4RLBA

Crystal structure of acinetobacter baumannii caro2
Total Genus 62
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
62
sequence length
213
structure length
213
Chain Sequence
NQLIPVGARAEVGTTGYGGALLWQANPYVGLALGYNGGDISWSDDLSINGTKYDMDMDNKLAYLNAEIRPWGASTNPWAQGLYVAAGAAYVDNQYDLTKNVGTNASVEIDGNRFNGGANGVSIAGNLKYDNDIAPYIGFGFAPKFSKNWGVFGEVGAYYSGNPKVSLASNNDALIGSDGRTLGKTLDDQERKIANDDKYKWLPVGKVGVNFYW
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Membrane protein
molecule keywords Carbapenem-associated resistance protein
publication title Small-Molecule Transport by CarO, an Abundant Eight-Stranded beta-Barrel Outer Membrane Protein from Acinetobacter baumannii.
pubmed doi rcsb
source organism Acinetobacter baumannii
total genus 62
structure length 213
sequence length 213
chains with identical sequence B
ec nomenclature
pdb deposition date 2014-10-16
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.160.170 Mainly Beta Beta Barrel Porin Porin 4rlbA00
4RL9A 4FUVA 4RLBA
chains in the Genus database with same CATH superfamily
2FGRA 1E54A 2XE5A 2Y7SA 2IWWA 8PRNA 2Y0HA 5AFUK 2Y0KA 3VE2A 3UU2A 4FMSA 5B5EO 1PRNA 2LHFA 3KZIO 3NSGA 3PORA 4LSIA 3RBHA 1H6S1 2ODJA 4AKRB 1IZNA 2N2MA 1HXTA 2R88A 4O3ZA 4QQ1A 5KAFO 5T5FA 3UAQA 2W81C 3DA4A 4FZNA 2J1NA 4PUXA 3EMNX 1T1LA 3JCUO 4PR7A 4RLCA 5GTIO 3POXA 4C4VB 3SYBA 3LK2A 4AYID 4RJXA 4KRAA 3GP6A 5G26A 5FVNA 1MM5A 1QJ8A 3SYSA 2F1CX 3A0BO 3O0EA 5TISO 3V8UA 4E1SA 1BT9A 3AAAB 4XNLA 4O49A 2R8AA 4AUIA 4RJWA 4U9CA 3AAEA 3SY7A 1BXWA 5DL6A 2IWVA 4AKMA 2K4TA 4F4BA 3T0SA 3TZGA 1G90A 2Y0LA 3NJTA 3PGUA 1QJPA 1S5LO 2PRNA 4LSHA 2K0LA 4BUMX 4C4VA 3POUA 4AYMC 3AA0B 4O4UA 3AA1A 2YNKA 5B66O 5GTHO 2M06A 2QTKA 2ZFGA 1PHOA 2X9KA 3AAAA 4FSPA 4RLBA 5E79O 3SZVA 4AYDC 3BS0A 1ORMA 2KZ7A 1ZHZA 3WI4A 4LSFA 5DL8A 5PRNA 3WI5A 1OSMA 2JQYA 2WVPA 2KDYA 3AA0A 4G75A 1GFPA 2OMFA 4C69X 7PRNA 1P4TA 5DL5A 1HXUA 2F1VA 4FT6A 2ERVA 6PRNA 4JCHA 4FRXA 4AKRA 4AZLA 3VY9X 1MM4A 2YPVA 3BRYA 3HOLA 3LK3B 5G38A 