3QRAA

The crystal structure of ail, the attachment invasion locus protein of yersinia pestis
Total Genus 39
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
39
sequence length
157
structure length
152
Chain Sequence
MEGESSISIGYAQSRVKEDGYKLDKNPRGFNLKYRYEFNNDWGVIGSFAQTRRGFEESVLIDGDFKYYSVTAGPVFRINEYVSLYGLLGAGHGKAKFSSFGQSESRSKTSLAYGAGLQFNPHPNFVIDASYEYSKLDDVKVGTWMLGAGYRF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural Insights into Ail-Mediated Adhesion in Yersinia pestis.
pubmed doi rcsb
molecule tags Cell invasion
source organism Yersinia pestis
molecule keywords Attachment invasion locus protein
total genus 39
structure length 152
sequence length 157
ec nomenclature
pdb deposition date 2011-02-17
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.160.20 Mainly Beta Beta Barrel Porin Porin 3qraA00
4RLCA 1P4TA 1G90A 3QRAA 2F1TA 2K0LA 1BXWA 2F1VA 1MM4A 2X27X 3C5OA 2M06A 2N2MA 2LHFA 1QJ9A 3GP6A 1Q9FA 1THQA 4PUXA 1QJPA 3QRCA 1MM5A 1Q9GA 2N2LA 1QJ8A 2JMMA 1ORMA 2GE4A 2MHLA 2ERVA 2M07A 3G7GA 2MNHA
chains in the Genus database with same CATH superfamily
4O4UA 1E54A 2KC0A 1BT9A 2X9KA 4RLCA 4Z3TA 4GCPA 1G90A 5ADXK 5GTIO 5G3AA 4AYMC 8PRNA 3V8UA 4BUMX 3DWOX 3TZGA 3KZIO 4O4XA 4FESA 2M06A 4FT6A 2R88A 2WJRA 4O3WA 2LHFA 4UB6O 1OSMA 2QTKA 1Q9FA 3HOLA 1THQA 4LSEA 3A2SX 2WJQA 2JQYA 1GFMA 3HWBA 4AYNA 3LK3B 4FUVA 4RLBA 2XMXA 1Q9GA 3UPGA 3AAEB 3LK3A 2LFUA 4JCHA 1BH3A 5ADXL 3T24A 3AAEA 2JMMA 3RBHA 5B66O 3SYBA 2Y7SA 1PHOA 5G26A 2W80C 5PRNA 3BRZA 2XTQA 4FZLA 4FRTA 2ODJA 5DL6A 3O0EA 3WI5A 4C00A 5H2FO 1ZHXA 2IWVA 4RJXA 4AKRB 5KAFO 3POXA 2XE2A 4AKRA 1GFPA 4FSOA 4CTDA 2FGRA 4LSIA 1HXXA 2X27X 3C5OA 1T16A 3DA3A 3UU2A 4FOZA 2IWWA 1QJ9A 3A0HO 3GP6A 3DWNA 3WI4A 2KXPB 3PGRA 4XNKA 2KXPA 2AXTO 5G39A 2KDYA 2O4VA 1GFQA 4FRXA 3PQUA 2N2LA 5G38A 4D65A 1OPFA 2ZLDA 4O3XB 3HW9A 1QJ8A 2PRNA 5D5DA 4C69X 3VZUX 1ORMA 3A0BO 4N75A 2F1CX 4GF4A 2MHLA 4AZLA 4GHBA 4IL6O 2XE3A 2M07A 3JCUO 3PORA 5T5FA 3SY9A 3VY8X 3VZWX 3LK41 2ZFGA 3T20A 3AA6B 5GV0A 3AA6A 4AKMA 4AYDC 1GFNA 2Y0HA 3QRAA 4GCSA 