24 A;  5DL5 A;  1BT9 A;  1E54 A;  4KRA A;  5DL8 A;  1OPF A;  4LSF A;  4BUM X;  1HXU A;  1OSM A;  2Y0H A;  2J4U P;  3POR A;  3SYS A;  1GFP A;  3HWB A;  3O0E A;  4C69 X;  4D65 A;  4FOZ A;  4FMS A;  3SY9 A;  4GCS A;  7PRN A;  2Y0L A;  4KR4 A;  3T0S A;  8PRN A;  3A2S X;  1H6S 1;  5PRN A;  3SY7 A;  3UPG A;  5JDP A;  3NSG A;  4LSH A;  4D64 A;  1MPF A;  3FYX A;  2XE3 A;  1GFO A;  4FT6 A;  1BH3 A; 
#chains in the Genus database with same CATH topology
 1HXT A;  3PGR A;  2W80 C;  3AA0 B;  3NJT A;  3JTY A;  1PRN A;  3LK4 1;  1PHO A;  2R4P A;  2YNK A;  4FRT A;  4LSE A;  4FSP A;  3QRA A;  5KAF O;  2F1T A;  3VY8 X;  5FVN A;  1ZHW A;  3HOL A;  1IZN A;  2Y2X A;  2KDY A;  3K19 A;  4D5U A;  3SYB A;  2F1C X;  4PJ0 O;  2XE1 A;  3LK3 A;  4RJX A;  4C4V A;  3A0H O;  3AA6 B;  4AUI A;  3SZD A;  2R4N A;  4FQE A;  4FSO A;  4XNL A;  4JFB A;  2FGQ X;  4GCP A;  3AAA A;  2OMF A;  3POX A;  4G75 A;  4U9C A;  3PQU A;  5G26 A;  3PQS A;  2WJR A;  3AA1 B;  4FRX A;  4AYE C;  4JCH A;  2X9K A;  4CTD A;  3T20 A;  1P4T A;  1ZHY A;  2ODJ A;  3C5O A;  1GFQ A;  3LK2 B;  4K3B A;  3VE1 A;  1MM5 A;  5ADX L;  4E1S A;  4UB8 O;  5AFU L;  4G76 A;  5B66 O;  2Y0K A;  3RBH A;  5DL7 A;  3WI4 A;  2XTR A;  3AA7 B;  3SZV A;  4AYN A;  1MM4 A;  3DWN A;  2W81 C;  2R88 A;  2XE2 A;  3AAE B;  1THQ A;  1ZHZ A;  4RJW A;  4GCQ A;  2KXP A;  2XE5 A;  5ADX K;  2R89 A;  4AYD C;  2JQY A;  4AKM A;  2FGR A;  2J1N A;  3DZM A;  4AYM C;  3POU A;  2IWV A;  3EMN X;  5G39 A;  3VY9 X;  4KR8 A;  2YPV A;  4FZN A;  3UU2 A;  3V8U A;  4O3Z A;  5E79 O;  3PF1 A;  4AFK A;  3AA0 A;  2LFU A;  4B61 A;  3PGU A;  5GV0 A;  2KZ7 B;  5G3A A;  5G38 A;  1Q9G A;  2XG6 A;  3KVD D;  3LK3 B;  2ZFG A;  3DWO X;  4AKR B;  3PRN A;  2K4T A;  2XMX A;  5DL6 A;  6PRN A;  2PRN A;  4N58 A;  2XTQ A;  1GFN A;  4N59 A;  3VZU X;  5T5F A;  3AA6 A;  3VE2 A;  4E1T A;  1QJP A;  1ZHX A;  2ZLD A;  2POR A;  2IWW A;  4O49 A;  3AA1 A;  1HXX A;  4O3W A;  5GTH O;  2MNH A;  5AFU K;  1GFM A;  2QTK A;  3HW9 A;  4GHB A;  4XNK A;  3JCU O;  3BRY A;  1Q9F A;  3POQ A;  4RLC A;  1QJ9 A;  3BS0 A;  3GP6 A;  3VZW X;  3VZT X;  3WI5 A;  2KC0 A;  5IYU A;  1G90 A;  3AA7 A;  1T1L A;  2O4V A;  3QRC A;  4LSI A;  3T24 A;  3KZI O;  5DL5 A;  4F4B A;  1BT9 A;  3AAE A;  1E54 A;  4KRA A;  5DL8 A;  1ORM A;  3A0B O;  1T16 A;  2M07 A;  1OPF A;  1IZN B;  4FES A;  4LSF A;  4O3X B;  2R4O A;  4BUM X;  1HXU A;  1OSM A;  4C4V B;  4PUX A;  4K3C A;  3HOE A;  2Y0H A;  3TZG A;  2J4U P;  4QQ1 A;  3POR A;  4O4X A;  2N2L A;  4FZM A;  4RLB A;  3SYS A;  4Z3T A;  3AAA B;  4PR7 A;  1GFP A;  3HWB A;  3O0E A;  2WJQ A;  5EE2 A;  5GTI O;  3DA3 A;  4C69 X;  4D65 A;  4FOZ A;  5TIS O;  5D5D A;  3PGS A;  2X27 X;  4IL6 O;  2AXT O;  5KAI O;  2KZ7 A;  4AYI D;  4FMS A;  3SY9 A;  4C00 A;  4GCS A;  7PRN A;  2Y0L A;  3LK2 A;  4KR4 A;  4O4U A;  2LHF A;  2GE4 A;  4FUV A;  2ERV A;  1BXW A;  3T0S A;  3UAQ A;  