2Z46A

Crystal structure of native-orf134
Total Genus 44
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
44
sequence length
109
structure length
109
Chain Sequence
EFKKVAKETAITLQSYLTYQAVRLISQQLSETNPGQAIWLGEFSKRHPIQESDLYLEAMMLENKELVLRILTVRENLAEGVLEFLPEMVLSQIKQSNGNHRRSLLERLT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal Structure of ORF134
rcsb
molecule tags Chaperone
source organism Synechococcus sp.
molecule keywords ORF134
total genus 44
structure length 109
sequence length 109
chains with identical sequence B, C, D, E, F
ec nomenclature
pdb deposition date 2007-06-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02341 RcbX RbcX protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.210 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A 2z46A00
2Z44A 2PENA 2Z46A 2PEQA 2Z45A 2PEKA 2PY8A 3HYBA 2PEMA 2PEOA 2PEIA 3Q20A 5BS2A 2PEJA 5BS1A 3RG6C 4GR2A 4GR6A
chains in the Genus database with same CATH superfamily
1RO0A 3DS5A 3U43A 2MD9A 1Q82Q 2AFDA 2AFEA 3NTEA 1YJWP 1EIAA 2ONTA 3CC4P 2JO0A 2K0DX 5F2OA 1ZNVA 3EJBA 4U0BA 2KOPA 2QNWA 3MGEA 2KGCA 3G6EP 3CCJP 3CCQP 1RO2A 7CEIA 5KP8B 2KOSA 2KODA 3CXCO 2KORA 1M74A 2VSQA 1AYIA 2VLNA 1K73Q 1IUQA 2GZJA 5HV8A 1D1DA 1VQPP 3LMOA 2OTLP 2WPTA 4F37A 3NY7B 5F2KA 1M1KQ 3DS2A 2XV6A 5DCKA 2MR8A 1HQBA 2JU1A 3DS0A 2GDWA 1VQ5P 2LOLA 2GDYA 3CMEP 2JGPA 2KR5A 1YIJP 1VQ9P 3CCUP 1YHQP 3GJNA 3VRLC 3EJDA 3I55P 1GXHA 2K94A 1K30A 2FVAA 1VHNA 2K93A 1M6NA 1DV5A 3DS1A 1OR5A 1CEIA 2FVEA 2GZIA 1BAJA 2FQ0A 4HKGA 1VQNP 3CE7A 3G1GA 2KGEA 4XFZA 1M90Q 1YI2P 4XROA 3G28A 2LTEA 4QNBA 2N5IA 1VQOP 5EW5E 4PWVB 2VLQA 2PY8A 4U0AA 2XXMA 1Q86Q 1A8OA 1JJ2O 1VQ8P 2JQ4A 3B5IA 4MRTC 4H2WC 4IZ6A 1VQ4P 4U0CA 1KC8Q 3G21A 4CA3A 4QKOA 3EJEA 3G29A 1W2BO 1VKUA 3CCRP 3H0DA 4U0DA 2JBGA 2Z44A 2PENA 4H2XC 1VQ6P 2VLOA 5HGLA 1S72P 2EFJA 2K92A 1AF8A 2BHVA 2LIUA 5HGNA 1L0HA 1YJ9P 2Z45A 2KG6A 3CC7P 2KG8A 2JYGA 3G26A 1EOQA 5JPAA 5KP6B 1NQ4A 1UJZA 4U0EA 2PEMA 