1T1LA 4K3BA 5IYUA 3BRYA 3HOEA 5E79O 3VE1A 2R4OA 2F1VA 2XE1A 1MM4A 2R8AA 3SY7A 1MPFA 3SYSA 2FGQX 1YS5A 2PORA 2XTRA 2Y0LA 1H6S1 3UAQA 4D5UA 4LSHA 3PRNA 3FYXA 4N74A 4UB8O 3AA1B 1QJPA 3POQA 4E1SA 5AFUK 5GTHO 4KR8A 3QRCA 5TISO 1GFOA 3AA1A 1MM5A 2YNKA 3BS0A 2Y2XA 3LK42 4FZMA 3VE2A 3VZTX 4U9CA 1ZHYA 4O3YA 4C4VB 2KZ7B 3PQSA 4QQ1A 1ZHTA 3SZVA 4C4VA 3T0SA 2KZ7A 5EE2A 3VY9X 5B5EO 4RJWA 1PRNA 5DL8A 3G7GA 1HXTA 5DL5A 4AFKA 7PRNA 4PR7A 2R4PA 3KVDD 3POUA 2XE5A 1ZHWA 3NSGA 1P4TA 3NJTA 3DA4A 2F1TA 2OMFA 4KR4A 2K0LA 1S5LO 4N59A 4N58A 5FVNA 2Y0KA 1BXWA 5JDPA 3AA0B 1IZNB 3LK2B 3WU2O 2K4TA 3DZMA 2N2MA 3AA0A 4O49A 4RL9A 1IZNA 3EMNX 3LK2A 3AA7B 3AAAB 4JFBA 4D64A 5DL7A 4KRAA 4FQEA 2XG6A 3AA7A 3AAAA 4PUXA 2W81C 3SZDA 4F4BA 4FMSA 4GCQA 4K3CA 4PJ0O 4FSPA 3K19A 3PGUA 4E1TA 4FZNA 4LSFA 3PF1A 2J1NA 4G75A 1HXUA 5KAIO 4G76A 2R4NA 2GE4A 2R4LA 2YPVA 4AYEC 4AYID 6PRNA 2J4UP 2WVPA 2ERVA 4O3ZA 4XNLA 4AUIA 2R89A 3PGSA 5AFUL 4B61A 1ZHZA 3JTYA 2MNHA
chains in the Genus database with same CATH topology
4O4UA 1E54A 2KC0A 1BT9A 4RLCA 4Z3TA 4GCPA 1G90A 4AYMC 8PRNA 3V8UA 4BUMX 3TZGA 4O4XA 4FESA 2M06A 4FT6A 4O3WA 2LHFA 1OSMA 2QTKA 1Q9FA 3HOLA 1THQA 4LSEA 3A2SX 1GFMA 3HWBA 4AYNA 3LK3B 4FUVA 2XMXA 1Q9GA 3UPGA 3AAEB 3LK3A 2LFUA 4JCHA 1BH3A 5ADXL 3T24A 3AAEA 2JMMA 3RBHA 3SYBA 2Y7SA 1PHOA 5G26A 2W80C 5PRNA 2XTQA 4FZLA 4FRTA 2ODJA 5DL6A 3O0EA 3WI5A 1ZHXA 4AKRB 4RJXA 3POXA 2XE2A 4AKRA 1GFPA 4FSOA 2FGRA 4LSIA 1HXXA 2X27X 3C5OA 3DA3A 3UU2A 4FOZA 1QJ9A 3GP6A 3WI4A 2KXPB 4XNKA 2KXPA 2KDYA 2O4VA 1GFQA 4FRXA 3PQUA 2N2LA 4D65A 1OPFA 2ZLDA 4O3XB 3HW9A 1QJ8A 2PRNA 5D5DA 4C69X 3VZUX 1ORMA 4GF4A 2MHLA 4AZLA 4GHBA 2XE3A 2M07A 5T5FA 3PORA 3SY9A 3VY8X 3VZWX 3LK41 2ZFGA 3T20A 3AA6B 5GV0A 3AA6A 4AKMA 4AYDC 1GFNA 2Y0HA 3QRAA 4GCSA 5IYUA 3HOEA 3VE1A 2F1VA 2XE1A 1MM4A 3SY7A 3SYSA 1MPFA 2FGQX 1YS5A 2PORA 2XTRA 2Y0LA 1H6S1 3UAQA 4D5UA 4LSHA 3PRNA 3FYXA 3AA1B 1QJPA 3POQA 4E1SA 5AFUK 4KR8A 3QRCA 1GFOA 3AA1A 1MM5A 2YNKA 3LK42 2Y2XA 4FZMA 3VE2A 3VZTX 4U9CA 1ZHYA 4O3YA 2KZ7B 3PQSA 4QQ1A 1ZHTA 3SZVA 3T0SA 2KZ7A 5EE2A 3VY9X 4RJWA 