1ACPA

Refinement of the nmr structures for acyl carrier protein with scalar coupling data
Total Genus 16
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
16
sequence length
77
structure length
77
Chain Sequence
STIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Fatty acid synthesis protein
molecule keywords ACYL-CARRIER PROTEIN
publication title Refinement of the NMR structures for acyl carrier protein with scalar coupling data.
pubmed doi rcsb
source organism Escherichia coli
total genus 16
structure length 77
sequence length 77
ec nomenclature
pdb deposition date 1990-07-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 1acpA00
3RG2A 1DNYA 2CGQA 3CE7A 1F80D 4PXHB 1L0IA 4CA3A 2N50A 3GZMA 2EHSA 2AFEA 2CG5B 2FQ1A 2K2QA 2MR8A 5HVCA 2FVEA 4NEOA 4DG9A 3NY7B 2ROQA 2FQ2A 2MVUA 2CQ8A 2FVFA 2GDXA 2KG8A 1L0HA 3EJDA 2KOPA 4H2YC 2KGAA 2KORA 2X2BA 2KGEA 4MRTC 5KP7B 2XZ0D 2KGCA 2N6YA 5EJDA 1KLPA 1T8KA 2L22A 4H2XC 3LMOA 1DV5A 4PWVB 2LIWA 1OR5A 2JQ4A 2L0QA 2KOOA 2GDWA 3GZLA 2LIUA 2L4BA 1X3OA 2LTEA 2N98A 2MD9A 1NQ4A 2MR7A 2N5HA 2FACA 2LOLA 2DNWA 2JGPA 2KG9A 4BPFA 2AFDA 4BPGA 1HQBA 4HKGA 2MF4A 2M5RA 4R0MA 2K92A 2MVVA 2KGDA 2MY5A 2FVAA 2XZ1C 3EJEA 1AF8A 5KP8B 2CNRA 5CZDB 2K0XA 2LMLA 2FHSC 1HY8A 2KOQA 2K93A 2JU2A 2N5IA 3EJBA 1ACPA 2AVAA 4BPHA 4IZ6A 2QNWA 2LL8A 2N6ZA 2JU1A 2K0YA 2FADA 2KG6A 2VSQA 2AF8A 2K94A 2EHTA 2KR5A 5KP6B 2KWLA 2KW2A 2FAEA 2LKIA 2KOSA 2L9FA 4H2WC 5HV8A 2PNGA 1VKUA 2LPKA 2FQ0A 2GDYA
chains in the Genus database with same CATH superfamily
3RG2A 3G29A 1DNYA 1A43A 3CE7A 4PXHB 1YJWP 1L0IA 5DCKA 1ZNVA 3VRLC 3GZMA 4U0BA 1YJ9P 2CG5B 2K2QA 2MR8A 3DTJA 5EW5E 3CC7P 1Q82Q 2KG8A 3EJDA 3CCLP 1YHQP 2VLPA 2KORA 2GZJA 2KGEA 3CD6P 5KP7B 1IUQA 2XZ0D 1IMPA 2L22A 1JJ2O 2OARA 3HYBA 4GR6A 5BS1A 2KOOA 2GDWA 3CC4P 2LIUA 2Z44A 1A8OA 1YITP 2N98A 1RO0A 1VQ9P 2FACA 1GXGA 2KG9A 7CEIA 3CCJP 4BPGA 1VQ5P 2OTJP 4HKGA 3I56P 2ERHA 3LRYA 5F2NA 2L6EA 2MVVA 2FVAA 1AF8A 2GZFA 3B5IA 3CMEP 1K9MQ 2FHSC 2K93A 2N5IA 2PEOA 2CWOA 5I4TG 4IZ6A 1RNIA 3CCSP 2K5XA 2K0YA 1K30A 2AF8A 5KP6B 1QVGO 1VQNP 2EG5A 4XROA 3GJNA 2GZGA 2LPKA 2FQ0A 1VQLP 1ZMBA 3NTEA 1F80D 2GZEA 3G1IA 3RG6C 4PH1A 1VQ4P 2AFEA 2FQ1A 5BS2A 2MVUA 1M1KQ 3H4EA 1VQMP 1QRJA 2PEKA 1Q81Q 4WYMA 4H2XC 2PEQA 3G21A 1W2BO 2LIWA 2JQ4A 3U43A 2K0DX 3GZLA 1X3OA 1VQOP 5HGNA 1YIJP 4COPA 4U0AA 2JO0A 1UJZA 1Q7YQ 1VHNA 3E2DA 4BPFA 1KD1Q 3DS2A 3G0VA 4R0MA 4XFZA 2K92A 1E0HA 1IMQA 2KGDA 2XZ1C 3CXCO 5CZDB 1RO2A 1M6EX 2GYKA 2OTLP 1BAJA 4BPHA 5HGOA 2VLOA 3G71P 4F37A 2EHTA 2JB0A 2KWLA 2KW2A 3H47A 2FAEA 2KOSA 1M90Q 3DPHA 4M0IA 1VKUA 3Q20A 1MZ8A 1EMVA 4CA3A 2PY8A 2EHSA 1CEIA 4U0FA 5HVCA 2FVEA 4NEOA 3CCQP 3NY7B 2ONTA 2ROQA 1VQKP 4XFYA 1K73Q 2FVFA 4XFXA 3CCUP 3CPWO 2M8NA 5HGMA 4H2YC 1YI2P 1EIAA 2PEMA 2X2BA 2PENA 2KGCA 2N6YA 3CCVP 5EJDA 1KLPA 1T8KA 1E6JP 3LMOA 1DV5A 1QVFO 2XT1A 3GKLC 2L4BA 2VLNA 4U0EA 2LTEA 1FR2A 2N5HA 2XXMA 1K8AQ 1KC8Q 5F2KA 2JGPA 1D1DA 1NJIQ 1HQBA 2VLQA 2MF4A 1GXHA 4U0CA 1M74A 2MY5A 2LF4A 3G6EP 3DS3A 2JBGA 2CNRA 2K0XA 1ACPA 2WPTA 1AUMA 2QNWA 3MGEA 3WBHA 1GPJA 3P05A 4PH0A 1S72P 2FADA 2KG6A 2VSQA 1VQ6P 2K94A 5HGLA 2PEIA 3H0DA 4U0DA 1KQSO 3G28A 2L9FA 3CMAP 3CC2P 2XV6A 2GDYA 2CGQA 3CCMP 4XRQA 2Z45A 1N8RQ 3CCEP 1VQ7P 2N50A 2BHVA 1VQPP 4DG9A 3M1MA 2Z46A 1Q86Q 5JPAA 3DS0A 2FQ2A 2PEJA 2P9XA 4GR2A 2CQ8A 2M8PA 2GDXA 1L0HA 1UNKA 2DGYA 2M8LA 2KOPA 2KGAA 4COCA 4MRTC 4PWVB 1M6NA 3I55P 1OR5A 2L0QA 2JAZA 2E1MA 2MD9A 1NQ4A 2MR7A 2QA4P 1AYIA 3DS5A 2LOLA 3CCRP 4QNBA 3G26A 3OW2O 2AFDA 1Z6MA 1YJNP 2EFJA 3DS1A 2M5RA 4IPYA 1BXIA 2BUOA 1EOQA 3EJEA 5KP8B 2LMLA 4QKOA 1HY8A 2KOQA 2JU2A 3EJBA 5F2OA 2AVAA 3G1GA 3HZQA 2LL8A 2N6ZA 2JU1A 2QEXP 2NO8A 2EIAA 2GZIA 2JYLA 1VQ8P 4UHPB 2KODA 2KR5A 2JYGA 3B4QA 3G4SP 2LKIA 4H2WC 5HV8A 2PNGA 2DNWA 3DS4A
chains in the Genus database with same CATH topology
3RG2A 1DNYA 2CGQA 3CE7A 1F80D 4PXHB 1L0IA 4CA3A 2N50A 3GZMA 2EHSA 2AFEA 2CG5B 2FQ1A 2K2QA 2MR8A 5HVCA 2FVEA 4NEOA 4DG9A 3NY7B 2ROQA 2FQ2A 2MVUA 2CQ8A 2FVFA 2GDXA 2KG8A 1L0HA 3EJDA 2KOPA 4H2YC 2KGAA 2KORA 2X2BA 2KGEA 4MRTC 5KP7B 2XZ0D 2KGCA 2N6YA 5EJDA 1KLPA 1T8KA 2L22A 4H2XC 3LMOA 1DV5A 4PWVB 2LIWA 1OR5A 2JQ4A 2L0QA 2KOOA 2GDWA 3GZLA 2LIUA 2L4BA 1X3OA 2LTEA 2N98A 2MD9A 1NQ4A 2MR7A 2N5HA 2FACA 2LOLA 2DNWA 2JGPA 2KG9A 4BPFA 2AFDA 4BPGA 1HQBA 4HKGA 2MF4A 2M5RA 4R0MA 2K92A 2MVVA 2KGDA 2MY5A 2FVAA 2XZ1C 3EJEA 1AF8A 5KP8B 2CNRA 5CZDB 2K0XA 2LMLA 2FHSC 1HY8A 2KOQA 2K93A 2JU2A 2N5IA 3EJBA 1ACPA 2AVAA 4BPHA 4IZ6A 2QNWA 2LL8A 2N6ZA 2JU1A 2K0YA 2FADA 2KG6A 2VSQA 2AF8A 2K94A 2EHTA 2KR5A 5KP6B 2KWLA 2KW2A 2FAEA 2LKIA 2KOSA 2L9FA 4H2WC 5HV8A 2PNGA 1VKUA 2LPKA 2FQ0A 2GDYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3RG2 A;  1DNY A;  2CGQ A;  3CE7 A;  1F80 D;  4PXH B;  1L0I A;  4CA3 A;  2N50 A;  3GZM A;  2EHS A;  2AFE A;  2CG5 B;  2FQ1 A;  2K2Q A;  2MR8 A;  5HVC A;  2FVE A;  4NEO A;  4DG9 A;  3NY7 B;  2ROQ A;  2FQ2 A;  2MVU A;  2CQ8 A;  2FVF A;  2GDX A;  2KG8 A;  1L0H A;  3EJD A;  2KOP A;  4H2Y C;  2KGA A;  2KOR A;  2X2B A;  2KGE A;  4MRT C;  5KP7 B;  2XZ0 D;  2KGC A;  2N6Y A;  5EJD A;  1KLP A;  1T8K A;  2L22 A;  4H2X C;  3LMO A;  1DV5 A;  4PWV B;  2LIW A;  1OR5 A;  2JQ4 A;  2L0Q A;  2KOO A;  2GDW A;  3GZL A;  2LIU A;  2L4B A;  1X3O A;  2LTE A;  2N98 A;  2MD9 A;  1NQ4 A;  2MR7 A;  2N5H A;  2FAC A;  2LOL A;  2DNW A;  2JGP A;  2KG9 A;  4BPF A;  2AFD A;  4BPG A;  1HQB A;  4HKG A;  2MF4 A;  2M5R A;  4R0M A;  2K92 A;  2MVV A;  2KGD A;  2MY5 A;  2FVA A;  2XZ1 C;  3EJE A;  1AF8 A;  5KP8 B;  2CNR A;  5CZD B;  2K0X A;  2LML A;  2FHS C;  1HY8 A;  2KOQ A;  2K93 A;  2JU2 A;  2N5I A;  3EJB A;  1ACP A;  2AVA A;  4BPH A;  4IZ6 A;  2QNW A;  2LL8 A;  2N6Z A;  2JU1 A;  2K0Y A;  2FAD A;  2KG6 A;  2VSQ A;  2AF8 A;  2K94 A;  2EHT A;  2KR5 A;  5KP6 B;  2KWL A;  2KW2 A;  2FAE A;  2LKI A;  2KOS A;  2L9F A;  4H2W C;  5HV8 A;  2PNG A;  1VKU A;  2LPK A;  2FQ0 A;  2GDY A; 
#chains in the Genus database with same CATH topology
 3RG2 A;  3G29 A;  1DNY A;  1A43 A;  3CE7 A;  4PXH B;  1YJW P;  1L0I A;  5DCK A;  1ZNV A;  3VRL C;  3GZM A;  4U0B A;  1YJ9 P;  2CG5 B;  2K2Q A;  2MR8 A;  3DTJ A;  5EW5 E;  3CC7 P;  1Q82 Q;  2KG8 A;  3EJD A;  3CCL P;  1YHQ P;  2VLP A;  2KOR A;  2GZJ A;  2KGE A;  3CD6 P;  5KP7 B;  1IUQ A;  2XZ0 D;  1IMP A;  2L22 A;  1JJ2 O;  2OAR A;  3HYB A;  4GR6 A;  5BS1 A;  2KOO A;  2GDW A;  3CC4 P;  2LIU A;  2Z44 A;  1A8O A;  1YIT P;  2N98 A;  1RO0 A;  1VQ9 P;  2FAC A;  1GXG A;  2KG9 A;  7CEI A;  3CCJ P;  4BPG A;  1VQ5 P;  2OTJ P;  4HKG A;  3I56 P;  2ERH A;  3LRY A;  5F2N A;  2L6E A;  2MVV A;  2FVA A;  1AF8 A;  2GZF A;  3B5I A;  3CME P;  1K9M Q;  2FHS C;  2K93 A;  2N5I A;  2PEO A;  2CWO A;  5I4T G;  4IZ6 A;  1RNI A;  3CCS P;  2K5X A;  2K0Y A;  1K30 A;  2AF8 A;  5KP6 B;  1QVG O;  1VQN P;  2EG5 A;  4XRO A;  3GJN A;  2GZG A;  2LPK A;  2FQ0 A;  1VQL P;  1ZMB A;  3NTE A;  1F80 D;  2GZE A;  3G1I A;  3RG6 C;  4PH1 A;  1VQ4 P;  2AFE A;  2FQ1 A;  5BS2 A;  2MVU A;  1M1K Q;  3H4E A;  1VQM P;  1QRJ A;  2PEK A;  1Q81 Q;  4WYM A;  4H2X C;  2PEQ A;  3G21 A;  1W2B O;  2LIW A;  2JQ4 A;  3U43 A;  2K0D X;  3GZL A;  1X3O A;  1VQO P;  5HGN A;  1YIJ P;  4COP A;  4U0A A;  2JO0 A;  1UJZ A;  1Q7Y Q;  1VHN A;  3E2D A;  4BPF A;  1KD1 Q;  3DS2 A;  3G0V A;  4R0M A;  4XFZ A;  2K92 A;  1E0H A;  1IMQ A;  2KGD A;  2XZ1 C;  3CXC O;  5CZD B;  1RO2 A;  1M6E X;  2GYK A;  2OTL P;  1BAJ A;  4BPH A;  5HGO A;  2VLO A;  3G71 P;  4F37 A;  2EHT A;  2JB0 A;  2KWL A;  2KW2 A;  3H47 A;  2FAE A;  2KOS A;  1M90 Q;  3DPH A;  4M0I A;  1VKU A;  3Q20 A;  1MZ8 A;  1EMV A;  4CA3 A;  2PY8 A;  2EHS A;  1CEI A;  4U0F A;  5HVC A;  2FVE A;  4NEO A;  3CCQ P;  3NY7 B;  2ONT A;  2ROQ A;  1VQK P;  4XFY A;  1K73 Q;  2FVF A;  4XFX A;  3CCU P;  3CPW O;  2M8N A;  5HGM A;  4H2Y C;  1YI2 P;  1EIA A;  2PEM A;  2X2B A;  2PEN A;  2KGC A;  2N6Y A;  3CCV P;  5EJD A;  1KLP A;  1T8K A;  1E6J P;  3LMO A;  1DV5 A;  1QVF O;  2XT1 A;  3GKL C;  2L4B A;  2VLN A;  4U0E A;  2LTE A;  1FR2 A;  2N5H A;  2XXM A;  1K8A Q;  1KC8 Q;  5F2K A;  2JGP A;  1D1D A;  1NJI Q;  1HQB A;  2VLQ A;  2MF4 A;  1GXH A;  4U0C A;  1M74 A;  2MY5 A;  2LF4 A;  3G6E P;  3DS3 A;  2JBG A;  2CNR A;  2K0X A;  1ACP A;  2WPT A;  1AUM A;  2QNW A;  3MGE A;  3WBH A;  1GPJ A;  3P05 A;  4PH0 A;  1S72 P;  2FAD A;  2KG6 A;  2VSQ A;  1VQ6 P;  2K94 A;  5HGL A;  2PEI A;  3H0D A;  4U0D A;  1KQS O;  3G28 A;  2L9F A;  3CMA P;  3CC2 P;  2XV6 A;  2GDY A;  2CGQ A;  3CCM P;  4XRQ A;  2Z45 A;  1N8R Q;  3CCE P;  1VQ7 P;  2N50 A;  2BHV A;  1VQP P;  4DG9 A;  3M1M A;  2Z46 A;  1Q86 Q;  5JPA A;  3DS0 A;  2FQ2 A;  2PEJ A;  2P9X A;  4GR2 A;  2CQ8 A;  2M8P A;  2GDX A;  1L0H A;  1UNK A;  2DGY A;  2M8L A;  2KOP A;  2KGA A;  4COC A;  4MRT C;  4PWV B;  1M6N A;  3I55 P;  1OR5 A;  2L0Q A;  2JAZ A;  2E1M A;  2MD9 A;  1NQ4 A;  2MR7 A;  2QA4 P;  1AYI A;  3DS5 A;  2LOL A;  3CCR P;  4QNB A;  3G26 A;  3OW2 O;  2AFD A;  1Z6M A;  1YJN P;  2EFJ A;  3DS1 A;  2M5R A;  4IPY A;  1BXI A;  2BUO A;  1EOQ A;  3EJE A;  5KP8 B;  2LML A;  4QKO A;  1HY8 A;  2KOQ A;  2JU2 A;  3EJB A;  5F2O A;  2AVA A;  3G1G A;  3HZQ A;  2LL8 A;  2N6Z A;  2JU1 A;  2QEX P;  2NO8 A;  2EIA A;  2GZI A;  2JYL A;  1VQ8 P;  4UHP B;  2KOD A;  2KR5 A;  2JYG A;  3B4Q A;  3G4S P;  2LKI A;  4H2W C;  5HV8 A;  2PNG A;  2DNW A;  3DS4 A; 
#chains in the Genus database with same CATH homology
 3RG2 A;  1DNY A;  2CGQ A;  3CE7 A;  1F80 D;  4PXH B;  1L0I A;  4CA3 A;  2N50 A;  3GZM A;  2EHS A;  2AFE A;  2CG5 B;  2FQ1 A;  2K2Q A;  2MR8 A;  5HVC A;  2FVE A;  4NEO A;  4DG9 A;  3NY7 B;  2ROQ A;  2FQ2 A;  2MVU A;  2CQ8 A;  2FVF A;  2GDX A;  2KG8 A;  1L0H A;  3EJD A;  2KOP A;  4H2Y C;  2KGA A;  2KOR A;  2X2B A;  2KGE A;  4MRT C;  5KP7 B;  2XZ0 D;  2KGC A;  2N6Y A;  5EJD A;  1KLP A;  1T8K A;  2L22 A;  4H2X C;  3LMO A;  1DV5 A;  4PWV B;  2LIW A;  1OR5 A;  2JQ4 A;  2L0Q A;  2KOO A;  2GDW A;  3GZL A;  2LIU A;  2L4B A;  1X3O A;  2LTE A;  2N98 A;  2MD9 A;  1NQ4 A;  2MR7 A;  2N5H A;  2FAC A;  2LOL A;  2DNW A;  2JGP A;  2KG9 A;  4BPF A;  2AFD A;  4BPG A;  1HQB A;  4HKG A;  2MF4 A;  2M5R A;  4R0M A;  2K92 A;  2MVV A;  2KGD A;  2MY5 A;  2FVA A;  2XZ1 C;  3EJE A;  1AF8 A;  5KP8 B;  2CNR A;  5CZD B;  2K0X A;  2LML A;  2FHS C;  1HY8 A;  2KOQ A;  2K93 A;  2JU2 A;  2N5I A;  3EJB A;  1ACP A;  2AVA A;  4BPH A;  4IZ6 A;  2QNW A;  2LL8 A;  2N6Z A;  2JU1 A;  2K0Y A;  2FAD A;  2KG6 A;  2VSQ A;  2AF8 A;  2K94 A;  2EHT A;  2KR5 A;  5KP6 B;  2KWL A;  2KW2 A;  2FAE A;  2LKI A;  2KOS A;  2L9F A;  4H2W C;  5HV8 A;  2PNG A;  1VKU A;  2LPK A;  2FQ0 A;  2GDY A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...