3QRC | Genus

Total Genus 40

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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	40
sequence length	157
structure length	153
Chain Sequence	MEGESSISIGYAQSRVKEDGYKLDKNPRGFNLKYRYEFNNDWGVIGSFAQTRRGFEESVLIDGDFKYYSVTAGPVFRINEYVSLYGLLGAGHGKAKFSSIFGQSESRSKTSLAYGAGLQFNPHPNFVIDASYEYSKLDDVKVGTWMLGAGYRF

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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Cell invasion
source organism	Yersinia pestis
publication title	Structural Insights into Ail-Mediated Adhesion in Yersinia pestis. pubmed doi rcsb
molecule keywords	Attachment invasion locus protein
total genus	40
structure length	153
sequence length	157
chains with identical sequence	B
ec nomenclature
pdb deposition date	2011-02-17

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
2.40.160.20	Mainly Beta	Beta Barrel	Porin	Porin	3qrcA00

2X27X 1G90A 2F1VA 1THQA 3QRAA 4RLCA 3QRCA 1Q9FA 3GP6A 1P4TA 2MNHA 2LHFA 2M07A 1ORMA 1MM5A 3G7GA 1Q9GA 2JMMA 1QJ8A 2N2MA 2N2LA 2ERVA 1QJ9A 1BXWA 1MM4A 2GE4A 2K0LA 3C5OA 2M06A 1QJPA 4PUXA 2MHLA 2F1TA
chains in the Genus database with same CATH superfamily

2X27X 3AA1A 1OPFA 3HOEA 3LK3A 2F1VA 2XE5A 4KRAA 4O4XA 3A2SX 2IWWA 3UPGA 1THQA 2FGQX 2XG6A 3LK42 3PORA 1GFMA 3QRAA 4N58A 1HXTA 2YPVA 5DL8A 4RLCA 5IYUA 4LSHA 4O49A 4F4BA 2R4PA 4N59A 1GFQA 4O3ZA 5PRNA 3GP6A 4FQEA 3RBHA 5H2FO 1OSMA 4UB8O 3VY8X 3O0EA 2LHFA 3HWBA 1BH3A 3PF1A 1MM5A 2R89A 2W80C 4FRTA 1QJ8A 3SYBA 4K3BA 2KXPA 3EMNX 4AKRB 3DWOX 5T5FA 3TZGA 4GCSA 3KVDD 4LSEA 2R88A 4GF4A 2KZ7B 2QTKA 3HOLA 3SZDA 3V8UA 4RJXA 2LFUA 4U9CA 5DL6A 3VZWX 7PRNA 2Y0LA 3K19A 4FMSA 5JDPA 4E1TA 3DA3A 2MHLA 3JTYA 4N75A 3AAEB 2JQYA 3AAAA 3PQSA 4K3CA 4BUMX 2AXTO 2R4OA 2Y2XA 3PGUA 1IZNA 1E54A 1HXUA 2F1CX 4N74A 4QQ1A 3SYSA 4D64A 4PJ0O 4AYEC 5GTHO 3AA7B 4IL6O 2Y0KA 4UB6O 2Y0HA 1ZHTA 4CTDA 3PQUA 4FRXA 1Q9FA 4AFKA 3VY9X 4FUVA 1P4TA 4Z3TA 2XTQA 4O3WA 5B66O 1PRNA 1ORMA 5ADXL 3VE2A 2XE3A 1Q9GA 2JMMA 2XMXA 4E1SA 2N2LA 2ERVA 4AYMC 1BXWA 5FVNA 1MPFA 3WI4A 3AA6B 2X9KA 4GCQA 5ADXK 3FYXA 4AZLA 3AA0A 3HW9A 3SZVA 4D65A 3NJTA 4D5UA 1HXXA 3AA1B 1BT9A 2KC0A 3LK3B 2M06A 2ZLDA 4G76A 4KR8A 4O3YA 3WI5A 4O4UA 3LK2B 2FGRA 4PUXA 3POQA 3VZTX 4AKMA 5B5EO 3POUA 4C4VA 4JCHA 4FT6A 5E79O 5AFUK 1GFPA 4FSPA 5EE2A 4AYID 4C4VB 5G38A 2O4VA 1GFOA 4GCPA 3PGRA 3SY9A 1ZHYA 3WU2O 2WJRA 8PRNA 3LK41 5TISO 3G7GA 4XNLA 2R4NA 2IWVA 2N2MA 1ZHXA 3SY7A 3PRNA 4FESA 4AYDC 2WVPA 5G3AA 4GHBA 4C00A 1MM4A 4PR7A 3BRYA 4FZMA 3AAAB 4LSIA 4FOZA 2W81C 2K0LA 3AA6A 3JCUO 4G75A 5KAFO 3T0SA 4AKRA 4AYNA 1QJPA 5KAIO 3DWNA 5AFUL 2ODJA 2KZ7A 4FZNA 2YNKA 5G39A 3DA4A 1G90A 2OMFA 3A0HO 2K4TA 3KZIO 3LK2A 4FSOA 4JFBA 4RL9A 4O3XB 2KDYA 3UAQA 3AAEA 4LSFA 5DL5A 1ZHWA 6PRNA 2J4UP 3DZMA 3UU2A 3QRCA 4AUIA 2XE2A 1PHOA 2Y7SA 3PGSA 2XE1A 2XTRA 5DL7A 5G26A 2MNHA 2R4LA 1GFNA 3AA7A 5GTIO 4C69X 2KXPB 3NSGA 3BRZA 3T24A 2R8AA 2M07A 4RLBA 5D5DA 3AA0B 4B61A 2PORA 1S5LO 1QJ9A 2J1NA 4RJWA 1T1LA 1YS5A 2PRNA 4KR4A 3VZUX 2GE4A 3POXA 1ZHZA 1T16A 3T20A 3A0BO 3C5OA 4XNKA 2ZFGA 4FZLA 1IZNB 3BS0A 5GV0A 3VE1A 2WJQA 2F1TA 1H6S1
chains in the Genus database with same CATH topology