4AKR A;  4AZL A;  4UB6 O;  4GF4 A;  8PRN A;  2JMM A;  5H2F O;  3A2S X;  1H6S 1;  2R8A A;  1ZHT A;  2MHL A;  5PRN A;  3SY7 A;  5B5E O;  4N75 A;  5JDP A;  3UPG A;  3NSG A;  4RL9 A;  2K0L A;  2KXP B;  3BRZ A;  4LSH A;  3G7G A;  4D64 A;  2M06 A;  2WVP A;  1S5L O;  2R4L A;  3DA4 A;  4FZL A;  3WU2 O;  4N74 A;  1MPF A;  2F1V A;  3FYX A;  1QJ8 A;  3LK4 2;  2XE3 A;  1YS5 A;  1GFO A;  2N2M A;  4FT6 A;  4O3Y A;  2Y7S A;  1BH3 A; 
#chains in the Genus database with same CATH homology
 1HXT A;  2W80 C;  3AA0 B;  3JTY A;  1PRN A;  3LK4 1;  1PHO A;  2YNK A;  4FRT A;  4LSE A;  4FSP A;  3QRA A;  2F1T A;  3VY8 X;  5FVN A;  1ZHW A;  3HOL A;  1IZN A;  2Y2X A;  2KDY A;  3K19 A;  4D5U A;  3SYB A;  4RJX A;  2XE1 A;  3LK3 A;  3AA6 B;  4AUI A;  3SZD A;  4FSO A;  4XNL A;  4JFB A;  2FGQ X;  4GCP A;  3AAA A;  2OMF A;  3POX A;  4G75 A;  4U9C A;  3PQU A;  5G26 A;  3PQS A;  4FRX A;  3AA1 B;  4AYE C;  4JCH A;  3T20 A;  1P4T A;  1ZHY A;  2ODJ A;  3C5O A;  1GFQ A;  3LK2 B;  3VE1 A;  1MM5 A;  5ADX L;  4E1S A;  5AFU L;  4G76 A;  2Y0K A;  3RBH A;  5DL7 A;  3WI4 A;  2XTR A;  3AA7 B;  3SZV A;  4AYN A;  1MM4 A;  2W81 C;  2XE2 A;  3AAE B;  1THQ A;  1ZHZ A;  4RJW A;  4GCQ A;  2KXP A;  2XE5 A;  5ADX K;  4AYD C;  4AKM A;  2FGR A;  2J1N A;  4AYM C;  3POU A;  3EMN X;  3VY9 X;  4KR8 A;  2YPV A;  4FZN A;  3UU2 A;  3V8U A;  4O3Z A;  4AFK A;  3AA0 A;  2LFU A;  4B61 A;  5GV0 A;  2KZ7 B;  1Q9G A;  2XG6 A;  3KVD D;  3LK3 B;  2ZFG A;  4AKR B;  3PRN A;  2K4T A;  2XMX A;  5DL6 A;  6PRN A;  2PRN A;  4N58 A;  2XTQ A;  1GFN A;  4N59 A;  3VZU X;  5T5F A;  3AA6 A;  3VE2 A;  4E1T A;  1QJP A;  1ZHX A;  2ZLD A;  2POR A;  4O49 A;  3AA1 A;  1HXX A;  4O3W A;  2MNH A;  5AFU K;  1GFM A;  2QTK A;  3HW9 A;  4GHB A;  4XNK A;  3POQ A;  1Q9F A;  4RLC A;  3WI5 A;  1QJ9 A;  3GP6 A;  3VZW X;  3VZT X;  5IYU A;  2KC0 A;  1G90 A;  3AA7 A;  2O4V A;  3QRC A;  4LSI A;  3T24 A;  5DL5 A;  4F4B A;  1BT9 A;  3AAE A;  1E54 A;  4KRA A;  5DL8 A;  1ORM A;  4O3X B;  2M07 A;  1OPF A;  1IZN B;  4FES A;  4LSF A;  4BUM X;  1HXU A;  1OSM A;  4PUX A;  3TZG A;  3HOE A;  2Y0H A;  2J4U P;  4QQ1 A;  3POR A;  4O4X A;  2N2L A;  4FZM A;  4RLB A;  3SYS A;  4Z3T A;  3AAA B;  1GFP A;  3HWB A;  3O0E A;  5EE2 A;  4C69 X;  4D65 A;  3DA3 A;  4FOZ A;  5D5D A;  2X27 X;  2KZ7 A;  4AYI D;  4FMS A;  3SY9 A;  4GCS A;  7PRN A;  2Y0L A;  3LK2 A;  4KR4 A;  4O4U A;  2LHF A;  2GE4 A;  4FUV A;  2ERV A;  1BXW A;  3T0S A;  3UAQ A;  4AKR A;  4AZL A;  4GF4 A;  8PRN A;  2JMM A;  3A2S X;  1H6S 1;  5PRN A;  1ZHT A;  2MHL A;  3SY7 A;  3UPG A;  5JDP A;  3NSG A;  4RL9 A;  2K0L A;  2KXP B;  4LSH A;  3G7G A;  4D64 A;  2M06 A;  3DA4 A;  4FZL A;  1MPF A;  2F1V A;  3FYX A;  1QJ8 A;  3LK4 2;  2XE3 A;  1YS5 A;  1GFO A;  2N2M A;  4FT6 A;  4O3Y A;  2Y7S A;  1BH3 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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