1HF2A

Crystal structure of the bacterial cell-division inhibitor minc from t. maritima
Total Genus 57
204060801001201401601800102030405060
Genus TraceResidueGenus

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
57
sequence length
206
structure length
196
Chain Sequence
MVDFKMTKEGLVLLIKDYQNLEEVLNAISARITQMGGFFAKGDRISLMIENHNKHSQDIPRIVSHLRNLGLEVSQILVGKVQSRTTVESTGKVIKRNIRSGQTVVHSGDVIVFGNVNKGAEILAGGSVVVFGKAQGNIRAGLNEGGQAVVAALDLQTSLIQIAGFITHSKGEENVPSIAHVKGNRIVIEPFDKVSF

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH1 (21-35)S1 (2-7)TI1 (7-10)S2 (10-15)TIV2 (49-52)EMPTY3H2 (56-58)TIV1 (18-21)AH2 (59-68)TI2 (40-43)S4 (72-78)3H1 (52-54)TIV3 (78-91)TVIII1 (101-104)TII1 (109-112)TIV4 (79-92)S5 (93-97)O1 (97-99)S7 (112-116)S8 (120-122)S6 (103-104)TI3 (127-130)S14 (175-177)TIV7 (151-154)TI4 (155-158)TII'2 (172-175)S13 (169-172)TIV8 (152-155)TVIII3 (167-170)S12 (159-165)S15 (187-192)TIV9 (182-185)S16 (195-200)TIV10 (191-194)TII'1 (35-38)TIV5 (134-137)S10 (138-144)S11 (147-150)S9 (131-134)S3 (44-49)Updating...
connected with : NaN
molecule tags Cell division protein
source organism Thermotoga maritima
publication title Crystal Structure of the Bacterial Cell-Division Inhibitor Minc
pubmed doi rcsb
molecule keywords SEPTUM SITE-DETERMINING PROTEIN MINC
total genus 57
structure length 196
sequence length 206
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2000-11-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03775 MinC_C Septum formation inhibitor MinC, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.160.20.70 Mainly Beta 3 Solenoid Pectate Lyase C-like Pectate Lyase C-like 1hf2A02
3.30.750.50 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA Cell-division inhibitor MinC, N-terminal domain 1hf2A01
2YUHA 1HF2A 1K4ZA 3BH6B 2BX6A 1K8FA 4V02C 3BH7B 2B0RA 1KQ5A
chains in the Genus database with same CATH superfamily
