2VDF | Genus

Total Genus 55

Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	55
sequence length	247
structure length	225
Chain Sequence	ANEFTVHTDLSSISSTRAFLKEKHKAAKHIGVRADIPFDANQGIRLEAGFGRSKKNIINLETDENKLGKTKNVKLPTGVPENRIDLYTGYTYTQTLSDSLNFRVGAGLGFESSKDSILHSSRQSWLAKVHADLLSQLGNGWYINPWSEVKFDLNSRYKLNTDINQKTNGWGFGLGANIGKKLGASIEAGPFYKQRTYKESGEFSVSLTIPKTSIREYGLRVGIKF

Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

loadScript /static/js/j2s/core/package.js

loadScript /static/js/j2s/core/corejmol.z.js

loadScript /static/js/j2s/core/corescript.z.js

JSmol exec jmolApplet0 start applet null

Jmol JavaScript applet jmolApplet0__675366898694532__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__675366898694532__)

vwrOptions:

{ "name":"jmolApplet0","applet":true,"documentBase":"https://genus.fuw.edu.pl/view/2VDF/A/","platform":"J.awtjs2d.Platform","fullName":"jmolApplet0__675366898694532__","codePath":"https:/static/js/j2s/","display":"jmolApplet0_canvas2d","signedApplet":"true","appletReadyCallback":"Jmol._readyCallback","statusListener":"[J.appletjs.Jmol object]","syncId":"675366898694532","bgcolor":"white" }

setting document base to "https://genus.fuw.edu.pl/view/2VDF/A/"

Jmol Version: 14.29.13 2018-04-17 17:17

java.vendor: Java2Script (HTML5)

java.version: 2018-01-28 23:38:52 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

Access: ALL

memory: 0.0/0.0

processors available: 1

useCommandThread: false

appletId:jmolApplet0 (signed)

Jmol getValue emulate null

defaults = "Jmol"

Jmol getValue boxbgcolor null

Jmol getValue bgcolor white

backgroundColor = "white"

Jmol getValue ANIMFRAMECallback null

Jmol getValue APPLETREADYCallback Jmol._readyCallback

APPLETREADYCallback = "Jmol._readyCallback"

callback set for APPLETREADYCallback Jmol._readyCallback APPLETREADY

Jmol getValue ATOMMOVEDCallback null

Jmol getValue AUDIOCallback null

Jmol getValue CLICKCallback null

Jmol getValue DRAGDROPCallback null

Jmol getValue ECHOCallback null

Jmol getValue ERRORCallback null

Jmol getValue EVALCallback null

Jmol getValue HOVERCallback null

Jmol getValue IMAGECallback null

Jmol getValue LOADSTRUCTCallback null

Jmol getValue MEASURECallback null

Jmol getValue MESSAGECallback null

Jmol getValue MINIMIZATIONCallback null

Jmol getValue SERVICECallback null

Jmol getValue PICKCallback null

Jmol getValue RESIZECallback null

Jmol getValue SCRIPTCallback null

Jmol getValue SYNCCallback null

Jmol getValue STRUCTUREMODIFIEDCallback null

Jmol getValue doTranslate null

language=en_US

Jmol getValue popupMenu null

Jmol getValue script null

Jmol getValue loadInline null

Jmol getValue load null

Jmol applet jmolApplet0__675366898694532__ ready

script 1 started

platformSpeed = 8

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Membrane protein
source organism	Neisseria meningitidis
publication title	In Meso Crystal Structure and Docking Simulations Suggest an Alternative Proteoglycan Binding Site in the Opca Outer Membrane Adhesin. pubmed doi rcsb
molecule keywords	OUTER MEMBRANE PROTEIN
total genus	55
structure length	225
sequence length	247
ec nomenclature
pdb deposition date	2007-10-05

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF07239	OpcA	Outer membrane protein OpcA

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
2.40.128.100	Mainly Beta	Beta Barrel	Lipocalin	OPCA outer membrane adhesin/invasin	2vdfA00