2X27X 3AA1A 1OPFA 3HOEA 3LK3A 2F1VA 2XE5A 4KRAA 4O4XA 3A2SX 3UPGA 1THQA 2FGQX 2XG6A 3LK42 3PORA 1GFMA 3QRAA 4N58A 1HXTA 2YPVA 5DL8A 4RLCA 5IYUA 4LSHA 4F4BA 4N59A 1GFQA 4O3ZA 5PRNA 3GP6A 3RBHA 1OSMA 3VY8X 3O0EA 2LHFA 3HWBA 1BH3A 1MM5A 2W80C 4FRTA 1QJ8A 3SYBA 2KXPA 3EMNX 4AKRB 5T5FA 3TZGA 4GCSA 3KVDD 4LSEA 3SZDA 4GF4A 2KZ7B 2QTKA 3HOLA 3V8UA 3VZWX 4RJXA 2LFUA 4U9CA 5DL6A 7PRNA 2Y0LA 3K19A 4FMSA 5JDPA 4E1TA 3DA3A 2MHLA 3JTYA 3AAEB 3AAAA 3PQSA 4BUMX 4QQ1A 2Y2XA 4D64A 1IZNA 1E54A 1HXUA 3SYSA 4AYEC 3AA7B 2Y0KA 2Y0HA 1ZHTA 3PQUA 4FRXA 1Q9FA 4AFKA 3VY9X 4FUVA 1P4TA 4Z3TA 2XTQA 4O3WA 1PRNA 1ORMA 5ADXL 3VE2A 2XE3A 1Q9GA 2JMMA 2XMXA 4E1SA 2N2LA 2ERVA 4AYMC 1BXWA 5FVNA 1MPFA 3WI4A 3AA6B 4GCQA 5ADXK 3FYXA 4AZLA 3AA0A 3HW9A 3SZVA 4D65A 4D5UA 1HXXA 3AA1B 1BT9A 2KC0A 3LK3B 2M06A 2ZLDA 4G76A 4KR8A 4O3YA 3WI5A 4O4UA 3LK2B 2FGRA 4PUXA 3POQA 3VZTX 4AKMA 3POUA 4JCHA 4FT6A 5AFUK 1GFPA 4FSPA 5EE2A 4AYID 2O4VA 1GFOA 4GCPA 3SY9A 1ZHYA 8PRNA 3LK41 3G7GA 4XNLA 2N2MA 1ZHXA 3SY7A 3PRNA 4FESA 4AYDC 4GHBA 1MM4A 4FZMA 3AAAB 4LSIA 4FOZA 2W81C 2K0LA 3AA6A 4G75A 3T0SA 4AKRA 4AYNA 1QJPA 5AFUL 2ODJA 2KZ7A 4FZNA 2YNKA 3DA4A 1G90A 2OMFA 2K4TA 3LK2A 4FSOA 4JFBA 4RL9A 4O3XB 2KDYA 3UAQA 3AAEA 4LSFA 5DL5A 1ZHWA 6PRNA 2J4UP 3UU2A 3QRCA 4AUIA 2XE2A 1PHOA 2Y7SA 5DL7A 2XE1A 2XTRA 5G26A 2MNHA 3AA7A 1GFNA 4C69X 2KXPB 3NSGA 3T24A 2M07A 4RLBA 5D5DA 3AA0B 4B61A 2PORA 1QJ9A 2J1NA 4RJWA 1YS5A 2PRNA 4KR4A 3VZUX 2GE4A 3POXA 1ZHZA 3T20A 3C5OA 4XNKA 2ZFGA 4FZLA 1IZNB 5GV0A 3VE1A 4O49A 2F1TA 1H6S1
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 2X27 X;  1G90 A;  2F1V A;  1THQ A;  3QRA A;  4RLC A;  3QRC A;  1Q9F A;  3GP6 A;  1P4T A;  2MNH A;  2LHF A;  2M07 A;  1ORM A;  1MM5 A;  3G7G A;  1Q9G A;  2JMM A;  1QJ8 A;  2N2M A;  2N2L A;  2ERV A;  1QJ9 A;  1BXW A;  1MM4 A;  2GE4 A;  2K0L A;  3C5O A;  2M06 A;  1QJP A;  4PUX A;  2MHL A;  2F1T A; 
