2Z46A

Crystal structure of native-orf134
Total Genus 44
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
44
sequence length
109
structure length
109
Chain Sequence
EFKKVAKETAITLQSYLTYQAVRLISQQLSETNPGQAIWLGEFSKRHPIQESDLYLEAMMLENKELVLRILTVRENLAEGVLEFLPEMVLSQIKQSNGNHRRSLLERLT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Chaperone
molecule keywords ORF134
publication title Crystal Structure of ORF134
rcsb
source organism Synechococcus sp.
total genus 44
structure length 109
sequence length 109
chains with identical sequence B, C, D, E, F
ec nomenclature
pdb deposition date 2007-06-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02341 RcbX RbcX protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.210 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A 2z46A00
5BS2A 2Z46A 3Q20A 2Z44A 2PEIA 4GR6A 2PEOA 2PEJA 3HYBA 2PEMA 2PEQA 2PENA 3RG6C 2PY8A 4GR2A 5BS1A 2PEKA 2Z45A
chains in the Genus database with same CATH superfamily
4M0IA 3E2DA 5F2NA 2KGCA 1QRJA 3I56P 1F80D 1T8KA 3H47A 4COCA 2N50A 1M90Q 2MVUA 4MRTC 3G26A 3CCEP 2PNGA 1BAJA 1EOQA 2FQ2A 2WPTA 2FACA 1GXHA 2VLPA 1L0HA 3CCUP 2KWLA 5HGOA 2GZFA 5HGLA 2P9XA 3CXCO 3EJBA 1BXIA 1NJIQ 2CG5B 2BUOA 4U0FA 7CEIA 2GZIA 2KOSA 2NO8A 3CMEP 2JU2A 2PEMA 3G6EP 4DG9A 4F37A 2AF8A 2EFJA 2Z46A 2AFEA 1KC8Q 1NQ4A 1D1DA 2EIAA 3DS3A 1VQPP 2MVVA 1RO0A 3DPHA 3VRLC 3GZLA 4XROA 4QKOA 2QEXP 2PENA 1JJ2O 2MD9A 2FAEA 1K9MQ 1KQSO 3CCSP 3CMAP 2N5HA 5HGMA 3CPWO 1ACPA 2GYKA 2GDXA 2JYLA 1VQNP 1W2BO 3P05A 1ZMBA 2K0DX 3GZMA 1DV5A 1FR2A 2N98A 2CNRA 2MR8A 1VQ4P 2GDYA 2MY5A 2M8PA 5JPAA 4PXHB 2KR5A 3DTJA 2MF4A 1N8RQ 2LKIA 1UNKA 4BPGA 2FVFA 2JAZA 4U0AA 3U43A 3Q20A 1YI2P 3CE7A 4BPFA 2KG6A 1M6EX 2X2BA 1RNIA 2L22A 1IMPA 4WYMA 1M74A 2XZ1C 2K94A 4XFXA 1X3OA 1A43A 2GZEA 1YITP 2KGEA 3RG6C 2OARA 1YJ9P 5EJDA 3G4SP 2M5RA 3EJEA 5EW5E 2AVAA 4XFYA 2GZJA 2KGDA 1QVFO 2M8LA 2K2QA 3M1MA 3I55P 2QA4P 3CCVP 1VHNA 2GZGA 3G71P 2PEIA 3CCQP 1YJWP 2DNWA 2PEQA 