1EZGA 1XG2A 4XLFA 4GHNA 1DBOA 2X6XA 1HF2A 3ML3A 4OJ6A 1K32A 3GQ9A 3D03A 4AEJA 2VBEA 1FC9A 2J8KA 1TYUA 1H80A 3PSZA 1LM1A 3B90A 4L8KA 3EQOA 4NK8A 4YELA 1FC6A 3GK7A 2NTQA 1QA2A 4OJOA 3GVLA 4MXNA 1RMGA 1H4YA 2INUA 1K5CA 4AVZA 2BX6A 1CZFA 2QXZA 2PYGA 4OZYA 1O8MA 4YC5A 3IHBA 3GRHA 1O8LA 2NZMA 1TYVA 2VFOA 1KCDA 4U49A 2IOUG 4OJLA 3F43A 1H4ZA 3T9GA 4DGFA 1THNB 2O0WA 2G0YA 2VBKA 4AE2A 1O8KA 3NAWA 4C2LA 3V8VA 1K8FA 2X85A 4XLHA 4XLAA 2VJJA 3FY3A 1LLWA 1QRCA 1J7XA 1BHEA 2QY1A 3OIRA 5EZBA 2B0RA 1O8FA 1QA3A 3IH9A 2W7ZA 1FCFA 4OJ5A 2X6WA 4XOTA 3VSUA 3GVKA 1N6FA 4YDTA 3GQAA 3OIZA 2INVA 2QZAA 3BH6B 1TH8B 4KH3A 3T6OA 5C1EA 3MGLA 5EUSA 3ZTBA 3GQ8A 3D3UA 5EUZA 1OFDA 1KCCA 1WMRA 2ODLA 2QX3A 2PECA 1K4ZA 4OJPA 2V5IA 3GVJA 2CWWA 3QDQA 3AK5A 1O8IA 2RRLA 3JX8A 4YEIA 3NB2A 2UVFA 2O04A 4XOPA 4XLEA 4XM3A 4XL9A 2AS0A 1IDKA 1DBGA 4PMHA 2OASA 4OPWA 1KTWA 2J8IA 2NTBA 2KLNA 4Z06A 4HIZA 3EH7A 1N6DA 1LLZA 3TH0A 3B8YA 3LJYA 2BSPA 2Z8GA 4DMGA 2XTYA 2O6WA 2DXNA 1BPLA 3BH7B 3LMWA 1X0CA 5EUXA 2BM4A 4EW9A 4XMYA 1QRBA 3VMVA 1V0EA 2O0VA 3NY7A 3VSEA 3JURA 1PXZA 3SUCA 4YCQA 3PETA 4XORA 1CLWA 1VBLA 4NK6A 2VJIA 1WXWA 1IA5A 1AUZA 4W8SA 1O88A 2IQ7A 4QTPA 1O8HA 1H4XA 1TYWA 3N6ZA 1OFLA 1EE6A 1OFMA 1OFEA 3VMWA 2BM5A 1L1IA 2XTXA 2BM7A 3C0KA 3DUPA 2F3LA 3DJAA 1V0FA 3SYJA 2VBMA 1T6RA 4YZXA 3B4NA 1JTAA 2YUHA 5JMCB 4YFOA 1PE9A 1BN8A 1N6EA 1O8JA 4HYLA 1AIRA 4W8TA 3ZXNA 3IH8A 2VY9A 5EUUA 1PLUA 1HG8A 2XT4A 4XN3A 1O8GA 3IF5A 4OM9A 4XS5A 3LYCA 2VFMA 3IHAA 1WXRA 4W8QA 1IB4A 2NTPA 3EQNA 4W8RA 1QCXA 4DGHA 5AMVA 2XTWA 1TIDB 1OOCA 3DORA 3K50A 1SBOA 2UVEA 3H09A 4I84A 2NT9A 4YZ0A 3KRGA 2VFQA 3N90A 4MR0A 5EUWA 2X3HA 2NSTA 2XT2A 3JU4A 4U4BA 4YZAA 4JC0A 1GQ8A 2KA5A 1RU4A 2ZO9B 2NT6A 1WXXA 2B78A 4YEJA 3LLOA 3GHFA 1TILB 4Z03A 3ZSCA 3SQVA 1O8EA 4L1CA 4YZQA 1DABA 4XLCA 4V02C 3PSSA 4HWVA 5JLVC 4XKVA 4XONA 4Z05A 1IDJA 4XN0A 1QJVA 4XR6A 3DU1X 3ZPPA 5DNSA 3GQ7A 2NSPA 2BM6A 2VFNA 1KQ5A 3SZEA 3RIQA 2X6YA 3WWGA 3MOGA 1JRGA 3V97A 4OZZA 2EWEA 3VSTA 1FC7A 3UW0A 4XQFA 4XKWA 2O17A 3LKLA 4JRAC 1EA0A 3P4GA 2DXLA 3GMFA 1QQ1A 1BUZA 2ZOAA 1OGOX 3AGEA 1O8DA 3VSVA 1TYXA 4XNFA 2QYUA 3SY2A 2O1DA 2PYHA 1NHCA 1OGMX 4URRA 2VFPA 1RWRA 2XC1A 5C1CA 3AGDA 1VC1A 1TSPA 3LDFA 1QA1A
chains in the Genus database with same CATH topology
