3QRAA

The crystal structure of ail, the attachment invasion locus protein of yersinia pestis
Total Genus 39
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
39
sequence length
157
structure length
152
Chain Sequence
MEGESSISIGYAQSRVKEDGYKLDKNPRGFNLKYRYEFNNDWGVIGSFAQTRRGFEESVLIDGDFKYYSVTAGPVFRINEYVSLYGLLGAGHGKAKFSSFGQSESRSKTSLAYGAGLQFNPHPNFVIDASYEYSKLDDVKVGTWMLGAGYRF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural Insights into Ail-Mediated Adhesion in Yersinia pestis.
pubmed doi rcsb
molecule tags Cell invasion
source organism Yersinia pestis
molecule keywords Attachment invasion locus protein
total genus 39
structure length 152
sequence length 157
ec nomenclature
pdb deposition date 2011-02-17
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.160.20 Mainly Beta Beta Barrel Porin Porin 3qraA00
1P4TA 4RLCA 1QJPA 2ERVA 1Q9FA 4PUXA 1Q9GA 3QRAA 2N2LA 3C5OA 2MNHA 3QRCA 1ORMA 3GP6A 1G90A 1MM5A 2X27X 2LHFA 2F1VA 2JMMA 1BXWA 2N2MA 2M07A 2F1TA 1QJ9A 1MM4A 1QJ8A 2K0LA 2M06A 2MHLA 1THQA 2GE4A 3G7GA
chains in the Genus database with same CATH superfamily
1YS5A 5B5EO 2J4UP 4FZLA 5T5FA 3DA3A 4E1TA 2XE1A 4FRXA 3PF1A 3JTYA 3EMNX 1Q9GA 5G3AA 4C00A 3QRAA 4LSEA 1GFOA 2N2LA 3AA1B 3DZMA 2JQYA 4O4UA 4F4BA 2IWVA 4N75A 3AA7B 4LSIA 1G90A 4PR7A 3HWBA 3PQUA 2R4LA 2YNKA 4UB8O 3SY7A 4QQ1A 6PRNA 4B61A 4E1SA 3PQSA 4FUVA 2K0LA 2R8AA 2J1NA 3AA6A 2PRNA 5PRNA 2M06A 2R88A 4JFBA 1GFPA 3SYBA 4CTDA 1S5LO 3AAAB 4O4XA 3VY8X 1P4TA 4PJ0O 4AYEC 2XG6A 2R4PA 4U9CA 2ERVA 3PRNA 5G38A 3NJTA 3DWOX 2FGQX 4AYID 3PORA 4AYMC 3LK3A 4KR8A 5G39A 5AFUK 5IYUA 2XE5A 4XNKA 5KAFO 1ORMA 2KXPA 3NSGA 4O3WA 1ZHTA 1OPFA 2X9KA 3SY9A 3KVDD 3AAEA 3WU2O 4G75A 2F1TA 2F1CX 3AA0A 5TISO 1MM4A 4XNLA 4Z3TA 2KZ7B 1IZNA 4C4VA 4N59A 2YPVA 2XMXA 3DWNA 4GCSA 4G76A 2O4VA 7PRNA 3VZUX 3HOEA 5GV0A 3BRZA 4UB6O 2WJRA 2XE3A 2MHLA 1GFNA 3POXA 4LSFA 5EE2A 3LK2A 2XE2A 3V8UA 1HXTA 4D5UA 2ZLDA 1PHOA 3WI4A 3A0BO 3PGSA 2Y2XA 3PGRA 4FQEA 3T24A 4AKRA 4FZMA 4KR4A 4RLCA 3LK42 5DL6A 3HW9A 1PRNA 1QJPA 4FZNA 4BUMX 1ZHYA 4RJXA 1Q9FA 