2JMMA 2MNHA 4KR8A 3AA7B 4KR4A 4D64A 5G39A 5GV0A 3WU2O 1ZHTA 5H2FO 4D65A 4PJ0O 2XE3A 1ZHWA 3KVDD 2AXTO 3UPGA 3BRZA 2KXPB 2KC0A 2R4NA 4K3BA 4O4XA 4C00A 2R4PA 4XNKA 2WJRA 3POQA 4Z3TA 1MPFA 3LK3A 4K3CA 2XTRA 3QRAA 3A0HO 4O3WA 2XTQA 5G3AA 2GE4A 5JDPA 3HW9A 2XMXA 1GFOA 2LFUA 2O4VA 3FYXA 2R89A 2PORA 3QRCA 3HOEA 4O3XB 2XE2A 5AFUL 2FGQX 2MHLA 3A2SX 1GFMA 2XE1A 4FRTA 4FZLA 2R4LA 2W80C 4GCSA 4FSOA 4B61A 3VZUX 5ADXK 3PRNA 2F1TA 2N2LA 3LK42 3JTYA 1ZHXA 2M07A 3PQUA 1OPFA 1GFQA 1Q9FA 1BH3A 3PGSA 4GCQA 1Q9GA 3HWBA 1YS5A 4LSEA 4FUVA 3VE1A 3SZDA 3PF1A 4FQEA 3LK2B 3PQSA 4FESA 4N75A 3PGRA 4GF4A 3LK41 4RL9A 3DWNA 4JFBA 1T16A 4AYEC 3DA3A 4GCPA 5DL7A 5EE2A 3T24A 4N58A 4G76A 4UB6O 2XG6A 4O3YA 3AA6B 2X27X 3AAEB 4UB8O 5D5DA 3AA7A 3SY9A 4AYNA 5IYUA 1THQA 3C5OA 1QJ9A 4FOZA 3VY8X 4AFKA 3K19A 4N74A 1ZHYA 3DWOX 2KXPA 3AA1B 2WJQA 1GFNA 4D5UA 2ZLDA 2R4OA 3VZWX 2Y2XA 5KAIO 3AA6A 3VZTX 4E1TA 4GHBA 4CTDA 2KZ7B 3G7GA 3T20A 4IL6O 2J4UP 1IZNB 3DZMA 4N59A 1HXXA 4FZMA 5ADXL
chains in the Genus database with same CATH topology
2FGRA 1E54A 2XE5A 2Y7SA 8PRNA 2Y0HA 5AFUK 2Y0KA 3VE2A 3UU2A 4FMSA 1PRNA 2LHFA 3NSGA 3PORA 4LSIA 3RBHA 1H6S1 2ODJA 4AKRB 1IZNA 2N2MA 1HXTA 4O3ZA 4QQ1A 5T5FA 3UAQA 4AFKA 2W81C 3DA4A 4FZNA 2J1NA 4PUXA 3EMNX 4RLCA 3POXA 3SYBA 3LK2A 4AYID 4RJXA 4KRAA 3GP6A 5G26A 5FVNA 1MM5A 1QJ8A 3SYSA 3O0EA 4E1SA 3V8UA 1BT9A 3AAAB 4XNLA 4O49A 4AUIA 4RJWA 4U9CA 3AAEA 3SY7A 1BXWA 5DL6A 4AKMA 4F4BA 2K4TA 3T0SA 3TZGA 1G90A 2Y0LA 1QJPA 4LSHA 2PRNA 4BUMX 2K0LA 3POUA 4AYMC 3AA0B 4O4UA 3AA1A 2YNKA 2M06A 2QTKA 2ZFGA 1PHOA 3AAAA 4FSPA 4RLBA 3SZVA 4AYDC 1ORMA 2KZ7A 1ZHZA 3WI4A 4LSFA 5DL8A 5PRNA 3WI5A 1OSMA 4G75A 2KDYA 3AA0A 1GFPA 2OMFA 4C69X 7PRNA 1P4TA 5DL5A 1HXUA 2F1VA 4FT6A 2ERVA 6PRNA 4JCHA 4FRXA 4AKRA 4AZLA 3VY9X 1MM4A 2YPVA 3HOLA 3LK3B 2JMMA 2MNHA 4KR8A 3AA7B 4KR4A 4D64A 5GV0A 1ZHTA 4D65A 2XE3A 1ZHWA 3KVDD 3UPGA 4O4XA 2KXPB 2KC0A 4XNKA 3POQA 4Z3TA 1MPFA 3LK3A 2XTRA 3QRAA 4O3WA 2XTQA 2GE4A 5JDPA 3HW9A 2XMXA 1GFOA 2LFUA 2O4VA 3FYXA 2PORA 3QRCA 3HOEA 4O3XB 2XE2A 5AFUL 2FGQX 2MHLA 3A2SX 1GFMA 2XE1A 4FRTA 4FZLA 2W80C 4GCSA 4B61A 4FSOA 5ADXK 3VZUX 3PRNA 2F1TA 2N2LA 3LK42 3JTYA 1ZHXA 2M07A 3PQUA 1OPFA 1GFQA 1Q9FA 1BH3A 4GCQA 1Q9GA 3HWBA 1YS5A 4LSEA 4FUVA 3VE1A 3SZDA 3LK2B 3PQSA 4FESA 4GF4A 3LK41 4RL9A 4JFBA 4AYEC 3DA3A 4GCPA 5DL7A 5EE2A 3T24A 4N58A 4G76A 2XG6A 4O3YA 3AA6B 2X27X 3AAEB 5D5DA 3SY9A 3AA7A 4AYNA 5IYUA 1THQA 3C5OA 1QJ9A 4FOZA 3VY8X 3K19A 1ZHYA 2KXPA 3AA1B 1GFNA 4D5UA 2ZLDA 3VZWX 2Y2XA 3AA6A 3VZTX 4E1TA 4GHBA 2KZ7B 3G7GA 3T20A 2J4UP 1IZNB 4N59A 1HXXA 4FZMA 5ADXL
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4RL9 A;  4FUV A;  4RLB A; 
#chains in the Genus database with same CATH topology
 2FGR A;  1E54 A;  2XE5 A;  2Y7S A;  2IWW A;  8PRN A;  2Y0H A;  5AFU K;  2Y0K A;  3VE2 A;  3UU2 A;  4FMS A;  5B5E O;  1PRN A;  2LHF A;  3KZI O;  3NSG A;  3POR A;  4LSI A;  3RBH A;  1H6S 1;  2ODJ A;  4AKR B;  1IZN A;  2N2M A;  1HXT A;  2R88 A;  4O3Z A;  4QQ1 A;  5KAF O;  5T5F A;  3UAQ A;  2W81 C;  3DA4 A;  4FZN A;  2J1N A;  4PUX A;  3EMN X;  1T1L A;  3JCU O;  4PR7 A;  4RLC A;  5GTI O;  3POX A;  4C4V B;  3SYB A;  3LK2 A;  4AYI D;  4RJX A;  4KRA A;  3GP6 A;  5G26 A;  5FVN A;  1MM5 A;  1QJ8 A;  3SYS A;  2F1C X;  3A0B O;  3O0E A;  5TIS O;  3V8U A;  4E1S A;  1BT9 A;  3AAA B;  4XNL A;  4O49 A;  2R8A A;  4AUI A;  4RJW A;  4U9C A;  3AAE A;  3SY7 A;  1BXW A;  5DL6 A;  2IWV A;  4AKM A;  2K4T A;  4F4B A;  3T0S A;  3TZG A;  1G90 A;  2Y0L A;  3NJT A;  3PGU A;  1QJP A;  1S5L O;  2PRN A;  4LSH A;  2K0L A;  4BUM X;  4C4V A;  3POU A;  4AYM C;  3AA0 B;  4O4U A;  3AA1 A;  2YNK A;  5B66 O;  5GTH O;  2M06 A;  2QTK A;  2ZFG A;  1PHO A;  2X9K A;  3AAA A;  4FSP A;  4RLB A;  5E79 O;  3SZV A;  4AYD C;  3BS0 A;  1ORM A;  2KZ7 A;  1ZHZ A;  3WI4 A;  4LSF A;  5DL8 A;  5PRN A;  3WI5 A;  1OSM A;  2JQY A;  2WVP A;  2KDY A;  3AA0 A;  4G75 A;  1GFP A;  2OMF A;  4C69 X;  7PRN A;  1P4T A;  5DL5 A;  1HXU A;  2F1V A;  4FT6 A;  2ERV A;  6PRN A;  4JCH A;  4FRX A;  4AKR A;  4AZL A;  3VY9 X;  1MM4 A;  2YPV A;  3BRY A;  3HOL A;  3LK3 B;  5G38 A;  2JMM A;  2MNH A;  4KR8 A;  3AA7 B;  4KR4 A;  4D64 A;  5G39 A;  5GV0 A;  3WU2 O;  1ZHT A;  5H2F O;  4D65 A;  4PJ0 O;  2XE3 A;  1ZHW A;  3KVD D;  2AXT O;  3UPG A;  3BRZ A;  2KXP B;  2KC0 A;  2R4N A;  4K3B A;  4O4X A;  4C00 A;  2R4P A;  4XNK A;  2WJR A;  3POQ A;  4Z3T A;  1MPF A;  3LK3 A;  4K3C A;  2XTR A;  3QRA A;  3A0H O;  4O3W A;  2XTQ A;  5G3A A;  2GE4 A;  5JDP A;  3HW9 A;  2XMX A;  1GFO A;  2LFU A;  2O4V A;  3FYX A;  2R89 A;  2POR A;  3QRC A;  3HOE A;  4O3X B;  2XE2 A;  5AFU L;  2FGQ X;  2MHL A;  3A2S X;  1GFM A;  2XE1 A;  4FRT A;  4FZL A;  2R4L A;  2W80 C;  4GCS A;  4FSO A;  4B61 A;  3VZU X;  5ADX K;  3PRN A;  2F1T A;  2N2L A;  3LK4 2;  3JTY A;  1ZHX A;  2M07 A;  3PQU A;  1OPF A;  1GFQ A;  1Q9F A;  1BH3 A;  3PGS A;  4GCQ A;  1Q9G A;  3HWB A;  1YS5 A;  4LSE A;  4FUV A;  3VE1 A;  3SZD A;  3PF1 A;  4FQE A;  3LK2 B;  3PQS A;  4FES A;  4N75 A;  3PGR A;  4GF4 A;  3LK4 1;  4RL9 A;  3DWN A;  4JFB A;  1T16 A;  4AYE C;  3DA3 A;  4GCP A;  5DL7 A;  5EE2 A;  3T24 A;  4N58 A;  4G76 A;  4UB6 O;  2XG6 A;  4O3Y A;  3AA6 B;  2X27 X;  3AAE B;  4UB8 O;  5D5D A;  3AA7 A;  3SY9 A;  4AYN A;  5IYU A;  1THQ A;  3C5O A;  1QJ9 A;  4FOZ A;  3VY8 X;  4AFK A;  3K19 A;  4N74 A;  1ZHY A;  3DWO X;  2KXP A;  3AA1 B;  2WJQ A;  1GFN A;  4D5U A;  2ZLD A;  2R4O A;  3VZW X;  2Y2X A;  5KAI O;  3AA6 A;  3VZT X;  4E1T A;  4GHB A;  4CTD A;  2KZ7 B;  3G7G A;  3T20 A;  4IL6 O;  2J4U P;  1IZN B;  3DZM A;  4N59 A;  1HXX A;  4FZM A;  5ADX L; 
#chains in the Genus database with same CATH homology
 2FGR A;  1E54 A;  2XE5 A;  2Y7S A;  8PRN A;  2Y0H A;  5AFU K;  2Y0K A;  3VE2 A;  3UU2 A;  4FMS A;  1PRN A;  2LHF A;  3NSG A;  3POR A;  4LSI A;  3RBH A;  1H6S 1;  2ODJ A;  4AKR B;  1IZN A;  2N2M A;  1HXT A;  4O3Z A;  4QQ1 A;  5T5F A;  3UAQ A;  4AFK A;  2W81 C;  3DA4 A;  4FZN A;  2J1N A;  4PUX A;  3EMN X;  4RLC A;  3POX A;  3SYB A;  3LK2 A;  4AYI D;  4RJX A;  4KRA A;  3GP6 A;  5G26 A;  5FVN A;  1MM5 A;  1QJ8 A;  3SYS A;  3O0E A;  4E1S A;  3V8U A;  1BT9 A;  3AAA B;  4XNL A;  4O49 A;  4AUI A;  4RJW A;  4U9C A;  3AAE A;  3SY7 A;  1BXW A;  5DL6 A;  4AKM A;  4F4B A;  2K4T A;  3T0S A;  3TZG A;  1G90 A;  2Y0L A;  1QJP A;  4LSH A;  2PRN A;  4BUM X;  2K0L A;  3POU A;  4AYM C;  3AA0 B;  4O4U A;  3AA1 A;  2YNK A;  2M06 A;  2QTK A;  2ZFG A;  1PHO A;  3AAA A;  4FSP A;  4RLB A;  3SZV A;  4AYD C;  1ORM A;  2KZ7 A;  1ZHZ A;  3WI4 A;  4LSF A;  5DL8 A;  5PRN A;  3WI5 A;  1OSM A;  4G75 A;  2KDY A;  3AA0 A;  1GFP A;  2OMF A;  4C69 X;  7PRN A;  1P4T A;  5DL5 A;  1HXU A;  2F1V A;  4FT6 A;  2ERV A;  6PRN A;  4JCH A;  4FRX A;  4AKR A;  4AZL A;  3VY9 X;  1MM4 A;  2YPV A;  3HOL A;  3LK3 B;  2JMM A;  2MNH A;  4KR8 A;  3AA7 B;  4KR4 A;  4D64 A;  5GV0 A;  1ZHT A;  4D65 A;  2XE3 A;  1ZHW A;  3KVD D;  3UPG A;  4O4X A;  2KXP B;  2KC0 A;  4XNK A;  3POQ A;  4Z3T A;  1MPF A;  3LK3 A;  2XTR A;  3QRA A;  4O3W A;  2XTQ A;  2GE4 A;  5JDP A;  3HW9 A;  2XMX A;  1GFO A;  2LFU A;  2O4V A;  3FYX A;  2POR A;  3QRC A;  3HOE A;  4O3X B;  2XE2 A;  5AFU L;  2FGQ X;  2MHL A;  3A2S X;  1GFM A;  2XE1 A;  4FRT A;  4FZL A;  2W80 C;  4GCS A;  4B61 A;  4FSO A;  5ADX K;  3VZU X;  3PRN A;  2F1T A;  2N2L A;  3LK4 2;  3JTY A;  1ZHX A;  2M07 A;  3PQU A;  1OPF A;  1GFQ A;  1Q9F A;  1BH3 A;  4GCQ A;  1Q9G A;  3HWB A;  1YS5 A;  4LSE A;  4FUV A;  3VE1 A;  3SZD A;  3LK2 B;  3PQS A;  4FES A;  4GF4 A;  3LK4 1;  4RL9 A;  4JFB A;  4AYE C;  3DA3 A;  4GCP A;  5DL7 A;  5EE2 A;  3T24 A;  4N58 A;  4G76 A;  2XG6 A;  4O3Y A;  3AA6 B;  2X27 X;  3AAE B;  5D5D A;  3SY9 A;  3AA7 A;  4AYN A;  5IYU A;  1THQ A;  3C5O A;  1QJ9 A;  4FOZ A;  3VY8 X;  3K19 A;  1ZHY A;  2KXP A;  3AA1 B;  1GFN A;  4D5U A;  2ZLD A;  3VZW X;  2Y2X A;  3AA6 A;  3VZT X;  4E1T A;  4GHB A;  2KZ7 B;  3G7G A;  3T20 A;  2J4U P;  1IZN B;  4N59 A;  1HXX A;  4FZM A;  5ADX L; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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