5BS1A 3G1IA 2L22A 3HZQA 2MVVA 2LPKA 2K0YA 3DS3A 2MR7A 2CG5B 3DS4A 2ROQA 2PEIA 1K9MQ 3CMAP 5KP7B 3CPWO 1QVGO 4XFXA 2AVAA 1E0HA 2N50A 2X2BA 2CWOA 1HY8A 3CD6P 1DNYA 3OW2O 1ACPA 3CCLP 1K8AQ 2M8NA 1RNIA 2KOOA 5HVCA 1N8RQ 1MZ8A 2FQ1A 3DTJA 5BS2A 2PEJA 2L0QA 3H4EA 4PH0A 3CC2P 4XRQA 2LMLA 2EG5A 4WYMA 2M8PA 4PH1A 2AF8A 2N6ZA 1VQ7P 3CCSP 2CQ8A 2K0XA 1Q7YQ 3GKLC 1IMQA 2L4BA 2GZFA 2L9FA 5HGMA 3LRYA 3G71P 2FVFA 4PXHB 3CCVP 2CGQA 2GYKA 1Z6MA 1M6EX 2DGYA 2JU2A 2KGDA 1AUMA 2KWLA 1L0IA 1YJNP 4COPA 2N6YA 4BPGA 2FACA 1KQSO 2M5RA 3RG6C 3CCEP 1VQKP 2PEKA 3G0VA 2EHSA 2GZGA 2NO8A 1EMVA 2FADA 3G4SP 2DNWA 2LIWA 2GDXA 2KGAA 4NEOA 1F80D 1YITP 1IMPA 4R0MA 1QRJA 2XT1A 2LKIA 3GZMA 2QEXP 1VQMP 2LF4A 2ERHA 2LL8A 3I56P 2XZ1C 1QVFO 1T8KA 2PEQA 2MVUA 2FQ2A 2MY5A 1UNKA 2JYLA 1FR2A 1KD1Q 2PEOA 2K2QA 2XZ0D 4GR2A 2KG9A 4H2YC 4COCA 1X3OA 2VLPA 2PNGA 5EJDA 4U0FA 1Q81Q 5I4TG 2Z46A 2L6EA 2EHTA 4BPHA 3M1MA 2OARA 3P05A 2P9XA 2FHSC 3HYBA 2K5XA 4UHPB 3GZLA 3Q20A 5CZDB 3H47A 3WBHA 4M0IA 3CCMP 2N5HA 2CNRA 2E1MA 1A43A 4DG9A 4GR6A 4IPYA 1KLPA 4XFYA 2MF4A 2M8LA 3DPHA 1GXGA 4BPFA 1ZMBA 2FAEA 2KOQA 5HGOA 2EIAA 2OTJP 2BUOA 3E2DA 2KW2A 2JAZA 1NJIQ 2QA4P 3RG2A 5F2NA 2JB0A 2GZEA 1E6JP 1GPJA 1VQLP 3B4QA 1BXIA 2N98A
chains in the Genus database with same CATH topology
1K9MQ 3G4SP 1RO0A 3DS5A 3CMAP 1YITP 1BAJA 3CPWO 1QVGO 1QRJA 4XFXA 1VQNP 2XT1A 2QEXP 3G1GA 1VQMP 2LF4A 4XFZA 1M90Q 1YI2P 4XROA 3I56P 3G28A 1Q82Q 4QNBA 1QVFO 1VQOP 2CWOA 3CD6P 3OW2O 3NTEA 2PEQA 2PY8A 3CCLP 1K8AQ 1YJWP 2JYLA 1EIAA 1RNIA 2M8NA 2ONTA 4U0AA 3CC4P 1KD1Q 1N8RQ 2JO0A 2XXMA 3DTJA 2PEOA 5BS2A 2PEJA 3H4EA 5F2OA 4PH0A 1Q86Q 1A8OA 4GR2A 4U0BA 1JJ2O 1VQ8P 3CC2P 4COCA 4XRQA 3B5IA 2EG5A 4WYMA 3MGEA 2M8PA 3G6EP 3CCJP 3CCQP 4U0FA 1VQ4P 1RO2A 4PH1A 4U0CA 1Q81Q 2KODA 1KC8Q 3CXCO 3G21A 1M74A 5I4TG 2Z46A 2L6EA 3G29A 1W2BO 1VQ7P 3CCRP 1K73Q 3M1MA 2OARA 3CCSP 3H0DA 1IUQA 4U0DA 2Z44A 3P05A 2P9XA 2PENA 1D1DA 3HYBA 1Q7YQ 1VQPP 3Q20A 1VQ6P 3H47A 3WBHA 4M0IA 3CCMP 5HGLA 1S72P 5HGMA 3LRYA 2EFJA 3G71P 2BHVA 5HGNA 2OTLP 1YJ9P 2Z45A 3CCVP 3CC7P 2E1MA 2JYGA 1A43A 3G26A 1EOQA 5F2KA 1M6EX 4GR6A 4IPYA 1M1KQ 4XFYA 5JPAA 3DS2A 2XV6A 2M8LA 2DGYA 3DPHA 5DCKA 1ZMBA 3DS0A 4U0EA 2PEMA 1AUMA 5BS1A 3G1IA 5HGOA 1VQ5P 3HZQA 2EIAA 3DS3A 2OTJP 1YJNP 3CMEP 4COPA 2BUOA 3E2DA 1YIJP 1KQSO 3RG6C 1NJIQ 2QA4P 1VQKP 1VQ9P 3CCUP 1YHQP 3CCEP 2PEKA 3G0VA 3VRLC 5F2NA 3DS4A 3I55P 1E6JP 1K30A 2PEIA 1VQLP 1M6NA 3DS1A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2Z44 A;  2PEN A;  2Z46 A;  2PEQ A;  2Z45 A;  2PEK A;  2PY8 A;  3HYB A;  2PEM A;  2PEO A;  2PEI A;  3Q20 A;  5BS2 A;  2PEJ A;  5BS1 A;  3RG6 C;  4GR2 A;  4GR6 A; 
#chains in the Genus database with same CATH topology
 1RO0 A;  3DS5 A;  3U43 A;  2MD9 A;  1Q82 Q;  2AFD A;  2AFE A;  3NTE A;  1YJW P;  1EIA A;  2ONT A;  3CC4 P;  2JO0 A;  2K0D X;  5F2O A;  1ZNV A;  3EJB A;  4U0B A;  2KOP A;  2QNW A;  3MGE A;  2KGC A;  3G6E P;  3CCJ P;  3CCQ P;  1RO2 A;  7CEI A;  5KP8 B;  2KOS A;  2KOD A;  3CXC O;  2KOR A;  1M74 A;  2VSQ A;  1AYI A;  2VLN A;  1K73 Q;  1IUQ A;  2GZJ A;  5HV8 A;  1D1D A;  1VQP P;  3LMO A;  2OTL P;  2WPT A;  4F37 A;  3NY7 B;  5F2K A;  1M1K Q;  3DS2 A;  2XV6 A;  5DCK A;  2MR8 A;  1HQB A;  2JU1 A;  3DS0 A;  2GDW A;  1VQ5 P;  2LOL A;  2GDY A;  3CME P;  2JGP A;  2KR5 A;  1YIJ P;  1VQ9 P;  3CCU P;  1YHQ P;  3GJN A;  3VRL C;  3EJD A;  3I55 P;  1GXH A;  2K94 A;  1K30 A;  2FVA A;  1VHN A;  2K93 A;  1M6N A;  1DV5 A;  3DS1 A;  1OR5 A;  1CEI A;  2FVE A;  2GZI A;  1BAJ A;  2FQ0 A;  4HKG A;  1VQN P;  3CE7 A;  3G1G A;  2KGE A;  4XFZ A;  1M90 Q;  1YI2 P;  4XRO A;  3G28 A;  2LTE A;  4QNB A;  2N5I A;  1VQO P;  5EW5 E;  4PWV B;  2VLQ A;  2PY8 A;  4U0A A;  2XXM A;  1Q86 Q;  1A8O A;  1JJ2 O;  1VQ8 P;  2JQ4 A;  3B5I A;  4MRT C;  4H2W C;  4IZ6 A;  1VQ4 P;  4U0C A;  1KC8 Q;  3G21 A;  4CA3 A;  4QKO A;  3EJE A;  3G29 A;  1W2B O;  1VKU A;  3CCR P;  3H0D A;  4U0D A;  2JBG A;  2Z44 A;  2PEN A;  4H2X C;  1VQ6 P;  2VLO A;  5HGL A;  1S72 P;  2EFJ A;  2K92 A;  1AF8 A;  2BHV A;  2LIU A;  5HGN A;  1L0H A;  1YJ9 P;  2Z45 A;  2KG6 A;  3CC7 P;  2KG8 A;  2JYG A;  3G26 A;  1EOQ A;  5JPA A;  5KP6 B;  1NQ4 A;  1UJZ A;  4U0E A;  2PEM A;  5BS1 A;  3G1I A;  2L22 A;  3HZQ A;  2MVV A;  2LPK A;  2K0Y A;  3DS3 A;  2MR7 A;  2CG5 B;  3DS4 A;  2ROQ A;  2PEI A;  1K9M Q;  3CMA P;  5KP7 B;  3CPW O;  1QVG O;  4XFX A;  2AVA A;  1E0H A;  2N50 A;  2X2B A;  2CWO A;  1HY8 A;  3CD6 P;  1DNY A;  3OW2 O;  1ACP A;  3CCL P;  1K8A Q;  2M8N A;  1RNI A;  2KOO A;  5HVC A;  1N8R Q;  1MZ8 A;  2FQ1 A;  3DTJ A;  5BS2 A;  2PEJ A;  2L0Q A;  3H4E A;  4PH0 A;  3CC2 P;  4XRQ A;  2LML A;  2EG5 A;  4WYM A;  2M8P A;  4PH1 A;  2AF8 A;  2N6Z A;  1VQ7 P;  3CCS P;  2CQ8 A;  2K0X A;  1Q7Y Q;  3GKL C;  1IMQ A;  2L4B A;  2GZF A;  2L9F A;  5HGM A;  3LRY A;  3G71 P;  2FVF A;  4PXH B;  3CCV P;  2CGQ A;  2GYK A;  1Z6M A;  1M6E X;  2DGY A;  2JU2 A;  2KGD A;  1AUM A;  2KWL A;  1L0I A;  1YJN P;  4COP A;  2N6Y A;  4BPG A;  2FAC A;  1KQS O;  2M5R A;  3RG6 C;  3CCE P;  1VQK P;  2PEK A;  3G0V A;  2EHS A;  2GZG A;  2NO8 A;  1EMV A;  2FAD A;  3G4S P;  2DNW A;  2LIW A;  2GDX A;  2KGA A;  4NEO A;  1F80 D;  1YIT P;  1IMP A;  4R0M A;  1QRJ A;  2XT1 A;  2LKI A;  3GZM A;  2QEX P;  1VQM P;  2LF4 A;  2ERH A;  2LL8 A;  3I56 P;  2XZ1 C;  1QVF O;  1T8K A;  2PEQ A;  2MVU A;  2FQ2 A;  2MY5 A;  1UNK A;  2JYL A;  1FR2 A;  1KD1 Q;  2PEO A;  2K2Q A;  2XZ0 D;  4GR2 A;  2KG9 A;  4H2Y C;  4COC A;  1X3O A;  2VLP A;  2PNG A;  5EJD A;  4U0F A;  1Q81 Q;  5I4T G;  2Z46 A;  2L6E A;  2EHT A;  4BPH A;  3M1M A;  2OAR A;  3P05 A;  2P9X A;  2FHS C;  3HYB A;  2K5X A;  4UHP B;  3GZL A;  3Q20 A;  5CZD B;  3H47 A;  3WBH A;  4M0I A;  3CCM P;  2N5H A;  2CNR A;  2E1M A;  1A43 A;  4DG9 A;  4GR6 A;  4IPY A;  1KLP A;  4XFY A;  2MF4 A;  2M8L A;  3DPH A;  1GXG A;  4BPF A;  1ZMB A;  2FAE A;  2KOQ A;  5HGO A;  2EIA A;  2OTJ P;  2BUO A;  3E2D A;  2KW2 A;  2JAZ A;  1NJI Q;  2QA4 P;  3RG2 A;  5F2N A;  2JB0 A;  2GZE A;  1E6J P;  1GPJ A;  1VQL P;  3B4Q A;  1BXI A;  2N98 A; 