4AKMA 4PUXA 1GFMA 3POUA 5G26A 2Y0HA 4AFKA 5AFUL 3VZWX 3WI5A 4FOZA 3UAQA 1ZHZA 4FSOA 1T1LA 4AUIA 2OMFA 3AA7A 2R4NA 2KC0A 4FMSA 3LK41 1MM5A 4O3YA 1ZHWA 1T16A 2WJQA 2ZFGA 2WVPA 3RBHA 3SZDA 3VE2A 2F1VA 2JMMA 3BRYA 3AAEB 1E54A 3FYXA 4GF4A 3VZTX 5JDPA 3SZVA 2R89A 3AA0B 4KRAA 4GHBA 5E79O 5GTHO 2FGRA 1IZNB 4C4VB 4AYNA 1ZHXA 3K19A 2XTRA 3T0SA 1BT9A 3AA6B 4LSHA 4O3ZA 5KAIO 5GTIO 3AAAA 3LK2B 3VY9X 2Y0KA 2PORA 3SYSA 1HXXA 2Y0LA 2W81C 5ADXL 1THQA 2AXTO 1OSMA 4AKRB 4GCPA 3TZGA 4IL6O 3KZIO 3UPGA 1HXUA 5B66O 4FSPA 5DL7A 1GFQA 2W80C 3BS0A 3PGUA 2KDYA 4K3CA 3VE1A 3AA1A 2QTKA 3C5OA 3HOLA 2MNHA 3LK3B 2ODJA 5D5DA 3QRCA 3O0EA 3GP6A 4GCQA 2X27X 4FRTA 2KXPB 2LHFA 2N2MA 1BXWA 4O49A 2M07A 1H6S1 8PRNA 4JCHA 3A0HO 4K3BA 3A2SX 4RJWA 2KZ7A 1QJ9A 4N74A 4O3XB 1QJ8A 4RLBA 3JCUO 1BH3A 2K4TA 2R4OA 3UU2A 4RL9A 5DL8A 4FT6A 5FVNA 4C69X 5ADXK 2LFUA 2XTQA 3POQA 4D64A 4AYDC 3DA4A 5DL5A 4AZLA 4FESA 4N58A 4D65A 2IWWA 3T20A 2Y7SA 5H2FO 2GE4A 3G7GA 1MPFA
chains in the Genus database with same CATH topology
1YS5A 2J4UP 4FZLA 5T5FA 3DA3A 4E1TA 2XE1A 4FRXA 3JTYA 3EMNX 1Q9GA 3QRAA 4LSEA 1GFOA 2N2LA 3AA1B 4O4UA 4F4BA 3AA7B 4LSIA 1G90A 3HWBA 3PQUA 2YNKA 3SY7A 4QQ1A 6PRNA 4B61A 3PQSA 4FUVA 2K0LA 2J1NA 3AA6A 2PRNA 5PRNA 2M06A 4JFBA 1GFPA 3SYBA 3AAAB 4O4XA 3VY8X 1P4TA 4AYEC 2XG6A 4U9CA 2ERVA 3PRNA 2FGQX 4AYID 3PORA 4AYMC 3LK3A 4KR8A 5IYUA 2XE5A 4XNKA 1ORMA 2KXPA 3NSGA 4O3WA 1ZHTA 1OPFA 3SY9A 3KVDD 3AAEA 4G75A 2F1TA 3AA0A 1MM4A 4XNLA 4Z3TA 2KZ7B 1IZNA 4N59A 2YPVA 2XMXA 4GCSA 4G76A 2O4VA 7PRNA 3VZUX 3HOEA 5GV0A 5EE2A 2XE3A 3POXA 2MHLA 1GFNA 4LSFA 3V8UA 3LK2A 2XE2A 1HXTA 4D5UA 2ZLDA 1PHOA 3WI4A 4AKRA 4E1SA 2Y2XA 3T24A 5AFUK 4FZMA 4KR4A 4RLCA 3LK42 5DL6A 3HW9A 1PRNA 1QJPA 4FZNA 4BUMX 1ZHYA 4RJXA 1Q9FA 4AKMA 4PUXA 1GFMA 3POUA 5G26A 2Y0HA 4AFKA 5AFUL 3VZWX 3WI5A 4FOZA 3UAQA 1ZHZA 4FSOA 4AUIA 2OMFA 3AA7A 2KC0A 4FMSA 3LK41 1MM5A 4O3YA 1ZHWA 2ZFGA 3RBHA 3VE2A 3SZDA 4C69X 2F1VA 2JMMA 4GF4A 3AAEB 1E54A 3FYXA 5JDPA 3VZTX 3SZVA 3AA0B 4KRAA 4GHBA 2FGRA 1IZNB 4AYNA 1ZHXA 3K19A 2XTRA 3T0SA 1BT9A 3AA6B 4LSHA 4O3ZA 3VY9X 