2N98A

Solution structure of acyl carrier protein lipd from actinoplanes friuliensis
Total Genus 22
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
22
sequence length
90
structure length
90
Chain Sequence
GHMSDLSTAPTLDSLRVWLVDCVAGHLGLDAATIATDLPLTSYGLDSVYALSIAAELEDHLDVSLDPTLIWDHPTIDALSTALVAELRSA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural and dynamic characterization of a freestanding acyl carrier protein involved in the biosynthesis of cyclic lipopeptide antibiotics.
pubmed doi rcsb
molecule tags Transport protein
source organism Actinoplanes friuliensis
molecule keywords Acyl carrier protein
total genus 22
structure length 90
sequence length 90
ec nomenclature
pdb deposition date 2015-11-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2n98A00
2FVFA 2MVVA 2N6YA 1KLPA 2FVEA 4H2XC 4HKGA 2MD9A 2MF4A 2MVUA 2AFDA 2CG5B 5KP8B 2K93A 2K2QA 4IZ6A 1NQ4A 1T8KA 3LMOA 2AVAA 2MR8A 3CE7A 5CZDB 2FADA 4MRTC 1DV5A 2KWLA 2L9FA 2JU2A 2N50A 2XZ0D 2LPKA 1VKUA 2KGCA 2CGQA 5KP7B 2GDWA 5KP6B 2KW2A 2FAEA 2KOPA 3EJEA 5HV8A 2N5IA 2M5RA 1L0IA 2ROQA 4DG9A 2KG9A 2KGAA 2KOSA 2MY5A 2AFEA 2K94A 2JU1A 2JQ4A 2LTEA 1DNYA 2FACA 4PXHB 2XZ1C 2AF8A 2N98A 4CA3A 2EHTA 2LIUA 2CQ8A 2FHSC 2LIWA 2N6ZA 2PNGA 2CNRA 1X3OA 2K92A 3NY7B 4NEOA 4BPFA 2KORA 1HY8A 3EJBA 2KG6A 2KOOA 2QNWA 3RG2A 2FVAA 2MR7A 2KGDA 4PWVB 1AF8A 2KOQA 2LKIA 2GDYA 4BPHA 2L4BA 5EJDA 2GDXA 2KG8A 1OR5A 2EHSA 1HQBA 2L22A 2LMLA 2K0YA 2VSQA 4H2YC 2KGEA 2JGPA 5HVCA 2KR5A 2DNWA 4H2WC 4BPGA 2X2BA 1L0HA 4R0MA 2FQ1A 3GZMA 2LL8A 1F80D 2L0QA 2FQ0A 3EJDA 2K0XA 2FQ2A 1ACPA 3GZLA 2N5HA 2LOLA
chains in the Genus database with same CATH superfamily
2PEKA 5HGNA 1ZMBA 3RG6C 1VQOP 4F37A 3DS0A 1QVGO 1AYIA 2ERHA 2AFDA 2K93A 2K2QA 2GYKA 2JAZA 3LMOA 1QVFO 1YIJP 3VRLC 4PH0A 5CZDB 2FADA 3CCQP 2KWLA 1RO0A 3CPWO 2P9XA 3CD6P 1Q81Q 2DGYA 2KGCA 5KP7B 2EFJA 3DTJA 2VLQA 3Q20A 2KG9A 4U0AA 2KGAA 2K94A 2PEJA 4CA3A 2LIUA 2PNGA 2CQ8A 3CCEP 2L6EA 1EMVA 5HGMA 3I55P 2E1MA 1KC8Q 1Q86Q 3DS2A 2EIAA 2OTLP 2KG8A 5JPAA 3G29A 2K0YA 2VSQA 1KD1Q 2X2BA 3HYBA 1VQ5P 1F80D 3CCUP 2M8NA 3WBHA 4XRQA 1EOQA 3B4QA 2PENA 2XV6A 3CMEP 4WYMA 