5EE2A

The crystal structure of the c-terminal beta-barrel of hpua from neisseria gonorrhoeae
Total Genus 27
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
148
structure length
122
Chain Sequence
b'LSKGKITYQVWGIRVRNGQFVTSSVLSFITANFNSNTLAGKILGNSDYGPDVDIQNATITGPTFSGDATSGGKSGKLEGKFFEVSIGGKITFDGDRSLDTVFGGVSYEKKLDDTSQDTNHLT'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Structural analysis of haemoglobin binding by HpuA from the Neisseriaceae family.
pubmed doi rcsb
molecule keywords Hemoglobin-haptoglobin-utilization protein
source organism Neisseria gonorrhoeae (strain atcc 700825 / fa 1090)
molecule tags Metal transport
total genus 27
structure length 122
sequence length 148
ec nomenclature
pdb deposition date 2015-10-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.160.90 Mainly Beta Beta Barrel Porin Porin 5ee2A00
4Z3TA 2W80C 4O3XB 4O4UA 4O3YA 3VE1A 1YS5A 3PQSA 2KC0A 4AYNA 2KDYA 3HOEA 4AYID 4AYEC 3PQUA 4U9CA 3KVDD 3VE2A 4O4XA 5EE2A 4QQ1A 5T5FA 3UAQA 2Y7SA 4O3WA 4AYMC 2W81C 2LFUA 4O49A 3HOLA 3V8UA 4AYDC 4O3ZA 2YPVA
chains in the Genus database with same CATH superfamily
1OPFA 5B5EO 3UU2A 4Z3TA 4O3XB 2XE5A 3TZGA 8PRNA 3AA7A 3PQSA 2XTQA 5ADXK 1BT9A 1MPFA 2JQYA 7PRNA 1ZHTA 3HOEA 1GFNA 1IZNA 2IWVA 4FQEA 4N58A 3A2SX 1QJ8A 2X9KA 2FGRA 2J1NA 3AAEB 4FMSA 4AKRA 2MNHA 4AYEC 2Y0KA 4U9CA 4PJ0O 1H6S1 3NJTA 1GFOA 3KZIO 2R4LA 3PGRA 3AAAB 2KXPA 2R88A 1MM5A 4FRTA 5EE2A 3JCUO 3LK2A 2K0LA 4XNLA 1HXUA 4D65A 3AA1B 4AYDC 4RL9A 2Y0HA 2YPVA 3PF1A 5G26A 4G76A 3QRCA 2QTKA 3VY8X 4C4VB 4FRXA 2ZLDA 2X27X 2N2MA 4O3YA 4AZLA 5B66O 2F1CX 3GP6A 3PGSA 4UB8O 2XE1A 3A0BO 3POUA 4D5UA 2KDYA 2XMXA 4K3CA 1ORMA 3VZUX 3K19A 2YNKA 3AAEA 2XTRA 5DL5A 3WI5A 4N75A 4RJWA 4AKMA 3VY9X 1P4TA 2PRNA 3AAAA 2Y2XA 3DWOX 1Q9GA 5GTHO 4LSIA 5D5DA 3VE2A 2LHFA 4FOZA 4N59A 4FT6A 2F1TA 5G3AA 5GV0A 3UPGA 5T5FA 4RJXA 3UAQA 4K3BA 4FZMA 2Y7SA 4UB6O 3AA1A 3A0HO 3POQA 3QRAA 2PORA 2F1VA 4B61A 2Y0LA 2WJRA 4FESA 2LFUA 4AYMC 2ODJA 3C5OA 3AA0B 4PR7A 6PRNA 4LSHA 3V8UA 4E1TA 2WVPA 3SY7A 2XE3A 1GFQA 4O3ZA 