2BM4A 1QQ1A 1K4ZA 4OJPA 2B0RA 1TYWA 2BM6A 2VFNA 1KQ5A 3H09A 1TYXA 3N6ZA 4OPWA 1QRBA 2J8IA 4OM9A 2YUHA 3RIQA 3SZEA 4OJOA 5JMCB 1QA2A 1HF2A 3LYCA 2G0YA 2V5IA 2VFQA 1QA3A 2VFMA 2W7ZA 1WXRA 3N90A 3ML3A 3PETA 3AK5A 1DABA 3TH0A 4OJ6A 4OJ5A 2BX6A 1K8FA 3JX8A 2VFPA 3LJYA 4V02C 2BM5A 2BM7A 1TYVA 2F3LA 2VFOA 1CLWA 2XC1A 4JRAC 5JLVC 3BH6B 1TSPA 4KH3A 1QRCA 1QA1A 1TYUA 2IOUG 3BH7B 3P4GA 4OJLA 3SYJA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2YUH A;  1HF2 A;  1K4Z A;  3BH6 B;  2BX6 A;  1K8F A;  4V02 C;  3BH7 B;  2B0R A;  1KQ5 A; 
#chains in the Genus database with same CATH topology
 1EZG A;  1XG2 A;  4XLF A;  4GHN A;  1DBO A;  2X6X A;  1HF2 A;  3ML3 A;  4OJ6 A;  1K32 A;  3GQ9 A;  3D03 A;  4AEJ A;  2VBE A;  1FC9 A;  2J8K A;  1TYU A;  1H80 A;  3PSZ A;  1LM1 A;  3B90 A;  4L8K A;  3EQO A;  4NK8 A;  4YEL A;  1FC6 A;  3GK7 A;  2NTQ A;  1QA2 A;  4OJO A;  3GVL A;  4MXN A;  1RMG A;  1H4Y A;  2INU A;  1K5C A;  4AVZ A;  2BX6 A;  1CZF A;  2QXZ A;  2PYG A;  4OZY A;  1O8M A;  4YC5 A;  3IHB A;  3GRH A;  1O8L A;  2NZM A;  1TYV A;  2VFO A;  1KCD A;  4U49 A;  2IOU G;  4OJL A;  3F43 A;  1H4Z A;  3T9G A;  4DGF A;  1THN B;  2O0W A;  2G0Y A;  2VBK A;  4AE2 A;  1O8K A;  3NAW A;  4C2L A;  3V8V A;  1K8F A;  2X85 A;  4XLH A;  4XLA A;  2VJJ A;  3FY3 A;  1LLW A;  1QRC A;  1J7X A;  1BHE A;  2QY1 A;  3OIR A;  5EZB A;  2B0R A;  1O8F A;  1QA3 A;  3IH9 A;  2W7Z A;  1FCF A;  4OJ5 A;  2X6W A;  4XOT A;  3VSU A;  3GVK A;  1N6F A;  4YDT A;  3GQA A;  3OIZ A;  2INV A;  2QZA A;  3BH6 B;  1TH8 B;  4KH3 A;  3T6O A;  5C1E A;  3MGL A;  5EUS A;  3ZTB A;  3GQ8 A;  3D3U A;  5EUZ A;  1OFD A;  1KCC A;  1WMR A;  2ODL A;  2QX3 A;  2PEC A;  1K4Z A;  4OJP A;  2V5I A;  3GVJ A;  2CWW A;  3QDQ A;  3AK5 A;  1O8I A;  2RRL A;  3JX8 A;  4YEI A;  3NB2 A;  2UVF A;  2O04 A;  4XOP A;  4XLE A;  4XM3 A;  4XL9 A;  2AS0 A;  1IDK A;  1DBG A;  4PMH A;  2OAS A;  4OPW A;  1KTW A;  2J8I A;  2NTB A;  2KLN A;  4Z06 A;  4HIZ A;  3EH7 A;  1N6D A;  1LLZ A;  3TH0 A;  3B8Y A;  3LJY A;  2BSP A;  2Z8G A;  4DMG A;  2XTY A;  2O6W A;  2DXN A;  1BPL A;  3BH7 B;  3LMW A;  1X0C A;  5EUX A;  2BM4 A;  4EW9 A;  4XMY A;  1QRB A;  3VMV A;  1V0E A;  2O0V A;  3NY7 A;  3VSE A;  3JUR A;  1PXZ A;  3SUC A;  4YCQ A;  3PET A;  4XOR A;  1CLW A;  1VBL A;  4NK6 A;  2VJI A;  1WXW A;  1IA5 A;  1AUZ A;  4W8S A;  1O88 A;  2IQ7 A;  4QTP A;  1O8H A;  1H4X A;  1TYW A;  3N6Z A;  1OFL A;  1EE6 A;  1OFM A;  1OFE A;  3VMW A;  2BM5 A;  1L1I A;  2XTX A;  2BM7 A;  3C0K A;  3DUP A;  2F3L A;  3DJA A;  1V0F A;  3SYJ A;  2VBM A;  1T6R A;  4YZX A;  3B4N A;  1JTA A;  2YUH A;  5JMC B;  4YFO A;  1PE9 A;  1BN8 A;  1N6E A;  1O8J A;  4HYL A;  1AIR A;  4W8T A;  3ZXN A;  3IH8 A;  2VY9 A;  5EUU A;  1PLU A;  1HG8 A;  2XT4 A;  4XN3 A;  1O8G A;  3IF5 A;  4OM9 A;  4XS5 A;  3LYC A;  2VFM A;  3IHA A;  1WXR A;  4W8Q A;  1IB4 A;  2NTP A;  3EQN A;  4W8R A;  1QCX A;  4DGH A;  5AMV A;  2XTW A;  1TID B;  1OOC A;  3DOR A;  3K50 A;  1SBO A;  2UVE A;  3H09 A;  4I84 A;  2NT9 A;  4YZ0 A;  3KRG A;  2VFQ A;  3N90 A;  4MR0 A;  5EUW A;  2X3H A;  2NST A;  2XT2 A;  3JU4 A;  4U4B A;  4YZA A;  4JC0 A;  1GQ8 A;  2KA5 A;  1RU4 A;  2ZO9 B;  2NT6 A;  1WXX A;  2B78 A;  4YEJ A;  3LLO A;  3GHF A;  1TIL B;  4Z03 A;  3ZSC A;  3SQV A;  1O8E A;  4L1C A;  4YZQ A;  1DAB A;  4XLC A;  4V02 C;  3PSS A;  4HWV A;  5JLV C;  4XKV A;  4XON A;  4Z05 A;  1IDJ A;  4XN0 A;  1QJV A;  4XR6 A;  3DU1 X;  3ZPP A;  5DNS A;  3GQ7 A;  2NSP A;  2BM6 A;  2VFN A;  1KQ5 A;  3SZE A;  3RIQ A;  2X6Y A;  3WWG A;  3MOG A;  1JRG A;  3V97 A;  4OZZ A;  2EWE A;  3VST A;  1FC7 A;  3UW0 A;  4XQF A;  4XKW A;  2O17 A;  3LKL A;  4JRA C;  1EA0 A;  3P4G A;  2DXL A;  3GMF A;  1QQ1 A;  1BUZ A;  2ZOA A;  1OGO X;  3AGE A;  1O8D A;  3VSV A;  1TYX A;  4XNF A;  2QYU A;  3SY2 A;  2O1D A;  2PYH A;  1NHC A;  1OGM X;  4URR A;  2VFP A;  1RWR A;  2XC1 A;  5C1C A;  3AGD A;  1VC1 A;  1TSP A;  3LDF A;  1QA1 A; 
#chains in the Genus database with same CATH homology
 2BM4 A;  1QQ1 A;  1K4Z A;  4OJP A;  2B0R A;  1TYW A;  2BM6 A;  2VFN A;  1KQ5 A;  3H09 A;  1TYX A;  3N6Z A;  4OPW A;  1QRB A;  2J8I A;  4OM9 A;  2YUH A;  3RIQ A;  3SZE A;  4OJO A;  5JMC B;  1QA2 A;  1HF2 A;  3LYC A;  2G0Y A;  2V5I A;  2VFQ A;  1QA3 A;  2VFM A;  2W7Z A;  1WXR A;  3N90 A;  3ML3 A;  3PET A;  3AK5 A;  1DAB A;  3TH0 A;  4OJ6 A;  4OJ5 A;  2BX6 A;  1K8F A;  3JX8 A;  2VFP A;  3LJY A;  4V02 C;  2BM5 A;  2BM7 A;  1TYV A;  2F3L A;  2VFO A;  1CLW A;  2XC1 A;  4JRA C;  5JLV C;  3BH6 B;  1TSP A;  4KH3 A;  1QRC A;  1QA1 A;  1TYU A;  2IOU G;  3BH7 B;  3P4G A;  4OJL A;  3SYJ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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