3AAAA 3LK2B 5ADXL 2Y0KA 2PORA 3SYSA 1HXXA 2Y0LA 2W81C 1THQA 4AKRB 1OSMA 4GCPA 3TZGA 3UPGA 1HXUA 4FSPA 5DL7A 1GFQA 2W80C 3VE1A 2KDYA 3AA1A 2QTKA 3C5OA 3HOLA 2MNHA 3LK3B 2ODJA 5D5DA 3QRCA 3O0EA 3GP6A 4GCQA 2X27X 4FRTA 2KXPB 2LHFA 2N2MA 1BXWA 4O49A 2M07A 1H6S1 8PRNA 4JCHA 4RJWA 3A2SX 2KZ7A 1QJ9A 4O3XB 4RLBA 1QJ8A 1BH3A 2K4TA 3UU2A 4RL9A 5DL8A 4FT6A 5FVNA 5ADXK 2LFUA 2XTQA 3POQA 4D64A 4AYDC 3DA4A 5DL5A 4AZLA 4FESA 4N58A 4D65A 3T20A 2Y7SA 2GE4A 3G7GA 1MPFA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1P4T A;  4RLC A;  1QJP A;  2ERV A;  1Q9F A;  4PUX A;  1Q9G A;  3QRA A;  2N2L A;  3C5O A;  2MNH A;  3QRC A;  1ORM A;  3GP6 A;  1G90 A;  1MM5 A;  2X27 X;  2LHF A;  2F1V A;  2JMM A;  1BXW A;  2N2M A;  2M07 A;  2F1T A;  1QJ9 A;  1MM4 A;  1QJ8 A;  2K0L A;  2M06 A;  2MHL A;  1THQ A;  2GE4 A;  3G7G A; 
#chains in the Genus database with same CATH topology
 1YS5 A;  5B5E O;  2J4U P;  4FZL A;  5T5F A;  3DA3 A;  4E1T A;  2XE1 A;  4FRX A;  3PF1 A;  3JTY A;  3EMN X;  1Q9G A;  5G3A A;  4C00 A;  3QRA A;  4LSE A;  1GFO A;  2N2L A;  3AA1 B;  3DZM A;  2JQY A;  4O4U A;  4F4B A;  2IWV A;  4N75 A;  3AA7 B;  4LSI A;  1G90 A;  4PR7 A;  3HWB A;  3PQU A;  2R4L A;  2YNK A;  4UB8 O;  3SY7 A;  4QQ1 A;  6PRN A;  4B61 A;  4E1S A;  3PQS A;  4FUV A;  2K0L A;  2R8A A;  2J1N A;  3AA6 A;  2PRN A;  5PRN A;  2M06 A;  2R88 A;  4JFB A;  1GFP A;  3SYB A;  4CTD A;  1S5L O;  3AAA B;  4O4X A;  3VY8 X;  1P4T A;  4PJ0 O;  4AYE C;  2XG6 A;  2R4P A;  4U9C A;  2ERV A;  3PRN A;  5G38 A;  3NJT A;  3DWO X;  2FGQ X;  4AYI D;  3POR A;  4AYM C;  3LK3 A;  4KR8 A;  5G39 A;  5AFU K;  5IYU A;  2XE5 A;  4XNK A;  5KAF O;  1ORM A;  2KXP A;  3NSG A;  4O3W A;  1ZHT A;  1OPF A;  2X9K A;  3SY9 A;  3KVD D;  3AAE A;  3WU2 O;  4G75 A;  2F1T A;  2F1C X;  3AA0 A;  5TIS O;  1MM4 A;  4XNL A;  4Z3T A;  2KZ7 B;  1IZN A;  4C4V A;  4N59 A;  2YPV A;  2XMX A;  3DWN A;  4GCS A;  4G76 A;  2O4V A;  7PRN A;  3VZU X;  3HOE A;  5GV0 A;  3BRZ A;  4UB6 O;  2WJR A;  2XE3 A;  2MHL A;  1GFN A;  3POX A;  4LSF A;  5EE2 A;  3LK2 A;  2XE2 A;  3V8U