2O4VA 3AA6B 4RLCA 5DL7A 1GFPA 2KZ7B 1QJ9A 4GCPA 3PGUA 2R8AA 4GF4A 4O4UA 3BRYA 5FVNA 3RBHA 4AUIA 5H2FO 1THQA 3VE1A 1YS5A 4GCQA 4F4BA 1HXTA 4GCSA 5GTIO 3DA3A 1HXXA 3LK3B 5KAIO 1QJPA 5DL8A 2JMMA 5KAFO 3SZDA 3BRZA 1ZHXA 3FYXA 4PUXA 4FSPA 5IYUA 3PQUA 4KR8A 4IL6O 3KVDD 4O4XA 4N74A 4BUMX 4FSOA 5G39A 3EMNX 3POXA 2ZFGA 3LK41 4QQ1A 4D64A 5ADXL 3AA0A 3DZMA 2KXPB 4O3WA 2XE2A 3DA4A 3JTYA 3WI4A 2K4TA 2W81C 1MM4A 3BS0A 2KZ7A 3LK2B 4KR4A 5PRNA 3VZTX 5AFUL 3HOLA 2R4PA 4C69X 1BXWA 4C00A 4C4VA 4XNKA 3SY9A 1PRNA 2M07A 4GHBA 3T0SA 4CTDA 2W80C 3SYBA 3HWBA 4LSFA 5E79O 1T16A 3PRNA 3HW9A 4FZNA 5TISO 1G90A 2ERVA 3LK42 2KC0A 3LK3A 2R89A 1ZHWA 5JDPA 1GFMA 3VZWX 2OMFA 4AYNA 5AFUK 5DL6A 3AA7B 2IWWA 2AXTO 4AYID 1BH3A 1PHOA 1ZHYA 2MHLA 4RLBA 5G38A 2R4OA 1T1LA 3O0EA 3DWNA 4FUVA 2R4NA 1OSMA 1ZHZA 3SYSA 3WU2O 1Q9FA 1IZNB 3T24A 4AFKA 4E1SA 4LSEA 3PORA 2N2LA 4KRAA 4AKRB 3T20A 1E54A 4JFBA 3NSGA 4JCHA 3G7GA 2GE4A 2FGQX 2M06A 2WJQA 2XG6A 1S5LO 4O49A 4FZLA 4G75A 3AA6A 3SZVA 2J4UP
chains in the Genus database with same CATH topology
1OPFA 3UU2A 4Z3TA 4O3XB 2XE5A 3TZGA 8PRNA 3AA7A 3PQSA 2XTQA 5ADXK 1BT9A 1MPFA 7PRNA 1ZHTA 3HOEA 1GFNA 1IZNA 4N58A 3A2SX 1QJ8A 3AAEB 2FGRA 2J1NA 4FMSA 4AKRA 4AYEC 2MNHA 2Y0KA 4U9CA 1H6S1 1GFOA 3AAAB 2KXPA 5EE2A 1MM5A 4FRTA 3LK2A 2K0LA 4XNLA 1HXUA 4D65A 3AA1B 4AYDC 4RL9A 2Y0HA 2YPVA 5G26A 4G76A 3QRCA 2QTKA 3VY8X 4FRXA 2ZLDA 2X27X 2N2MA 4O3YA 4AZLA 3GP6A 2XE1A 3POUA 4D5UA 2KDYA 2XMXA 1ORMA 3VZUX 3K19A 2YNKA 3AAEA 2XTRA 5DL5A 3WI5A 4AKMA 4RJWA 3VY9X 1P4TA 2PRNA 3AAAA 2Y2XA 1Q9GA 4LSIA 5D5DA 3VE2A 2LHFA 4FOZA 4N59A 4FT6A 2F1TA 5GV0A 3UPGA 5T5FA 4RJXA 3UAQA 4FZMA 2Y7SA 3AA1A 3POQA 3QRAA 2PORA 2F1VA 4B61A 2Y0LA 4AYMC 4FESA 2LFUA 2ODJA 3C5OA 3AA0B 6PRNA 4LSHA 3V8UA 4E1TA 3SY7A 2XE3A 1GFQA 4O3ZA 2O4VA 3AA6B 4RLCA 5DL7A 1GFPA 2KZ7B 1QJ9A 4GCPA 4GF4A 5FVNA 4O4UA 3RBHA 4AUIA 1THQA 3VE1A 1YS5A 4GCQA 4F4BA 1HXTA 4GCSA 3DA3A 1HXXA 3LK3B 1QJPA 5DL8A 2JMMA 3SZDA 1ZHXA 3FYXA 4PUXA 4FSPA 5IYUA 3PQUA 4KR8A 3KVDD 4O4XA 4BUMX 4FSOA 3EMNX 3POXA 2ZFGA 3LK41 4QQ1A 4D64A 5ADXL 3AA0A 2KXPB 