2VDFA 1K24A
chains in the Genus database with same CATH superfamily

2IZKA 3FA9A 2RTNB 1JMXA 3RDSA 5HCEC 1AVDA 4O4OA 1JV4A 4YGGA 2WQAE 4YDAA 3ZWEA 1SXUA 5HTDA 2RQ0A 1X71A 2IZHB 2HZRA 1X8OA 2RTHB 3BX7A 4JHQA 1R0UA 2JN3A 1VWHB 5HZQA 1ACDA 4BX7B 1SREA 2IZBA 2RTDB 1K24A 3ZW1A 4PJ2A 1EW3A 5H9KA 4Y59A 4ZFXA 2A2GA 5D45A 1UREA 4TLJA 1LUQA 1JJUA 1EXSA 1RSUB 3D4RA 4HFOA 1NDJA 3D95A 4GNWA 1IFCA 2CBSA 1T0VA 4YVBA 1QWDA 5CSEA 4YBPA 1EPAA 1SLEB 3PECA 1ICNA 4OMXA 1EALA 1VWCB 4U3QA 4I60A 4GGZA 1MM9A 2NP1A 1VWRB 2F01A 2RTAA 4KC8A 5K06A 3UEVA 4CPHA 1HMTA 4MVIA 2X4MA 1SLDB 3CMPA 2X55A 3Q6LA 3HWFA 4FQBB 4M7MA 4HWMA 1Y0GA 1KFFA 3FELA 2POAA 3C78X 1LIBA 1VWOB 4GGTA 1BSQA 4ORXA 3HOLA 5BVTA 3FMZA 5HCCC 4LZUA 3KQ0A 2ACPX 3MM0A 3D9WA 5BVSA 4DNEA 2Y3FA 3WJFA 3SLTA 3D96A 1JBHA 4A1HA 2CBRA 3TGAA 3VU1A 4GNYA 4MVLA 3VE2A 1DF8A 1Y9LA 2A0AA 1MX7A 3WZNA 5HZ5A 4DQ4A 5HCDC 1D2UA 1EIIA 4IABA 1KL5A 5B3MO 5LJGA 2OY1O 1N7YA 2OL7A 1RSTB 1LIFA 1STRB 3FR4A 2BT9A 4NV8A 4U9CA 2I5ZO 1HN2A 2G78A 1IFBA 4NYQA 1U17A 4ZHGA 1BWYA 2G79A 3HK1A 4I6SA 4YDBA 4ML7B 4AZRA 4QGXA 3WYQA 3ELZA 1SWUA 2AVIA 1DZMA 2FKGA 2MO5A 2UZ2A 1QFTA 1KT7A 3UEUA 3VG6A 1MEPA 1SXYA 4GD9A 2BLGA 4Y0RA 3MBTA 1VWNB 5B29A 5FFHA 3S5XA 1Y55X 2P8GA 2YG2A 1QG5A 1QQSA 4BOEA 4TKJA 5FAZA 2RTKA 4KC7A 3ZUOA 5HWZA 2YMSA 4OMWA 4ALOA 1QY0A 2QM9A 4QNIA 2OL6O 1X8UA 3B2JA 1SWNA 1YP7A 3B2IA 3WZOA 3NX2A 1EPBA 2OY5O 3FW4A 1CRBA 3HTYA 4TKHA 1A3YA 4YCHA 3KFGA 2OFAA 3I17A 1A2DA 2FS6A 2Q4NA 3FIQA 3LV4A 2RD7C 4CDEA 3P6EA 3FR2A 3EBWA 4BX7A 1JYDA 2Q9SA 2QO4A 1OBQA 2M4LA 1Z24A 1O1UA 3RDUA 3AKNA 2W2BA 4EKVA 1KQWA 4ORYA 1JIWI 3RSWA 3NX1A 1ERBA 5F6BA 3UAQA 1X8PA 5H8TA 5HZ9A 3TGBA 2G8CO 5BYPA 1A18A 2X56A 1IKJA 1FJ1E 2AT5X 1UYNX 4INNA 4O49A 2C4IA 4O4UA 2DJFA 2JU3A 4WBKA 5L8NA 1HMSA 1U0XA 1GX9A 2FKJA 3RKGA 5F2BA 2G5LA 4YH0A 1PEEA 2CM9A 3MX7A 3CQNA 1MVGA 4O4XA 4AZOA 1LKEA 2A13A 1W5RA 2ALLX 4KT5A 2WUTA 2XKLA 2A5CA 4Y0PA 4YFPA 5F1EA 3HOEA 3NQ3A 1SWFA 1LFOA 1CBRA 2JU7A 4EXZA 3CKFA 5AQ6A 2CZUA 1ZNLA 2IZIA 1WUBA 2IZAA 3TF6A 4K19A 4BQUA 1RXKA 1NP4A 3EYCA 4Z28A 3TGCA 1EIOA 2IZJA 1RBPA 1RXJA 2WEWA 1STSB 3V8UA 1X8NA 3BY0A 3C76X 2LBVA 4Z27A 1SWKA 3S60A 3WZQA 4MISA 2OY7A 2KTSA 1GX3A 1WBIA 4I3DA 1VYGA 3IFBA 3S5VA 5D4AA 3FW5A 3VHHA 4CPFA 4TKBA 1NGLA 3P02A 4GJVA 5IO7A 3C77X 5LJEA 4QYPA 4R0BA 1KT5A 3NPOA 1TXLA 3F8AA 3WJEA 4Z2PA 1QFVA 2OL8O 1NQMA 1OEEA 2IZEB 3P6HA 3VPJE 1SY2A 4GKCA 1OEJA 1PTSA 4O4SA 4RUUA 5LJCA 4MVEA 4QZTA 1H91A 2FHNX 3FR5A 4N7CA 2Q2PA 3GAQA 4WFUA 5JD2A 