2Z46A

Crystal structure of native-orf134
Total Genus 44
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
44
sequence length
109
structure length
109
Chain Sequence
EFKKVAKETAITLQSYLTYQAVRLISQQLSETNPGQAIWLGEFSKRHPIQESDLYLEAMMLENKELVLRILTVRENLAEGVLEFLPEMVLSQIKQSNGNHRRSLLERLT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal Structure of ORF134
rcsb
source organism Synechococcus sp.
molecule tags Chaperone
molecule keywords ORF134
total genus 44
structure length 109
sequence length 109
chains with identical sequence B, C, D, E, F
ec nomenclature
pdb deposition date 2007-06-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02341 RcbX RbcX protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.210 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A 2z46A00
2PEKA 2Z45A 5BS2A 2PEOA 2Z44A 3Q20A 2PEMA 5BS1A 4GR6A 4GR2A 3RG6C 2PEJA 2PENA 2PEIA 2PEQA 2PY8A 2Z46A 3HYBA
chains in the Genus database with same CATH superfamily
3MGEA 3CD6P 3NTEA 5HV8A 4H2XC 4IPYA 3GKLC 4PWVB 4U0DA 2MD9A 2KODA 2WPTA 1QVFO 2EIAA 2KG6A 2M8NA 2CQ8A 1VQ4P 2QA4P 2L6EA 1VQNP 2VLOA 4U0AA 3CCEP 3RG2A 1CEIA 2XT1A 3DS0A 1RO2A 2M5RA 1ZMBA 1F80D 2K5XA 2M8PA 5JPAA 2BUOA 2PEQA 2PNGA 2FQ0A 3CC7P 3DTJA 2JGPA 2Z45A 1VQ7P 2VSQA 2K0YA 4PXHB 5HVCA 7CEIA 1YHQP 2KGCA 4QNBA 3P05A 2MF4A 2L0QA 1Q82Q 2KOSA 2LIUA 2LMLA 3G6EP 2LOLA 2NO8A 4UHPB 3DS4A 2XXMA 3CMEP 3CCQP 2N5IA 1EMVA 2FVFA 3M1MA 2PEIA 1VKUA 1IMQA 1HY8A 2K0XA 5I4TG 1VQPP 2KG8A 3GZMA 3H0DA 2KR5A 1GPJA 3HZQA 1E0HA 2K0DX 2DGYA 3RG6C 2KOOA 2KG9A 2VLNA 1KD1Q 1YJWP 1M6EX 3G26A 1BAJA 3CC2P 2BHVA 2P9XA 5BS2A 2PEMA 3CPWO 3CXCO 1VQMP 2PY8A 5F2NA 3GZLA 4PH0A 1ZNVA 2AFEA 4PH1A 2JQ4A 3E2DA 2N6YA 1KLPA 2XZ1C 2N98A 2L22A 3LMOA 3HYBA 3DS1A 1GXGA 2LF4A 1RO0A 2AVAA 1N8RQ 3U43A 3EJDA 2FQ2A 1DNYA 3B4QA 1UJZA 2KGDA 2KW2A 2ONTA 5HGNA 4GR2A 4M0IA 2N50A 3DS2A 2XV6A 2MVUA 2N6ZA 5DCKA 2QNWA 2EFJA 1GXHA 5KP8B 3CC4P 4U0FA 2JO0A 1VHNA 1IUQA 4DG9A 2FADA 2N5HA 3CCLP 