A;  1HXT A;  4D5U A;  2ZLD A;  1PHO A;  3WI4 A;  3A0B O;  3PGS A;  2Y2X A;  3PGR A;  4FQE A;  3T24 A;  4AKR A;  4FZM A;  4KR4 A;  4RLC A;  3LK4 2;  5DL6 A;  3HW9 A;  1PRN A;  1QJP A;  4FZN A;  4BUM X;  1ZHY A;  4RJX A;  1Q9F A;  4AKM A;  4PUX A;  1GFM A;  3POU A;  5G26 A;  2Y0H A;  4AFK A;  5AFU L;  3VZW X;  3WI5 A;  4FOZ A;  3UAQ A;  1ZHZ A;  4FSO A;  1T1L A;  4AUI A;  2OMF A;  3AA7 A;  2R4N A;  2KC0 A;  4FMS A;  3LK4 1;  1MM5 A;  4O3Y A;  1ZHW A;  1T16 A;  2WJQ A;  2ZFG A;  2WVP A;  3RBH A;  3SZD A;  3VE2 A;  2F1V A;  2JMM A;  3BRY A;  3AAE B;  1E54 A;  3FYX A;  4GF4 A;  3VZT X;  5JDP A;  3SZV A;  2R89 A;  3AA0 B;  4KRA A;  4GHB A;  5E79 O;  5GTH O;  2FGR A;  1IZN B;  4C4V B;  4AYN A;  1ZHX A;  3K19 A;  2XTR A;  3T0S A;  1BT9 A;  3AA6 B;  4LSH A;  4O3Z A;  5KAI O;  5GTI O;  3AAA A;  3LK2 B;  3VY9 X;  2Y0K A;  2POR A;  3SYS A;  1HXX A;  2Y0L A;  2W81 C;  5ADX L;  1THQ A;  2AXT O;  1OSM A;  4AKR B;  4GCP A;  3TZG A;  4IL6 O;  3KZI O;  3UPG A;  1HXU A;  5B66 O;  4FSP A;  5DL7 A;  1GFQ A;  2W80 C;  3BS0 A;  3PGU A;  2KDY A;  4K3C A;  3VE1 A;  3AA1 A;  2QTK A;  3C5O A;  3HOL A;  2MNH A;  3LK3 B;  2ODJ A;  5D5D A;  3QRC A;  3O0E A;  3GP6 A;  4GCQ A;  2X27 X;  4FRT A;  2KXP B;  2LHF A;  2N2M A;  1BXW A;  4O49 A;  2M07 A;  1H6S 1;  8PRN A;  4JCH A;  3A0H O;  4K3B A;  3A2S X;  4RJW A;  2KZ7 A;  1QJ9 A;  4N74 A;  4O3X B;  1QJ8 A;  4RLB A;  3JCU O;  1BH3 A;  2K4T A;  2R4O A;  3UU2 A;  4RL9 A;  5DL8 A;  4FT6 A;  5FVN A;  4C69 X;  5ADX K;  2LFU A;  2XTQ A;  3POQ A;  4D64 A;  4AYD C;  3DA4 A;  5DL5 A;  4AZL A;  4FES A;  4N58 A;  4D65 A;  2IWW A;  3T20 A;  2Y7S A;  5H2F O;  2GE4 A;  3G7G A;  1MPF A; 
#chains in the Genus database with same CATH homology
 1YS5 A;  2J4U P;  4FZL A;  5T5F A;  3DA3 A;  4E1T A;  2XE1 A;  4FRX A;  3JTY A;  3EMN X;  1Q9G A;  3QRA A;  4LSE A;  1GFO A;  2N2L A;  3AA1 B;  4O4U A;  4F4B A;  3AA7 B;  4LSI A;  1G90 A;  3HWB A;  3PQU A;  2YNK A;  3SY7 A;  4QQ1 A;  6PRN A;  4B61 A;  3PQS A;  4FUV A;  2K0L A;  2J1N A;  3AA6 A;  2PRN A;  5PRN A;  