1E54A

Anion-selective porin from comamonas acidovorans
Total Genus 95
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
95
sequence length
332
structure length
332
Chain Sequence
ESSVTLFGIVDTNVAYVNKDAAGDSRYGLGTSGASTSRLGLRGTEDLGGGLKAGFWLEGEIFGDDGNASGFNFKRRSTVSLSGNFGEVRLGRDLVPTSQKLTSYDLFSATGIGPFMGFRNWAAGQGADDNGIRANNLISYYTPNFGGFNAGFGYAFDEKQTIGTADSVGRYIGGYVAYDNGPLSASLGLAQQKTAVGGLATDRDEITLGASYNFGVAKLSGLLQQTKFKRDIGGDIKTNSYMLGASAPVGGVGEVKLQYALYDQKAIDSKAHQITLGYVHNLSKRTALYGNLAFLKNKDASTLGLQAKGVYAGGVQAGESQTGVQVGIRHAF
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Outer membrane protein
publication title Crystal Structure of Omp32, the Anion-Selective Porin from Comamonas Acidovorans, in Complex with a Periplasmic Peptideat 2.1 A Resolution
pubmed doi rcsb
molecule keywords OUTER MEMBRANE PORIN PROTEIN 32
total genus 95
structure length 332
sequence length 332
ec nomenclature
pdb deposition date 2000-07-17
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.160.10 Mainly Beta Beta Barrel Porin Porin 1e54A00
3FYXA 4LSHA 2OMFA 2ZLDA 5DL7A 1GFPA 8PRNA 2Y0KA 4FRXA 1BT9A 3T20A 2ODJA 3POXA 3K19A 3A2SX 2O4VA 3HW9A 3PORA 2XE3A 3POUA 2QTKA 1PRNA 4AUIA 1H6S1 1OSMA 3POQA 2K4TA 4GCPA 3VZTX 4BUMX 4KR4A 2XE2A 4GCQA 1MPFA 5JDPA 4FSOA 4LSFA 2Y0LA 3SZDA 3HWBA 3T24A 1HXUA 3VY8X 2Y2XA 3SYBA 4LSIA 3SY7A 4FSPA 3JTYA 3UPGA 2XE5A 3VZWX 4GCSA 2XE1A 3VZUX 1GFMA 4D5UA 3VY9X 3SY9A 3PRNA 2Y0HA 6PRNA 4D64A 2J1NA 3UU2A 5DL6A 7PRNA 4FT6A 2ZFGA 1E54A 4RJXA 5DL8A 2FGRA 2XG6A 1OPFA 1HXTA 1GFQA 1BH3A 1GFOA 4RJWA 5DL5A 3NSGA 2FGQX 1HXXA 3SYSA 4LSEA 1PHOA 5FVNA 3SZVA 4KRAA 3WI4A 2J4UP 3EMNX 4FRTA 4JFBA 4FOZA 3T0SA 3WI5A 4KR8A 1GFNA 5PRNA 4C69X 2PRNA 4D65A 3O0EA 2PORA 4FMSA
chains in the Genus database with same CATH superfamily
3FYXA 3LK3A 2OMFA 4LSHA 2ZLDA 3BRZA 4AYMC 4CTDA 3BS0A 3AA6A 4PR7A 2R4LA 3RBHA 3G7GA 4FUVA 5GV0A 5DL7A 2R88A 1GFPA 8PRNA 3AA0B 4G76A 4GF4A 2Y0KA 4FRXA 4N59A 3A0BO 5KAIO 1BT9A 3TZGA 3KVDD 4AYNA 3T20A 2R4PA 2ODJA 3POXA 2N2MA 2MNHA 2WJRA 2YNKA 3A2SX 3K19A 1QJ8A 2M07A 5D5DA 2O4VA 4RLCA 1IZNB 4UB6O 5GTIO 4FMSA 2KXPA 3HW9A 3PORA 5KAFO 4AKMA 2XE3A 2JQYA 3POUA 2QTKA 3C5OA 3AA1B 3HOLA 1PRNA 3PGRA 4AUIA 1H6S1 1OSMA 3DZMA 3AAAB 3POQA 3V8UA 2K4TA 4AKRB 5ADXL 2K0LA 4RLBA 5B66O 4GCPA 5T5FA 3VZTX 4BUMX 4C00A 2AXTO 2LHFA 4KR4A 2XE2A 4GCQA 5E79O 2W81C 5H2FO 1MPFA 2X27X 5G39A 5JDPA 3LK3B 4FSOA 3PGSA 4LSFA 1ZHXA 2Y0LA 4PUXA 3AA6B 2R89A 3AA7A 4XNLA 3SZDA 3UAQA 1YS5A 1ZHZA 3DWNA 3HWBA 3PQUA 4O3WA 2W80C 2N2LA 3DWOX 4QQ1A 1QJ9A 2LFUA 4O4UA 3VE2A 3T24A 3GP6A 1ORMA 1HXUA 1THQA 4AYID 3VY8X 2Y2XA 2IWVA 5B5EO 2JMMA 3SYBA 5GTHO 3KZIO 3WU2O 3PF1A 4LSIA 4PJ0O 3SY7A 2KC0A 4FSPA 3JTYA 3UPGA 2KXPB 2XE5A 2KZ7A 2R8AA 4F4BA 1ZHWA 3LK41 3BRYA 4XNKA 3VZWX 1Q9GA 4FZMA 5AFUL 2YPVA 2M06A 3LK42 4GCSA 2XE1A 4IL6O 4C4VA 3VZUX 1GFMA 2WJQA 3DA4A 4N75A 2R4NA 4FZLA 3AAEA 2X9KA 4D5UA 5ADXK 3VY9X 3JCUO 3LK2A 4E1TA 5AFUK 1S5LO 5G38A 2MHLA 3SY9A 3PRNA 2Y0HA 3AA7B 6PRNA 4D64A 2J1NA 3A0HO 3UU2A 1T16A 5IYUA 5DL6A 5G3AA 2F1TA 4O3XB 7PRNA 2KDYA 4FT6A 1T1LA 2ZFGA 4FESA 1E54A 2F1VA 4O3YA 4RJXA 5DL8A 2FGRA 4U9CA 4N58A 2XG6A 4AFKA 3NJTA 2XMXA 2F1CX 1OPFA 3PQSA 1HXTA 4UB8O 1GFQA 4E1SA 1BH3A 1GFOA 2XTQA 1MM5A 3QRCA 3AA0A 4RL9A 4RJWA 3NSGA 2KZ7B 5DL5A 4Z3TA 2FGQX 4FZNA 1HXXA 5TISO 3HOEA 3SYSA 2IWWA 4LSEA 1PHOA 2R4OA 3QRAA 2WVPA 1ZHTA 2ERVA 4C4VB 4K3BA 4O4XA 5FVNA 5G26A 4AYDC 1IZNA 3PGUA 4O49A 4N74A 3SZVA 3AAEB 1MM4A 2XTRA 4KRAA 3WI4A 1P4TA 2J4UP 3EMNX 3LK2B 4FRTA 4G75A 4GHBA 4JFBA 4K3CA 2GE4A 4FOZA 5EE2A 3AA1A 3VE1A 1BXWA 2Y7SA 4AZLA 1ZHYA 3T0SA 4AYEC 3WI5A 4B61A 3AAAA 4FQEA 4AKRA 4KR8A 1Q9FA 1G90A 1GFNA 5PRNA 3DA3A 4O3ZA 4C69X 2PRNA 4JCHA 4D65A 3O0EA 2PORA 1QJPA
chains in the Genus database with same CATH topology
3FYXA 3LK3A 2OMFA 4LSHA 2ZLDA 4AYMC 3AA6A 3RBHA 3G7GA 4FUVA 5GV0A 5DL7A 1GFPA 8PRNA 3AA0B 4G76A 4GF4A 2Y0KA 4FRXA 4N59A 4AYNA 3TZGA 1BT9A 4E1TA 3KVDD 3T20A 2ODJA 3POXA 2N2MA 2MNHA 2YNKA 3A2SX 3K19A 1QJ8A 2M07A 5D5DA 2O4VA 4RLCA 1IZNB 4FMSA 2KXPA 3HW9A 3PORA 4AKMA 2XE3A 3POUA 2QTKA 3C5OA 3AA1B 3HOLA 1PRNA 4AUIA 1H6S1 1OSMA 3AAAB 3POQA 3V8UA 2K4TA 4AKRB 5ADXL 2K0LA 4RLBA 4GCPA 5T5FA 3VZTX 4BUMX 2LHFA 4KR4A 2XE2A 4GCQA 2W81C 1MPFA 2X27X 5JDPA 3LK3B 4FSOA 4LSFA 1ZHXA 2Y0LA 4PUXA 3AA6B 3AA7A 4XNLA 3SZDA 3UAQA 1YS5A 1ZHZA 3HWBA 3PQUA 4O3WA 2W80C 2N2LA 4QQ1A 3VE2A 1QJ9A 2LFUA 4O4UA 3T24A 3GP6A 1ORMA 1HXUA 1THQA 4AYID 3VY8X 2Y2XA 2JMMA 3SYBA 4LSIA 3SY7A 2KC0A 4FSPA 3JTYA 3UPGA 2KXPB 2XE5A 2KZ7A 4F4BA 1ZHWA 3LK41 4XNKA 3VZWX 1Q9GA 4FZMA 5AFUL 2YPVA 2M06A 3LK42 4GCSA 2XE1A 3VZUX 1GFMA 3DA4A 4FZLA 3AAEA 4D5UA 5ADXK 3VY9X 3LK2A 5AFUK 2MHLA 3SY9A 3PRNA 2Y0HA 3AA7B 6PRNA 4D64A 2J1NA 3UU2A 5IYUA 5DL6A 2F1TA 4O3XB 7PRNA 2KDYA 4FT6A 2ZFGA 4FESA 1E54A 2F1VA 4O3YA 4RJXA 5DL8A 2FGRA 4U9CA 4N58A 2XG6A 4AFKA 3PQSA 2XMXA 1OPFA 4E1SA 1HXTA 1GFQA 1BH3A 1GFOA 2XTQA 1MM5A 3QRCA 3AA0A 4RL9A 4RJWA 3NSGA 2KZ7B 5DL5A 4Z3TA 2FGQX 4FZNA 1HXXA 3HOEA 3SYSA 4LSEA 1PHOA 3QRAA 1ZHTA 2ERVA 4O4XA 5FVNA 5G26A 4AYDC 1IZNA 4O49A 3SZVA 3AAEB 1MM4A 2XTRA 4KRAA 3WI4A 1P4TA 2J4UP 3EMNX 3LK2B 4FRTA 4G75A 4GHBA 4JFBA 5EE2A 2GE4A 4FOZA 3VE1A 3AA1A 1BXWA 2Y7SA 4AZLA 1ZHYA 3T0SA 4AYEC 3WI5A 4B61A 3AAAA 4AKRA 4KR8A 1Q9FA 1G90A 1GFNA 5PRNA 3DA3A 4O3ZA 4C69X 2PRNA 4JCHA 4D65A 3O0EA 2PORA 1QJPA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3FYX A;  4LSH A;  2OMF A;  2ZLD A;  5DL7 A;  1GFP A;  8PRN A;  2Y0K A;  4FRX A;  1BT9 A;  3T20 A;  2ODJ A;  3POX A;  3K19 A;  3A2S X;  2O4V A;  3HW9 A;  3POR A;  2XE3 A;  3POU A;  2QTK A;  1PRN A;  4AUI A;  1H6S 1;  1OSM A;  3POQ A;  2K4T A;  4GCP A;  3VZT X;  4BUM X;  4KR4 A;  2XE2 A;  4GCQ A;  1MPF A;  5JDP A;  4FSO A;  4LSF A;  2Y0L A;  3SZD A;  3HWB A;  3T24 A;  1HXU A;  3VY8 X;  2Y2X A;  3SYB A;  4LSI A;  3SY7 A;  4FSP A;  3JTY A;  3UPG A;  2XE5 A;  3VZW X;  4GCS A;  2XE1 A;  3VZU X;  1GFM A;  4D5U A;  3VY9 X;  3SY9 A;  3PRN A;  2Y0H A;  6PRN A;  4D64 A;  2J1N A;  3UU2 A;  5DL6 A;  7PRN A;  4FT6 A;  2ZFG A;  1E54 A;  4RJX A;  5DL8 A;  2FGR A;  2XG6 A;  1OPF A;  1HXT A;  1GFQ A;  1BH3 A;  1GFO A;  4RJW A;  5DL5 A;  3NSG A;  2FGQ X;  1HXX A;  3SYS A;  4LSE A;  1PHO A;  5FVN A;  3SZV A;  4KRA A;  3WI4 A;  2J4U P;  3EMN X;  4FRT A;  4JFB A;  4FOZ A;  3T0S A;  3WI5 A;  4KR8 A;  1GFN A;  5PRN A;  4C69 X;  2PRN A;  4D65 A;  3O0E A;  2POR A;  4FMS A; 
#chains in the Genus database with same CATH topology
 3FYX A;  3LK3 A;  2OMF A;  4LSH A;  2ZLD A;  3BRZ A;  4AYM C;  4CTD A;  3BS0 A;  3AA6 A;  4PR7 A;  2R4L A;  3RBH A;  3G7G A;  4FUV A;  5GV0 A;  5DL7 A;  2R88 A;  1GFP A;  8PRN A;  3AA0 B;  4G76 A;  4GF4 A;  2Y0K A;  4FRX A;  4N59 A;  3A0B O;  5KAI O;  1BT9 A;  3TZG A;  3KVD D;  4AYN A;  3T20 A;  2R4P A;  2ODJ A;  3POX A;  2N2M A;  2MNH A;  2WJR A;  2YNK A;  3A2S X;  3K19 A;  1QJ8 A;  2M07 A;  5D5D A;  2O4V A;  4RLC A;  1IZN B;  4UB6 O;  5GTI O;  4FMS A;  2KXP A;  3HW9 A;  3POR A;  5KAF O;  4AKM A;  2XE3 A;  2JQY A;  3POU A;  2QTK A;  3C5O A;  3AA1 B;  3HOL A;  1PRN A;  3PGR A;  4AUI A;  1H6S 1;  1OSM A;  3DZM A;  3AAA B;  3POQ A;  3V8U A;  2K4T A;  4AKR B;  5ADX L;  2K0L A;  4RLB A;  5B66 O;  4GCP A;  5T5F A;  3VZT X;  4BUM X;  4C00 A;  2AXT O;  2LHF A;  4KR4 A;  2XE2 A;  4GCQ A;  5E79 O;  2W81 C;  5H2F O;  1MPF A;  2X27 X;  5G39 A;  5JDP A;  3LK3 B;  4FSO A;  3PGS A;  4LSF A;  1ZHX A;  2Y0L A;  4PUX A;  3AA6 B;  2R89 A;  3AA7 A;  4XNL A;  3SZD A;  3UAQ A;  1YS5 A;  1ZHZ A;  3DWN A;  3HWB A;  3PQU A;  4O3W A;  2W80 C;  2N2L A;  3DWO X;  4QQ1 A;  1QJ9 A;  2LFU A;  4O4U A;  3VE2 A;  3T24 A;  3GP6 A;  1ORM A;  1HXU A;  1THQ A;  4AYI D;  3VY8 X;  2Y2X A;  2IWV A;  5B5E O;  2JMM A;  3SYB A;  5GTH O;  3KZI O;  3WU2 O;  3PF1 A;  4LSI A;  4PJ0 O;  3SY7 A;  2KC0 A;  4FSP A;  3JTY A;  3UPG A;  2KXP B;  2XE5 A;  2KZ7 A;  2R8A A;  4F4B A;  1ZHW A;  3LK4 1;  3BRY A;  4XNK A;  3VZW X;  1Q9G A;  4FZM A;  5AFU L;  2YPV A;  2M06 A;  3LK4 2;  4GCS A;  2XE1 A;  4IL6 O;  4C4V A;  3VZU X;  1GFM A;  2WJQ A;  3DA4 A;  4N75 A;  2R4N A;  4FZL A;  3AAE A;  2X9K A;  4D5U A;  5ADX K;  3VY9 X;  3JCU O;  3LK2 A;  4E1T A;  5AFU K;  1S5L O;  5G38 A;  2MHL A;  3SY9 A;  3PRN A;  2Y0H A;  3AA7 B;  6PRN A;  4D64 A;  2J1N A;  3A0H O;  3UU2 A;  1T16 A;  5IYU A;  5DL6 A;  5G3A A;  2F1T A;  4O3X B;  7PRN A;  2KDY A;  4FT6 A;  1T1L A;  2ZFG A;  4FES A;  1E54 A;  2F1V A;  4O3Y A;  4RJX A;  5DL8 A;  2FGR A;  4U9C A;  4N58 A;  2XG6 A;  4AFK A;  3NJT A;  2XMX A;  2F1C X;  1OPF A;  3PQS A;  1HXT A;  4UB8 O;  1GFQ A;  4E1S A;  1BH3 A;  1GFO A;  2XTQ A;  1MM5 A;  3QRC A;  3AA0 A;  4RL9 A;  4RJW A;  3NSG A;  2KZ7 B;  5DL5 A;  4Z3T A;  2FGQ X;  4FZN A;  1HXX A;  5TIS O;  3HOE A;  3SYS A;  2IWW A;  4LSE A;  1PHO A;  2R4O A;  3QRA A;  2WVP A;  1ZHT A;  2ERV A;  4C4V B;  4K3B A;  4O4X A;  5FVN A;  5G26 A;  4AYD C;  1IZN A;  3PGU A;  4O49 A;  4N74 A;  3SZV A;  3AAE B;  1MM4 A;  2XTR A;  4KRA A;  3WI4 A;  1P4T A;  2J4U P;  3EMN X;  3LK2 B;  4FRT A;  4G75 A;  4GHB A;  4JFB A;  4K3C A;  2GE4 A;  4FOZ A;  5EE2 A;  3AA1 A;  3VE1 A;  1BXW A;  2Y7S A;  4AZL A;  1ZHY A;  3T0S A;  4AYE C;  3WI5 A;  4B61 A;  3AAA A;  4FQE A;  4AKR A;  4KR8 A;  1Q9F A;  1G90 A;  1GFN A;  5PRN A;  3DA3 A;  4O3Z A;  4C69 X;  2PRN A;  4JCH A;  4D65 A;  3O0E A;  2POR A;  1QJP A; 
#chains in the Genus database with same CATH homology
 3FYX A;  3LK3 A;  2OMF A;  4LSH A;  2ZLD A;  4AYM C;  3AA6 A;  3RBH A;  3G7G A;  4FUV A;  5GV0 A;  5DL7 A;  1GFP A;  8PRN A;  3AA0 B;  4G76 A;  4GF4 A;  2Y0K A;  4FRX A;  4N59 A;  4AYN A;  3TZG A;  1BT9 A;  4E1T A;  3KVD D;  3T20 A;  2ODJ A;  3POX A;  2N2M A;  2MNH A;  2YNK A;  3A2S X;  3K19 A;  1QJ8 A;  2M07 A;  5D5D A;  2O4V A;  4RLC A;  1IZN B;  4FMS A;  2KXP A;  3HW9 A;  3POR A;  4AKM A;  2XE3 A;  3POU A;  2QTK A;  3C5O A;  3AA1 B;  3HOL A;  1PRN A;  4AUI A;  1H6S 1;  1OSM A;  3AAA B;  3POQ A;  3V8U A;  2K4T A;  4AKR B;  5ADX L;  2K0L A;  4RLB A;  4GCP A;  5T5F A;  3VZT X;  4BUM X;  2LHF A;  4KR4 A;  2XE2 A;  4GCQ A;  2W81 C;  1MPF A;  2X27 X;  5JDP A;  3LK3 B;  4FSO A;  4LSF A;  1ZHX A;  2Y0L A;  4PUX A;  3AA6 B;  3AA7 A;  4XNL A;  3SZD A;  3UAQ A;  1YS5 A;  1ZHZ A;  3HWB A;  3PQU A;  4O3W A;  2W80 C;  2N2L A;  4QQ1 A;  3VE2 A;  1QJ9 A;  2LFU A;  4O4U A;  3T24 A;  3GP6 A;  1ORM A;  1HXU A;  1THQ A;  4AYI D;  3VY8 X;  2Y2X A;  2JMM A;  3SYB A;  4LSI A;  3SY7 A;  2KC0 A;  4FSP A;  3JTY A;  3UPG A;  2KXP B;  2XE5 A;  2KZ7 A;  4F4B A;  1ZHW A;  3LK4 1;  4XNK A;  3VZW X;  1Q9G A;  4FZM A;  5AFU L;  2YPV A;  2M06 A;  3LK4 2;  4GCS A;  2XE1 A;  3VZU X;  1GFM A;  3DA4 A;  4FZL A;  3AAE A;  4D5U A;  5ADX K;  3VY9 X;  3LK2 A;  5AFU K;  2MHL A;  3SY9 A;  3PRN A;  2Y0H A;  3AA7 B;  6PRN A;  4D64 A;  2J1N A;  3UU2 A;  5IYU A;  5DL6 A;  2F1T A;  4O3X B;  7PRN A;  2KDY A;  4FT6 A;  2ZFG A;  4FES A;  1E54 A;  2F1V A;  4O3Y A;  4RJX A;  5DL8 A;  2FGR A;  4U9C A;  4N58 A;  2XG6 A;  4AFK A;  3PQS A;  2XMX A;  1OPF A;  4E1S A;  1HXT A;  1GFQ A;  1BH3 A;  1GFO A;  2XTQ A;  1MM5 A;  3QRC A;  3AA0 A;  4RL9 A;  4RJW A;  3NSG A;  2KZ7 B;  5DL5 A;  4Z3T A;  2FGQ X;  4FZN A;  1HXX A;  3HOE A;  3SYS A;  4LSE A;  1PHO A;  3QRA A;  1ZHT A;  2ERV A;  4O4X A;  5FVN A;  5G26 A;  4AYD C;  1IZN A;  4O49 A;  3SZV A;  3AAE B;  1MM4 A;  2XTR A;  4KRA A;  3WI4 A;  1P4T A;  2J4U P;  3EMN X;  3LK2 B;  4FRT A;  4G75 A;  4GHB A;  4JFB A;  5EE2 A;  2GE4 A;  4FOZ A;  3VE1 A;  3AA1 A;  1BXW A;  2Y7S A;  4AZL A;  1ZHY A;  3T0S A;  4AYE C;  3WI5 A;  4B61 A;  3AAA A;  4AKR A;  4KR8 A;  1Q9F A;  1G90 A;  1GFN A;  5PRN A;  3DA3 A;  4O3Z A;  4C69 X;  2PRN A;  4JCH A;  4D65 A;  3O0E A;  2POR A;  1QJP A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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