1KD1Q 2KOOA 1YIJP 5CZDB 5F2KA 2LTEA 3CC2P 1EMVA 1Q86Q 2KOPA 4HKGA 4H2WC 4U0BA 5KP6B 1RO2A 1VQLP 2ONTA 2KGAA 2Z44A 1VQ5P 4IPYA 1YHQP 1MZ8A 5KP8B 3G0VA 4GR2A 1Q81Q 1VQMP 2FVEA 4R0MA 2EHTA 2JQ4A 2LPKA 2XZ0D 2N6ZA 3CCRP 3DS4A 2FVAA 3H4EA 3WBHA 2K93A 3G29A 3CD6P 4U0DA 2MR7A 4IZ6A 2KODA 4BPHA 1ZNVA 2JYGA 2K5XA 5HGNA 2OTJP 5HV8A 2PEJA 2EHSA 3HYBA 3DS1A 3MGEA 5HVCA 1HQBA 3LMOA 1AYIA 2CGQA 1QVGO 1Q82Q 2VLQA 3G28A 2K0YA 4UHPB 3CCMP 3G1IA 1Q7YQ 1VKUA 3EJDA 3LRYA 2JO0A 2LF4A 2LIUA 1AF8A 2DGYA 1GPJA 5F2OA 3B4QA 2CWOA 5BS1A 1KLPA 2PEKA 3RG2A 3HZQA 2ERHA 2FQ1A 2BHVA 3CC4P 1EIAA 2XV6A 2KG8A 1S72P 4U0EA 2Z45A 1L0IA 1AUMA 3GKLC 2EG5A 2K0XA 2XXMA 2N5IA 2ROQA 2FADA 2KOQA 3G21A 4H2YC 1K30A 1Z6MA 2M8NA 2L0QA 2FQ0A 3B5IA 1E0HA 3DS5A 1CEIA 1UJZA 3CCLP 2OTLP 5I4TG 1YJNP 2GDWA 2E1MA 2VLNA 2CQ8A 3DS2A 2PY8A 4COPA 5DCKA 2PEOA 5KP7B 3OW2O 1DNYA 2VLOA 4H2XC 4XRQA 4QNBA 3CCJP 2JB0A 1K8AQ 1VQ9P 1VQKP 2KG9A 4XFZA 1M6NA 2AFDA 2FHSC 2LL8A 2VSQA 4PWVB 4NEOA 2LOLA 1HY8A 1IMQA 1K73Q 3H0DA 1OR5A 2L6EA 4U0CA 2N6YA 2KORA 3NTEA 1A8OA 2LIWA 2JGPA 3CC7P 1IUQA 2KW2A 2QNWA 4PH1A 1VQ8P 4GR6A 2JU1A 4CA3A 2L9FA 1M1KQ 1VQOP 2LMLA 2XT1A 3GJNA 1VQ6P 3G1GA 1E6JP 2K92A 3NY7B 2L4BA 3DS0A 5BS2A 4PH0A 2JBGA 1VQ7P 1GXGA
chains in the Genus database with same CATH topology
3P05A 2ONTA 2Z44A 1ZMBA 3E2DA 4M0IA 5F2NA 4IPYA 1VQ5P 1YHQP 1W2BO 1QRJA 3I56P 3G0VA 4GR2A 1Q81Q 1VQ4P 3CCLP 2OTLP 1VQMP 5I4TG 3H47A 2M8PA 4COCA 5JPAA 1YJNP 2E1MA 3CCRP 3DS4A 3H4EA 3WBHA 3DS2A 2PY8A 3G29A 3DTJA 3CD6P 4U0DA 1N8RQ 1M90Q 4COPA 2KODA 3G26A 5DCKA 3CCEP 2PEOA 2JYGA 3OW2O 5HGNA 2OTJP 1BAJA 1EOQA 2PEJA 3HYBA 4XRQA 4QNBA 3CCJP 3DS1A 3MGEA 4U0AA 3Q20A 1K8AQ 1YI2P 1VQ9P 1VQKP 1QVGO 1M6EX 4XFZA 1Q82Q 3CCUP 1M6NA 1RNIA 3G28A 5HGOA 5HGLA 2P9XA 3CCMP 3CXCO 3G1IA 1Q7YQ 1NJIQ 4WYMA 1M74A 2BUOA 4U0FA 3LRYA 4XFXA 3CMEP 2JO0A 2LF4A 1A43A 2PEMA 1K73Q 2DGYA 3H0DA 3G6EP 5F2OA 2L6EA 4U0CA 2CWOA 5BS1A 3NTEA 1A8OA 2EFJA 2Z46A 1KC8Q 1YITP 3RG6C 1D1DA 2OARA 