2KGAA 2VLPA 1UNKA 2QEXP 4XROA 3G4SP 2GDYA 3G29A 4BPHA 1FR2A 3G0VA 1M6NA 2EG5A 2KOPA 1YIJP 1JJ2O 1KC8Q 4U0EA 3CMAP 4XRQA 2FHSC 2JAZA 1A43A 1KQSO 1OR5A 1K73Q 1VQKP 2KORA 2VLQA 3LRYA 2CWOA 1HQBA 2FQ1A 2FAEA 1L0HA 2GDWA 1VQ5P 2GZGA 2JB0A 2LL8A 2ERHA 2OTJP 3CCVP 3CE7A 4WYMA 1QRJA 2JU2A 3CCMP 2KWLA 3G1IA 1BXIA 3G71P 2EHTA 2FVEA 1M74A 4R0MA 1NQ4A 1YJ9P 1VQ8P 5HGOA 1EIAA 1NJIQ 1VQ9P 4XFXA 2EHSA 5CZDB 2MR8A 3VRLC 2PEOA 2OTLP 2MY5A 1D1DA 4H2YC 2KGEA 2L4BA 3G1GA 3H4EA 5KP7B 2CNRA 2JYLA 2KOQA 1YI2P 2K94A 1VQLP 3CCJP 2K2QA 2L9FA 3I56P 2GZEA 2FVAA 4COCA 1AUMA 1Z6MA 1L0IA 2AF8A 2MR7A 2Z44A 2GZJA 2PEJA 1YJNP 3DS5A 1EOQA 3I55P 2JU1A 1YITP 4BPFA 4GR6A 1QVGO 1IMPA 2FACA 4CA3A 3NY7B 1M1KQ 2PEKA 3EJBA 4HKGA 4IZ6A 2GYKA 4H2WC 4BPGA 5F2KA 3DPHA 1A8OA 3H47A 3G28A 1K30A 1AYIA 4U0BA 5EW5E 2OARA 1M90Q 2LKIA 1MZ8A 2JYGA 2K93A 1DV5A 5HGMA 2GZFA 5BS1A 2CG5B 1AF8A 2CGQA 2MVVA 3CCSP 3B5IA 1K9MQ 2GDXA 2X2BA 1RNIA 3OW2O 4COPA 2PENA 2Z46A 4F37A 1Q7YQ 2AFDA 4QKOA 2E1MA 3G21A 1T8KA 3Q20A 4NEOA 1ACPA 4U0CA 4XFYA 2LIWA 5F2OA 2DNWA 2ROQA 3CCRP 2M8LA 4MRTC 1K8AQ 1Q86Q 1X3OA 2LPKA 1VQ6P 5HGLA 2GZIA 3WBHA 1W2BO 3GJNA 5EJDA 3CCUP 2LTEA 1Q81Q 1E6JP 3EJEA 2XZ0D 3DS3A 1S72P 5KP6B 4XFZA 2K92A 1VQOP 2JBGA
chains in the Genus database with same CATH topology
2BHVA 2P9XA 3MGEA 5BS2A 3CD6P 1A43A 1KQSO 2PEMA 3CPWO 3NTEA 4GR6A 3CXCO 1QVGO 4IPYA 1VQMP 2PY8A 5F2NA 4U0DA 4PH0A 1K73Q 1VQKP 4PH1A 1M1KQ 2KODA 1QVFO 3LRYA 2EIAA 2CWOA 2PEKA 3E2DA 2M8NA 1VQ5P 1VQ4P 5F2KA 3DPHA 1A8OA 3H47A 3G28A 2QA4P 2L6EA 1VQNP 1K30A 3HYBA 4U0AA 4U0BA 3CCEP 3DS1A 2OTJP 2OARA 1M90Q 2XT1A 3DS0A 2LF4A 1RO2A 3CCVP 1RO0A 4WYMA 1N8RQ 1ZMBA 2JYGA 5HGMA 2M8PA 5JPAA 2BUOA 2PEQA 5BS1A 1QRJA 3CCSP 3CC7P 3B5IA 3CCMP 1K9MQ 3DTJA 1RNIA 2Z45A 3OW2O 4COPA 3G1IA 3G71P 1VQ7P 2ONTA 1M74A 2PENA 2Z46A 5HGNA 1Q7YQ 1YHQP 1YJ9P 2E1MA 4QNBA 3G21A 3P05A 4GR2A 1EIAA 4M0IA 5HGOA 1VQ8P 1NJIQ 3Q20A 1VQ9P 4XFXA 1Q82Q 3DS2A 2XV6A 4U0CA 4XFYA 3VRLC 3G6EP 5F2OA 5DCKA 3DS4A 2XXMA 2PEOA 2OTLP 2EFJA 3CMEP 3CCRP 3CC4P 1D1DA 3CCQP 2M8LA 1K8AQ 4U0FA 2JO0A 3G1GA 3H4EA 1Q86Q 1IUQA 4XRQA 3M1MA 2PEIA 2JYLA 1YI2P 1VQLP 3CCLP 1VQ6P 5HGLA 2QEXP 3CCJP 4XROA 3G4SP 3WBHA 1W2BO 3I56P 5I4TG 1VQPP 4COCA 1AUMA 3G29A 3CCUP 3H0DA 3G0VA 1Q81Q 1M6NA 3HZQA 1E6JP 2EG5A 2Z44A 2DGYA 1YIJP 3RG6C 3DS3A 2PEJA 1KD1Q 1YJWP 1S72P 1JJ2O 1M6EX 1YJNP 3DS5A 1KC8Q 4U0EA 4XFZA 1EOQA 3G26A 3CMAP 3I55P 1BAJA 1VQOP 1YITP 3CC2P
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2PEK A;  2Z45 A;  5BS2 A;  2PEO A;  2Z44 A;  3Q20 A;  2PEM A;  5BS1 A;  4GR6 A;  4GR2 A;  3RG6 C;  2PEJ A;  2PEN A;  2PEI A;  2PEQ A;  2PY8 A;  2Z46 A;  3HYB A; 
#chains in the Genus database with same CATH topology
 3MGE A;  3CD6 P;  3NTE A;  5HV8 A;  4H2X C;  4IPY A;  3GKL C;  4PWV B;  4U0D A;  2MD9 A;  2KOD A;  2WPT A;  1QVF O;  2EIA A;  2KG6 A;  2M8N A;  2CQ8 A;  1VQ4 P;  2QA4 P;  2L6E A;  1VQN P;  2VLO A;  4U0A A;  3CCE P;  3RG2 A;  1CEI A;  2XT1 A;  3DS0 A;  1RO2 A;  2M5R A;  1ZMB A;  1F80 D;  2K5X A;  2M8P A;  5JPA A;  2BUO A;  2PEQ A;  2PNG A;  2FQ0 A;  3CC7 P;  3DTJ A;  2JGP A;  2Z45 A;  1VQ7 P;  2VSQ A;  2K0Y A;  4PXH B;  5HVC A;  7CEI A;  1YHQ P;  2KGC A;  4QNB A;  3P05 A;  2MF4 A;  2L0Q A;  1Q82 Q;  2KOS A;  2LIU A;  2LML A;  3G6E P;  2LOL A;  2NO8 A;  4UHP B;  3DS4 A;  2XXM A;  3CME P;  3CCQ P;  2N5I A;  1EMV A;  2FVF A;  3M1M A;  2PEI A;  1VKU A;  1IMQ A;  1HY8 A;  2K0X A;  5I4T G;  1VQP P;  2KG8 A;  3GZM A;  3H0D A;  2KR5 A;  1GPJ A;  3HZQ A;  1E0H A;  2K0D X;  2DGY A;  3RG6 C;  2KOO A;  2KG9 A;  2VLN A;  1KD1 Q;  1YJW P;  1M6E X;  3G26 A;  1BAJ A;  3CC2 P;  2BHV A;  2P9X A;  5BS2 A;  2PEM A;  3CPW O;  3CXC O;  1VQM P;  2PY8 A;  5F2N A;  3GZL A;  4PH0 A;  1ZNV A;  2AFE A;  4PH1 A;  2JQ4 A;  3E2D A;  2N6Y A;  1KLP A;  2XZ1 C;  2N98 A;  2L22 A;  3LMO A;  3HYB A;  3DS1 A;  1GXG A;  2LF4 A;  1RO0 A;  2AVA A;  1N8R Q;  3U43 A;  3EJD A;  2FQ2 A;  1DNY A;  3B4Q A;  1UJZ A;  2KGD A;  2KW2 A;  2ONT A;  5HGN A;  4GR2 A;  4M0I A;  2N50 A;  3DS2 A;  2XV6 A;  2MVU A;  2N6Z A;  5DCK A;  2QNW A;  2EFJ A;  1GXH A;  5KP8 B;  3CC4 P;  4U0F A;  2JO0 A;  1VHN A;  1IUQ A;  4DG9 A;  2FAD A;  2N5H A;  3CCL P;  2KGA A;  2VLP A;  1UNK A;  2QEX P;  4XRO A;  3G4S P;  2GDY A;  3G29 A;  4BPH A;  1FR2 A;  3G0V A;  1M6N A;  2EG5 A;  2KOP A;  1YIJ P;  1JJ2 O;  1KC8 Q;  4U0E A;  3CMA P;  4XRQ A;  2FHS C;  2JAZ A;  1A43 A;  1KQS O;  1OR5 A;  1K73 Q;  1VQK P;  2KOR A;  2VLQ A;  3LRY A;  2CWO A;  1HQB A;  2FQ1 A;  2FAE A;  1L0H A;  2GDW A;  1VQ5 P;  2GZG A;  2JB0 A;  2LL8 A;  2ERH A;  2OTJ P;  3CCV P;  3CE7 A;  4WYM A;  1QRJ A;  2JU2 A;  3CCM P;  2KWL A;  3G1I A;  1BXI A;  3G71 P;  2EHT A;  2FVE A;  1M74 A;  4R0M A;  1NQ4 A;  1YJ9 P;  1VQ8 P;  5HGO A;  1EIA A;  1NJI Q;  1VQ9 P;  4XFX A;  2EHS A;  5CZD B;  2MR8 A;  3VRL C;  2PEO A;  2OTL P;  2MY5 A;  1D1D A;  4H2Y C;  2KGE A;  2L4B A;  3G1G A;  3H4E A;  5KP7 B;  2CNR A;  2JYL A;  2KOQ A;  1YI2 P;  2K94 A;  1VQL P;  3CCJ P;  2K2Q A;  2L9F A;  3I56 P;  2GZE A;  2FVA A;  4COC A;  1AUM A;  1Z6M A;  1L0I A;  2AF8 A;  2MR7 A;  2Z44 A;  2GZJ A;  2PEJ A;  1YJN P;  3DS5 A;  1EOQ A;  3I55 P;  2JU1 A;  1YIT P;  4BPF A;  4GR6 A;  1QVG O;  1IMP A;  2FAC A;  4CA3 A;  3NY7 B;  1M1K Q;  2PEK A;  3EJB A;  4HKG A;  4IZ6 A;  2GYK A;  4H2W C;  4BPG A;  5F2K A;  3DPH A;  1A8O A;  3H47 A;  3G28 A;  1K30 A;  1AYI A;  4U0B A;  5EW5 E;  2OAR A;  1M90 Q;  2LKI A;  1MZ8 A;  2JYG A;  2K93 A;  1DV5 A;  5HGM A;  2GZF A;  5BS1 A;  2CG5 B;  1AF8 A;  2CGQ A;  2MVV A;  3CCS P;  3B5I A;  1K9M Q;  2GDX A;  2X2B A;  1RNI A;  3OW2 O;  4COP A;  2PEN A;  2Z46 A;  4F37 A;  1Q7Y Q;  2AFD A;  4QKO A;  2E1M A;  3G21 A;  1T8K A;  3Q20 A;  4NEO A;  1ACP A;  4U0C A;  4XFY A;  2LIW A;  5F2O A;  2DNW A;  2ROQ A;  3CCR P;  2M8L A;  4MRT C;  1K8A Q;  1Q86 Q;  1X3O A;  2LPK A;  1VQ6 P;  5HGL A;  2GZI A;  3WBH A;  1W2B O;  3GJN A;  5EJD A;  3CCU P;  2LTE A;  1Q81 Q;  1E6J P;  3EJE A;  2XZ0 D;  3DS3 A;  1S72 P;  5KP6 B;  4XFZ A;  2K92 A;  1VQO P;  2JBG A; 