1LCWA 2OYBO 5IO6A 1FDQA 4GRJA 5B11O 3ZZVA 1YUPA 1FTPA 1SRGA 4NYRA 1HXZA 1X8QA 5HA0A 4A1YA 2JW1A 2Y3EA 4ODDA 3CR6A 4LKTA 4FBRA 1XKIA 5DG4A 2FR2A 2AMMX 1VWGB 3FLLA 4A8ZA 5IRWA 3AUMO 3P6CA 1E2TA 1OBPA 4GUZA 3ZW0B 4GU8A 1B56A 2HNXA 1JYJA 1S2PA 4QRLA 3I0AA 1PBOA 4OS3A 5C0NA 3STKA 1DZKA 2QO5A 1DC9A 1S7DA 1SRIA 2C1QA 1KOIA 2A2UA 3P6FA 3H3IA 1S44A 1CBQA 5HZ6A 4EEJA 4IB6A 1VWKB 2FTBA 3WOVA 4AW8A 3U9PC 2BS5A 2GTFX 2Z4IA 5KIDA 5KHPA 3APXA 3NR3A 1ZRYA 4I95A 3U03A 2OVDA 4XMCA 1K3BA 1UZ2X 4ORSA 2I5VO 5AJCA 5D47A 5L8IA 5HAEA 1Y9TA 1I78A 1GGLA 3RBYA 1LICA 1FELA 1I06A 1I4UA 1FE3A 2E4JA 1SWTA 4EQAC 1JJXA 1EUOA 4AZQA 1KL3A 3APUA 4GJSA 4D6AA 1BEBA 5LKEA 2W2FA 3CBSA 4ORRA 4LZVA 1SY0A 4HPDA 3FENA 1VWEB 4EDEA 1BRPA 2RCTA 5D48A 5K67A 1VWBB 5LJDA 4NLJA 3BLGA 1W4TA 2N93A 2OFBA 3T2WA 1EI5A 2BHVA 2RTRB 2FWVA 2VDFA 1NC9A 3WJGA 1BM5A 2RN4A 5EZ2A 1GXAA 3VG7A 2GTLN 4DCBA 4COTA 1BLRA 4AZMA 1HQPA 3APWA 4MVKA 5IXGA 2OVEA 1SWOA 2OF8A 4UU3A 4N7DA 4CPIA 3FA7A 2ACOA 4LQZA 4YBUA 1TOWA 1VWPB 2O62A 3B2HA 2AT3X 3HWEA 4FBOA 2JU8A 3X00A 1LDQA 2A5BA 4BBOA 1KZXA 3QKGA 4CPEA 2A8GA 3OBLA 3SZHA 1O8VA 2BS6A 1E5PA 2CAMA 2Q2MA 3CWKA 1VWJB 2KD2A 3WXQA 3VG2A 1OPBA 4ZGFA 4JGLA 1B8EA 1I04A 2RA6A 1GX8A 1LF7A 3PQSA 1BSOA 2L5PA 4RUNA 2MWHA 3KFHA 4ZCBA 3PH5A 2GTLO 2JGSA 1MX8A 1D3SA 2HLVA 2QCBA 4Y0SA 1SA8A 4GDZA 3P6DA 4ON1A 3FA6A 1LDOA 3JSQA 4IMNA 5AJBA 3RDOA 4OS8A 4CDFA 5L3YA 3FIDA 1B0OA 2X32A 3ZW0A 1DZPA 1T68X 2K62A 3O19A 5F6ZA 2IFBA 5F58A 3DSZA 3PH6A 1G5WA 3APVA 1SWCA 5CE4A 3B2KA 1MDCA 1TW4A 1DF3A 3BX8A 3FEKA 3P24A 5EDBA 1YWDA 4UU2A 3VHIA 1SWBA 4XMEA 1CJ5A 3DTQA 2BSZA 4AZNA 1SWRA 1AELA 1TVQA 3PQUA 1VYFA 4IB7A 1YWBA 1DZJA 1YWAA 2ANSA 2NNDA 2F09A 3JS1A 4XMFA 4EFGA 1GT3A 5LKFA 1VWAB 2WSJA 3T2XA 1AVGI 4YGZA 4NLIA 2GC9A 4GETA 4WFVA 5EPQA 2QO6A 2JMBA 1SWEA 4M6SA 4O3YA 4ZH6A 1PMPA 3RWXA 2KTDA 5F7GA 1G7NA 3EW1A 2R56A 1L6MA 4QQ1A 3KZAA 3E3CA 4NW4A 5CYBA 4QYNA 1UYOX 2OZQA 4QGWA 4ZGUA 5D8JA 3RZYA 1SWDA 4LKPA 4BGFA 3T6FA 1VWIB 1SWLA 2FR3A 1HBPA 2RTLA 1SRFA 2WQ9A 3BRNA 1QY2A 2FHLA 2RTOB 1G85A 2L9CA 3NP1A 3SLJA 5EEDA 2FRSA 4OS0A 1ICMA 3LHNA 1SRHA 2AF5A 1JJJA 2KT4B 1VWLB 2AKQA 2RCQA 2ZAIA 3BU1A 2PY1A 4GE1A 4D6BA 1HXLA 1SXXA 5FQ8E 2OF9A 1QABE 3EC5A 1SY3A 4KH8A 4I3BA 4YKMA 3ZW2A 2X8SA 4BVMA 5LJBA 1KZWA 1Y52X 1YP6A 5B10O 3ZUIA 3LTWA 2IZDB 1SWJA 1LELA 2FGSA 3U0DA 1STPA 1VPRA 1MOYA 4ORUA 2AL0X 2X46A 3NBXX 4IRWA 4B55A 4MEEA 1KT3A 3HWDA 4XMDA 3WVMA 3K3LA 4A60A 4Z2VA 5HZ8A 2HMBA 3HPEA 4O9SA 4FBVA 4Z6JA 5KICA 1CBIA 1IJ8A 3OD9A 5IRAA 1IIUA 1VYOA 1OPAA 1GT4A 1X89A 2FLJA 4NNTA 4Y5DA 5B2AO 1HY2A 4GK9A 1KT6A 5B5GA 1SLGB 3HWGA 1DV9A 2IZLB 2GTLM 1OSPO 4CSBA 3NADA 3GE2A 2LKKA 3KFIA 1P6PA 4CV7A 2FS7A 3VG5A 1FEMA 1T8VA 2CZTA 1MK5A 4FGIB 1IKEA 2AH7X 5JR8A 5L8OA 3F9DA 3FEPA 1GT1A 5LJHA 2RTEB 2ASNX 2R73A 2EU7X 4PSQA 2BC3A 1XCAA 3JQOA 4BX6B 1N43A 2OVAA 3WYPA 1CBSA 1SWPA 5HTEA 1AVEA 1N9YA 4IB9A 4JO6A 3FA8A 4BJ8A 1BRQA 1ZNKA 1VWFB 3RE6A 2OFRX 4QZUA 3RDQA 1ZNHA 2JOZA 2UYWA 5IRUA 3UEXA 4I9RA 2VFCA 1IW2A 2RTPB 3PEDA 5FQ6E 3STMX 4CK4A 3WJDA 4U8UN 3CBCA 4DQ3A 3CKGA 1FENA 3F6ZB 3FDCA 3IA8A 5DPQA 1SWAA 3WJCA 2IZCB 2AT0X 1ADLA 4BX5B 1GKAB 1HMRA 1E06A 2HKDA 2MF6A 3G7XA 2PI3O 4QAEA 2QOSC 3VGWA 4IBAA 4BCSA 4YFQA 1HBQA 1KL4A 1LNMA 1W6FA 1MUPA 2WWPA 4ZH9A 2QMIA 3OJYC 1U18A 3ZI8A 4C5PA 1LCZA 1DFVA 3B2LA 3NQKA 4NNSA 3SZJA 4OELA 4YMYA 1SMPI 1VWQB 4L3RA 1ZNGA 4IMOA 3VG3A 3VG4A 4I3CA 1PM1X 3UEWA 1LIDA 4ZHFA 3NQ9A 2QOMA 2VFBA 1SWQA 1SWGA 2RTGB 2WEXA 4O3WA 4TJZA 4MIRA 4U8UO 2FT9A 4Y0QA 1AB0A 4IAWA 1PBYA 1Y53X 2LA7A 3N91A 5H9LA 4TQ2A 2RTFB 1GM6A 1N9MA 2LFOA 3ELXA 4WHIA 4O3ZA 3SOTA 5B5FA 1RXHA 3AEHA 4YFRA 4O3XB 3WZPA 4JNJA 4AYHA 5IO5A 4GZVA 2IZGB 4ZHDA 3L4RA 2W2AA 1SLFB 1BSYA 4U46A 5B27A 1YWCA 4ALBA 4AZPA 4ZR2A 1ALBA 4ZJ0A 1ZNEA 1LIEA 3EW2A 2Y32A 2MHDA 2X45A 3SAOA 3AKMA 4IAXA 4L1NA 1OBUA 2LB6A 2RTIB 4TNNA 2ZAGA 1JQPA 3FYFA 1E00A 1SXWA 1SRJA 3PPTA 5H9AA 1A57A 4IB8A 3RE5A 2MM3A 2RTCB 2WPUA 2Z4HA 5AEOA 4I9SA 4YCEA 3VHMA 2L67A 4BX6A 1I9HA 2HZQA 3TZSA 3STNA 3BU9A 2MJIA 3EBKA 3SLOA 2X34A 4OKAA 2GJ5A 1O1VA 1BBPA 3PP6A 4Z2OA 4ORWA 3T1DA 3ZW1B 3RDMA 2OFMX 1RAVA 5FQ7E 2NNEA 4HPBA 1SY1A 1HQQA 1N4JA 1N0SA 2K23A 3EMMA 5LJKA 4XMHA 2R74A 3CQRA 1LPJA 3MVFA 3T6LA 1KXOA 2CM4A 2DM5A 3RY2A 3S26A 3VE1A 4GGRA 1SWSA 1G74A 2NNQA 5K68A 2RTBB 2C1SA 3PK2A 1GKAA 1NQNA 4BX5A 5HA1A 1KGLA 2AT8X 4HPAA 4KIIA 1ML7A 1GT5A 3KVNA 4CPHB 3BDRA 1NP1A 2L68A 1KQXA 3EM0A 3RDXA 1QY1A 1YIVA 5BVQA 2RTJA 4CDCA 2ZSCA 4GDAA 1I05A 2HYSA 2RTMA 4YGHA 4ZHCA 4ES7A 1KT4A 2KW1A 3Q34A 2OVSA 4GH7A 4NP1A 2RTQB 3BSZE 3PDFA 3QQ2A 3WJBA 3KFFA 2A3FX 3D97A 5H9NA 3WBGA 3O22A 1LCVA 4XMGA 2G7BA 1JMZA 5CHKA 1RLBE 4CDDA 1VWMB 3ZQ3A 4U8UM 2AT6X 2F73A 1ERXA 2X8TA 4QGVA 4KCAA 3SZIA 4YKOA 4HPCA 2GH7A 1ZNDA 5EDCA 1OEKA 3O2YA 5HBSA 1B4MA 1BJ7A 1E02A 1EQDA 1NBXA 2DJGA 2IZFB 2LBAA 2OY8A 3BS2A 3RY1A 3OE3A 5FENA 2WR6A 4ID2A 2XSTA 3P6GA 4ZHHA 5EEEA 2X8FA 1SWHA 1TOUA 1AQBA 4ARHA 3MG5A 1JZUA 4NV7A 1VWDB 4OEMA 2Q39A
chains in the Genus database with same CATH topology

2VDFA 1K24A
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 2VDF A;  1K24 A; 
#chains in the Genus database with same CATH topology
 2IZK A;  3FA9 A;  2RTN B;  1JMX A;  3RDS A;  5HCE C;  1AVD A;  4O4O A;  1JV4 A;  4YGG A;  2WQA E;  4YDA A;  3ZWE A;  1SXU A;  5HTD A;  2RQ0 A;  1X71 A;  2IZH B;  2HZR A;  1X8O A;  2RTH B;  3BX7 A;  4JHQ A;  1R0U A;  2JN3 A;  1VWH B;  5HZQ A;  1ACD A;  4BX7 B;  1SRE A;  2IZB A;  2RTD B;  1K24 A;  3ZW1 A;  4PJ2 A;  1EW3 A;  5H9K A;  4Y59 A;  4ZFX A;  2A2G A;  5D45 A;  1URE A;  4TLJ A;  1LUQ A;  1JJU A;  1EXS A;  1RSU B;  3D4R A;  4HFO A;  1NDJ A;  3D95 A;  4GNW A;  1IFC A;  2CBS A;  1T0V A;  4YVB A;  1QWD A;  5CSE A;  4YBP A;  1EPA A;  1SLE B;  3PEC A;  1ICN A;  4OMX A;  1EAL A;  1VWC B;  4U3Q A;  4I60 A;  4GGZ A;  1MM9 A;  2NP1 A;  1VWR B;  2F01 A;  2RTA A;  4KC8 A;  5K06 A;  3UEV A;  4CPH A;  1HMT A;  4MVI A;  2X4M A;  1SLD B;  3CMP A;  2X55 A;  3Q6L A;  3HWF A;  4FQB B;  4M7M A;  4HWM A;  1Y0G A;  1KFF A;  3FEL A;  2POA A;  3C78 X;  1LIB A;  1VWO B;  4GGT A;  1BSQ A;  4ORX A;  3HOL A;  5BVT A;  3FMZ A;  5HCC C;  4LZU A;  3KQ0 A;  2ACP X;  3MM0 A;  3D9W A;  5BVS A;  4DNE A;  2Y3F A;  3WJF A;  3SLT A;  3D96 A;  1JBH A;  4A1H A;  2CBR A;  3TGA A;  3VU1 A;  4GNY A;  4MVL A;  3VE2 A;  1DF8 A;  1Y9L A;  2A0A A;  1MX7 A;  3WZN A;  5HZ5 A;  4DQ4 A;  5HCD C;  1D2U A;  1EII A;  4IAB A;  1KL5 A;  5B3M O;  5LJG A;  2OY1 O;  1N7Y A;  2OL7 A;  1RST B;  1LIF A;  1STR B;  3FR4 A;  2BT9 A;  4NV8 A;  4U9C A;  2I5Z O;  1HN2 A;  2G78 A;  1IFB A;  4NYQ A;  1U17 A;  4ZHG A;  1BWY A;  2G79 A;  3HK1 A;  4I6S A;  4YDB A;  4ML7 B;  4AZR A;  4QGX A;  3WYQ A;  3ELZ A;  1SWU A;  2AVI A;  1DZM A;  2FKG A;  2MO5 A;  2UZ2 A;  1QFT A;  1KT7 A;  3UEU A;  3VG6 A;  1MEP A;  1SXY A;  4GD9 A;  2BLG A;  4Y0R A;  3MBT A;  1VWN B;  5B29 A;  5FFH A;  3S5X A;  1Y55 X;  2P8G A;  2YG2 A;  1QG5 A;  1QQS A;  4BOE A;  4TKJ A;  5FAZ A;  2RTK A;  4KC7 A;  3ZUO A;  5HWZ A;  2YMS A;  4OMW A;  4ALO A;  1QY0 A;  2QM9 A;  4QNI A;  2OL6 O;  1X8U A;  3B2J A;  1SWN A;  1YP7 A;  3B2I A;  3WZO A;  3NX2 A;  1EPB A;  2OY5 O;  3FW4 A;  1CRB A;  3HTY A;  4TKH A;  1A3Y A;  4YCH A;  3KFG A;  2OFA A;  3I17 A;  1A2D A;  2FS6 A;  2Q4N A;  3FIQ A;  3LV4 A;  2RD7 C;  4CDE A;  3P6E A;  3FR2 A;  3EBW A;  4BX7 A;  1JYD A;  2Q9S A;  2QO4 A;  1OBQ A;  2M4L A;  1Z24 A;  1O1U A;  3RDU A;  3AKN A;  2W2B A;  4EKV A;  1KQW A;  4ORY A;  1JIW I;  3RSW A;  3NX1 A;  1ERB A;  5F6B A;  3UAQ A;  1X8P A;  5H8T A;  5HZ9 A;  3TGB A;  2G8C O;  5BYP A;  1A18 A;  2X56 A;  1IKJ A;  1FJ1 E;  2AT5 X;  1UYN X;  4INN A;  4O49 A;  2C4I A;  4O4U A;  2DJF A;  2JU3 A;  4WBK A;  5L8N A;  1HMS A;  1U0X A;  1GX9 A;  2FKJ A;  3RKG A;  5F2B A;  2G5L A;  4YH0 A;  1PEE A;  2CM9 A;  3MX7 A;  3CQN A;  1MVG A;  4O4X A;  4AZO A;  1LKE A;  2A13 A;  1W5R