2EIAA 3CC7P 3DS3A 1YJ9P 2PEKA 1IUQA 3G4SP 1VQPP 3HZQA 4PH1A 1VQ8P 4GR6A 1RO0A 3DPHA 2BHVA 3CC4P 3VRLC 4XROA 1M1KQ 4XFYA 1EIAA 2QEXP 2PENA 2XV6A 2M8LA 1VQOP 1QVFO 2XT1A 1JJ2O 3M1MA 3I55P 2QA4P 3CCVP 2Z45A 4U0EA 1S72P 1AUMA 2EG5A 3G71P 2PEIA 3CCQP 1YJWP 2XXMA 1VQ6P 2PEQA 3G1GA 1E6JP 1KD1Q 1YIJP 5F2KA 1K9MQ 3CC2P 1KQSO 3G21A 1Q86Q 3CCSP 3CMAP 1K30A 3DS0A 5BS2A 5HGMA 2M8NA 3CPWO 4PH0A 4U0BA 1VQ7P 3B5IA 1RO2A 2JYLA 1VQLP 1VQNP 3DS5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5BS2 A;  2Z46 A;  3Q20 A;  2Z44 A;  2PEI A;  4GR6 A;  2PEO A;  2PEJ A;  3HYB A;  2PEM A;  2PEQ A;  2PEN A;  3RG6 C;  2PY8 A;  4GR2 A;  5BS1 A;  2PEK A;  2Z45 A; 
#chains in the Genus database with same CATH topology
 4M0I A;  3E2D A;  5F2N A;  2KGC A;  1QRJ A;  3I56 P;  1F80 D;  1T8K A;  3H47 A;  4COC A;  2N50 A;  1M90 Q;  2MVU A;  4MRT C;  3G26 A;  3CCE P;  2PNG A;  1BAJ A;  1EOQ A;  2FQ2 A;  2WPT A;  2FAC A;  1GXH A;  2VLP A;  1L0H A;  3CCU P;  2KWL A;  5HGO A;  2GZF A;  5HGL A;  2P9X A;  3CXC O;  3EJB A;  1BXI A;  1NJI Q;  2CG5 B;  2BUO A;  4U0F A;  7CEI A;  2GZI A;  2KOS A;  2NO8 A;  3CME P;  2JU2 A;  2PEM A;  3G6E P;  4DG9 A;  4F37 A;  2AF8 A;  2EFJ A;  2Z46 A;  2AFE A;  1KC8 Q;  1NQ4 A;  1D1D A;  2EIA A;  3DS3 A;  1VQP P;  2MVV A;  1RO0 A;  3DPH A;  3VRL C;  3GZL A;  4XRO A;  4QKO A;  2QEX P;  2PEN A;  1JJ2 O;  2MD9 A;  2FAE A;  1K9M Q;  1KQS O;  3CCS P;  3CMA P;  2N5H A;  5HGM A;  3CPW O;  1ACP A;  2GYK A;  2GDX A;  2JYL A;  1VQN P;  1W2B O;  3P05 A;  1ZMB A;  2K0D X;  3GZM A;  1DV5 A;  1FR2 A;  2N98 A;  2CNR A;  2MR8 A;  1VQ4 P;  2GDY A;  2MY5 A;  2M8P A;  5JPA A;  4PXH B;  2KR5 A;  3DTJ A;  2MF4 A;  1N8R Q;  2LKI A;  1UNK A;  4BPG A;  2FVF A;  2JAZ A;  4U0A A;  3U43 A;  3Q20 A;  1YI2 P;  3CE7 A;  4BPF A;  2KG6 A;  1M6E X;  2X2B A;  1RNI A;  2L22 A;  1IMP A;  4WYM A;  1M74 A;  2XZ1 C;  2K94 A;  4XFX A;  1X3O A;  1A43 A;  2GZE A;  1YIT P;  2KGE A;  3RG6 C;  2OAR A;  1YJ9 P;  5EJD A;  3G4S P;  2M5R A;  3EJE A;  5EW5 E;  2AVA A;  4XFY A;  2GZJ A;  2KGD A;  1QVF O;  2M8L A;  2K2Q A;  3M1M A;  3I55 P;  2QA4 P;  3CCV P;  1VHN A;  2GZG A;  3G71 P;  2PEI A;  3CCQ P;  1YJW P;  2DNW A;  2PEQ A;  1KD1 Q;  2KOO A;  1YIJ P;  5CZD B;  5F2K A;  2LTE A;  3CC2 P;  1EMV A;  1Q86 Q;  2KOP A;  4HKG A;  4H2W C;  4U0B A;  5KP6 B;  1RO2 A;  1VQL P;  2ONT A;  2KGA A;  2Z44 A;  1VQ5 P;  4IPY A;  1YHQ P;  1MZ8 A;  5KP8 B;  3G0V A;  4GR2 A;  1Q81 Q;  1VQM P;  2FVE A;  4R0M A;  2EHT A;  2JQ4 A;  2LPK A;  2XZ0 D;  2N6Z A;  3CCR P;  3DS4 A;  2FVA A;  3H4E A;  3WBH A;  2K93 A;  3G29 A;  3CD6 P;  4U0D A;  2MR7 A;  4IZ6 A;  2KOD A;  4BPH A;  1ZNV A;  2JYG A;  2K5X A;  5HGN A;  2OTJ P;  5HV8 A;  2PEJ A;  2EHS A;  3HYB A;  3DS1 A;  3MGE A;  5HVC A;  1HQB A;  3LMO A;  1AYI A;  2CGQ A;  1QVG O;  1Q82 Q;  2VLQ A;  3G28 A;  2K0Y A;  4UHP B;  3CCM P;  3G1I A;  1Q7Y Q;  1VKU A;  3EJD A;  3LRY A;  2JO0 A;  2LF4 A;  2LIU A;  1AF8 A;  2DGY A;  1GPJ A;  5F2O A;  3B4Q A;  2CWO A;  5BS1 A;  1KLP A;  2PEK A;  3RG2 A;  3HZQ A;  2ERH A;  2FQ1 A;  2BHV A;  3CC4 P;  1EIA A;  2XV6 A;  2KG8 A;  1S72 P;  4U0E A;  2Z45 A;  1L0I A;  1AUM A;  3GKL C;  2EG5 A;  2K0X A;  2XXM A;  2N5I A;  2ROQ A;  2FAD A;  2KOQ A;  3G21 A;  4H2Y C;  1K30 A;  1Z6M A;  2M8N A;  2L0Q A;  2FQ0 A;  3B5I A;  1E0H A;  3DS5 A;  1CEI A;  1UJZ A;  3CCL P;  2OTL P;  5I4T G;  1YJN P;  2GDW A;  2E1M A;  2VLN A;  2CQ8 A;  3DS2 A;  2PY8 A;  4COP A;  5DCK A;  2PEO A;  5KP7 B;  3OW2 O;  1DNY A;  2VLO A;  4H2X C;  4XRQ A;  4QNB A;  3CCJ P;  2JB0 A;  1K8A Q;  1VQ9 P;  1VQK P;  2KG9 A;  4XFZ A;  1M6N A;  2AFD A;  2FHS C;  2LL8 A;  2VSQ A;  4PWV B;  4NEO A;  2LOL A;  1HY8 A;  1IMQ A;  1K73 Q;  3H0D A;  1OR5 A;  2L6E A;  4U0C A;  2N6Y A;  2KOR A;  3NTE A;  1A8O A;  2LIW A;  2JGP A;  3CC7 P;  1IUQ A;  2KW2 A;  2QNW A;  4PH1 A;  1VQ8 P;  4GR6 A;  2JU1 A;  4CA3 A;  2L9F A;  1M1K Q;  1VQO P;  2LML A;  2XT1 A;  3GJN A;  1VQ6 P;  3G1G A;  1E6J P;  2K92 A;  3NY7 B;  2L4B A;  3DS0 A;  5BS2 A;  4PH0 A;  2JBG A;  1VQ7 P;  1GXG A; 
#chains in the Genus database with same CATH homology
 3P05 A;  2ONT A;  2Z44 A;  1ZMB A;  3E2D A;  4M0I A;  5F2N A;  4IPY A;  1VQ5 P;  1YHQ P;  1W2B O;  1QRJ A;  3I56 P;  3G0V A;  4GR2 A;  1Q81 Q;  1VQ4 P;  3CCL P;  2OTL P;  1VQM P;  5I4T G;  3H47 A;  2M8P A;  4COC A;  5JPA A;  1YJN P;  2E1M A;  3CCR P;  3DS4 A;  3H4E A;  3WBH A;  3DS2 A;  2PY8 A;  3G29 A;  3DTJ A;  3CD6 P;  4U0D A;  1N8R Q;  1M90 Q;  4COP A;  2KOD A;  3G26 A;  5DCK A;  3CCE P;  2PEO A;  2JYG A;  3OW2 O;  5HGN A;  2OTJ P;  1BAJ A;  1EOQ A;  2PEJ A;  3HYB A;  4XRQ A;  4QNB A;  3CCJ P;  3DS1 A;  3MGE A;  4U0A A;  3Q20 A;  1K8A Q;  1YI2 P;  1VQ9 P;  1VQK P;  1QVG O;  1M6E X;  4XFZ A;  1Q82 Q;  3CCU P;  1M6N A;  1RNI A;  3G28 A;  5HGO A;  5HGL A;  2P9X A;  3CCM P;  3CXC O;  3G1I A;  1Q7Y Q;  1NJI Q;  4WYM A;  1M74 A;  2BUO A;  4U0F A;  3LRY A;  4XFX A;  3CME P;  2JO0 A;  2LF4 A;  1A43 A;  2PEM A;  1K73 Q;  2DGY A;  3H0D A;  3G6E P;  5F2O A;  2L6E A;  4U0C A;  2CWO A;  5BS1 A;  3NTE A;  1A8O A;  2EFJ A;  2Z46 A;  1KC8 Q;  1YIT P;  3RG6 C;  1D1D A;  2OAR A;  2EIA A;  3CC7 P;  3DS3 A;  1YJ9 P;  2PEK A;  1IUQ A;  3G4S P;  1VQP P;  3HZQ A;  4PH1 A;  1VQ8 P;  4GR6 A;  1RO0 A;  3DPH A;  2BHV A;  3CC4 P;  3VRL C;  4XRO A;  1M1K Q;  4XFY A;  1EIA A;  2QEX P;  2PEN A;  2XV6 A;  2M8L A;  1VQO P;  1QVF O;  2XT1 A;  1JJ2 O;  3M1M A;  3I55 P;  2QA4 P;  3CCV P;  2Z45 A;  4U0E A;  1S72 P;  1AUM A;  2EG5 A;  3G71 P;  2PEI A;  3CCQ P;  1YJW P;  2XXM A;  1VQ6 P;  2PEQ A;  3G1G A;  1E6J P;  1KD1 Q;  1YIJ P;  5F2K A;  1K9M Q;  3CC2 P;  1KQS O;  3G21 A;  1Q86 Q;  3CCS P;  3CMA P;  1K30 A;  3DS0 A;  5BS2 A;  5HGM A;  2M8N A;  3CPW O;  4PH0 A;  4U0B A;  1VQ7 P;  3B5I A;  1RO2 A;  2JYL A;  1VQL P;  1VQN P;  3DS5 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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