5EE2A

The crystal structure of the c-terminal beta-barrel of hpua from neisseria gonorrhoeae
Total Genus 27
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
148
structure length
122
Chain Sequence
LSKGKITYQVWGIRVRNGQFVTSSVLSFITANFNSNTLAGKILGNSDYGPDVDIQNATITGPTFSGDATSGGKSGKLEGKFFEVSIGGKITFDGDRSLDTVFGGVSYEKKLDDTSQDTNHLT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Metal transport
source organism Neisseria gonorrhoeae (strain atcc 700825 / fa 1090)
publication title Structural analysis of haemoglobin binding by HpuA from the Neisseriaceae family.
pubmed doi rcsb
molecule keywords Hemoglobin-haptoglobin-utilization protein
total genus 27
structure length 122
sequence length 148
ec nomenclature
pdb deposition date 2015-10-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.160.90 Mainly Beta Beta Barrel Porin Porin 5ee2A00
3V8UA 2Y7SA 4AYMC 2W81C 4O49A 4O3WA 3UAQA 4AYNA 4O4UA 1YS5A 3HOEA 2LFUA 4AYID 4Z3TA 2KDYA 2W80C 5T5FA 2KC0A 3VE2A 5EE2A 3PQSA 4AYEC 4QQ1A 3KVDD 4AYDC 4O4XA 4O3YA 4U9CA 4O3ZA 3HOLA 4O3XB 3PQUA 3VE1A 2YPVA
chains in the Genus database with same CATH superfamily
5AFUK 3V8UA 1ZHTA 2FGRA 2KXPA 4FRTA 1Q9GA 2XE5A 2M07A 2GE4A 4FESA 3GP6A 3NSGA 4AYNA 1ZHXA 2JMMA 4O4UA 3SYBA 3WI4A 3PF1A 3PGRA 4C69X 4XNKA 2XE1A 1BH3A 1PHOA 3AA0B 2J4UP 8PRNA 1ORMA 1OSMA 2F1TA 1Q9FA 3TZGA 3WI5A 4N74A 4KR8A 5G3AA 3WU2O 3LK3A 4PJ0O 5EE2A 3PQSA 4GCQA 4UB8O 1IZNB 4G75A 4FSOA 4RL9A 4K3CA 5ADXL 3KVDD 2KZ7A 3POQA 4JFBA 2K0LA 2WVPA 4PR7A 4U9CA 5G26A 3PGSA 5B66O 3HOLA 3AA6B 1HXTA 1OPFA 4RLCA 4F4BA 3AA7A 3QRAA 4LSHA 3VE1A 1T1LA 2JQYA 4GCSA 3SY7A 1HXXA 2X27X 4FQEA 2N2MA 4KR4A 2W81C 3AAAA 4G76A 2ZFGA 3DZMA 3NJTA 3SYSA 4C4VB 4FZNA 3UAQA 5TISO 2KXPB 3BS0A 5IYUA 5H2FO 4RJXA 3HOEA 4IL6O 1MPFA 1P4TA 3G7GA 3PGUA 5KAIO 3VZTX 1T16A 2MHLA 2R89A 4LSFA 3BRYA 2KDYA 1BXWA 1ZHWA 2M06A 2Y0KA 4AUIA 5G39A 2KC0A 2R4NA 1PRNA 2K4TA 5AFUL 3PRNA 3LK41 3RBHA 4D64A 2XE2A 4XNLA 5B5EO 3AAEA 2WJRA 4B61A 4O4XA 3LK2A 5FVNA 5DL5A 3LK3B 4FT6A 3AAEB 4FZLA 1THQA 4AKRA 4UB6O 3VY9X 4FMSA 3FYXA 4KRAA 4O3XB 2N2LA 3K19A 3POUA 3PQUA 4AZLA 2R4OA 2KZ7B 5GTHO 2YPVA 3POXA 3DA3A 2Y7SA 5GTIO 3VY8X 4AYMC 3HW9A 5ADXK 4FRXA 2R88A 1GFQA 5DL8A 3AA7B 2Y0HA 4N58A 2O4VA 3A0BO 4O3WA 1GFNA 4FUVA 4C00A 4GF4A 2OMFA 3AAAB 5JDPA 4N75A 3JTYA 2LFUA 2MNHA 3HWBA 1H6S1 2R4PA 4D65A 2IWWA 1QJ9A 3AA1A 4CTDA 2LHFA 4FOZA 4GHBA 1MM4A 1ZHZA 3QRCA 2J1NA 2ODJA 2WJQA 5D5DA 1E54A 1MM5A 3VE2A 4AFKA 4AYEC 3EMNX 1BT9A 3DWNA 4FSPA 3C5OA 4LSEA 3DA4A 4AYDC 3PORA 3VZUX 2FGQX 3KZIO 2IWVA 2X9KA 1QJ8A 1S5LO 4K3BA 4RLBA 2PRNA 4O3ZA 3UPGA 3LK2B 2PORA 5DL6A 3A0HO 3BRZA 3T24A 4AKRB 4AKMA 3LK42 4JCHA 2ZLDA 2AXTO 3UU2A 3AA0A 2R4LA 1GFOA 1GFPA 3JCUO 4O49A 1G90A 1GFMA 4FZMA 2R8AA 5PRNA 5GV0A 1YS5A 2QTKA 4PUXA 5DL7A 2Y2XA 6PRNA 1IZNA 2F1CX 4AYID 3T20A 4Z3TA 2XMXA 4LSIA 2XTQA 5E79O 2W80C 5T5FA 3O0EA 1ZHYA 3SY9A 2XTRA 3A2SX 3AA1B 5G38A 3DWOX 3SZVA 4QQ1A 4RJWA 3AA6A 3T0SA 2XG6A 4O3YA 2XE3A 7PRNA 4GCPA 1HXUA 2F1VA 4N59A 2YNKA 2Y0LA 2ERVA 3SZDA 4BUMX 3VZWX 1QJPA 4E1TA 4E1SA 4C4VA 4D5UA 5KAFO
chains in the Genus database with same CATH topology
5AFUK 3V8UA 1ZHTA 2FGRA 2KXPA 4FRTA 1Q9GA 2XE5A 2M07A 2GE4A 4FESA 3GP6A 3NSGA 4AYNA 1ZHXA 2JMMA 4O4UA 3SYBA 3WI4A 4C69X 4XNKA 2XE1A 1BH3A 1PHOA 3AA0B 2J4UP 8PRNA 1ORMA 1OSMA 2F1TA 1Q9FA 3TZGA 3WI5A 4KR8A 3LK3A 5EE2A 3PQSA 4GCQA 1IZNB 4G75A 4FSOA 4RL9A 5ADXL 3KVDD 2KZ7A 3POQA 4JFBA 2K0LA 4U9CA 5G26A 3HOLA 3AA6B 1HXTA 1OPFA 4RLCA 4F4BA 3AA7A 3QRAA 4LSHA 3VE1A 4GCSA 3SY7A 1HXXA 2X27X 2N2MA 4KR4A 2W81C 3AAAA 4G76A 2ZFGA 3SYSA 4FZNA 3UAQA 2KXPB 5IYUA 4RJXA 3HOEA 1MPFA 1P4TA 3G7GA 3VZTX 2MHLA 4LSFA 2KDYA 1BXWA 1ZHWA 2M06A 2Y0KA 4AUIA 2KC0A 5AFUL 1PRNA 2K4TA 3PRNA 3LK41 3RBHA 4D64A 2XE2A 4XNLA 3AAEA 4B61A 4O4XA 3LK2A 5FVNA 5DL5A 3LK3B 4FT6A 3AAEB 4FZLA 1THQA 4AKRA 3VY9X 4FMSA 3FYXA 4KRAA 4O3XB 2N2LA 3K19A 3POUA 3PQUA 4AZLA 2KZ7B 2YPVA 3POXA 3DA3A 2Y7SA 3VY8X 4AYMC 3HW9A 5ADXK 4FRXA 1GFQA 5DL8A 3AA7B 2Y0HA 4N58A 2O4VA 4O3WA 1GFNA 4FUVA 4GF4A 2OMFA 3AAAB 5JDPA 3JTYA 2LFUA 2MNHA 3HWBA 1H6S1 4D65A 1QJ9A 3AA1A 2LHFA 4FOZA 4GHBA 1MM4A 1ZHZA 3QRCA 2J1NA 2ODJA 5D5DA 3VE2A 1E54A 1MM5A 4AFKA 4AYEC 3EMNX 1BT9A 4FSPA 4LSEA 3C5OA 3DA4A 4AYDC 3PORA 3VZUX 2FGQX 4RLBA 1QJ8A 2PRNA 4O3ZA 3UPGA 3LK2B 2PORA 5DL6A 3T24A 4AKRB 4AKMA 3LK42 4JCHA 2ZLDA 3UU2A 3AA0A 1GFOA 1GFPA 1G90A 4O49A 1GFMA 4FZMA 5PRNA 5GV0A 1YS5A 2QTKA 4PUXA 5DL7A 2Y2XA 6PRNA 1IZNA 4AYID 3T20A 4Z3TA 2XMXA 4LSIA 2XTQA 2W80C 5T5FA 3O0EA 1ZHYA 3SY9A 2XTRA 3A2SX 3AA1B 3SZVA 4QQ1A 4RJWA 3AA6A 3T0SA 2XG6A 4O3YA 2XE3A 7PRNA 4GCPA 1HXUA 2F1VA 4N59A 2YNKA 2Y0LA 2ERVA 3SZDA 4BUMX 3VZWX 1QJPA 4E1TA 4E1SA 4D5UA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3V8U A;  2Y7S A;  4AYM C;  2W81 C;  4O49 A;  4O3W A;  3UAQ A;  4AYN A;  4O4U A;  1YS5 A;  3HOE A;  2LFU A;  4AYI D;  4Z3T A;  2KDY A;  2W80 C;  5T5F A;  2KC0 A;  3VE2 A;  5EE2 A;  3PQS A;  4AYE C;  4QQ1 A;  3KVD D;  4AYD C;  4O4X A;  4O3Y A;  4U9C A;  4O3Z A;  3HOL A;  4O3X B;  3PQU A;  3VE1 A;  2YPV A; 
#chains in the Genus database with same CATH topology
 5AFU K;  3V8U A;  1ZHT A;  2FGR A;  2KXP A;  4FRT A;  1Q9G A;  2XE5 A;  2M07 A;  2GE4 A;  4FES A;  3GP6 A;  3NSG A;  4AYN A;  1ZHX A;  2JMM A;  4O4U A;  3SYB A;  3WI4 A;  3PF1 A;  3PGR A;  4C69 X;  4XNK A;  2XE1 A;  1BH3 A;  1PHO A;  3AA0 B;  2J4U P;  8PRN A;  1ORM A;  1OSM A;  2F1T A;  1Q9F A;  3TZG A;  3WI5 A;  4N74 A;  4KR8 A;  5G3A A;  3WU2 O;  3LK3 A;  4PJ0 O;  5EE2 A;  3PQS A;  4GCQ A;  4UB8 O;  1IZN B;  4G75 A;  4FSO A;  4RL9 A;  4K3C A;  5ADX L;  3KVD D;  2KZ7 A;  3POQ A;  4JFB A;  2K0L A;  2WVP A;  4PR7 A;  4U9C A;  5G26 A;  3PGS A;  5B66 O;  3HOL A;  3AA6 B;  1HXT A;  1OPF A;  4RLC A;  4F4B A;  3AA7 A;  3QRA A;  4LSH A;  3VE1 A;  1T1L A;  2JQY A;  4GCS A;  3SY7 A;  1HXX A;  2X27 X;  4FQE A;  2N2M A;  4KR4 A;  2W81 C;  3AAA A;  4G76 A;  2ZFG A;  3DZM A;  3NJT A;  3SYS A;  4C4V B;  4FZN A;  3UAQ A;  5TIS O;  2KXP B;  3BS0 A;  5IYU A;  5H2F O;  4RJX A;  3HOE A;  4IL6 O;  1MPF A;  1P4T A;  3G7G A;  3PGU A;  5KAI O;  3VZT X;  1T16 A;  2MHL A;  2R89 A;  4LSF A;  3BRY A;  2KDY A;  1BXW A;  1ZHW A;  2M06 A;  2Y0K A;  4AUI A;  5G39 A;  2KC0 A;  2R4N A;  1PRN A;  2K4T A;  5AFU L;  3PRN A;  3LK4 1;  3RBH A;  4D64 A;  2XE2 A;  4XNL A;  5B5E O;  3AAE A;  2WJR A;  4B61 A;  4O4X A;  3LK2 A;  5FVN A;  5DL5 A;  3LK3 B;  4FT6 A;  3AAE B;  4FZL A;  1THQ A;  4AKR A;  4UB6 O;  3VY9 X;  4FMS A;  3FYX A;  4KRA A;  4O3X B;  2N2L A;  3K19 A;  3POU A;  3PQU A;  4AZL A;  2R4O A;  2KZ7 B;  5GTH O;  2YPV A;  3POX A;  3DA3 A;  2Y7S A;  5GTI O;  3VY8 X;  4AYM C;  3HW9 A;  5ADX K;  4FRX A;  2R88 A;  1GFQ A;  5DL8 A;  3AA7 B;  2Y0H A;  4N58 A;  2O4V A;  3A0B O;  4O3W A;  1GFN A;  4FUV A;  4C00 A;  4GF4 A;  2OMF A;  3AAA B;  5JDP A;  4N75 A;  3JTY A;  2LFU A;  2MNH A;  3HWB A;  1H6S 1;  2R4P A;  4D65 A;  2IWW A;  1QJ9 A;  3AA1 A;  4CTD A;  2LHF A;  4FOZ A;  4GHB A;  1MM4 A;  1ZHZ A;  3QRC A;  2J1N A;  2ODJ A;  2WJQ A;  5D5D A;  1E54 A;  1MM5 A;  3VE2 A;  4AFK A;  4AYE C;  3EMN X;  1BT9 A;  3DWN A;  4FSP A;  3C5O A;  4LSE A;  3DA4 A;  4AYD C;  3POR A;  3VZU X;  2FGQ X;  3KZI O;  2IWV A;  2X9K A;  1QJ8 A;  1S5L O;  4K3B A;  4RLB A;  2PRN A;  4O3Z A;  3UPG A;  3LK2 B;  2POR A;  5DL6 A;  3A0H O;  3BRZ A;  3T24 A;  4AKR B;  4AKM A;  3LK4 2;  4JCH A;  2ZLD A;  2AXT O;  3UU2 A;  3AA0 A;  2R4L A;  1GFO A;  1GFP A;  3JCU O;  4O49 A;  1G90 A;  1GFM A;  4FZM A;  2R8A A;  5PRN A;  5GV0 A;  1YS5 A;  2QTK A;  4PUX A;  5DL7 A;  2Y2X A;  6PRN A;  1IZN A;  2F1C X;  4AYI D;  3T20 A;  4Z3T A;  2XMX A;  4LSI A;  2XTQ A;  5E79 O;  2W80 C;  5T5F A;  3O0E A;  1ZHY A;  3SY9 A;  2XTR A;  3A2S X;  3AA1 B;  5G38 A;  3DWO X;  3SZV A;  4QQ1 A;  4RJW A;  3AA6 A;  3T0S A;  2XG6 A;  4O3Y A;  2XE3 A;  7PRN A;  4GCP A;  1HXU A;  2F1V A;  4N59 A;  2YNK A;  2Y0L A;  2ERV A;  3SZD A;  4BUM X;  3VZW X;  1QJP A;  4E1T A;  4E1S A;  4C4V A;  4D5U A;  5KAF O; 
#chains in the Genus database with same CATH homology
 5AFU K;  3V8U A;  1ZHT A;  2FGR A;  2KXP A;  4FRT A;  1Q9G A;  2XE5 A;  2M07 A;  2GE4 A;  4FES A;  3GP6 A;  3NSG A;  4AYN A;  1ZHX A;  2JMM A;  4O4U A;  3SYB A;  3WI4 A;  4C69 X;  4XNK A;  2XE1 A;  1BH3 A;  1PHO A;  3AA0 B;  2J4U P;  8PRN A;  1ORM A;  1OSM A;  2F1T A;  1Q9F A;  3TZG A;  3WI5 A;  4KR8 A;  3LK3 A;  5EE2 A;  3PQS A;  4GCQ A;  1IZN B;  4G75 A;  4FSO A;  4RL9 A;  5ADX L;  3KVD D;  2KZ7 A;  3POQ A;  4JFB A;  2K0L A;  4U9C A;  5G26 A;  3HOL A;  3AA6 B;  1HXT A;  1OPF A;  4RLC A;  4F4B A;  3AA7 A;  3QRA A;  4LSH A;  3VE1 A;  4GCS A;  3SY7 A;  1HXX A;  2X27 X;  2N2M A;  4KR4 A;  2W81 C;  3AAA A;  4G76 A;  2ZFG A;  3SYS A;  4FZN A;  3UAQ A;  2KXP B;  5IYU A;  4RJX A;  3HOE A;  1MPF A;  1P4T A;  3G7G A;  3VZT X;  2MHL A;  4LSF A;  2KDY A;  1BXW A;  1ZHW A;  2M06 A;  2Y0K A;  4AUI A;  2KC0 A;  5AFU L;  1PRN A;  2K4T A;  3PRN A;  3LK4 1;  3RBH A;  4D64 A;  2XE2 A;  4XNL A;  3AAE A;  4B61 A;  4O4X A;  3LK2 A;  5FVN A;  5DL5 A;  3LK3 B;  4FT6 A;  3AAE B;  4FZL A;  1THQ A;  4AKR A;  3VY9 X;  4FMS A;  3FYX A;  4KRA A;  4O3X B;  2N2L A;  3K19 A;  3POU A;  3PQU A;  4AZL A;  2KZ7 B;  2YPV A;  3POX A;  3DA3 A;  2Y7S A;  3VY8 X;  4AYM C;  3HW9 A;  5ADX K;  4FRX A;  1GFQ A;  5DL8 A;  3AA7 B;  2Y0H A;  4N58 A;  2O4V A;  4O3W A;  1GFN A;  4FUV A;  4GF4 A;  2OMF A;  3AAA B;  5JDP A;  3JTY A;  2LFU A;  2MNH A;  3HWB A;  1H6S 1;  4D65 A;  1QJ9 A;  3AA1 A;  2LHF A;  4FOZ A;  4GHB A;  1MM4 A;  1ZHZ A;  3QRC A;  2J1N A;  2ODJ A;  5D5D A;  3VE2 A;  1E54 A;  1MM5 A;  4AFK A;  4AYE C;  3EMN X;  1BT9 A;  4FSP A;  4LSE A;  3C5O A;  3DA4 A;  4AYD C;  3POR A;  3VZU X;  2FGQ X;  4RLB A;  1QJ8 A;  2PRN A;  4O3Z A;  3UPG A;  3LK2 B;  2POR A;  5DL6 A;  3T24 A;  4AKR B;  4AKM A;  3LK4 2;  4JCH A;  2ZLD A;  3UU2 A;  3AA0 A;  1GFO A;  1GFP A;  1G90 A;  4O49 A;  1GFM A;  4FZM A;  5PRN A;  5GV0 A;  1YS5 A;  2QTK A;  4PUX A;  5DL7 A;  2Y2X A;  6PRN A;  1IZN A;  4AYI D;  3T20 A;  4Z3T A;  2XMX A;  4LSI A;  2XTQ A;  2W80 C;  5T5F A;  3O0E A;  1ZHY A;  3SY9 A;  2XTR A;  3A2S X;  3AA1 B;  3SZV A;  4QQ1 A;  4RJW A;  3AA6 A;  3T0S A;  2XG6 A;  4O3Y A;  2XE3 A;  7PRN A;  4GCP A;  1HXU A;  2F1V A;  4N59 A;  2YNK A;  2Y0L A;  2ERV A;  3SZD A;  4BUM X;  3VZW X;  1QJP A;  4E1T A;  4E1S A;  4D5U A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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