A;  2ALL X;  4KT5 A;  2WUT A;  2XKL A;  2A5C A;  4Y0P A;  4YFP A;  5F1E A;  3HOE A;  3NQ3 A;  1SWF A;  1LFO A;  1CBR A;  2JU7 A;  4EXZ A;  3CKF A;  5AQ6 A;  2CZU A;  1ZNL A;  2IZI A;  1WUB A;  2IZA A;  3TF6 A;  4K19 A;  4BQU A;  1RXK A;  1NP4 A;  3EYC A;  4Z28 A;  3TGC A;  1EIO A;  2IZJ A;  1RBP A;  1RXJ A;  2WEW A;  1STS B;  3V8U A;  1X8N A;  3BY0 A;  3C76 X;  2LBV A;  4Z27 A;  1SWK A;  3S60 A;  3WZQ A;  4MIS A;  2OY7 A;  2KTS A;  1GX3 A;  1WBI A;  4I3D A;  1VYG A;  3IFB A;  3S5V A;  5D4A A;  3FW5 A;  3VHH A;  4CPF A;  4TKB A;  1NGL A;  3P02 A;  4GJV A;  5IO7 A;  3C77 X;  5LJE A;  4QYP A;  4R0B A;  1KT5 A;  3NPO A;  1TXL A;  3F8A A;  3WJE A;  4Z2P A;  1QFV A;  2OL8 O;  1NQM A;  1OEE A;  2IZE B;  3P6H A;  3VPJ E;  1SY2 A;  4GKC A;  1OEJ A;  1PTS A;  4O4S A;  4RUU A;  5LJC A;  4MVE A;  4QZT A;  1H91 A;  2FHN X;  3FR5 A;  4N7C A;  2Q2P A;  3GAQ A;  4WFU A;  5JD2 A;  1LCW A;  2OYB O;  5IO6 A;  1FDQ A;  4GRJ A;  5B11 O;  3ZZV A;  1YUP A;  1FTP A;  1SRG A;  4NYR A;  1HXZ A;  1X8Q A;  5HA0 A;  4A1Y A;  2JW1 A;  2Y3E A;  4ODD A;  3CR6 A;  4LKT A;  4FBR A;  1XKI A;  5DG4 A;  2FR2 A;  2AMM X;  1VWG B;  3FLL A;  4A8Z A;  5IRW A;  3AUM O;  3P6C A;  1E2T A;  1OBP A;  4GUZ A;  3ZW0 B;  4GU8 A;  1B56 A;  2HNX A;  1JYJ A;  1S2P A;  4QRL A;  3I0A A;  1PBO A;  4OS3 A;  5C0N A;  3STK A;  1DZK A;  2QO5 A;  1DC9 A;  1S7D A;  1SRI A;  2C1Q A;  1KOI A;  2A2U A;  3P6F A;  3H3I A;  1S44 A;  1CBQ A;  5HZ6 A;  4EEJ A;  4IB6 A;  1VWK B;  2FTB A;  3WOV A;  4AW8 A;  3U9P C;  2BS5 A;  2GTF X;  2Z4I A;  5KID A;  5KHP A;  3APX A;  3NR3 A;  1ZRY A;  4I95 A;  3U03 A;  2OVD A;  4XMC A;  1K3B A;  1UZ2 X;  4ORS A;  2I5V O;  5AJC A;  5D47 A;  5L8I A;  5HAE A;  1Y9T A;  1I78 A;  1GGL A;  3RBY A;  1LIC A;  1FEL A;  1I06 A;  1I4U A;  1FE3 A;  2E4J A;  1SWT A;  4EQA C;  1JJX A;  1EUO A;  4AZQ A;  1KL3 A;  3APU A;  4GJS A;  4D6A A;  1BEB A;  5LKE A;  2W2F A;  3CBS A;  4ORR A;  4LZV A;  1SY0 A;  4HPD A;  3FEN A;  1VWE B;  4EDE A;  1BRP A;  2RCT A;  5D48 A;  5K67 A;  1VWB B;  5LJD A;  4NLJ A;  3BLG A;  1W4T A;  2N93 A;  2OFB A;  3T2W A;  1EI5 A;  2BHV A;  2RTR B;  2FWV A;  2VDF A;  1NC9 A;  3WJG A;  1BM5 A;  2RN4 A;  5EZ2 A;  1GXA A;  3VG7 A;  2GTL N;  4DCB A;  4COT A;  1BLR A;  4AZM A;  1HQP A;  3APW A;  4MVK A;  5IXG A;  2OVE A;  1SWO A;  2OF8 A;  4UU3 A;  4N7D A;  4CPI A;  3FA7 A;  2ACO A;  4LQZ A;  4YBU A;  1TOW A;  1VWP B;  2O62 A;  3B2H A;  2AT3 X;  3HWE A;  4FBO A;  2JU8 A;  3X00 A;  1LDQ A;  2A5B A;  4BBO A;  1KZX A;  3QKG A;  4CPE A;  2A8G A;  3OBL A;  3SZH A;  1O8V A;  2BS6 A;  1E5P A;  2CAM A;  2Q2M A;  3CWK A;  1VWJ B;  2KD2 A;  3WXQ A;  3VG2 A;  1OPB A;  4ZGF A;  4JGL A;  1B8E A;  1I04 A;  2RA6 A;  1GX8 A;  1LF7 A;  3PQS A;  1BSO A;  2L5P A;  4RUN A;  2MWH A;  3KFH A;  4ZCB A;  3PH5 A;  2GTL O;  2JGS A;  1MX8 A;  