2M06 A;  4JFB A;  1GFP A;  3SYB A;  3AAA B;  4O4X A;  3VY8 X;  1P4T A;  4AYE C;  2XG6 A;  4U9C A;  2ERV A;  3PRN A;  2FGQ X;  4AYI D;  3POR A;  4AYM C;  3LK3 A;  4KR8 A;  5IYU A;  2XE5 A;  4XNK A;  1ORM A;  2KXP A;  3NSG A;  4O3W A;  1ZHT A;  1OPF A;  3SY9 A;  3KVD D;  3AAE A;  4G75 A;  2F1T A;  3AA0 A;  1MM4 A;  4XNL A;  4Z3T A;  2KZ7 B;  1IZN A;  4N59 A;  2YPV A;  2XMX A;  4GCS A;  4G76 A;  2O4V A;  7PRN A;  3VZU X;  3HOE A;  5GV0 A;  5EE2 A;  2XE3 A;  3POX A;  2MHL A;  1GFN A;  4LSF A;  3V8U A;  3LK2 A;  2XE2 A;  1HXT A;  4D5U A;  2ZLD A;  1PHO A;  3WI4 A;  4AKR A;  4E1S A;  2Y2X A;  3T24 A;  5AFU K;  4FZM A;  4KR4 A;  4RLC A;  3LK4 2;  5DL6 A;  3HW9 A;  1PRN A;  1QJP A;  4FZN A;  4BUM X;  1ZHY A;  4RJX A;  1Q9F A;  4AKM A;  4PUX A;  1GFM A;  3POU A;  5G26 A;  2Y0H A;  4AFK A;  5AFU L;  3VZW X;  3WI5 A;  4FOZ A;  3UAQ A;  1ZHZ A;  4FSO A;  4AUI A;  2OMF A;  3AA7 A;  2KC0 A;  4FMS A;  3LK4 1;  1MM5 A;  4O3Y A;  1ZHW A;  2ZFG A;  3RBH A;  3VE2 A;  3SZD A;  4C69 X;  2F1V A;  2JMM A;  4GF4 A;  3AAE B;  1E54 A;  3FYX A;  5JDP A;  3VZT X;  3SZV A;  3AA0 B;  4KRA A;  4GHB A;  2FGR A;  1IZN B;  4AYN A;  1ZHX A;  3K19 A;  2XTR A;  3T0S A;  1BT9 A;  3AA6 B;  4LSH A;  4O3Z A;  3VY9 X;  3AAA A;  3LK2 B;  5ADX L;  2Y0K A;  2POR A;  3SYS A;  1HXX A;  2Y0L A;  2W81 C;  1THQ A;  4AKR B;  1OSM A;  4GCP A;  3TZG A;  3UPG A;  1HXU A;  4FSP A;  5DL7 A;  1GFQ A;  2W80 C;  3VE1 A;  2KDY A;  3AA1 A;  2QTK A;  3C5O A;  3HOL A;  2MNH A;  3LK3 B;  2ODJ A;  5D5D A;  3QRC A;  3O0E A;  3GP6 A;  4GCQ A;  2X27 X;  4FRT A;  2KXP B;  2LHF A;  2N2M A;  1BXW A;  4O49 A;  2M07 A;  1H6S 1;  8PRN A;  4JCH A;  4RJW A;  3A2S X;  2KZ7 A;  1QJ9 A;  4O3X B;  4RLB A;  1QJ8 A;  1BH3 A;  2K4T A;  3UU2 A;  4RL9 A;  5DL8 A;  4FT6 A;  5FVN A;  5ADX K;  2LFU A;  2XTQ A;  3POQ A;  4D64 A;  4AYD C;  3DA4 A;  5DL5 A;  4AZL A;  4FES A;  4N58 A;  4D65 A;  3T20 A;  2Y7S A;  2GE4 A;  3G7G A;  1MPF A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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