#chains in the Genus database with same CATH homology
 2BHV A;  2P9X A;  3MGE A;  5BS2 A;  3CD6 P;  1A43 A;  1KQS O;  2PEM A;  3CPW O;  3NTE A;  4GR6 A;  3CXC O;  1QVG O;  4IPY A;  1VQM P;  2PY8 A;  5F2N A;  4U0D A;  4PH0 A;  1K73 Q;  1VQK P;  4PH1 A;  1M1K Q;  2KOD A;  1QVF O;  3LRY A;  2EIA A;  2CWO A;  2PEK A;  3E2D A;  2M8N A;  1VQ5 P;  1VQ4 P;  5F2K A;  3DPH A;  1A8O A;  3H47 A;  3G28 A;  2QA4 P;  2L6E A;  1VQN P;  1K30 A;  3HYB A;  4U0A A;  4U0B A;  3CCE P;  3DS1 A;  2OTJ P;  2OAR A;  1M90 Q;  2XT1 A;  3DS0 A;  2LF4 A;  1RO2 A;  3CCV P;  1RO0 A;  4WYM A;  1N8R Q;  1ZMB A;  2JYG A;  5HGM A;  2M8P A;  5JPA A;  2BUO A;  2PEQ A;  5BS1 A;  1QRJ A;  3CCS P;  3CC7 P;  3B5I A;  3CCM P;  1K9M Q;  3DTJ A;  1RNI A;  2Z45 A;  3OW2 O;  4COP A;  3G1I A;  3G71 P;  1VQ7 P;  2ONT A;  1M74 A;  2PEN A;  2Z46 A;  5HGN A;  1Q7Y Q;  1YHQ P;  1YJ9 P;  2E1M A;  4QNB A;  3G21 A;  3P05 A;  4GR2 A;  1EIA A;  4M0I A;  5HGO A;  1VQ8 P;  1NJI Q;  3Q20 A;  1VQ9 P;  4XFX A;  1Q82 Q;  3DS2 A;  2XV6 A;  4U0C A;  4XFY A;  3VRL C;  3G6E P;  5F2O A;  5DCK A;  3DS4 A;  2XXM A;  2PEO A;  2OTL P;  2EFJ A;  3CME P;  3CCR P;  3CC4 P;  1D1D A;  3CCQ P;  2M8L A;  1K8A Q;  4U0F A;  2JO0 A;  3G1G A;  3H4E A;  1Q86 Q;  1IUQ A;  4XRQ A;  3M1M A;  2PEI A;  2JYL A;  1YI2 P;  1VQL P;  3CCL P;  1VQ6 P;  5HGL A;  2QEX P;  3CCJ P;  4XRO A;  3G4S P;  3WBH A;  1W2B O;  3I56 P;  5I4T G;  1VQP P;  4COC A;  1AUM A;  3G29 A;  3CCU P;  3H0D A;  3G0V A;  1Q81 Q;  1M6N A;  3HZQ A;  1E6J P;  2EG5 A;  2Z44 A;  2DGY A;  1YIJ P;  3RG6 C;  3DS3 A;  2PEJ A;  1KD1 Q;  1YJW P;  1S72 P;  1JJ2 O;  1M6E X;  1YJN P;  3DS5 A;  1KC8 Q;  4U0E A;  4XFZ A;  1EOQ A;  3G26 A;  3CMA P;  3I55 P;  1BAJ A;  1VQO P;  1YIT P;  3CC2 P; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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