#chains in the Genus database with same CATH homology
 1K9M Q;  3G4S P;  1RO0 A;  3DS5 A;  3CMA P;  1YIT P;  1BAJ A;  3CPW O;  1QVG O;  1QRJ A;  4XFX A;  1VQN P;  2XT1 A;  2QEX P;  3G1G A;  1VQM P;  2LF4 A;  4XFZ A;  1M90 Q;  1YI2 P;  4XRO A;  3I56 P;  3G28 A;  1Q82 Q;  4QNB A;  1QVF O;  1VQO P;  2CWO A;  3CD6 P;  3OW2 O;  3NTE A;  2PEQ A;  2PY8 A;  3CCL P;  1K8A Q;  1YJW P;  2JYL A;  1EIA A;  1RNI A;  2M8N A;  2ONT A;  4U0A A;  3CC4 P;  1KD1 Q;  1N8R Q;  2JO0 A;  2XXM A;  3DTJ A;  2PEO A;  5BS2 A;  2PEJ A;  3H4E A;  5F2O A;  4PH0 A;  1Q86 Q;  1A8O A;  4GR2 A;  4U0B A;  1JJ2 O;  1VQ8 P;  3CC2 P;  4COC A;  4XRQ A;  3B5I A;  2EG5 A;  4WYM A;  3MGE A;  2M8P A;  3G6E P;  3CCJ P;  3CCQ P;  4U0F A;  1VQ4 P;  1RO2 A;  4PH1 A;  4U0C A;  1Q81 Q;  2KOD A;  1KC8 Q;  3CXC O;  3G21 A;  1M74 A;  5I4T G;  2Z46 A;  2L6E A;  3G29 A;  1W2B O;  1VQ7 P;  3CCR P;  1K73 Q;  3M1M A;  2OAR A;  3CCS P;  3H0D A;  1IUQ A;  4U0D A;  2Z44 A;  3P05 A;  2P9X A;  2PEN A;  1D1D A;  3HYB A;  1Q7Y Q;  1VQP P;  3Q20 A;  1VQ6 P;  3H47 A;  3WBH A;  4M0I A;  3CCM P;  5HGL A;  1S72 P;  5HGM A;  3LRY A;  2EFJ A;  3G71 P;  2BHV A;  5HGN A;  2OTL P;  1YJ9 P;  2Z45 A;  3CCV P;  3CC7 P;  2E1M A;  2JYG A;  1A43 A;  3G26 A;  1EOQ A;  5F2K A;  1M6E X;  4GR6 A;  4IPY A;  1M1K Q;  4XFY A;  5JPA A;  3DS2 A;  2XV6 A;  2M8L A;  2DGY A;  3DPH A;  5DCK A;  1ZMB A;  3DS0 A;  4U0E A;  2PEM A;  1AUM A;  5BS1 A;  3G1I A;  5HGO A;  1VQ5 P;  3HZQ A;  2EIA A;  3DS3 A;  2OTJ P;  1YJN P;  3CME P;  4COP A;  2BUO A;  3E2D A;  1YIJ P;  1KQS O;  3RG6 C;  1NJI Q;  2QA4 P;  1VQK P;  1VQ9 P;  3CCU P;  1YHQ P;  3CCE P;  2PEK A;  3G0V A;  3VRL C;  5F2N A;  3DS4 A;  3I55 P;  1E6J P;  1K30 A;  2PEI A;  1VQL P;  1M6N A;  3DS1 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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