1E54A

Anion-selective porin from comamonas acidovorans
Total Genus 95
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
95
sequence length
332
structure length
332
Chain Sequence
b'ESSVTLFGIVDTNVAYVNKDAAGDSRYGLGTSGASTSRLGLRGTEDLGGGLKAGFWLEGEIFGDDGNASGFNFKRRSTVSLSGNFGEVRLGRDLVPTSQKLTSYDLFSATGIGPFMGFRNWAAGQGADDNGIRANNLISYYTPNFGGFNAGFGYAFDEKQTIGTADSVGRYIGGYVAYDNGPLSASLGLAQQKTAVGGLATDRDEITLGASYNFGVAKLSGLLQQTKFKRDIGGDIKTNSYMLGASAPVGGVGEVKLQYALYDQKAIDSKAHQITLGYVHNLSKRTALYGNLAFLKNKDASTLGLQAKGVYAGGVQAGESQTGVQVGIRHAF'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal Structure of Omp32, the Anion-Selective Porin from Comamonas Acidovorans, in Complex with a Periplasmic Peptideat 2.1 A Resolution
pubmed doi rcsb
molecule keywords OUTER MEMBRANE PORIN PROTEIN 32
molecule tags Outer membrane protein
total genus 95
structure length 332
sequence length 332
ec nomenclature
pdb deposition date 2000-07-17
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.160.10 Mainly Beta Beta Barrel Porin Porin 1e54A00
3A2SX 4GCQA 1HXTA 5DL8A 4FSPA 3VZTX 1BH3A 2Y0KA 2K4TA 1PRNA 5PRNA 3VZWX 4BUMX 2Y2XA 3POQA 1BT9A 4LSFA 5DL7A 1OSMA 3POXA 3K19A 4GCPA 1HXUA 4FT6A 2O4VA 3VZUX 2J4UP 2J1NA 2Y0HA 1MPFA 4KRAA 2OMFA 4FMSA 4D64A 4LSHA 3SYSA 1OPFA 3EMNX 3T20A 3WI4A 1GFMA 4KR4A 2XE2A 4JFBA 3JTYA 2PORA 2PRNA 2ZLDA 4D5UA 3T0SA 4FOZA 4AUIA 3FYXA 3VY9X 3SZDA 8PRNA 2ODJA 4RJWA 1HXXA 2XG6A 1E54A 3PRNA 2FGQX 4FSOA 3T24A 4FRXA 4RJXA 3PORA 3HWBA 1GFPA 2XE3A 4FRTA 3NSGA 3SZVA 3SY7A 2FGRA 4LSIA 2QTKA 2XE1A 3UPGA 4C69X 3O0EA 1GFOA 3SY9A 3POUA 4KR8A 1GFNA 4D65A 7PRNA 3UU2A 5JDPA 3WI5A 4GCSA 4LSEA 3HW9A 5FVNA 5DL6A 5DL5A 2ZFGA 3VY8X 1H6S1 6PRNA 1GFQA 2Y0LA 3SYBA 1PHOA 2XE5A
chains in the Genus database with same CATH superfamily
4AYDC 3A2SX 2Y7SA 5T5FA 2KDYA 2R4LA 4GCQA 4O3WA 4AYMC 1HXTA 3LK3A 3HOEA 3AA1A 5DL8A 5IYUA 4FUVA 1ZHYA 4FSPA 3VZTX 2F1VA 1S5LO 1BH3A 2R89A 3LK3B 2F1TA 3AA1B 4GF4A 3V8UA 2Y0KA 2K4TA 4XNLA 2N2MA 1PRNA 3PGUA 1ZHTA 2M07A 3PGSA 2IWVA 5PRNA 2JMMA 3VZWX 5GTHO 4FQEA 3DWNA 4N74A 4BUMX 5B5EO 2Y2XA 3POQA 1BT9A 4LSFA 2XTQA 2GE4A 3PF1A 2M06A 4UB8O 3RBHA 4FZLA 5DL7A 4C00A 4E1TA 2MHLA 1OSMA 3QRAA 4G75A 5E79O 2F1CX 2KZ7A 3A0BO 4FZMA 1QJ9A 2R8AA 3LK2A 4FESA 1T16A 3POXA 3WU2O 4F4BA 3K19A 2N2LA 4GCPA 4O4XA 1HXUA 2KZ7B 4FT6A 2O4VA 3BRZA 3VZUX 3LK2B 2J4UP 3QRCA 4CTDA 1ZHXA 3UAQA 2ERVA 2J1NA 2Y0HA 1MPFA 4KRAA 2OMFA 1QJPA 4FMSA 4D64A 3AAAA 4LSHA 3DA4A 1YS5A 2KXPA 2WJRA 3PQUA 1OPFA 1T1LA 2W81C 3EMNX 4O3YA 3SYSA 4PR7A 3WI4A 3T20A 4FZNA 2K0LA 1GFMA 4KR4A 5G26A 5G3AA 2XE2A 2KXPB 4JFBA 3JTYA 1Q9FA 2PORA 4C4VA 1THQA 4N59A 5AFUL 1QJ8A 2PRNA 2ZLDA 3PQSA 2R4PA 5KAFO 4U9CA 3T0SA 4D5UA 5AFUK 5G38A 4FOZA 4C4VB 2XMXA 3AA6A 2R88A 2AXTO 2WJQA 4AZLA 4RL9A 5B66O 3KVDD 4AUIA 3FYXA 4RLCA 3VY9X 1ZHWA 3SZDA 1ORMA 1MM4A 8PRNA 3GP6A 3BRYA 2ODJA 2YPVA 3AA6B 4RJWA 1HXXA 2W80C 1E54A 2XG6A 3PRNA 2FGQX 4PUXA 4FSOA 3VE1A 3T24A 4AKRA 4Z3TA 4FRXA 3DZMA 3TZGA 4RJXA 4N58A 4O3XB 2XTRA 4K3CA 4B61A 2WVPA 1P4TA 5KAIO 4AKRB 3PORA 3HWBA 1GFPA 1IZNA 2KC0A 2XE3A 3NSGA 4FRTA 4O4UA 3SY7A 2FGRA 3AAAB 3HOLA 1Q9GA 3SZVA 1MM5A 2QTKA 4LSIA 4E1SA 3DWOX 2LFUA 4O3ZA 1IZNB 2XE1A 3DA3A 3PGRA 4G76A 4AYID 1ZHZA 3UPGA 4IL6O 4C69X 3O0EA 1GFOA 3G7GA 5GTIO 3SY9A 4AYNA 5ADXL 3POUA 5GV0A 1G90A 3AAEA 4KR8A 4AFKA 4K3BA 2R4OA 2YNKA 1GFNA 5ADXK 4JCHA 4QQ1A 3AA7A 5G39A 3NJTA 4UB6O 4PJ0O 4AYEC 4D65A 7PRNA 3AA0A 3AAEB 3LK41 3UU2A 5JDPA 3LK42 2R4NA 3WI5A 3C5OA 3KZIO 4GCSA 5H2FO 4LSEA 3HW9A 3AA7B 3JCUO 4O49A 3A0HO 3AA0B 5FVNA 1BXWA 5DL6A 5DL5A 2ZFGA 5TISO 4AKMA 4RLBA 3VY8X 1H6S1 2X9KA 3BS0A 4GHBA 2IWWA 6PRNA 4XNKA 1GFQA 2LHFA 2X27X 2Y0LA 2MNHA 4N75A 3SYBA 1PHOA 2JQYA 5D5DA 2XE5A 5EE2A 3VE2A
chains in the Genus database with same CATH topology
4AYDC 3A2SX 2Y7SA 5T5FA 2KDYA 4GCQA 4O3WA 4AYMC 1HXTA 3LK3A 3HOEA 3AA1A 5DL8A 5IYUA 4FUVA 1ZHYA 4FSPA 3VZTX 2F1VA 1BH3A 3LK3B 2F1TA 3AA1B 4GF4A 3V8UA 2Y0KA 2K4TA 4XNLA 2N2MA 1PRNA 1ZHTA 2M07A 5PRNA 3VZWX 2JMMA 4BUMX 2Y2XA 3POQA 1BT9A 4LSFA 2XTQA 2GE4A 3RBHA 2M06A 4FZLA 5DL7A 4E1TA 2MHLA 1OSMA 3QRAA 4G75A 2KZ7A 4FZMA 1QJ9A 3LK2A 4FESA 3POXA 4F4BA 3K19A 2N2LA 4GCPA 4O4XA 1HXUA 2KZ7B 4FT6A 2O4VA 3VZUX 3LK2B 2J4UP 3QRCA 1ZHXA 3UAQA 2ERVA 2J1NA 2Y0HA 1MPFA 4KRAA 2OMFA 1QJPA 4FMSA 4D64A 3AAAA 4LSHA 3DA4A 1YS5A 2KXPA 3PQUA 4O3YA 1OPFA 3SYSA 2W81C 3EMNX 3T20A 3WI4A 4FZNA 2K0LA 1GFMA 4KR4A 5G26A 2XE2A 2KXPB 4JFBA 3JTYA 1Q9FA 2PORA 1THQA 4N59A 5AFUL 1QJ8A 2PRNA 2ZLDA 3PQSA 4D5UA 4U9CA 3T0SA 5AFUK 4FOZA 2XMXA 3AA6A 4AZLA 4RL9A 3KVDD 4AUIA 3FYXA 4RLCA 3VY9X 1ZHWA 3SZDA 1ORMA 1MM4A 8PRNA 3GP6A 2ODJA 2YPVA 3AA6B 4RJWA 1HXXA 2W80C 1E54A 2XG6A 3PRNA 2FGQX 4PUXA 4FSOA 3VE1A 3T24A 4AKRA 4Z3TA 4FRXA 3TZGA 4RJXA 4N58A 4O3XB 2XTRA 4B61A 1P4TA 4AKRB 3PORA 3HWBA 1GFPA 1IZNA 2KC0A 2XE3A 3NSGA 4FRTA 4O4UA 3SY7A 2FGRA 3AAAB 3HOLA 1Q9GA 3SZVA 1MM5A 2QTKA 4LSIA 4E1SA 2LFUA 4O3ZA 1IZNB 2XE1A 3DA3A 4G76A 4AYID 1ZHZA 3UPGA 4C69X 3O0EA 1GFOA 3G7GA 4AYNA 3SY9A 5ADXL 1G90A 3POUA 5GV0A 3AAEA 4KR8A 4AFKA 2YNKA 5ADXK 1GFNA 4JCHA 4QQ1A 3AA7A 4AYEC 4D65A 7PRNA 3AA0A 3AAEB 3LK41 3UU2A 5JDPA 3LK42 3WI5A 3C5OA 4GCSA 4LSEA 3HW9A 3AA7B 4O49A 3AA0B 5FVNA 1BXWA 5DL6A 5DL5A 2ZFGA 4AKMA 4RLBA 3VY8X 1H6S1 4GHBA 6PRNA 4XNKA 1GFQA 2LHFA 2X27X 2Y0LA 2MNHA 3SYBA 1PHOA 5D5DA 2XE5A 5EE2A 3VE2A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3A2S X;  4GCQ A;  1HXT A;  5DL8 A;  4FSP A;  3VZT X;  1BH3 A;  2Y0K A;  2K4T A;  1PRN A;  5PRN A;  3VZW X;  4BUM X;  2Y2X A;  3POQ A;  1BT9 A;  4LSF A;  5DL7 A;  1OSM A;  3POX A;  3K19 A;  4GCP A;  1HXU A;  4FT6 A;  2O4V A;  3VZU X;  2J4U P;  2J1N A;  2Y0H A;  1MPF A;  4KRA A;  2OMF A;  4FMS A;  4D64 A;  4LSH A;  3SYS A;  1OPF A;  3EMN X;  3T20 A;  3WI4 A;  1GFM A;  4KR4 A;  2XE2 A;  4JFB A;  3JTY A;  2POR A;  2PRN A;  2ZLD A;  4D5U A;  3T0S A;  4FOZ A;  4AUI A;  3FYX A;  3VY9 X;  3SZD A;  8PRN A;  2ODJ A;  4RJW A;  1HXX A;  2XG6 A;  1E54 A;  3PRN A;  2FGQ X;  4FSO A;  3T24 A;  4FRX A;  4RJX A;  3POR A;  3HWB A;  1GFP A;  2XE3 A;  4FRT A;  3NSG A;  3SZV A;  3SY7 A;  2FGR A;  4LSI A;  2QTK A;  2XE1 A;  3UPG A;  4C69 X;  3O0E A;  1GFO A;  3SY9 A;  3POU A;  4KR8 A;  1GFN A;  4D65 A;  7PRN A;  3UU2 A;  5JDP A;  3WI5 A;  4GCS A;  4LSE A;  3HW9 A;  5FVN A;  5DL6 A;  5DL5 A;  2ZFG A;  3VY8 X;  1H6S 1;  6PRN A;  1GFQ A;  2Y0L A;  3SYB A;  1PHO A;  2XE5 A; 
#chains in the Genus database with same CATH topology
 4AYD C;  3A2S X;  2Y7S A;  5T5F A;  2KDY A;  2R4L A;  4GCQ A;  4O3W A;  4AYM C;  1HXT A;  3LK3 A;  3HOE A;  3AA1 A;  5DL8 A;  5IYU A;  4FUV A;  1ZHY A;  4FSP A;  3VZT X;  2F1V A;  1S5L O;  1BH3 A;  2R89 A;  3LK3 B;  2F1T A;  3AA1 B;  4GF4 A;  3V8U A;  2Y0K A;  2K4T A;  4XNL A;  2N2M A;  1PRN A;  3PGU A;  1ZHT A;  2M07 A;  3PGS A;  2IWV A;  5PRN A;  2JMM A;  3VZW X;  5GTH O;  4FQE A;  3DWN A;  4N74 A;  4BUM X;  5B5E O;  2Y2X A;  3POQ A;  1BT9 A;  4LSF A;  2XTQ A;  2GE4 A;  3PF1 A;  2M06 A;  4UB8 O;  3RBH A;  4FZL A;  5DL7 A;  4C00 A;  4E1T A;  2MHL A;  1OSM A;  3QRA A;  4G75 A;  5E79 O;  2F1C X;  2KZ7 A;  3A0B O;  4FZM A;  1QJ9 A;  2R8A A;  3LK2 A;  4FES A;  1T16 A;  3POX A;  3WU2 O;  4F4B A;  3K19 A;  2N2L A;  4GCP A;  4O4X A;  1HXU A;  2KZ7 B;  4FT6 A;  2O4V A;  3BRZ A;  3VZU X;  3LK2 B;  2J4U P;  3QRC A;  4CTD A;  1ZHX A;  3UAQ A;  2ERV A;  2J1N A;  2Y0H A;  1MPF A;  4KRA A;  2OMF A;  1QJP A;  4FMS A;  4D64 A;  3AAA A;  4LSH A;  3DA4 A;  1YS5 A;  2KXP A;  2WJR A;  3PQU A;  1OPF A;  1T1L A;  2W81 C;  3EMN X;  4O3Y A;  3SYS A;  4PR7 A;  3WI4 A;  3T20 A;  4FZN A;  2K0L A;  1GFM A;  4KR4 A;  5G26 A;  5G3A A;  2XE2 A;  2KXP B;  4JFB A;  3JTY A;  1Q9F A;  2POR A;  4C4V A;  1THQ A;  4N59 A;  5AFU L;  1QJ8 A;  2PRN A;  2ZLD A;  3PQS A;  2R4P A;  5KAF O;  4U9C A;  3T0S A;  4D5U A;  5AFU K;  5G38 A;  4FOZ A;  4C4V B;  2XMX A;  3AA6 A;  2R88 A;  2AXT O;  2WJQ A;  4AZL A;  4RL9 A;  5B66 O;  3KVD D;  4AUI A;  3FYX A;  4RLC A;  3VY9 X;  1ZHW A;  3SZD A;  1ORM A;  1MM4 A;  8PRN A;  3GP6 A;  3BRY A;  2ODJ A;  2YPV A;  3AA6 B;  4RJW A;  1HXX A;  2W80 C;  1E54 A;  2XG6 A;  3PRN A;  2FGQ X;  4PUX A;  4FSO A;  3VE1 A;  3T24 A;  4AKR A;  4Z3T A;  4FRX A;  3DZM A;  3TZG A;  4RJX A;  4N58 A;  4O3X B;  2XTR A;  4K3C A;  4B61 A;  2WVP A;  1P4T A;  5KAI O;  4AKR B;  3POR A;  3HWB A;  1GFP A;  1IZN A;  2KC0 A;  2XE3 A;  3NSG A;  4FRT A;  4O4U A;  3SY7 A;  2FGR A;  3AAA B;  3HOL A;  1Q9G A;  3SZV A;  1MM5 A;  2QTK A;  4LSI A;  4E1S A;  3DWO X;  2LFU A;  4O3Z A;  1IZN B;  2XE1 A;  3DA3 A;  3PGR A;  4G76 A;  4AYI D;  1ZHZ A;  3UPG A;  4IL6 O;  4C69 X;  3O0E A;  1GFO A;  3G7G A;  5GTI O;  3SY9 A;  4AYN A;  5ADX L;  3POU A;  5GV0 A;  1G90 A;  3AAE A;  4KR8 A;  4AFK A;  4K3B A;  2R4O A;  2YNK A;  1GFN A;  5ADX K;  4JCH A;  4QQ1 A;  3AA7 A;  5G39 A;  3NJT A;  4UB6 O;  4PJ0 O;  4AYE C;  4D65 A;  7PRN A;  3AA0 A;  3AAE B;  3LK4 1;  3UU2 A;  5JDP A;  3LK4 2;  2R4N A;  3WI5 A;  3C5O A;  3KZI O;  4GCS A;  5H2F O;  4LSE A;  3HW9 A;  3AA7 B;  3JCU O;  4O49 A;  3A0H O;  3AA0 B;  5FVN A;  1BXW A;  5DL6 A;  5DL5 A;  2ZFG A;  5TIS O;  4AKM A;  4RLB A;  3VY8 X;  1H6S 1;  2X9K A;  3BS0 A;  4GHB A;  2IWW A;  6PRN A;  4XNK A;  1GFQ A;  2LHF A;  2X27 X;  2Y0L A;  2MNH A;  4N75 A;  3SYB A;  1PHO A;  2JQY A;  5D5D A;  2XE5 A;  5EE2 A;  3VE2 A; 
#chains in the Genus database with same CATH homology
 4AYD C;  3A2S X;  2Y7S A;  5T5F A;  2KDY A;  4GCQ A;  4O3W A;  4AYM C;  1HXT A;  3LK3 A;  3HOE A;  3AA1 A;  5DL8 A;  5IYU A;  4FUV A;  1ZHY A;  4FSP A;  3VZT X;  2F1V A;  1BH3 A;  3LK3 B;  2F1T A;  3AA1 B;  4GF4 A;  3V8U A;  2Y0K A;  2K4T A;  4XNL A;  2N2M A;  1PRN A;  1ZHT A;  2M07 A;  5PRN A;  3VZW X;  2JMM A;  4BUM X;  2Y2X A;  3POQ A;  1BT9 A;  4LSF A;  2XTQ A;  2GE4 A;  3RBH A;  2M06 A;  4FZL A;  5DL7 A;  4E1T A;  2MHL A;  1OSM A;  3QRA A;  4G75 A;  2KZ7 A;  4FZM A;  1QJ9 A;  3LK2 A;  4FES A;  3POX A;  4F4B A;  3K19 A;  2N2L A;  4GCP A;  4O4X A;  1HXU A;  2KZ7 B;  4FT6 A;  2O4V A;  3VZU X;  3LK2 B;  2J4U P;  3QRC A;  1ZHX A;  3UAQ A;  2ERV A;  2J1N A;  2Y0H A;  1MPF A;  4KRA A;  2OMF A;  1QJP A;  4FMS A;  4D64 A;  3AAA A;  4LSH A;  3DA4 A;  1YS5 A;  2KXP A;  3PQU A;  4O3Y A;  1OPF A;  3SYS A;  2W81 C;  3EMN X;  3T20 A;  3WI4 A;  4FZN A;  2K0L A;  1GFM A;  4KR4 A;  5G26 A;  2XE2 A;  2KXP B;  4JFB A;  3JTY A;  1Q9F A;  2POR A;  1THQ A;  4N59 A;  5AFU L;  1QJ8 A;  2PRN A;  2ZLD A;  3PQS A;  4D5U A;  4U9C A;  3T0S A;  5AFU K;  4FOZ A;  2XMX A;  3AA6 A;  4AZL A;  4RL9 A;  3KVD D;  4AUI A;  3FYX A;  4RLC A;  3VY9 X;  1ZHW A;  3SZD A;  1ORM A;  1MM4 A;  8PRN A;  3GP6 A;  2ODJ A;  2YPV A;  3AA6 B;  4RJW A;  1HXX A;  2W80 C;  1E54 A;  2XG6 A;  3PRN A;  2FGQ X;  4PUX A;  4FSO A;  3VE1 A;  3T24 A;  4AKR A;  4Z3T A;  4FRX A;  3TZG A;  4RJX A;  4N58 A;  4O3X B;  2XTR A;  4B61 A;  1P4T A;  4AKR B;  3POR A;  3HWB A;  1GFP A;  1IZN A;  2KC0 A;  2XE3 A;  3NSG A;  4FRT A;  4O4U A;  3SY7 A;  2FGR A;  3AAA B;  3HOL A;  1Q9G A;  3SZV A;  1MM5 A;  2QTK A;  4LSI A;  4E1S A;  2LFU A;  4O3Z A;  1IZN B;  2XE1 A;  3DA3 A;  4G76 A;  4AYI D;  1ZHZ A;  3UPG A;  4C69 X;  3O0E A;  1GFO A;  3G7G A;  4AYN A;  3SY9 A;  5ADX L;  1G90 A;  3POU A;  5GV0 A;  3AAE A;  4KR8 A;  4AFK A;  2YNK A;  5ADX K;  1GFN A;  4JCH A;  4QQ1 A;  3AA7 A;  4AYE C;  4D65 A;  7PRN A;  3AA0 A;  3AAE B;  3LK4 1;  3UU2 A;  5JDP A;  3LK4 2;  3WI5 A;  3C5O A;  4GCS A;  4LSE A;  3HW9 A;  3AA7 B;  4O49 A;  3AA0 B;  5FVN A;  1BXW A;  5DL6 A;  5DL5 A;  2ZFG A;  4AKM A;  4RLB A;  3VY8 X;  1H6S 1;  4GHB A;  6PRN A;  4XNK A;  1GFQ A;  2LHF A;  2X27 X;  2Y0L A;  2MNH A;  3SYB A;  1PHO A;  5D5D A;  2XE5 A;  5EE2 A;  3VE2 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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