1D3S A;  2HLV A;  2QCB A;  4Y0S A;  1SA8 A;  4GDZ A;  3P6D A;  4ON1 A;  3FA6 A;  1LDO A;  3JSQ A;  4IMN A;  5AJB A;  3RDO A;  4OS8 A;  4CDF A;  5L3Y A;  3FID A;  1B0O A;  2X32 A;  3ZW0 A;  1DZP A;  1T68 X;  2K62 A;  3O19 A;  5F6Z A;  2IFB A;  5F58 A;  3DSZ A;  3PH6 A;  1G5W A;  3APV A;  1SWC A;  5CE4 A;  3B2K A;  1MDC A;  1TW4 A;  1DF3 A;  3BX8 A;  3FEK A;  3P24 A;  5EDB A;  1YWD A;  4UU2 A;  3VHI A;  1SWB A;  4XME A;  1CJ5 A;  3DTQ A;  2BSZ A;  4AZN A;  1SWR A;  1AEL A;  1TVQ A;  3PQU A;  1VYF A;  4IB7 A;  1YWB A;  1DZJ A;  1YWA A;  2ANS A;  2NND A;  2F09 A;  3JS1 A;  4XMF A;  4EFG A;  1GT3 A;  5LKF A;  1VWA B;  2WSJ A;  3T2X A;  1AVG I;  4YGZ A;  4NLI A;  2GC9 A;  4GET A;  4WFV A;  5EPQ A;  2QO6 A;  2JMB A;  1SWE A;  4M6S A;  4O3Y A;  4ZH6 A;  1PMP A;  3RWX A;  2KTD A;  5F7G A;  1G7N A;  3EW1 A;  2R56 A;  1L6M A;  4QQ1 A;  3KZA A;  3E3C A;  4NW4 A;  5CYB A;  4QYN A;  1UYO X;  2OZQ A;  4QGW A;  4ZGU A;  5D8J A;  3RZY A;  1SWD A;  4LKP A;  4BGF A;  3T6F A;  1VWI B;  1SWL A;  2FR3 A;  1HBP A;  2RTL A;  1SRF A;  2WQ9 A;  3BRN A;  1QY2 A;  2FHL A;  2RTO B;  1G85 A;  2L9C A;  3NP1 A;  3SLJ A;  5EED A;  2FRS A;  4OS0 A;  1ICM A;  3LHN A;  1SRH A;  2AF5 A;  1JJJ A;  2KT4 B;  1VWL B;  2AKQ A;  2RCQ A;  2ZAI A;  3BU1 A;  2PY1 A;  4GE1 A;  4D6B A;  1HXL A;  1SXX A;  5FQ8 E;  2OF9 A;  1QAB E;  3EC5 A;  1SY3 A;  4KH8 A;  4I3B A;  4YKM A;  3ZW2 A;  2X8S A;  4BVM A;  5LJB A;  1KZW A;  1Y52 X;  1YP6 A;  5B10 O;  3ZUI A;  3LTW A;  2IZD B;  1SWJ A;  1LEL A;  2FGS A;  3U0D A;  1STP A;  1VPR A;  1MOY A;  4ORU A;  2AL0 X;  2X46 A;  3NBX X;  4IRW A;  4B55 A;  4MEE A;  1KT3 A;  3HWD A;  4XMD A;  3WVM A;  3K3L A;  4A60 A;  4Z2V A;  5HZ8 A;  2HMB A;  3HPE A;  4O9S A;  4FBV A;  4Z6J A;  5KIC A;  1CBI A;  1IJ8 A;  3OD9 A;  5IRA A;  1IIU A;  1VYO A;  1OPA A;  1GT4 A;  1X89 A;  2FLJ A;  4NNT A;  4Y5D A;  5B2A O;  1HY2 A;  4GK9 A;  1KT6 A;  5B5G A;  1SLG B;  3HWG A;  1DV9 A;  2IZL B;  2GTL M;  1OSP O;  4CSB A;  3NAD A;  3GE2 A;  2LKK A;  3KFI A;  1P6P A;  4CV7 A;  2FS7 A;  3VG5 A;  1FEM A;  1T8V A;  2CZT A;  1MK5 A;  4FGI B;  1IKE A;  2AH7 X;  5JR8 A;  5L8O A;  3F9D A;  3FEP A;  1GT1 A;  5LJH A;  2RTE B;  2ASN X;  2R73 A;  2EU7 X;  4PSQ A;  2BC3 A;  1XCA A;  3JQO A;  4BX6 B;  1N43 A;  2OVA A;  3WYP A;  1CBS A;  1SWP A;  5HTE A;  1AVE A;  1N9Y A;  4IB9 A;  4JO6 A;  3FA8 A;  4BJ8 A;  1BRQ A;  1ZNK A;  1VWF B;  3RE6 A;  2OFR X;  4QZU A;  3RDQ A;  1ZNH A;  2JOZ A;  2UYW A;  5IRU A;  3UEX A;  4I9R A;  2VFC A;  1IW2 A;  2RTP B;  3PED A;  5FQ6 E;  3STM X;  4CK4 A;  3WJD A;  4U8U N;  3CBC A;  4DQ3 A;  3CKG A;  1FEN A;  3F6Z B;  3FDC A;  3IA8 A;  5DPQ A;  1SWA A;  3WJC A;  2IZC B;  2AT0 X;  1ADL A;  4BX5 B;  1GKA B;  1HMR A;  1E06 A;  2HKD A;  2MF6 A;  3G7X A;  2PI3 O;  4QAE A;  2QOS C;  3VGW A;  4IBA A;  4BCS A;  4YFQ A;  1HBQ A;  1KL4 A;  1LNM A;  1W6F A;  1MUP A;  2WWP A;  4ZH9 A;  2QMI A;  3OJY C;  1U18 A;  3ZI8 A;  4C5P A;  1LCZ A;  1DFV A;  3B2L A;  3NQK A;  4NNS A;  3SZJ A;  4OEL A;  4YMY A;  1SMP I;  1VWQ B;  4L3R A;  1ZNG A;  4IMO A;  3VG3 A;  3VG4 A;  4I3C A;  1PM1 X;  3UEW A;  1LID A;  4ZHF A;  3NQ9 A;  2QOM A;  2VFB A;  1SWQ A;  1SWG A;  2RTG B;  2WEX A;  4O3W A;  4TJZ A;  4MIR A;  4U8U O;  2FT9 A;  4Y0Q A;  1AB0 A;  4IAW A;  1PBY A;  1Y53 X;  2LA7 A;  3N91 A;  5H9L A;  4TQ2 A;  2RTF B;  1GM6 A;  1N9M A;  2LFO A;  3ELX A;  4WHI A;  4O3Z A;  3SOT A;  5B5F A;  1RXH A;  3AEH A;  4YFR A;  4O3X B;  3WZP A;  4JNJ A;  4AYH A;  5IO5 A;  4GZV A;  2IZG B;  4ZHD A;  3L4R A;  2W2A A;  1SLF B;  1BSY A;  4U46 A;  5B27 A;  1YWC A;  4ALB A;  4AZP A;  4ZR2 A;  1ALB A;  4ZJ0 A;  1ZNE A;  1LIE A;  3EW2 A;  2Y32 A;  2MHD A;  2X45 A;  3SAO A;  3AKM A;  4IAX A;  4L1N A;  1OBU A;  2LB6 A;  2RTI B;  4TNN A;  2ZAG A;  1JQP A;  3FYF A;  1E00 A;  1SXW A;  1SRJ A;  3PPT A;  5H9A A;  1A57 A;  4IB8 A;  3RE5 A;  2MM3 A;  2RTC B;  2WPU A;  2Z4H A;  5AEO A;  4I9S A;  4YCE A;  3VHM A;  2L67 A;  4BX6 A;  1I9H A;  2HZQ A;  3TZS A;  3STN A;  3BU9 A;  2MJI A;  3EBK A;  3SLO A;  2X34 A;  4OKA A;  2GJ5 A;  1O1V A;  1BBP A;  3PP6 A;  4Z2O A;  4ORW A;  3T1D A;  3ZW1 B;  3RDM A;  2OFM X;  1RAV A;  5FQ7 E;  2NNE A;  4HPB A;  1SY1 A;  1HQQ A;  1N4J A;  1N0S A;  2K23 A;  3EMM A;  5LJK A;  4XMH A;  2R74 A;  3CQR A;  1LPJ A;  3MVF A;  3T6L A;  1KXO A;  2CM4 A;  2DM5 A;  3RY2 A;  3S26 A;  3VE1 A;  4GGR A;  1SWS A;  1G74 A;  2NNQ A;  5K68 A;  2RTB B;  2C1S A;  3PK2 A;  1GKA A;  1NQN A;  4BX5 A;  5HA1 A;  1KGL A;  2AT8 X;  4HPA A;  4KII A;  1ML7 A;  1GT5 A;  3KVN A;  4CPH B;  3BDR A;  1NP1 A;  2L68 A;  1KQX A;  3EM0 A;  3RDX A;  1QY1 A;  1YIV A;  5BVQ A;  2RTJ A;  4CDC A;  2ZSC A;  4GDA A;  1I05 A;  2HYS A;  2RTM A;  4YGH A;  4ZHC A;  4ES7 A;  1KT4 A;  2KW1 A;  3Q34 A;  2OVS A;  4GH7 A;  4NP1 A;  2RTQ B;  3BSZ E;  3PDF A;  3QQ2 A;  3WJB A;  3KFF A;  2A3F X;  3D97 A;  5H9N A;  3WBG A;  3O22 A;  1LCV A;  4XMG A;  2G7B A;  1JMZ A;  5CHK A;  1RLB E;  4CDD A;  1VWM B;  3ZQ3 A;  4U8U M;  2AT6 X;  2F73 A;  1ERX A;  2X8T A;  4QGV A;  4KCA A;  3SZI A;  4YKO A;  4HPC A;  2GH7 A;  1ZND A;  5EDC A;  1OEK A;  3O2Y A;  5HBS A;  1B4M A;  1BJ7 A;  1E02 A;  1EQD A;  1NBX A;  2DJG A;  2IZF B;  2LBA A;  2OY8 A;  3BS2 A;  3RY1 A;  3OE3 A;  5FEN A;  2WR6 A;  4ID2 A;  2XST A;  3P6G A;  4ZHH A;  5EEE A;  2X8F A;  1SWH A;  1TOU A;  1AQB A;  4ARH A;  3MG5 A;  1JZU A;  4NV7 A;  1VWD B;  4OEM A;  2Q39 A; 
#chains in the Genus database with same CATH homology
 2VDF A;  1K24 A;

...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)

...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

2VDFA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations