5EE2A

The crystal structure of the c-terminal beta-barrel of hpua from neisseria gonorrhoeae
Total Genus 27
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
148
structure length
122
Chain Sequence
LSKGKITYQVWGIRVRNGQFVTSSVLSFITANFNSNTLAGKILGNSDYGPDVDIQNATITGPTFSGDATSGGKSGKLEGKFFEVSIGGKITFDGDRSLDTVFGGVSYEKKLDDTSQDTNHLT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Metal transport
molecule keywords Hemoglobin-haptoglobin-utilization protein
publication title Structural analysis of haemoglobin binding by HpuA from the Neisseriaceae family.
pubmed doi rcsb
source organism Neisseria gonorrhoeae (strain atcc 700825 / fa 1090)
total genus 27
structure length 122
sequence length 148
ec nomenclature
pdb deposition date 2015-10-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.160.90 Mainly Beta Beta Barrel Porin Porin 5ee2A00
1YS5A 3VE2A 4U9CA 2W81C 4AYNA 4O3XB 2KC0A 4O4UA 4O49A 3VE1A 4AYID 2YPVA 3PQSA 4Z3TA 2KDYA 3KVDD 2W80C 3PQUA 4O3ZA 4AYMC 4O4XA 4AYEC 2Y7SA 4O3WA 2LFUA 3HOEA 5EE2A 4AYDC 3HOLA 3UAQA 4O3YA 3V8UA 5T5FA 4QQ1A
chains in the Genus database with same CATH superfamily
2MNHA 1Q9GA 4U9CA 4RLBA 2LHFA 2ODJA 2KC0A 4D65A 5G3AA 3A0HO 4FRXA 1MPFA 3WI5A 5ADXK 1ZHWA 3AAEB 4C4VA 3AA1A 4E1SA 3VZWX 2WVPA 5KAFO 2PRNA 3SZDA 2Y2XA 4PJ0O 2KDYA 1OSMA 3EMNX 2M06A 3VZUX 1IZNA 2IWWA 2R4PA 3AA6A 3PRNA 2ZFGA 3PGSA 3DWOX 4FZLA 4PR7A 4AYMC 3PORA 1G90A 3HW9A 4AKRB 3WU2O 1ZHXA 2JMMA 4B61A 3O0EA 4AKMA 2XTQA 2R4NA 2WJQA 4CTDA 4F4BA 1MM4A 3NSGA 4FZNA 1HXXA 4N58A 1BXWA 3VY9X 5GV0A 2PORA 1HXUA 4C69X 3AAAA 3SZVA 2W81C 2WJRA 4AFKA 4UB8O 1ZHTA 4N75A 4AUIA 1S5LO 2QTKA 1GFNA 4LSEA 1OPFA 2F1CX 3GP6A 5DL7A 2ZLDA 2MHLA 4O49A 3VZTX 4AYID 3SYSA 4C00A 3LK2B 2YNKA 5E79O 2R8AA 2IWVA 2Y0LA 3AA0A 2XE2A 1GFPA 3PGRA 2R88A 5DL5A 5AFUL 3POUA 2W80C 3PQUA 1QJPA 4LSIA 2N2LA 4O3ZA 5G38A 2R89A 1QJ8A 4N59A 3LK3A 3PF1A 2Y7SA 4AZLA 2LFUA 4UB6O 5EE2A 4AYDC 1GFQA 3UAQA 2JQYA 4O3YA 1PRNA 3AA7A 3VY8X 2KZ7A 5T5FA 2FGQX 3SY9A 3WI4A 2OMFA 4AKRA 1E54A 4XNKA 1GFOA 1BT9A 1YS5A 3AA1B 2F1VA 4GCPA 4GHBA 2KXPA 4AYNA 3NJTA 4FMSA 2N2MA 2R4OA 6PRNA 1THQA 4FZMA 4GF4A 1Q9FA 3KZIO 4FSOA 1QJ9A 5B5EO 1T16A 3AA6B 4O4UA 2X27X 3DZMA 4BUMX 3VE1A 2J4UP 4RL9A 1GFMA 4C4VB 4K3CA 5PRNA 1ORMA 2YPVA 3PQSA 5FVNA 4FOZA 4Z3TA 4KRAA 4E1TA 1ZHZA 3K19A 3TZGA 3KVDD 4GCQA 4KR8A 4N74A 3DA3A 3BRZA 3DA4A 2ERVA 3AAAB 3AAEA 4O4XA 4FRTA 5IYUA 3JTYA 4FSPA 2GE4A 5GTIO 4AYEC 3HWBA 3PGUA 4GCSA 4LSFA 4QQ1A 2XE3A 2R4LA 2X9KA 2XE5A 3A0BO 2FGRA 3LK42 3A2SX 4JFBA 3SYBA 4FESA 3VE2A 5ADXL 2XTRA 3DWNA 4O3XB 4XNLA 3AA0B 5D5DA 5TISO 3BRYA 3T0SA 2K0LA 4G75A 4FT6A 1MM5A 1BH3A 1H6S1 3UPGA 5G26A 5GTHO 1IZNB 2XG6A 3JCUO 4FQEA 4G76A 4LSHA 1ZHYA 2J1NA 2M07A 3UU2A 4KR4A 5H2FO 3LK3B 3QRCA 2XMXA 3POQA 8PRNA 2AXTO 2Y0HA 1P4TA 3FYXA 2XE1A 4IL6O 4JCHA 4D5UA 5B66O 1HXTA 3AA7B 4RJWA 5DL8A 2KZ7B 1PHOA 4K3BA 4RLCA 7PRNA 5JDPA 1T1LA 3LK2A 5G39A 2K4TA 3T24A 2KXPB 4D64A 3LK41 2F1TA 4O3WA 5KAIO 3HOEA 2O4VA 4RJXA 4FUVA 3HOLA 3RBHA 3BS0A 3POXA 3C5OA 3QRAA 2Y0KA 3V8UA 3T20A 3G7GA 5DL6A 4PUXA 3SY7A 5AFUK
chains in the Genus database with same CATH topology
2MNHA 1Q9GA 4U9CA 4RLBA 2LHFA 2ODJA 2KC0A 4D65A 4FRXA 1MPFA 3WI5A 5ADXK 1ZHWA 3AAEB 3AA1A 4E1SA 3VZWX 3SZDA 2PRNA 2Y2XA 2KDYA 1OSMA 3EMNX 2M06A 3VZUX 1IZNA 3AA6A 3PRNA 2ZFGA 4FZLA 4AYMC 3PORA 1G90A 3HW9A 4AKRB 1ZHXA 2JMMA 4B61A 3O0EA 4AKMA 2XTQA 4F4BA 1MM4A 3NSGA 4FZNA 1HXXA 4N58A 1BXWA 3VY9X 5GV0A 2PORA 1HXUA 4C69X 3AAAA 3SZVA 2W81C 4AFKA 1ZHTA 4AUIA 2QTKA 1GFNA 4LSEA 1OPFA 3GP6A 5DL7A 2ZLDA 2MHLA 4O49A 3VZTX 4AYID 3SYSA 3LK2B 2YNKA 2Y0LA 3AA0A 2XE2A 1GFPA 5DL5A 5AFUL 3POUA 2W80C 3PQUA 1QJPA 4LSIA 2N2LA 4O3ZA 1QJ8A 4N59A 3LK3A 4AZLA 2Y7SA 2LFUA 5EE2A 4AYDC 1GFQA 3UAQA 4O3YA 1PRNA 3AA7A 3VY8X 2KZ7A 5T5FA 2FGQX 3SY9A 3WI4A 2OMFA 4AKRA 1E54A 4XNKA 1GFOA 1BT9A 1YS5A 3AA1B 2F1VA 4GCPA 4GHBA 2KXPA 4AYNA 4FMSA 2N2MA 6PRNA 1THQA 4FZMA 4GF4A 1Q9FA 4FSOA 1QJ9A 3AA6B 4O4UA 2J4UP 2X27X 4BUMX 3VE1A 4RL9A 1GFMA 5PRNA 1ORMA 2YPVA 3PQSA 5FVNA 4FOZA 4Z3TA 4KRAA 4E1TA 1ZHZA 3K19A 3TZGA 3KVDD 4GCQA 4KR8A 3DA3A 3DA4A 5IYUA 2ERVA 3AAAB 3AAEA 4O4XA 4FRTA 3JTYA 4FSPA 2GE4A 4AYEC 3HWBA 4GCSA 4LSFA 4QQ1A 2XE3A 3SYBA 2XE5A 3LK42 2FGRA 4JFBA 3A2SX 3VE2A 5ADXL 4FESA 2XTRA 4O3XB 4XNLA 3AA0B 5D5DA 3T0SA 2K0LA 4G75A 4FT6A 1MM5A 1BH3A 1H6S1 3UPGA 5G26A 1IZNB 2XG6A 4G76A 4LSHA 1ZHYA 2J1NA 2M07A 3UU2A 4KR4A 3LK3B 3QRCA 2XMXA 3POQA 8PRNA 3FYXA 2Y0HA 1P4TA 4JCHA 2XE1A 4D5UA 1HXTA 3AA7B 4RJWA 5DL8A 2KZ7B 1PHOA 4RLCA 7PRNA 5JDPA 3LK2A 2K4TA 3T24A 2KXPB 4D64A 3LK41 2F1TA 4O3WA 3RBHA 3HOEA 2O4VA 4RJXA 4FUVA 3HOLA 3V8UA 3POXA 3C5OA 3QRAA 2Y0KA 3T20A 3G7GA 5DL6A 4PUXA 3SY7A 5AFUK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1YS5 A;  3VE2 A;  4U9C A;  2W81 C;  4AYN A;  4O3X B;  2KC0 A;  4O4U A;  4O49 A;  3VE1 A;  4AYI D;  2YPV A;  3PQS A;  4Z3T A;  2KDY A;  3KVD D;  2W80 C;  3PQU A;  4O3Z A;  4AYM C;  4O4X A;  4AYE C;  2Y7S A;  4O3W A;  2LFU A;  3HOE A;  5EE2 A;  4AYD C;  3HOL A;  3UAQ A;  4O3Y A;  3V8U A;  5T5F A;  4QQ1 A; 
#chains in the Genus database with same CATH topology
 2MNH A;  1Q9G A;  4U9C A;  4RLB A;  2LHF A;  2ODJ A;  2KC0 A;  4D65 A;  5G3A A;  3A0H O;  4FRX A;  1MPF A;  3WI5 A;  5ADX K;  1ZHW A;  3AAE B;  4C4V A;  3AA1 A;  4E1S A;  3VZW X;  2WVP A;  5KAF O;  2PRN A;  3SZD A;  2Y2X A;  4PJ0 O;  2KDY A;  1OSM A;  3EMN X;  2M06 A;  3VZU X;  1IZN A;  2IWW A;  2R4P A;  3AA6 A;  3PRN A;  2ZFG A;  3PGS A;  3DWO X;  4FZL A;  4PR7 A;  4AYM C;  3POR A;  1G90 A;  3HW9 A;  4AKR B;  3WU2 O;  1ZHX A;  2JMM A;  4B61 A;  3O0E A;  4AKM A;  2XTQ A;  2R4N A;  2WJQ A;  4CTD A;  4F4B A;  1MM4 A;  3NSG A;  4FZN A;  1HXX A;  4N58 A;  1BXW A;  3VY9 X;  5GV0 A;  2POR A;  1HXU A;  4C69 X;  3AAA A;  3SZV A;  2W81 C;  2WJR A;  4AFK A;  4UB8 O;  1ZHT A;  4N75 A;  4AUI A;  1S5L O;  2QTK A;  1GFN A;  4LSE A;  1OPF A;  2F1C X;  3GP6 A;  5DL7 A;  2ZLD A;  2MHL A;  4O49 A;  3VZT X;  4AYI D;  3SYS A;  4C00 A;  3LK2 B;  2YNK A;  5E79 O;  2R8A A;  2IWV A;  2Y0L A;  3AA0 A;  2XE2 A;  1GFP A;  3PGR A;  2R88 A;  5DL5 A;  5AFU L;  3POU A;  2W80 C;  3PQU A;  1QJP A;  4LSI A;  2N2L A;  4O3Z A;  5G38 A;  2R89 A;  1QJ8 A;  4N59 A;  3LK3 A;  3PF1 A;  2Y7S A;  4AZL A;  2LFU A;  4UB6 O;  5EE2 A;  4AYD C;  1GFQ A;  3UAQ A;  2JQY A;  4O3Y A;  1PRN A;  3AA7 A;  3VY8 X;  2KZ7 A;  5T5F A;  2FGQ X;  3SY9 A;  3WI4 A;  2OMF A;  4AKR A;  1E54 A;  4XNK A;  1GFO A;  1BT9 A;  1YS5 A;  3AA1 B;  2F1V A;  4GCP A;  4GHB A;  2KXP A;  4AYN A;  3NJT A;  4FMS A;  2N2M A;  2R4O A;  6PRN A;  1THQ A;  4FZM A;  4GF4 A;  1Q9F A;  3KZI O;  4FSO A;  1QJ9 A;  5B5E O;  1T16 A;  3AA6 B;  4O4U A;  2X27 X;  3DZM A;  4BUM X;  3VE1 A;  2J4U P;  4RL9 A;  1GFM A;  4C4V B;  4K3C A;  5PRN A;  1ORM A;  2YPV A;  3PQS A;  5FVN A;  4FOZ A;  4Z3T A;  4KRA A;  4E1T A;  1ZHZ A;  3K19 A;  3TZG A;  3KVD D;  4GCQ A;  4KR8 A;  4N74 A;  3DA3 A;  3BRZ A;  3DA4 A;  2ERV A;  3AAA B;  3AAE A;  4O4X A;  4FRT A;  5IYU A;  3JTY A;  4FSP A;  2GE4 A;  5GTI O;  4AYE C;  3HWB A;  3PGU A;  4GCS A;  4LSF A;  4QQ1 A;  2XE3 A;  2R4L A;  2X9K A;  2XE5 A;  3A0B O;  2FGR A;  3LK4 2;  3A2S X;  4JFB A;  3SYB A;  4FES A;  3VE2 A;  5ADX L;  2XTR A;  3DWN A;  4O3X B;  4XNL A;  3AA0 B;  5D5D A;  5TIS O;  3BRY A;  3T0S A;  2K0L A;  4G75 A;  4FT6 A;  1MM5 A;  1BH3 A;  1H6S 1;  3UPG A;  5G26 A;  5GTH O;  1IZN B;  2XG6 A;  3JCU O;  4FQE A;  4G76 A;  4LSH A;  1ZHY A;  2J1N A;  2M07 A;  3UU2 A;  4KR4 A;  5H2F O;  3LK3 B;  3QRC A;  2XMX A;  3POQ A;  8PRN A;  2AXT O;  2Y0H A;  1P4T A;  3FYX A;  2XE1 A;  4IL6 O;  4JCH A;  4D5U A;  5B66 O;  1HXT A;  3AA7 B;  4RJW A;  5DL8 A;  2KZ7 B;  1PHO A;  4K3B A;  4RLC A;  7PRN A;  5JDP A;  1T1L A;  3LK2 A;  5G39 A;  2K4T A;  3T24 A;  2KXP B;  4D64 A;  3LK4 1;  2F1T A;  4O3W A;  5KAI O;  3HOE A;  2O4V A;  4RJX A;  4FUV A;  3HOL A;  3RBH A;  3BS0 A;  3POX A;  3C5O A;  3QRA A;  2Y0K A;  3V8U A;  3T20 A;  3G7G A;  5DL6 A;  4PUX A;  3SY7 A;  5AFU K; 
#chains in the Genus database with same CATH homology
 2MNH A;  1Q9G A;  4U9C A;  4RLB A;  2LHF A;  2ODJ A;  2KC0 A;  4D65 A;  4FRX A;  1MPF A;  3WI5 A;  5ADX K;  1ZHW A;  3AAE B;  3AA1 A;  4E1S A;  3VZW X;  3SZD A;  2PRN A;  2Y2X A;  2KDY A;  1OSM A;  3EMN X;  2M06 A;  3VZU X;  1IZN A;  3AA6 A;  3PRN A;  2ZFG A;  4FZL A;  4AYM C;  3POR A;  1G90 A;  3HW9 A;  4AKR B;  1ZHX A;  2JMM A;  4B61 A;  3O0E A;  4AKM A;  2XTQ A;  4F4B A;  1MM4 A;  3NSG A;  4FZN A;  1HXX A;  4N58 A;  1BXW A;  3VY9 X;  5GV0 A;  2POR A;  1HXU A;  4C69 X;  3AAA A;  3SZV A;  2W81 C;  4AFK A;  1ZHT A;  4AUI A;  2QTK A;  1GFN A;  4LSE A;  1OPF A;  3GP6 A;  5DL7 A;  2ZLD A;  2MHL A;  4O49 A;  3VZT X;  4AYI D;  3SYS A;  3LK2 B;  2YNK A;  2Y0L A;  3AA0 A;  2XE2 A;  1GFP A;  5DL5 A;  5AFU L;  3POU A;  2W80 C;  3PQU A;  1QJP A;  4LSI A;  2N2L A;  4O3Z A;  1QJ8 A;  4N59 A;  3LK3 A;  4AZL A;  2Y7S A;  2LFU A;  5EE2 A;  4AYD C;  1GFQ A;  3UAQ A;  4O3Y A;  1PRN A;  3AA7 A;  3VY8 X;  2KZ7 A;  5T5F A;  2FGQ X;  3SY9 A;  3WI4 A;  2OMF A;  4AKR A;  1E54 A;  4XNK A;  1GFO A;  1BT9 A;  1YS5 A;  3AA1 B;  2F1V A;  4GCP A;  4GHB A;  2KXP A;  4AYN A;  4FMS A;  2N2M A;  6PRN A;  1THQ A;  4FZM A;  4GF4 A;  1Q9F A;  4FSO A;  1QJ9 A;  3AA6 B;  4O4U A;  2J4U P;  2X27 X;  4BUM X;  3VE1 A;  4RL9 A;  1GFM A;  5PRN A;  1ORM A;  2YPV A;  3PQS A;  5FVN A;  4FOZ A;  4Z3T A;  4KRA A;  4E1T A;  1ZHZ A;  3K19 A;  3TZG A;  3KVD D;  4GCQ A;  4KR8 A;  3DA3 A;  3DA4 A;  5IYU A;  2ERV A;  3AAA B;  3AAE A;  4O4X A;  4FRT A;  3JTY A;  4FSP A;  2GE4 A;  4AYE C;  3HWB A;  4GCS A;  4LSF A;  4QQ1 A;  2XE3 A;  3SYB A;  2XE5 A;  3LK4 2;  2FGR A;  4JFB A;  3A2S X;  3VE2 A;  5ADX L;  4FES A;  2XTR A;  4O3X B;  4XNL A;  3AA0 B;  5D5D A;  3T0S A;  2K0L A;  4G75 A;  4FT6 A;  1MM5 A;  1BH3 A;  1H6S 1;  3UPG A;  5G26 A;  1IZN B;  2XG6 A;  4G76 A;  4LSH A;  1ZHY A;  2J1N A;  2M07 A;  3UU2 A;  4KR4 A;  3LK3 B;  3QRC A;  2XMX A;  3POQ A;  8PRN A;  3FYX A;  2Y0H A;  1P4T A;  4JCH A;  2XE1 A;  4D5U A;  1HXT A;  3AA7 B;  4RJW A;  5DL8 A;  2KZ7 B;  1PHO A;  4RLC A;  7PRN A;  5JDP A;  3LK2 A;  2K4T A;  3T24 A;  2KXP B;  4D64 A;  3LK4 1;  2F1T A;  4O3W A;  3RBH A;  3HOE A;  2O4V A;  4RJX A;  4FUV A;  3HOL A;  3V8U A;  3POX A;  3C5O A;  3QRA A;  2Y0K A;  3T20 A;  3G7G A;  5DL6 A;  4PUX A;  3SY7 A;  5AFU K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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