2FVFA 2GZGA 2MVVA 5F2OA 2Z44A 2N6YA 4H2XC 4HKGA 2MVUA 2PEOA 3MGEA 5KP8B 4IZ6A 2Z45A 1T8KA 1K8AQ 1UJZA 1VQMP 2JO0A 2KODA 1VQ6P 1MZ8A 3CMAP 2JU2A 3HZQA 1N8RQ 2N50A 4COPA 1ZNVA 1VKUA 2LPKA 2BUOA 1FR2A 1QRJA 2KOPA 4COCA 3DS4A 2N5IA 4UHPB 3G21A 1M6NA 1L0IA 2ROQA 2MY5A 2XXMA 2AFEA 2JQ4A 2LTEA 5F2NA 1Q7YQ 2N98A 2PEQA 3CCJP 1GXHA 2LIWA 2N6ZA 2OTJP 2CNRA 3E2DA 3OW2O 3CCSP 5BS2A 1YHQP 1HY8A 3EJBA 3GKLC 3G6EP 4XFZA 3LRYA 2QNWA 3RG2A 2GZIA 2MR7A 4PWVB 1JJ2O 1VQ9P 2GDYA 1CEIA 2L4BA 2PEIA 1BXIA 4QNBA 2QEXP 1Z6MA 2JGPA 5HVCA 2DNWA 1K73Q 3CCLP 2VLOA 3U43A 4BPGA 3P05A 1M90Q 1L0HA 4R0MA 2FQ1A 2LL8A 3DPHA 2FQ0A 2FQ2A 1ACPA 3GZLA 4GR2A 2LOLA 1Q82Q 3G0VA 2JBGA 1VQNP 1KLPA 1A43A 2CG5B 4XFXA 2EG5A 2M8LA 2MR8A 2PY8A 3H47A 1DV5A 1EIAA 1A8OA 1IUQA 5EW5E 2XZ0D 2ONTA 3GJNA 2WPTA 1BAJA 2CGQA 1KQSO 2KW2A 3EJEA 5HV8A 3DS3A 4U0BA 2M5RA 3CC2P 4DG9A 2M8PA 2KOSA 2JU1A 3CCMP 1E6JP 1DNYA 2FACA 2XZ1C 5F2KA 4GR6A 2EHTA 2XT1A 1NJIQ 1VQ7P 1UNKA 3CXCO 1E0HA 4U0FA 2K92A 1W2BO 3NY7B 4NEOA 2K5XA 2VLNA 5DCKA 5BS1A 2JYGA 5HGOA 3G1IA 4QKOA 3CCRP 2KOOA 2KOQA 4BPHA 2GDXA 3CC4P 1OR5A 1HQBA 2JYLA 2L22A 5HGLA 3H0DA 2K0DX 4XROA 2BHVA 2KR5A 4H2WC 3CC7P 4M0IA 3GZMA 4PH1A 3EJDA 1YJNP 2K0XA 3G1GA 2VLPA 3H4EA 2N5HA 1YITP 2FVEA 1IMPA 3DS5A 4XFYA 2MD9A 2MF4A 1YJ9P 1NQ4A 2AVAA 3CE7A 3M1MA 4MRTC 1GXGA 1RNIA 1M74A 1M6EX 1VHNA 1VQPP 2CWOA 2L9FA 1M1KQ 1YJWP 5I4TG 2NO8A 3CCVP 2GDWA 5KP6B 2QA4P 2FAEA 3G4SP 2PEMA 1VQ4P 1IMQA 4PXHB 2AF8A 3NTEA 2FHSC 1YI2P 1X3OA 3G26A 3G28A 4BPFA 2GZEA 2KORA 2GZJA 4U0DA 4U0CA 2KG6A 2JB0A 1VQKP 2FVAA 2KGDA 1AF8A 2LKIA 2GZFA 2OARA 1GPJA 5EJDA 2EHSA 2LMLA 1VQ8P 4H2YC 2KGEA 3B5IA 1VQLP 3I56P 1S72P 2L0QA 2LF4A 4U0EA 3G71P 1D1DA 4IPYA 1K30A 3DS1A 1K9MQ 1RO2A 1AUMA 7CEIA 2Z46A
chains in the Genus database with same CATH topology
2FVFA 2MVVA 2N6YA 1KLPA 2FVEA 4H2XC 4HKGA 2MD9A 2MF4A 2MVUA 2AFDA 2CG5B 5KP8B 2K93A 2K2QA 4IZ6A 1NQ4A 1T8KA 3LMOA 2AVAA 2MR8A 3CE7A 5CZDB 2FADA 4MRTC 1DV5A 2KWLA 2L9FA 2JU2A 2N50A 2XZ0D 2LPKA 1VKUA 2KGCA 2CGQA 5KP7B 2GDWA 5KP6B 2KW2A 2FAEA 2KOPA 3EJEA 5HV8A 2N5IA 2M5RA 1L0IA 2ROQA 4DG9A 2KG9A 2KGAA 2KOSA 2MY5A 2AFEA 2K94A 2JU1A 2JQ4A 2LTEA 1DNYA 2FACA 4PXHB 2XZ1C 2AF8A 2N98A 4CA3A 2EHTA 2LIUA 2CQ8A 2FHSC 2LIWA 2N6ZA 2PNGA 2CNRA 1X3OA 2K92A 3NY7B 4NEOA 4BPFA 2KORA 1HY8A 3EJBA 2KG6A 2KOOA 2QNWA 3RG2A 2FVAA 2MR7A 2KGDA 4PWVB 1AF8A 2KOQA 2LKIA 2GDYA 4BPHA 2L4BA 5EJDA 2GDXA 2KG8A 1OR5A 2EHSA 1HQBA 2L22A 2LMLA 2K0YA 2VSQA 4H2YC 2KGEA 2JGPA 5HVCA 2KR5A 2DNWA 4H2WC 4BPGA 2X2BA 1L0HA 4R0MA 2FQ1A 3GZMA 2LL8A 1F80D 2L0QA 2FQ0A 3EJDA 2K0XA 2FQ2A 1ACPA 3GZLA 2N5HA 2LOLA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2FVF A;  2MVV A;  2N6Y A;  1KLP A;  2FVE A;  4H2X C;  4HKG A;  2MD9 A;  2MF4 A;  2MVU A;  2AFD A;  2CG5 B;  5KP8 B;  2K93 A;  2K2Q A;  4IZ6 A;  1NQ4 A;  1T8K A;  3LMO A;  2AVA A;  2MR8 A;  3CE7 A;  5CZD B;  2FAD A;  4MRT C;  1DV5 A;  2KWL A;  2L9F A;  2JU2 A;  2N50 A;  2XZ0 D;  2LPK A;  1VKU A;  2KGC A;  2CGQ A;  5KP7 B;  2GDW A;  5KP6 B;  2KW2 A;  2FAE A;  2KOP A;  3EJE A;  5HV8 A;  2N5I A;  2M5R A;  1L0I A;  2ROQ A;  4DG9 A;  2KG9 A;  2KGA A;  2KOS A;  2MY5 A;  2AFE A;  2K94 A;  2JU1 A;  2JQ4 A;  2LTE A;  1DNY A;  2FAC A;  4PXH B;  2XZ1 C;  2AF8 A;  2N98 A;  4CA3 A;  2EHT A;  2LIU A;  2CQ8 A;  2FHS C;  2LIW A;  2N6Z A;  2PNG A;  2CNR A;  1X3O A;  2K92 A;  3NY7 B;  4NEO A;  4BPF A;  2KOR A;  1HY8 A;  3EJB A;  2KG6 A;  2KOO A;  2QNW A;  3RG2 A;  2FVA A;  2MR7 A;  2KGD A;  4PWV B;  1AF8 A;  2KOQ A;  2LKI A;  2GDY A;  4BPH A;  2L4B A;  5EJD A;  2GDX A;  2KG8 A;  1OR5 A;  2EHS A;  1HQB A;  2L22 A;  2LML A;  2K0Y A;  2VSQ A;  4H2Y C;  2KGE A;  2JGP A;  5HVC A;  2KR5 A;  2DNW A;  4H2W C;  4BPG A;  2X2B A;  1L0H A;  4R0M A;  2FQ1 A;  3GZM A;  2LL8 A;  1F80 D;  2L0Q A;  2FQ0 A;  3EJD A;  2K0X A;  2FQ2 A;  1ACP A;  3GZL A;  2N5H A;  2LOL A; 
#chains in the Genus database with same CATH topology
 2PEK A;  5HGN A;  1ZMB A;  3RG6 C;  1VQO P;  4F37 A;  3DS0 A;  1QVG O;  1AYI A;  2ERH A;  2AFD A;  2K93 A;  2K2Q A;  2GYK A;  2JAZ A;  3LMO A;  1QVF O;  1YIJ P;  3VRL C;  4PH0 A;  5CZD B;  2FAD A;  3CCQ P;  2KWL A;  1RO0 A;  3CPW O;  2P9X A;  3CD6 P;  1Q81 Q;  2DGY A;  2KGC A;  5KP7 B;  2EFJ A;  3DTJ A;  2VLQ A;  3Q20 A;  2KG9 A;  4U0A A;  2KGA A;  2K94 A;  2PEJ A;  4CA3 A;  2LIU A;  2PNG A;  2CQ8 A;  3CCE P;  2L6E A;  1EMV A;  5HGM A;  3I55 P;  2E1M A;  1KC8 Q;  1Q86 Q;  3DS2 A;  2EIA A;  2OTL P;  2KG8 A;  5JPA A;  3G29 A;  2K0Y A;  2VSQ A;  1KD1 Q;  2X2B A;  3HYB A;  1VQ5 P;  1F80 D;  3CCU P;  2M8N A;  3WBH A;  4XRQ A;  1EOQ A;  3B4Q A;  2PEN A;  2XV6 A;  3CME P;  4WYM A;  2FVF A;  2GZG A;  2MVV A;  5F2O A;  2Z44 A;  2N6Y A;  4H2X C;  4HKG A;  2MVU A;  2PEO A;  3MGE A;  5KP8 B;  4IZ6 A;  2Z45 A;  1T8K A;  1K8A Q;  1UJZ A;  1VQM P;  2JO0 A;  2KOD A;  1VQ6 P;  1MZ8 A;  3CMA P;  2JU2 A;  3HZQ A;  1N8R Q;  2N50 A;  4COP A;  1ZNV A;  1VKU A;  2LPK A;  2BUO A;  1FR2 A;  1QRJ A;  2KOP A;  4COC A;  3DS4 A;  2N5I A;  4UHP B;  3G21 A;  1M6N A;  1L0I A;  2ROQ A;  2MY5 A;  2XXM A;  2AFE A;  2JQ4 A;  2LTE A;  5F2N A;  1Q7Y Q;  2N98 A;  2PEQ A;  3CCJ P;  1GXH A;  2LIW A;  2N6Z A;  2OTJ P;  2CNR A;  3E2D A;  3OW2 O;  3CCS P;  5BS2 A;  1YHQ P;  1HY8 A;  3EJB A;  3GKL C;  3G6E P;  4XFZ A;  3LRY A;  2QNW A;  3RG2 A;  2GZI A;  2MR7 A;  4PWV B;  1JJ2 O;  1VQ9 P;  2GDY A;  1CEI A;  2L4B A;  2PEI A;  1BXI A;  4QNB A;  2QEX P;  1Z6M A;  2JGP A;  5HVC A;  2DNW A;  1K73 Q;  3CCL P;  2VLO A;  3U43 A;  4BPG A;  3P05 A;  1M90 Q;  1L0H A;  4R0M A;  2FQ1 A;  2LL8 A;  3DPH A;  2FQ0 A;  2FQ2 A;  1ACP A;  3GZL A;  4GR2 A;  2LOL A;  1Q82 Q;  3G0V A;  2JBG A;  1VQN P;  1KLP A;  1A43 A;  2CG5 B;  4XFX A;  2EG5 A;  2M8L A;  2MR8 A;  2PY8 A;  3H47 A;  1DV5 A;  1EIA A;  1A8O A;  1IUQ A;  5EW5 E;  2XZ0 D;  2ONT A;  3GJN A;  2WPT A;  1BAJ A;  2CGQ A;  1KQS O;  2KW2 A;  3EJE A;  5HV8 A;  3DS3 A;  4U0B A;  2M5R A;  3CC2 P;  4DG9 A;  2M8P A;  2KOS A;  2JU1 A;  3CCM P;  1E6J P;  1DNY A;  2FAC A;  2XZ1 C;  5F2K A;  4GR6 A;  2EHT A;  2XT1 A;  1NJI Q;  1VQ7 P;  1UNK A;  3CXC O;  1E0H A;  4U0F A;  2K92 A;  1W2B O;  3NY7 B;  4NEO A;  2K5X A;  2VLN A;  5DCK A;  5BS1 A;  2JYG A;  5HGO A;  3G1I A;  4QKO A;  3CCR P;  2KOO A;  2KOQ A;  4BPH A;  2GDX A;  3CC4 P;  1OR5 A;  1HQB A;  2JYL A;  2L22 A;  5HGL A;  3H0D A;  2K0D X;  4XRO A;  2BHV A;  2KR5 A;  4H2W C;  3CC7 P;  4M0I A;  3GZM A;  4PH1 A;  3EJD A;  1YJN P;  2K0X A;  3G1G A;  2VLP A;  3H4E A;  2N5H A;  1YIT P;  2FVE A;  1IMP A;  3DS5 A;  4XFY A;  2MD9 A;  2MF4 A;  1YJ9 P;  1NQ4 A;  2AVA A;  3CE7 A;  3M1M A;  4MRT C;  1GXG A;  1RNI A;  1M74 A;  1M6E X;  1VHN A;  1VQP P;  2CWO A;  2L9F A;  1M1K Q;  1YJW P;  5I4T G;  2NO8 A;  3CCV P;  2GDW A;  5KP6 B;  2QA4 P;  2FAE A;  3G4S P;  2PEM A;  1VQ4 P;  1IMQ A;  4PXH B;  2AF8 A;  3NTE A;  2FHS C;  1YI2 P;  1X3O A;  3G26 A;  3G28 A;  4BPF A;  2GZE A;  2KOR A;  2GZJ A;  4U0D A;  4U0C A;  2KG6 A;  2JB0 A;  1VQK P;  2FVA A;  2KGD A;  1AF8 A;  2LKI A;  2GZF A;  2OAR A;  1GPJ A;  5EJD A;  2EHS A;  2LML A;  1VQ8 P;  4H2Y C;  2KGE A;  3B5I A;  1VQL P;  3I56 P;  1S72 P;  2L0Q A;  2LF4 A;  4U0E A;  3G71 P;  1D1D A;  4IPY A;  1K30 A;  3DS1 A;  1K9M Q;  1RO2 A;  1AUM A;  7CEI A;  2Z46 A; 
#chains in the Genus database with same CATH homology
 2FVF A;  2MVV A;  2N6Y A;  1KLP A;  2FVE A;  4H2X C;  4HKG A;  2MD9 A;  2MF4 A;  2MVU A;  2AFD A;  2CG5 B;  5KP8 B;  2K93 A;  2K2Q A;  4IZ6 A;  1NQ4 A;  1T8K A;  3LMO A;  2AVA A;  2MR8 A;  3CE7 A;  5CZD B;  2FAD A;  4MRT C;  1DV5 A;  2KWL A;  2L9F A;  2JU2 A;  2N50 A;  2XZ0 D;  2LPK A;  1VKU A;  2KGC A;  2CGQ A;  5KP7 B;  2GDW A;  5KP6 B;  2KW2 A;  2FAE A;  2KOP A;  3EJE A;  5HV8 A;  2N5I A;  2M5R A;  1L0I A;  2ROQ A;  4DG9 A;  2KG9 A;  2KGA A;  2KOS A;  2MY5 A;  2AFE A;  2K94 A;  2JU1 A;  2JQ4 A;  2LTE A;  1DNY A;  2FAC A;  4PXH B;  2XZ1 C;  2AF8 A;  2N98 A;  4CA3 A;  2EHT A;  2LIU A;  2CQ8 A;  2FHS C;  2LIW A;  2N6Z A;  2PNG A;  2CNR A;  1X3O A;  2K92 A;  3NY7 B;  4NEO A;  4BPF A;  2KOR A;  1HY8 A;  3EJB A;  2KG6 A;  2KOO A;  2QNW A;  3RG2 A;  2FVA A;  2MR7 A;  2KGD A;  4PWV B;  1AF8 A;  2KOQ A;  2LKI A;  2GDY A;  4BPH A;  2L4B A;  5EJD A;  2GDX A;  2KG8 A;  1OR5 A;  2EHS A;  1HQB A;  2L22 A;  2LML A;  2K0Y A;  2VSQ A;  4H2Y C;  2KGE A;  2JGP A;  5HVC A;  2KR5 A;  2DNW A;  4H2W C;  4BPG A;  2X2B A;  1L0H A;  4R0M A;  2FQ1 A;  3GZM A;  2LL8 A;  1F80 D;  2L0Q A;  2FQ0 A;  3EJD A;  2K0X A;  2FQ2 A;  1ACP A;  3GZL A;  2N5H A;  2LOL A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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