#chains in the Genus database with same CATH topology
 2X27 X;  3AA1 A;  1OPF A;  3HOE A;  3LK3 A;  2F1V A;  2XE5 A;  4KRA A;  4O4X A;  3A2S X;  2IWW A;  3UPG A;  1THQ A;  2FGQ X;  2XG6 A;  3LK4 2;  3POR A;  1GFM A;  3QRA A;  4N58 A;  1HXT A;  2YPV A;  5DL8 A;  4RLC A;  5IYU A;  4LSH A;  4O49 A;  4F4B A;  2R4P A;  4N59 A;  1GFQ A;  4O3Z A;  5PRN A;  3GP6 A;  4FQE A;  3RBH A;  5H2F O;  1OSM A;  4UB8 O;  3VY8 X;  3O0E A;  2LHF A;  3HWB A;  1BH3 A;  3PF1 A;  1MM5 A;  2R89 A;  2W80 C;  4FRT A;  1QJ8 A;  3SYB A;  4K3B A;  2KXP A;  3EMN X;  4AKR B;  3DWO X;  5T5F A;  3TZG A;  4GCS A;  3KVD D;  4LSE A;  2R88 A;  4GF4 A;  2KZ7 B;  2QTK A;  3HOL A;  3SZD A;  3V8U A;  4RJX A;  2LFU A;  4U9C A;  5DL6 A;  3VZW X;  7PRN A;  2Y0L A;  3K19 A;  4FMS A;  5JDP A;  4E1T A;  3DA3 A;  2MHL A;  3JTY A;  4N75 A;  3AAE B;  2JQY A;  3AAA A;  3PQS A;  4K3C A;  4BUM X;  2AXT O;  2R4O A;  2Y2X A;  3PGU A;  1IZN A;  1E54 A;  1HXU A;  2F1C X;  4N74 A;  4QQ1 A;  3SYS A;  4D64 A;  4PJ0 O;  4AYE C;  5GTH O;  3AA7 B;  4IL6 O;  2Y0K A;  4UB6 O;  2Y0H A;  1ZHT A;  4CTD A;  3PQU A;  4FRX A;  1Q9F A;  4AFK A;  3VY9 X;  4FUV A;  1P4T A;  4Z3T A;  2XTQ A;  4O3W A;  5B66 O;  1PRN A;  1ORM A;  5ADX L;  3VE2 A;  2XE3 A;  1Q9G A;  2JMM A;  2XMX A;  4E1S A;  2N2L A;  2ERV A;  4AYM C;  1BXW A;  5FVN A;  1MPF A;  3WI4 A;  3AA6 B;  2X9K A;  4GCQ A;  5ADX K;  3FYX A;  4AZL A;  3AA0 A;  3HW9 A;  3SZV A;  4D65 A;  3NJT A;  4D5U A;  1HXX A;  3AA1 B;  1BT9 A;  2KC0 A;  3LK3 B;  2M06 A;  2ZLD A;  4G76 A;  4KR8 A;  4O3Y A;  3WI5 A;  4O4U A;  3LK2 B;  2FGR A;  4PUX A;  3POQ A;  3VZT X;  4AKM A;  5B5E O;  3POU A;  4C4V A;  4JCH A;  4FT6 A;  5E79 O;  5AFU K;  1GFP A;  4FSP A;  5EE2 A;  4AYI D;  4C4V B;  5G38 A;  2O4V A;  1GFO A;  4GCP A;  3PGR A;  3SY9 A;  1ZHY A;  3WU2 O;  2WJR A;  8PRN A;  3LK4 1;  5TIS O;  3G7G A;  4XNL A;  2R4N A;  2IWV A;  2N2M A;  1ZHX A;  3SY7 A;  3PRN A;  4FES A;  4AYD C;  2WVP A;  5G3A A;  4GHB A;  4C00 A;  1MM4 A;  4PR7 A;  3BRY A;  4FZM A;  3AAA B;  4LSI A;  4FOZ A;  2W81 C;  2K0L A;  3AA6 A;  3JCU O;  4G75 A;  5KAF O;  3T0S A;  4AKR A;  4AYN A;  1QJP A;  5KAI O;  3DWN A;  5AFU L;  2ODJ A;  2KZ7 A;  4FZN A;  2YNK A;  5G39 A;  3DA4 A;  1G90 A;  2OMF A;  3A0H O;  2K4T A;  3KZI O;  3LK2 A;  4FSO A;  4JFB A;  4RL9 A;  4O3X B;  2KDY A;  3UAQ A;  3AAE A;  4LSF A;  5DL5 A;  1ZHW A;  6PRN A;  2J4U P;  3DZM A;  3UU2 A;  3QRC A;  4AUI A;  2XE2 A;  1PHO A;  2Y7S A;  3PGS A;  2XE1 A;  2XTR A;  5DL7 A;  5G26 A;  2MNH A;  2R4L A;  1GFN A;  3AA7 A;  5GTI O;  4C69 X;  2KXP B;  3NSG A;  3BRZ A;  3T24 A;  2R8A A;  2M07 A;  4RLB A;  5D5D A;  3AA0 B;  4B61 A;  2POR A;  1S5L O;  1QJ9 A;  2J1N A;  4RJW A;  1T1L A;  1YS5 A;  2PRN A;  4KR4 A;  3VZU X;  2GE4 A;  3POX A;  1ZHZ A;  1T16 A;  3T20 A;  3A0B O;  3C5O A;  4XNK A;  2ZFG A;  4FZL A;  1IZN B;  3BS0 A;  5GV0 A;  3VE1 A;  2WJQ A;  2F1T A;  1H6S 1; 
#chains in the Genus database with same CATH homology
 2X27 X;  3AA1 A;  1OPF A;  3HOE A;  3LK3 A;  2F1V A;  2XE5 A;  4KRA A;  4O4X A;  3A2S X;  3UPG A;  1THQ A;  2FGQ X;  2XG6 A;  3LK4 2;  3POR A;  1GFM A;  3QRA A;  4N58 A;  1HXT A;  2YPV A;  5DL8 A;  4RLC A;  5IYU A;  4LSH A;  4F4B A;  4N59 A;  1GFQ A;  4O3Z A;  5PRN A;  3GP6 A;  3RBH A;  1OSM A;  3VY8 X;  3O0E A;  2LHF A;  3HWB A;  1BH3 A;  1MM5 A;  2W80 C;  4FRT A;  1QJ8 A;  3SYB A;  2KXP A;  3EMN X;  4AKR B;  5T5F A;  3TZG A;  4GCS A;  3KVD D;  4LSE A;  3SZD A;  4GF4 A;  2KZ7 B;  2QTK A;  3HOL A;  3V8U A;  3VZW X;  4RJX A;  2LFU A;  4U9C A;  5DL6 A;  7PRN A;  2Y0L A;  3K19 A;  4FMS A;  5JDP A;  4E1T A;  3DA3 A;  2MHL A;  3JTY A;  3AAE B;  3AAA A;  3PQS A;  4BUM X;  4QQ1 A;  2Y2X A;  4D64 A;  1IZN A;  1E54 A;  1HXU A;  3SYS A;  4AYE C;  3AA7 B;  2Y0K A;  2Y0H A;  1ZHT A;  3PQU A;  4FRX A;  1Q9F A;  4AFK A;  3VY9 X;  4FUV A;  1P4T A;  4Z3T A;  2XTQ A;  4O3W A;  1PRN A;  1ORM A;  5ADX L;  3VE2 A;  2XE3 A;  1Q9G A;  2JMM A;  2XMX A;  4E1S A;  2N2L A;  2ERV A;  4AYM C;  1BXW A;  5FVN A;  1MPF A;  3WI4 A;  3AA6 B;  4GCQ A;  5ADX K;  3FYX A;  4AZL A;  3AA0 A;  3HW9 A;  3SZV A;  4D65 A;  4D5U A;  1HXX A;  3AA1 B;  1BT9 A;  2KC0 A;  3LK3 B;  2M06 A;  2ZLD A;  4G76 A;  4KR8 A;  4O3Y A;  3WI5 A;  4O4U A;  3LK2 B;  2FGR A;  4PUX A;  3POQ A;  3VZT X;  4AKM A;  3POU A;  4JCH A;  4FT6 A;  5AFU K;  1GFP A;  4FSP A;  5EE2 A;  4AYI D;  2O4V A;  1GFO A;  4GCP A;  3SY9 A;  1ZHY A;  8PRN A;  3LK4 1;  3G7G A;  4XNL A;  2N2M A;  1ZHX A;  3SY7 A;  3PRN A;  4FES A;  4AYD C;  4GHB A;  1MM4 A;  4FZM A;  3AAA B;  4LSI A;  4FOZ A;  2W81 C;  2K0L A;  3AA6 A;  4G75 A;  3T0S A;  4AKR A;  4AYN A;  1QJP A;  5AFU L;  2ODJ A;  2KZ7 A;  4FZN A;  2YNK A;  3DA4 A;  1G90 A;  2OMF A;  2K4T A;  3LK2 A;  4FSO A;  4JFB A;  4RL9 A;  4O3X B;  2KDY A;  3UAQ A;  3AAE A;  4LSF A;  5DL5 A;  1ZHW A;  6PRN A;  2J4U P;  3UU2 A;  3QRC A;  4AUI A;  2XE2 A;  1PHO A;  2Y7S A;  5DL7 A;  2XE1 A;  2XTR A;  5G26 A;  2MNH A;  3AA7 A;  1GFN A;  4C69 X;  2KXP B;  3NSG A;  3T24 A;  2M07 A;  4RLB A;  5D5D A;  3AA0 B;  4B61 A;  2POR A;  1QJ9 A;  2J1N A;  4RJW A;  1YS5 A;  2PRN A;  4KR4 A;  3VZU X;  2GE4 A;  3POX A;  1ZHZ A;  3T20 A;  3C5O A;  4XNK A;  2ZFG A;  4FZL A;  1IZN B;  5GV0 A;  3VE1 A;  4O49 A;  2F1T A;  1H6S 1;

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similar chains in the Genus database (?% sequence similarity)

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#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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3QRCA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN