3G7GA

Crystal structure of the protein with unknown function from clostridium acetobutylicum atcc 824
Total Genus 35
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
35
sequence length
151
structure length
149
Chain Sequence
EMNYEEVFSITITVDKPILIGQDDIVGRRQLIPIISGKVSGNNFNGKVLPGGIDSQIVRPDGKCELSARYAIRLDDGAAIYIENNGIRTVPDEYIEAVKSGEFVDPNAYYFRTIPTFETYSPKYKWMMNHIFVCCASRENVLLKFYKIS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title The crystal structure of the protein with unknown function from Clostridium acetobutylicum ATCC 824
rcsb
molecule tags Structural genomics, unknown function
source organism Clostridium acetobutylicum atcc 824
molecule keywords UPF0311 protein CA_C3321
total genus 35
structure length 149
sequence length 151
chains with identical sequence B, C, D, E, F, G, H
ec nomenclature
pdb deposition date 2009-02-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF11578 DUF3237 Protein of unknown function (DUF3237)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.160.20 Mainly Beta Beta Barrel Porin Porin 3g7gA00
1MM5A 1Q9GA 2K0LA 1ORMA 2M06A 2M07A 2N2MA 3G7GA 2LHFA 2F1VA 2X27X 4PUXA 2MHLA 1P4TA 1THQA 2N2LA 1QJ9A 1BXWA 2GE4A 3QRAA 1QJPA 3C5OA 3QRCA 2MNHA 3GP6A 2ERVA 4RLCA 1QJ8A 1G90A 1MM4A 1Q9FA 2F1TA 2JMMA
chains in the Genus database with same CATH superfamily
1ZHWA 3NJTA 3DZMA 4UB6O 2J4UP 4AYNA 4KRAA 4AZLA 1ORMA 2J1NA 2M07A 3SY7A 3WI4A 2LHFA 3A0BO 3VY8X 3SYBA 6PRNA 5ADXL 2R4NA 4PUXA 3PGRA 2KZ7A 4FSPA 2AXTO 2YNKA 2MHLA 3BS0A 2LFUA 2XE1A 4AFKA 3UPGA 1OPFA 2IWVA 5G26A 2K4TA 3BRZA 2W80C 2N2LA 3PGUA 2W81C 4RL9A 4Z3TA 1ZHXA 5FVNA 1QJPA 2FGRA 5AFUK 2R88A 4GCSA 3C5OA 4N59A 3JCUO 2WJQA 2QTKA 3LK2A 4F4BA 2KXPB 4O3ZA 3UU2A 1BH3A 1GFQA 2PRNA 5G39A 4FUVA 4K3CA 5KAFO 2XG6A 2WJRA 4K3BA 3AA6A 2XE3A 4FRTA 2F1TA 2FGQX 2ZLDA 5GTIO 4FRXA 4N58A 2YPVA 1MM5A 1Q9GA 3LK3A 3SYSA 4KR8A 3SY9A 1S5LO 1PHOA 2OMFA 1GFOA 1HXTA 4RJXA 3AAEB 4O3YA 5PRNA 3VZUX 5H2FO 4N75A 2X27X 3UAQA 4XNLA 3O0EA 4FSOA 1P4TA 1HXXA 4C00A 3T24A 1THQA 4CTDA 4FOZA 2F1CX 2XE2A 1QJ9A 1BXWA 4G76A 3AA0A 4O3WA 4C4VA 2KC0A 2KZ7B 3VE1A 3HW9A 3QRAA 4B61A 5ADXK 1ZHTA 8PRNA 4C69X 3PGSA 3VZTX 5GTHO 3BRYA 3PF1A 1GFNA 3A2SX 3DWNA 3PQSA 3SZVA 4AKMA 2ERVA 3PQUA 3POUA 3AA7A 4FQEA 4O4XA 1QJ8A 3WU2O 4LSHA 2Y0LA 3LK2B 1IZNB 1Q9FA 5GV0A 5IYUA 3NSGA 4FESA 5JDPA 4FMSA 1MM4A 3AAAA 4AYEC 3HOLA 3DWOX 4QQ1A 3T20A 3WI5A 3AA6B 2KDYA 2M06A 5DL6A 5B5EO 4U9CA 4AKRB 3DA4A 5AFUL 1T16A 2F1VA 2R4OA 4FT6A 3LK3B 4JCHA 4O3XB 5DL7A 4D64A 2R4PA 4O49A 4GCPA 5EE2A 3KVDD 5G3AA 4JFBA 3KZIO 7PRNA 2R89A 2GE4A 4N74A 2ODJA 3SZDA 4UB8O 3POQA 4E1SA 3AA1A 2XTRA 4RJWA 4LSIA 2Y7SA 3K19A 3AA0B 2X9KA 4BUMX 3GP6A 3VZWX 1YS5A 4D65A 1ZHZA 4RLCA 1ZHYA 3POXA 4GCQA 2WVPA 3T0SA 4PR7A 1G90A 1BT9A 3AAEA 1OSMA 4AYDC 2XE5A 4GF4A 3EMNX 3G7GA 3AA7B 3JTYA 3PRNA 4AYMC 4FZNA 3VY9X 2K0LA 3HWBA 1MPFA 4XNKA 5T5FA 2N2MA 3LK41 3RBHA 4AYID 3FYXA 3AAAB 2IWWA 2XMXA 1E54A 4G75A 4IL6O 1GFPA 4FZMA 1H6S1 2XTQA 2Y0HA 5E79O 3TZGA 1GFMA 5D5DA 3LK42 1T1LA 2O4VA 2KXPA 5TISO 5G38A 2PORA 4E1TA 2ZFGA 2R4LA 3DA3A 3QRCA 4RLBA 1IZNA 5KAIO 4O4UA 2R8AA 2MNHA 5DL5A 1HXUA 3V8UA 4C4VB 3AA1B 4KR4A 4D5UA 2Y0KA 5DL8A 4LSFA 3VE2A 3HOEA 4AUIA 4GHBA 2Y2XA 4FZLA 4PJ0O 4AKRA 3A0HO 4LSEA 5B66O 3PORA 2JQYA 2JMMA 1PRNA
chains in the Genus database with same CATH topology
1ZHWA 2J4UP 4AYNA 4KRAA 1ORMA 2J1NA 2M07A 3SY7A 3WI4A 2LHFA 3VY8X 3SYBA 6PRNA 5ADXL 4PUXA 2KZ7A 4FSPA 2YNKA 4AFKA 2MHLA 2LFUA 2XE1A 3UPGA 1OPFA 5G26A 2K4TA 4RL9A 2W80C 2N2LA 2W81C 4Z3TA 1ZHXA 5FVNA 1QJPA 2FGRA 5AFUK 4GCSA 3C5OA 4N59A 2QTKA 3LK2A 4F4BA 2KXPB 4O3ZA 3UU2A 1BH3A 1GFQA 2PRNA 4FUVA 2XG6A 3AA6A 2XE3A 4FRTA 2F1TA 2FGQX 2ZLDA 4FRXA 4N58A 2YPVA 1MM5A 1Q9GA 3LK3A 3SYSA 4KR8A 3SY9A 4RJXA 1PHOA 2OMFA 1GFOA 1HXTA 3VZUX 3AAEB 4O3YA 5PRNA 4AZLA 2X27X 3UAQA 4XNLA 3O0EA 4FSOA 1P4TA 1HXXA 3T24A 1THQA 4FOZA 2XE2A 1QJ9A 1BXWA 4G76A 3AA0A 4O3WA 2KC0A 2KZ7B 3VE1A 3HW9A 3QRAA 4B61A 5ADXK 1ZHTA 8PRNA 4C69X 3VZTX 3PQSA 1GFNA 3A2SX 3SZVA 4AKMA 2ERVA 3PQUA 3POUA 3AA7A 4O4XA 1QJ8A 4LSHA 2Y0LA 3LK2B 1IZNB 1Q9FA 5GV0A 5IYUA 3NSGA 4FESA 5JDPA 4FMSA 1MM4A 3AAAA 4AYEC 3HOLA 3T20A 4QQ1A 3WI5A 3AA6B 2KDYA 2M06A 5DL6A 4U9CA 4AKRB 3DA4A 5AFUL 2F1VA 4FT6A 4O3XB 3LK3B 4JCHA 5DL7A 4D64A 4O49A 4GCPA 5EE2A 3KVDD 4JFBA 7PRNA 2GE4A 2ODJA 3SZDA 4E1SA 3POQA 3AA1A 2XTRA 4RJWA 4LSIA 2Y7SA 3K19A 3AA0B 4BUMX 3GP6A 3VZWX 1YS5A 4D65A 1ZHZA 4RLCA 1ZHYA 3POXA 4GCQA 3T0SA 1G90A 1BT9A 1OSMA 4AYDC 2XE5A 4GF4A 3EMNX 3G7GA 3AA7B 3JTYA 3PRNA 4AYMC 4FZNA 3VY9X 2K0LA 3HWBA 1MPFA 4XNKA 5T5FA 2N2MA 3LK41 3RBHA 4AYID 3FYXA 3AAAB 2XMXA 1E54A 4G75A 1GFPA 4FZMA 1H6S1 2XTQA 2Y0HA 3TZGA 1GFMA 5D5DA 3LK42 2O4VA 2KXPA 2PORA 4E1TA 2ZFGA 3DA3A 3QRCA 4RLBA 1IZNA 4O4UA 2MNHA 5DL5A 1HXUA 3V8UA 3AA1B 4KR4A 4D5UA 2Y0KA 5DL8A 4LSFA 3VE2A 3HOEA 4AUIA 4GHBA 2Y2XA 4FZLA 4AKRA 4LSEA 3PORA 3AAEA 2JMMA 1PRNA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1MM5 A;  1Q9G A;  2K0L A;  1ORM A;  2M06 A;  2M07 A;  2N2M A;  3G7G A;  2LHF A;  2F1V A;  2X27 X;  4PUX A;  2MHL A;  1P4T A;  1THQ A;  2N2L A;  1QJ9 A;  1BXW A;  2GE4 A;  3QRA A;  1QJP A;  3C5O A;  3QRC A;  2MNH A;  3GP6 A;  2ERV A;  4RLC A;  1QJ8 A;  1G90 A;  1MM4 A;  1Q9F A;  2F1T A;  2JMM A; 
#chains in the Genus database with same CATH topology
 1ZHW A;  3NJT A;  3DZM A;  4UB6 O;  2J4U P;  4AYN A;  4KRA A;  4AZL A;  1ORM A;  2J1N A;  2M07 A;  3SY7 A;  3WI4 A;  2LHF A;  3A0B O;  3VY8 X;  3SYB A;  6PRN A;  5ADX L;  2R4N A;  4PUX A;  3PGR A;  2KZ7 A;  4FSP A;  2AXT O;  2YNK A;  2MHL A;  3BS0 A;  2LFU A;  2XE1 A;  4AFK A;  3UPG A;  1OPF A;  2IWV A;  5G26 A;  2K4T A;  3BRZ A;  2W80 C;  2N2L A;  3PGU A;  2W81 C;  4RL9 A;  4Z3T A;  1ZHX A;  5FVN A;  1QJP A;  2FGR A;  5AFU K;  2R88 A;  4GCS A;  3C5O A;  4N59 A;  3JCU O;  2WJQ A;  2QTK A;  3LK2 A;  4F4B A;  2KXP B;  4O3Z A;  3UU2 A;  1BH3 A;  1GFQ A;  2PRN A;  5G39 A;  4FUV A;  4K3C A;  5KAF O;  2XG6 A;  2WJR A;  4K3B A;  3AA6 A;  2XE3 A;  4FRT A;  2F1T A;  2FGQ X;  2ZLD A;  5GTI O;  4FRX A;  4N58 A;  2YPV A;  1MM5 A;  1Q9G A;  3LK3 A;  3SYS A;  4KR8 A;  3SY9 A;  1S5L O;  1PHO A;  2OMF A;  1GFO A;  1HXT A;  4RJX A;  3AAE B;  4O3Y A;  5PRN A;  3VZU X;  5H2F O;  4N75 A;  2X27 X;  3UAQ A;  4XNL A;  3O0E A;  4FSO A;  1P4T A;  1HXX A;  4C00 A;  3T24 A;  1THQ A;  4CTD A;  4FOZ A;  2F1C X;  2XE2 A;  1QJ9 A;  1BXW A;  4G76 A;  3AA0 A;  4O3W A;  4C4V A;  2KC0 A;  2KZ7 B;  3VE1 A;  3HW9 A;  3QRA A;  4B61 A;  5ADX K;  1ZHT A;  8PRN A;  4C69 X;  3PGS A;  3VZT X;  5GTH O;  3BRY A;  3PF1 A;  1GFN A;  3A2S X;  3DWN A;  3PQS A;  3SZV A;  4AKM A;  2ERV A;  3PQU A;  3POU A;  3AA7 A;  4FQE A;  4O4X A;  1QJ8 A;  3WU2 O;  4LSH A;  2Y0L A;  3LK2 B;  1IZN B;  1Q9F A;  5GV0 A;  5IYU A;  3NSG A;  4FES A;  5JDP A;  4FMS A;  1MM4 A;  3AAA A;  4AYE C;  3HOL A;  3DWO X;  4QQ1 A;  3T20 A;  3WI5 A;  3AA6 B;  2KDY A;  2M06 A;  5DL6 A;  5B5E O;  4U9C A;  4AKR B;  3DA4 A;  5AFU L;  1T16 A;  2F1V A;  2R4O A;  4FT6 A;  3LK3 B;  4JCH A;  4O3X B;  5DL7 A;  4D64 A;  2R4P A;  4O49 A;  4GCP A;  5EE2 A;  3KVD D;  5G3A A;  4JFB A;  3KZI O;  7PRN A;  2R89 A;  2GE4 A;  4N74 A;  2ODJ A;  3SZD A;  4UB8 O;  3POQ A;  4E1S A;  3AA1 A;  2XTR A;  4RJW A;  4LSI A;  2Y7S A;  3K19 A;  3AA0 B;  2X9K A;  4BUM X;  3GP6 A;  3VZW X;  1YS5 A;  4D65 A;  1ZHZ A;  4RLC A;  1ZHY A;  3POX A;  4GCQ A;  2WVP A;  3T0S A;  4PR7 A;  1G90 A;  1BT9 A;  3AAE A;  1OSM A;  4AYD C;  2XE5 A;  4GF4 A;  3EMN X;  3G7G A;  3AA7 B;  3JTY A;  3PRN A;  4AYM C;  4FZN A;  3VY9 X;  2K0L A;  3HWB A;  1MPF A;  4XNK A;  5T5F A;  2N2M A;  3LK4 1;  3RBH A;  4AYI D;  3FYX A;  3AAA B;  2IWW A;  2XMX A;  1E54 A;  4G75 A;  4IL6 O;  1GFP A;  4FZM A;  1H6S 1;  2XTQ A;  2Y0H A;  5E79 O;  3TZG A;  1GFM A;  5D5D A;  3LK4 2;  1T1L A;  2O4V A;  2KXP A;  5TIS O;  5G38 A;  2POR A;  4E1T A;  2ZFG A;  2R4L A;  3DA3 A;  3QRC A;  4RLB A;  1IZN A;  5KAI O;  4O4U A;  2R8A A;  2MNH A;  5DL5 A;  1HXU A;  3V8U A;  4C4V B;  3AA1 B;  4KR4 A;  4D5U A;  2Y0K A;  5DL8 A;  4LSF A;  3VE2 A;  3HOE A;  4AUI A;  4GHB A;  2Y2X A;  4FZL A;  4PJ0 O;  4AKR A;  3A0H O;  4LSE A;  5B66 O;  3POR A;  2JQY A;  2JMM A;  1PRN A; 
#chains in the Genus database with same CATH homology
 1ZHW A;  2J4U P;  4AYN A;  4KRA A;  1ORM A;  2J1N A;  2M07 A;  3SY7 A;  3WI4 A;  2LHF A;  3VY8 X;  3SYB A;  6PRN A;  5ADX L;  4PUX A;  2KZ7 A;  4FSP A;  2YNK A;  4AFK A;  2MHL A;  2LFU A;  2XE1 A;  3UPG A;  1OPF A;  5G26 A;  2K4T A;  4RL9 A;  2W80 C;  2N2L A;  2W81 C;  4Z3T A;  1ZHX A;  5FVN A;  1QJP A;  2FGR A;  5AFU K;  4GCS A;  3C5O A;  4N59 A;  2QTK A;  3LK2 A;  4F4B A;  2KXP B;  4O3Z A;  3UU2 A;  1BH3 A;  1GFQ A;  2PRN A;  4FUV A;  2XG6 A;  3AA6 A;  2XE3 A;  4FRT A;  2F1T A;  2FGQ X;  2ZLD A;  4FRX A;  4N58 A;  2YPV A;  1MM5 A;  1Q9G A;  3LK3 A;  3SYS A;  4KR8 A;  3SY9 A;  4RJX A;  1PHO A;  2OMF A;  1GFO A;  1HXT A;  3VZU X;  3AAE B;  4O3Y A;  5PRN A;  4AZL A;  2X27 X;  3UAQ A;  4XNL A;  3O0E A;  4FSO A;  1P4T A;  1HXX A;  3T24 A;  1THQ A;  4FOZ A;  2XE2 A;  1QJ9 A;  1BXW A;  4G76 A;  3AA0 A;  4O3W A;  2KC0 A;  2KZ7 B;  3VE1 A;  3HW9 A;  3QRA A;  4B61 A;  5ADX K;  1ZHT A;  8PRN A;  4C69 X;  3VZT X;  3PQS A;  1GFN A;  3A2S X;  3SZV A;  4AKM A;  2ERV A;  3PQU A;  3POU A;  3AA7 A;  4O4X A;  1QJ8 A;  4LSH A;  2Y0L A;  3LK2 B;  1IZN B;  1Q9F A;  5GV0 A;  5IYU A;  3NSG A;  4FES A;  5JDP A;  4FMS A;  1MM4 A;  3AAA A;  4AYE C;  3HOL A;  3T20 A;  4QQ1 A;  3WI5 A;  3AA6 B;  2KDY A;  2M06 A;  5DL6 A;  4U9C A;  4AKR B;  3DA4 A;  5AFU L;  2F1V A;  4FT6 A;  4O3X B;  3LK3 B;  4JCH A;  5DL7 A;  4D64 A;  4O49 A;  4GCP A;  5EE2 A;  3KVD D;  4JFB A;  7PRN A;  2GE4 A;  2ODJ A;  3SZD A;  4E1S A;  3POQ A;  3AA1 A;  2XTR A;  4RJW A;  4LSI A;  2Y7S A;  3K19 A;  3AA0 B;  4BUM X;  3GP6 A;  3VZW X;  1YS5 A;  4D65 A;  1ZHZ A;  4RLC A;  1ZHY A;  3POX A;  4GCQ A;  3T0S A;  1G90 A;  1BT9 A;  1OSM A;  4AYD C;  2XE5 A;  4GF4 A;  3EMN X;  3G7G A;  3AA7 B;  3JTY A;  3PRN A;  4AYM C;  4FZN A;  3VY9 X;  2K0L A;  3HWB A;  1MPF A;  4XNK A;  5T5F A;  2N2M A;  3LK4 1;  3RBH A;  4AYI D;  3FYX A;  3AAA B;  2XMX A;  1E54 A;  4G75 A;  1GFP A;  4FZM A;  1H6S 1;  2XTQ A;  2Y0H A;  3TZG A;  1GFM A;  5D5D A;  3LK4 2;  2O4V A;  2KXP A;  2POR A;  4E1T A;  2ZFG A;  3DA3 A;  3QRC A;  4RLB A;  1IZN A;  4O4U A;  2MNH A;  5DL5 A;  1HXU A;  3V8U A;  3AA1 B;  4KR4 A;  4D5U A;  2Y0K A;  5DL8 A;  4LSF A;  3VE2 A;  3HOE A;  4AUI A;  4GHB A;  2Y2X A;  4FZL A;  4AKR A;  4LSE A;  3POR A;  3AAE A;  2JMM A;  1PRN A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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