4O3WA 2XE2A 3DA4A 3JTYA 2K4TA 2W81C 1MM4A 3LK2B 2KZ7A 4KR4A 5PRNA 3VZTX 5AFUL 3HOLA 4C69X 1BXWA 4XNKA 3SY9A 1PRNA 2M07A 4GHBA 3T0SA 2W80C 3SYBA 3HWBA 4LSFA 4FZNA 3PRNA 3HW9A 1G90A 2ERVA 3LK42 2KC0A 3LK3A 1ZHWA 5JDPA 1GFMA 3VZWX 2OMFA 4AYNA 5AFUK 5DL6A 3AA7B 4AYID 1BH3A 1PHOA 1ZHYA 2MHLA 4RLBA 3WI4A 3O0EA 4FUVA 3SYSA 1OSMA 1ZHZA 1Q9FA 1IZNB 3T24A 4AFKA 4E1SA 4LSEA 3PORA 2N2LA 4KRAA 4AKRB 3T20A 1E54A 4JFBA 3NSGA 4JCHA 3G7GA 2GE4A 2FGQX 2M06A 2XG6A 4O49A 4FZLA 4G75A 3AA6A 3SZVA 2J4UP
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4Z3T A;  2W80 C;  4O3X B;  4O4U A;  4O3Y A;  3VE1 A;  1YS5 A;  3PQS A;  2KC0 A;  4AYN A;  2KDY A;  3HOE A;  4AYI D;  4AYE C;  3PQU A;  4U9C A;  3KVD D;  3VE2 A;  4O4X A;  5EE2 A;  4QQ1 A;  5T5F A;  3UAQ A;  2Y7S A;  4O3W A;  4AYM C;  2W81 C;  2LFU A;  4O49 A;  3HOL A;  3V8U A;  4AYD C;  4O3Z A;  2YPV A; 
#chains in the Genus database with same CATH topology
 1OPF A;  5B5E O;  3UU2 A;  4Z3T A;  4O3X B;  2XE5 A;  3TZG A;  8PRN A;  3AA7 A;  3PQS A;  2XTQ A;  5ADX K;  1BT9 A;  1MPF A;  2JQY A;  7PRN A;  1ZHT A;  3HOE A;  1GFN A;  1IZN A;  2IWV A;  4FQE A;  4N58 A;  3A2S X;  1QJ8 A;  2X9K A;  2FGR A;  2J1N A;  3AAE B;  4FMS A;  4AKR A;  2MNH A;  4AYE C;  2Y0K A;  4U9C A;  4PJ0 O;  1H6S 1;  3NJT A;  1GFO A;  3KZI O;  2R4L A;  3PGR A;  3AAA B;  2KXP A;  2R88 A;  1MM5 A;  4FRT A;  5EE2 A;  3JCU O;  3LK2 A;  2K0L A;  4XNL A;  1HXU A;  4D65 A;  3AA1 B;  4AYD C;  4RL9 A;  2Y0H A;  2YPV A;  3PF1 A;  5G26 A;  4G76 A;  3QRC A;  2QTK A;  3VY8 X;  4C4V B;  4FRX A;  2ZLD A;  2X27 X;  2N2M A;  4O3Y A;  4AZL A;  5B66 O;  2F1C X;  3GP6 A;  3PGS A;  4UB8 O;  2XE1 A;  3A0B O;  3POU A;  4D5U A;  2KDY A;  2XMX A;  4K3C A;  1ORM A;  3VZU X;  3K19 A;  2YNK A;  3AAE A;  2XTR A;  5DL5 A;  3WI5 A;  4N75 A;  4RJW A;  4AKM A;  3VY9 X;  1P4T A;  2PRN A;  3AAA A;  2Y2X A;  3DWO X;  1Q9G A;  5GTH O;  4LSI A;  5D5D A;  3VE2 A;  2LHF A;  4FOZ A;  4N59 A;  4FT6 A;  2F1T A;  5G3A A;  5GV0 A;  3UPG A;  5T5F A;  4RJX A;  3UAQ A;  4K3B A;  4FZM A;  2Y7S A;  4UB6 O;  3AA1 A;  3A0H O;  3POQ A;  3QRA A;  2POR A;  2F1V A;  4B61 A;  2Y0L A;  2WJR A;  4FES A;  2LFU A;  4AYM C;  2ODJ A;  3C5O A;  3AA0 B;  4PR7 A;  6PRN A;  4LSH A;  3V8U A;  4E1T A;  2WVP A;  3SY7 A;  2XE3 A;  1GFQ A;  4O3Z A;  2O4V A;  3AA6 B;  4RLC A;  5DL7 A;  1GFP A;  2KZ7 B;  1QJ9 A;  4GCP A;  3PGU A;  2R8A A;  4GF4 A;  4O4U A;  3BRY A;  5FVN A;  3RBH A;  4AUI A;  5H2F O;  1THQ A;  3VE1 A;  1YS5 A;  4GCQ A;  4F4B A;  1HXT A;  4GCS A;  5GTI O;  3DA3 A;  1HXX A;  3LK3 B;  5KAI O;  1QJP A;  5DL8 A;  2JMM A;  5KAF O;  3SZD A;  3BRZ A;  1ZHX A;  3FYX A;  4PUX A;  4FSP A;  5IYU A;  3PQU A;  4KR8 A;  4IL6 O;  3KVD D;  4O4X A;  4N74 A;  4BUM X;  4FSO A;  5G39 A;  3EMN X;  3POX A;  2ZFG A;  3LK4 1;  4QQ1 A;  4D64 A;  5ADX L;  3AA0 A;  3DZM A;  2KXP B;  4O3W A;  2XE2 A;  3DA4 A;  3JTY A;  3WI4 A;  2K4T A;  2W81 C;  1MM4 A;  3BS0 A;  2KZ7 A;  3LK2 B;  4KR4 A;  5PRN A;  3VZT X;  5AFU L;  3HOL A;  2R4P A;  4C69 X;  1BXW A;  4C00 A;  4C4V A;  4XNK A;  3SY9 A;  1PRN A;  2M07 A;  4GHB A;  3T0S A;  4CTD A;  2W80 C;  3SYB A;  3HWB A;  4LSF A;  5E79 O;  1T16 A;  3PRN A;  3HW9 A;  4FZN A;  5TIS O;  1G90 A;  2ERV A;  3LK4 2;  2KC0 A;  3LK3 A;  2R89 A;  1ZHW A;  5JDP A;  1GFM A;  3VZW X;  2OMF A;  4AYN A;  5AFU K;  5DL6 A;  3AA7 B;  2IWW A;  2AXT O;  4AYI D;  1BH3 A;  1PHO A;  1ZHY A;  2MHL A;  4RLB A;  5G38 A;  2R4O A;  1T1L A;  3O0E A;  3DWN A;  4FUV A;  2R4N A;  1OSM A;  1ZHZ A;  3SYS A;  3WU2 O;  1Q9F A;  1IZN B;  3T24 A;  4AFK A;  4E1S A;  4LSE A;  3POR A;  2N2L A;  4KRA A;  4AKR B;  3T20 A;  1E54 A;  4JFB A;  3NSG A;  4JCH A;  3G7G A;  2GE4 A;  2FGQ X;  2M06 A;  2WJQ A;  2XG6 A;  1S5L O;  4O49 A;  4FZL A;  4G75 A;  3AA6 A;  3SZV A;  2J4U P; 
#chains in the Genus database with same CATH homology
 1OPF A;  3UU2 A;  4Z3T A;  4O3X B;  2XE5 A;  3TZG A;  8PRN A;  3AA7 A;  3PQS A;  2XTQ A;  5ADX K;  1BT9 A;  1MPF A;  7PRN A;  1ZHT A;  3HOE A;  1GFN A;  1IZN A;  4N58 A;  3A2S X;  1QJ8 A;  3AAE B;  2FGR A;  2J1N A;  4FMS A;  4AKR A;  4AYE C;  2MNH A;  2Y0K A;  4U9C A;  1H6S 1;  1GFO A;  3AAA B;  2KXP A;  5EE2 A;  1MM5 A;  4FRT A;  3LK2 A;  2K0L A;  4XNL A;  1HXU A;  4D65 A;  3AA1 B;  4AYD C;  4RL9 A;  2Y0H A;  2YPV A;  5G26 A;  4G76 A;  3QRC A;  2QTK A;  3VY8 X;  4FRX A;  2ZLD A;  2X27 X;  2N2M A;  4O3Y A;  4AZL A;  3GP6 A;  2XE1 A;  3POU A;  4D5U A;  2KDY A;  2XMX A;  1ORM A;  3VZU X;  3K19 A;  2YNK A;  3AAE A;  2XTR A;  5DL5 A;  3WI5 A;  4AKM A;  4RJW A;  3VY9 X;  1P4T A;  2PRN A;  3AAA A;  2Y2X A;  1Q9G A;  4LSI A;  5D5D A;  3VE2 A;  2LHF A;  4FOZ A;  4N59 A;  4FT6 A;  2F1T A;  5GV0 A;  3UPG A;  5T5F A;  4RJX A;  3UAQ A;  4FZM A;  2Y7S A;  3AA1 A;  3POQ A;  3QRA A;  2POR A;  2F1V A;  4B61 A;  2Y0L A;  4AYM C;  4FES A;  2LFU A;  2ODJ A;  3C5O A;  3AA0 B;  6PRN A;  4LSH A;  3V8U A;  4E1T A;  3SY7 A;  2XE3 A;  1GFQ A;  4O3Z A;  2O4V A;  3AA6 B;  4RLC A;  5DL7 A;  1GFP A;  2KZ7 B;  1QJ9 A;  4GCP A;  4GF4 A;  5FVN A;  4O4U A;  3RBH A;  4AUI A;  1THQ A;  3VE1 A;  1YS5 A;  4GCQ A;  4F4B A;  1HXT A;  4GCS A;  3DA3 A;  1HXX A;  3LK3 B;  1QJP A;  5DL8 A;  2JMM A;  3SZD A;  1ZHX A;  3FYX A;  4PUX A;  4FSP A;  5IYU A;  3PQU A;  4KR8 A;  3KVD D;  4O4X A;  4BUM X;  4FSO A;  3EMN X;  3POX A;  2ZFG A;  3LK4 1;  4QQ1 A;  4D64 A;  5ADX L;  3AA0 A;  2KXP B;  4O3W A;  2XE2 A;  3DA4 A;  3JTY A;  2K4T A;  2W81 C;  1MM4 A;  3LK2 B;  2KZ7 A;  4KR4 A;  5PRN A;  3VZT X;  5AFU L;  3HOL A;  4C69 X;  1BXW A;  4XNK A;  3SY9 A;  1PRN A;  2M07 A;  4GHB A;  3T0S A;  2W80 C;  3SYB A;  3HWB A;  4LSF A;  4FZN A;  3PRN A;  3HW9 A;  1G90 A;  2ERV A;  3LK4 2;  2KC0 A;  3LK3 A;  1ZHW A;  5JDP A;  1GFM A;  3VZW X;  2OMF A;  4AYN A;  5AFU K;  5DL6 A;  3AA7 B;  4AYI D;  1BH3 A;  1PHO A;  1ZHY A;  2MHL A;  4RLB A;  3WI4 A;  3O0E A;  4FUV A;  3SYS A;  1OSM A;  1ZHZ A;  1Q9F A;  1IZN B;  3T24 A;  4AFK A;  4E1S A;  4LSE A;  3POR A;  2N2L A;  4KRA A;  4AKR B;  3T20 A;  1E54 A;  4JFB A;  3NSG A;  4JCH A;  3G7G A;  2GE4 A;  2FGQ X;  2M06 A;  2XG6 A;  4O49 A;  4FZL A;  4G75 A;  3AA6 A;  3SZV A;  2J4U P; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...