1PRNA 5DL8A 3G7GA 1HXTA 5DL5A 4AFKA 7PRNA 3KVDD 3POUA 2XE5A 1ZHWA 3NSGA 1P4TA 3DA4A 2F1TA 2OMFA 4KR4A 2K0LA 4N59A 4N58A 5FVNA 2Y0KA 1BXWA 5JDPA 3AA0B 1IZNB 3LK2B 5ADXK 2K4TA 4O49A 2N2MA 3AA0A 4RLBA 4RL9A 1IZNA 3EMNX 3LK2A 3AA7B 3AAAB 4JFBA 4D64A 5DL7A 4KRAA 2XG6A 3AA7A 3AAAA 4PUXA 2W81C 3SZDA 4F4BA 4FMSA 4GCQA 4FSPA 3K19A 4E1TA 4FZNA 4LSFA 2J1NA 4G75A 1HXUA 4G76A 4AYID 2GE4A 2YPVA 4AYEC 6PRNA 2J4UP 4O3ZA 2ERVA 4XNLA 4AUIA 5AFUL 4B61A 1ZHZA 3JTYA 2MNHA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4RLC A;  1P4T A;  1G90 A;  3QRA A;  2F1T A;  2K0L A;  1BXW A;  2F1V A;  1MM4 A;  2X27 X;  3C5O A;  2M06 A;  2N2M A;  2LHF A;  1QJ9 A;  3GP6 A;  1Q9F A;  1THQ A;  4PUX A;  1QJP A;  3QRC A;  1MM5 A;  1Q9G A;  2N2L A;  1QJ8 A;  2JMM A;  1ORM A;  2GE4 A;  2MHL A;  2ERV A;  2M07 A;  3G7G A;  2MNH A; 
#chains in the Genus database with same CATH topology
 4O4U A;  1E54 A;  2KC0 A;  1BT9 A;  2X9K A;  4RLC A;  4Z3T A;  4GCP A;  1G90 A;  5ADX K;  5GTI O;  5G3A A;  4AYM C;  8PRN A;  3V8U A;  4BUM X;  3DWO X;  3TZG A;  3KZI O;  4O4X A;  4FES A;  2M06 A;  4FT6 A;  2R88 A;  2WJR A;  4O3W A;  2LHF A;  4UB6 O;  1OSM A;  2QTK A;  1Q9F A;  3HOL A;  1THQ A;  4LSE A;  3A2S X;  2WJQ A;  2JQY A;  1GFM A;  3HWB A;  4AYN A;  3LK3 B;  4FUV A;  4RLB A;  2XMX A;  1Q9G A;  3UPG A;  3AAE B;  3LK3 A;  2LFU A;  4JCH A;  1BH3 A;  5ADX L;  3T24 A;  3AAE A;  2JMM A;  3RBH A;  5B66 O;  3SYB A;  2Y7S A;  1PHO A;  5G26 A;  2W80 C;  5PRN A;  3BRZ A;  2XTQ A;  4FZL A;  4FRT A;  2ODJ A;  5DL6 A;  3O0E A;  3WI5 A;  4C00 A;  5H2F O;  1ZHX A;  2IWV A;  4RJX A;  4AKR B;  5KAF O;  3POX A;  2XE2 A;  4AKR A;  1GFP A;  4FSO A;  4CTD A;  2FGR A;  4LSI A;  1HXX A;  2X27 X;  3C5O A;  1T16 A;  3DA3 A;  3UU2 A;  4FOZ A;  2IWW A;  1QJ9 A;  3A0H O;  3GP6 A;  3DWN A;  3WI4 A;  2KXP B;  3PGR A;  4XNK A;  2KXP A;  2AXT O;  5G39 A;  2KDY A;  2O4V A;  1GFQ A;  4FRX A;  3PQU A;  2N2L A;  5G38 A;  4D65 A;  1OPF A;  2ZLD A;  4O3X B;  3HW9 A;  1QJ8 A;  2PRN A;  5D5D A;  4C69 X;  3VZU X;  1ORM A;  3A0B O;  4N75 A;  2F1C X;  4GF4 A;  2MHL A;  4AZL A;  4GHB A;  4IL6 O;  2XE3 A;  2M07 A;  3JCU O;  3POR A;  5T5F A;  3SY9 A;  3VY8 X;  3VZW X;  3LK4 1;  2ZFG A;  3T20 A;  3AA6 B;  5GV0 A;  3AA6 A;  4AKM A;  4AYD C;  1GFN A;  2Y0H A;  3QRA A;  4GCS A;  1T1L A;  4K3B A;  5IYU A;  3BRY A;  3HOE A;  5E79 O;  3VE1 A;  2R4O A;  2F1V A;  2XE1 A;  1MM4 A;  2R8A A;  3SY7 A;  1MPF A;  3SYS A;  2FGQ X;  1YS5 A;  2POR A;  2XTR A;  2Y0L A;  1H6S 1;  3UAQ A;  4D5U A;  4LSH A;  3PRN A;  3FYX A;  4N74 A;  4UB8 O;  3AA1 B;  1QJP A;  3POQ A;  4E1S A;  5AFU K;  5GTH O;  4KR8 A;  3QRC A;  5TIS O;  1GFO A;  3AA1 A;  1MM5 A;  2YNK A;  3BS0 A;  2Y2X A;  3LK4 2;  4FZM A;  3VE2 A;  3VZT X;  4U9C A;  1ZHY A;  4O3Y A;  4C4V B;  2KZ7 B;  3PQS A;  4QQ1 A;  1ZHT A;  3SZV A;  4C4V A;  3T0S A;  2KZ7 A;  5EE2 A;  3VY9 X;  5B5E O;  4RJW A;  1PRN A;  5DL8 A;  3G7G A;  1HXT A;  5DL5 A;  4AFK A;  7PRN A;  4PR7 A;  2R4P A;  3KVD D;  3POU A;  2XE5 A;  1ZHW A;  3NSG A;  1P4T A;  3NJT A;  3DA4 A;  2F1T A;  2OMF A;  4KR4 A;  2K0L A;  1S5L O;  4N59 A;  4N58 A;  5FVN A;  2Y0K A;  1BXW A;  5JDP A;  3AA0 B;  1IZN B;  3LK2 B;  3WU2 O;  2K4T A;  3DZM A;  2N2M A;  3AA0 A;  4O49 A;  4RL9 A;  1IZN A;  3EMN X;  3LK2 A;  3AA7 B;  3AAA B;  4JFB A;  4D64 A;  5DL7 A;  4KRA A;  4FQE A;  2XG6 A;  3AA7 A;  3AAA A;  4PUX A;  2W81 C;  3SZD A;  4F4B A;  4FMS A;  4GCQ A;  4K3C A;  4PJ0 O;  4FSP A;  3K19 A;  3PGU A;  4E1T A;  4FZN A;  4LSF A;  3PF1 A;  2J1N A;  4G75 A;  1HXU A;  5KAI O;  4G76 A;  2R4N A;  2GE4 A;  2R4L A;  2YPV A;  4AYE C;  4AYI D;  6PRN A;  2J4U P;  2WVP A;  2ERV A;  4O3Z A;  4XNL A;  4AUI A;  2R89 A;  3PGS A;  5AFU L;  4B61 A;  1ZHZ A;  3JTY A;  2MNH A; 
#chains in the Genus database with same CATH homology
 4O4U A;  1E54 A;  2KC0 A;  1BT9 A;  4RLC A;  4Z3T A;  4GCP A;  1G90 A;  4AYM C;  8PRN A;  3V8U A;  4BUM X;  3TZG A;  4O4X A;  4FES A;  2M06 A;  4FT6 A;  4O3W A;  2LHF A;  1OSM A;  2QTK A;  1Q9F A;  3HOL A;  1THQ A;  4LSE A;  3A2S X;  1GFM A;  3HWB A;  4AYN A;  3LK3 B;  4FUV A;  2XMX A;  1Q9G A;  3UPG A;  3AAE B;  3LK3 A;  2LFU A;  4JCH A;  1BH3 A;  5ADX L;  3T24 A;  3AAE A;  2JMM A;  3RBH A;  3SYB A;  2Y7S A;  1PHO A;  5G26 A;  2W80 C;  5PRN A;  2XTQ A;  4FZL A;  4FRT A;  2ODJ A;  5DL6 A;  3O0E A;  3WI5 A;  1ZHX A;  4AKR B;  4RJX A;  3POX A;  2XE2 A;  4AKR A;  1GFP A;  4FSO A;  2FGR A;  4LSI A;  1HXX A;  2X27 X;  3C5O A;  3DA3 A;  3UU2 A;  4FOZ A;  1QJ9 A;  3GP6 A;  3WI4 A;  2KXP B;  4XNK A;  2KXP A;  2KDY A;  2O4V A;  1GFQ A;  4FRX A;  3PQU A;  2N2L A;  4D65 A;  1OPF A;  2ZLD A;  4O3X B;  3HW9 A;  1QJ8 A;  2PRN A;  5D5D A;  4C69 X;  3VZU X;  1ORM A;  4GF4 A;  2MHL A;  4AZL A;  4GHB A;  2XE3 A;  2M07 A;  5T5F A;  3POR A;  3SY9 A;  3VY8 X;  3VZW X;  3LK4 1;  2ZFG A;  3T20 A;  3AA6 B;  5GV0 A;  3AA6 A;  4AKM A;  4AYD C;  1GFN A;  2Y0H A;  3QRA A;  4GCS A;  5IYU A;  3HOE A;  3VE1 A;  2F1V A;  2XE1 A;  1MM4 A;  3SY7 A;  3SYS A;  1MPF A;  2FGQ X;  1YS5 A;  2POR A;  2XTR A;  2Y0L A;  1H6S 1;  3UAQ A;  4D5U A;  4LSH A;  3PRN A;  3FYX A;  3AA1 B;  1QJP A;  3POQ A;  4E1S A;  5AFU K;  4KR8 A;  3QRC A;  1GFO A;  3AA1 A;  1MM5 A;  2YNK A;  3LK4 2;  2Y2X A;  4FZM A;  3VE2 A;  3VZT X;  4U9C A;  1ZHY A;  4O3Y A;  2KZ7 B;  3PQS A;  4QQ1 A;  1ZHT A;  3SZV A;  3T0S A;  2KZ7 A;  5EE2 A;  3VY9 X;  4RJW A;  1PRN A;  5DL8 A;  3G7G A;  1HXT A;  5DL5 A;  4AFK A;  7PRN A;  3KVD D;  3POU A;  2XE5 A;  1ZHW A;  3NSG A;  1P4T A;  3DA4 A;  2F1T A;  2OMF A;  4KR4 A;  2K0L A;  4N59 A;  4N58 A;  5FVN A;  2Y0K A;  1BXW A;  5JDP A;  3AA0 B;  1IZN B;  3LK2 B;  5ADX K;  2K4T A;  4O49 A;  2N2M A;  3AA0 A;  4RLB A;  4RL9 A;  1IZN A;  3EMN X;  3LK2 A;  3AA7 B;  3AAA B;  4JFB A;  4D64 A;  5DL7 A;  4KRA A;  2XG6 A;  3AA7 A;  3AAA A;  4PUX A;  2W81 C;  3SZD A;  4F4B A;  4FMS A;  4GCQ A;  4FSP A;  3K19 A;  4E1T A;  4FZN A;  4LSF A;  2J1N A;  4G75 A;  1HXU A;  4G76 A;  4AYI D;  2GE4 A;  2YPV A;  4AYE C;  6PRN A;  2J4U P;  4O3Z A;  2ERV A;  4XNL A;  4AUI A;  5AFU L;  4B61 A;  1ZHZ A;  3JTY A;  2MNH A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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