2LTEA

Solution nmr structure of the specialized acyl carrier protein pa3334 (apo) from pseudomonas aeruginosa, northeast structural genomics consortium target pat415
Total Genus 21
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
21
sequence length
103
structure length
103
Chain Sequence
MGSSHDHHHHSSGRENLYFQGHMPNDMEDHLLTVLSVASGVPKEEISRDSRMEDLAFDSLVVSELSLKLRKEFGVTGVDDELDLLETVDELFQLVEKHRAAGS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Specialized acyl carrier protein
publication title Solution NMR structure of the specialized acyl carrier protein PA3334 (apo) from Pseudomonas aeruginosa. Northeast Structural Genomics Consortium Target PaT415.
rcsb
source organism Pseudomonas aeruginosa
molecule tags Transferase
total genus 21
structure length 103
sequence length 103
ec nomenclature
pdb deposition date 2012-05-18
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2lteA00
1VKUA 2L0QA 2K93A 4CA3A 2CG5B 2GDYA 2K94A 2K0YA 2KG8A 3CE7A 2KGAA 2K2QA 2EHTA 2MD9A 1ACPA 2LIWA 2N50A 2L4BA 2KOOA 2MVVA 3GZMA 2MVUA 4DG9A 1OR5A 1X3OA 1HY8A 2AVAA 1AF8A 2VSQA 2CQ8A 3EJBA 2JU2A 2M5RA 2LL8A 1DV5A 2KOSA 3LMOA 2AFDA 2KOQA 5EJDA 2JU1A 2ROQA 2K92A 3RG2A 2N6YA 2LKIA 2FADA 2KGDA 2MR8A 5KP8B 4PWVB 5HVCA 2KGEA 2FVEA 2AF8A 1L0IA 2EHSA 2GDWA 5CZDB 2X2BA 2N6ZA 3EJEA 4IZ6A 2AFEA 1T8KA 2LOLA 2MF4A 2KORA 2K0XA 2LIUA 2LPKA 4NEOA 2FQ1A 2PNGA 5HV8A 5KP7B 3EJDA 2KWLA 2FHSC 1L0HA 2N5HA 2KR5A 4BPHA 2FVAA 1HQBA 2KG6A 2KG9A 2CGQA 2FAEA 4R0MA 2XZ1C 2FACA 2KW2A 4H2WC 2DNWA 2FQ0A 2KOPA 2JQ4A 4BPGA 2XZ0D 1F80D 4H2XC 2N98A 2L9FA 2JGPA 3GZLA 5KP6B 2N5IA 4PXHB 1DNYA 2L22A 4BPFA 2MY5A 1NQ4A 4MRTC 2CNRA 1KLPA 2QNWA 2FQ2A 2KGCA 3NY7B 2GDXA 4HKGA 4H2YC 2LTEA 2MR7A 2LMLA 2FVFA
chains in the Genus database with same CATH superfamily
4CA3A 2EG5A 2KGAA 3LRYA 1YJWP 1K8AQ 2MD9A 1ACPA 3GJNA 2MVVA 2MVUA 1EIAA 1Q86Q 2VLPA 3HZQA 2VSQA 3G0VA 2CQ8A 2JYGA 2M5RA 2KOSA 3G1GA 2AFDA 4QNBA 2ROQA 3CCJP 3RG2A 1VQLP 3B5IA 5HVCA 2KGEA 2EHSA 1L0IA 1JJ2O 5CZDB 3G1IA 2X2BA 2PEJA 1QRJA 3CCUP 2JYLA 3G26A 1QVFO 2AFEA 1T8KA 2LOLA 2PEOA 2GZEA 2CWOA 3CMEP 2PEMA 2GYKA 2LIUA 4NEOA 4U0FA 2KWLA 5HGOA 1YI2P 2N5HA 2FVAA 1K9MQ 5HGNA 5HGLA 1EMVA 2CGQA 2FAEA 1MZ8A 1FR2A 3MGEA 2JQ4A 1YITP 4WYMA 1D1DA 2BUOA 3VRLC 5KP6B 2K5XA 2Z44A 1IMPA 3CCRP 2QNWA 3NY7B 1M6EX 3G6EP 3DS2A 1QVGO 3CCEP 2LTEA 2OTJP 7CEIA 1VKUA 2ERHA 2K93A 2CG5B 4XFZA 3CPWO 4IPYA 2K0YA 1AYIA 2K2QA 2EHTA 1RO0A 2Z46A 2LIWA 1BAJA 2L4BA 3Q20A 2M8NA 3H47A 3CMAP 2VLNA 1RO2A 2AVAA 1EOQA 3H0DA 2JU2A 4GR6A 2LL8A 1VQ4P 4COPA 2GZFA 3LMOA 3CCVP 3DS1A 1YJ9P 5KP8B 1A43A 2FVEA 2PY8A 1A8OA 2AF8A 4M0IA 2GDWA 2XXMA 1KD1Q 2DGYA 4IZ6A 2LF4A 4XROA 3OW2O 3DS5A 3CCMP 2XV6A 1KC8Q 2KORA 1W2BO 3U43A 2K0XA 2EIAA 2OARA 2FQ1A 4UHPB 3RG6C 1Z6MA 3EJDA 1S72P 3P05A 4BPHA 1HQBA 2BHVA 3CXCO 2KG9A 3CCLP 2PEIA 2Z45A 2L6EA 3DPHA 2XZ1C 3GKLC 1YIJP 2DNWA 1Q82Q 2KOPA 2WPTA 3G71P 3B4QA 5BS1A 1F80D 2L9FA 4F37A 4PXHB 4BPFA 1CEIA 2PEKA 1AUMA 1KLPA 1IMQA 2XT1A 5F2OA 1ZMBA 5I4TG 2ONTA 1E0HA 1GXHA 2N50A 5JPAA 4DG9A 2JB0A 1X3OA 4U0BA 1HY8A 5HGMA 1VQMP 5EW5E 4XRQA 3EJBA 1DV5A 3CC7P 1VQ6P 2KOQA 4XFYA 5EJDA 1YHQP 2VLOA 2LKIA 2FADA 1RNIA 2KGDA 2MR8A 1BXIA 1K30A 2QA4P 3CCQP 1GXGA 2N6ZA 2GZJA 3EJEA 3DS3A 4U0CA 2LPKA 3DS4A 1UNKA 2PNGA 1VQ8P 4PH0A 3HYBA 4PH1A 5HV8A 5KP7B 5F2NA 2FHSC 1L0HA 1VQ5P 2KODA 2KG6A 3H4EA 4R0MA 4H2WC 2FQ0A 2K0DX 3CCSP 4U0DA 4U0EA 2XZ0D 2P9XA 2JAZA 3GZLA 1UJZA 1Q81Q 2GZIA 2M8PA 2N5IA 3M1MA 2NO8A 3G4SP 3DTJA 3NTEA 4QKOA 3CC4P 2MY5A 1NQ4A 4MRTC 2CNRA 1M1KQ 3WBHA 1VQPP 4HKGA 2E1MA 2PEQA 5DCKA 2M8LA 1E6JP 2FVFA 2L0QA 4GR2A 3CC2P 2EFJA 2GDYA 2K94A 1M74A 5F2KA 3DS0A 2KG8A 3CE7A 2QEXP 2VLQA 4U0AA 1VQNP 2KOOA 3GZMA 1OR5A 3G21A 1AF8A 1M6NA 2GZGA 2JBGA 2JU1A 2K92A 2N6YA 4PWVB 1M90Q 1VQ9P 1IUQA 3G29A 3G28A 2JO0A 4XFXA 1K73Q 1VHNA 2PENA 2MF4A 1Q7YQ 1NJIQ 2KR5A 4COCA 3I56P 1GPJA 2FACA 2KW2A 3I55P 1YJNP 1KQSO 1VQKP 2OTLP 4BPGA 3CD6P 4H2XC 2N98A 1VQ7P 2JGPA 1VQOP 1DNYA 2L22A 1ZNVA 5BS2A 3E2DA 2FQ2A 2KGCA 2GDXA 4H2YC 1N8RQ 2MR7A 2LMLA
chains in the Genus database with same CATH topology
1VKUA 2L0QA 2K93A 4CA3A 2CG5B 2GDYA 2K94A 2K0YA 2KG8A 3CE7A 2KGAA 2K2QA 2EHTA 2MD9A 1ACPA 2LIWA 2N50A 2L4BA 2KOOA 2MVVA 3GZMA 2MVUA 4DG9A 1OR5A 1X3OA 1HY8A 2AVAA 1AF8A 2VSQA 2CQ8A 3EJBA 2JU2A 2M5RA 2LL8A 1DV5A 2KOSA 3LMOA 2AFDA 2KOQA 5EJDA 2JU1A 2ROQA 2K92A 3RG2A 2N6YA 2LKIA 2FADA 2KGDA 2MR8A 5KP8B 4PWVB 5HVCA 2KGEA 2FVEA 2AF8A 1L0IA 2EHSA 2GDWA 5CZDB 2X2BA 2N6ZA 3EJEA 4IZ6A 2AFEA 1T8KA 2LOLA 2MF4A 2KORA 2K0XA 2LIUA 2LPKA 4NEOA 2FQ1A 2PNGA 5HV8A 5KP7B 3EJDA 2KWLA 2FHSC 1L0HA 2N5HA 2KR5A 4BPHA 2FVAA 1HQBA 2KG6A 2KG9A 2CGQA 2FAEA 4R0MA 2XZ1C 2FACA 2KW2A 4H2WC 2DNWA 2FQ0A 2KOPA 2JQ4A 4BPGA 2XZ0D 1F80D 4H2XC 2N98A 2L9FA 2JGPA 3GZLA 5KP6B 2N5IA 4PXHB 1DNYA 2L22A 4BPFA 2MY5A 1NQ4A 4MRTC 2CNRA 1KLPA 2QNWA 2FQ2A 2KGCA 3NY7B 2GDXA 4HKGA 4H2YC 2LTEA 2MR7A 2LMLA 2FVFA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1VKU A;  2L0Q A;  2K93 A;  4CA3 A;  2CG5 B;  2GDY A;  2K94 A;  2K0Y A;  2KG8 A;  3CE7 A;  2KGA A;  2K2Q A;  2EHT A;  2MD9 A;  1ACP A;  2LIW A;  2N50 A;  2L4B A;  2KOO A;  2MVV A;  3GZM A;  2MVU A;  4DG9 A;  1OR5 A;  1X3O A;  1HY8 A;  2AVA A;  1AF8 A;  2VSQ A;  2CQ8 A;  3EJB A;  2JU2 A;  2M5R A;  2LL8 A;  1DV5 A;  2KOS A;  3LMO A;  2AFD A;  2KOQ A;  5EJD A;  2JU1 A;  2ROQ A;  2K92 A;  3RG2 A;  2N6Y A;  2LKI A;  2FAD A;  2KGD A;  2MR8 A;  5KP8 B;  4PWV B;  5HVC A;  2KGE A;  2FVE A;  2AF8 A;  1L0I A;  2EHS A;  2GDW A;  5CZD B;  2X2B A;  2N6Z A;  3EJE A;  4IZ6 A;  2AFE A;  1T8K A;  2LOL A;  2MF4 A;  2KOR A;  2K0X A;  2LIU A;  2LPK A;  4NEO A;  2FQ1 A;  2PNG A;  5HV8 A;  5KP7 B;  3EJD A;  2KWL A;  2FHS C;  1L0H A;  2N5H A;  2KR5 A;  4BPH A;  2FVA A;  1HQB A;  2KG6 A;  2KG9 A;  2CGQ A;  2FAE A;  4R0M A;  2XZ1 C;  2FAC A;  2KW2 A;  4H2W C;  2DNW A;  2FQ0 A;  2KOP A;  2JQ4 A;  4BPG A;  2XZ0 D;  1F80 D;  4H2X C;  2N98 A;  2L9F A;  2JGP A;  3GZL A;  5KP6 B;  2N5I A;  4PXH B;  1DNY A;  2L22 A;  4BPF A;  2MY5 A;  1NQ4 A;  4MRT C;  2CNR A;  1KLP A;  2QNW A;  2FQ2 A;  2KGC A;  3NY7 B;  2GDX A;  4HKG A;  4H2Y C;  2LTE A;  2MR7 A;  2LML A;  2FVF A; 
#chains in the Genus database with same CATH topology
 4CA3 A;  2EG5 A;  2KGA A;  3LRY A;  1YJW P;  1K8A Q;  2MD9 A;  1ACP A;  3GJN A;  2MVV A;  2MVU A;  1EIA A;  1Q86 Q;  2VLP A;  3HZQ A;  2VSQ A;  3G0V A;  2CQ8 A;  2JYG A;  2M5R A;  2KOS A;  3G1G A;  2AFD A;  4QNB A;  2ROQ A;  3CCJ P;  3RG2 A;  1VQL P;  3B5I A;  5HVC A;  2KGE A;  2EHS A;  1L0I A;  1JJ2 O;  5CZD B;  3G1I A;  2X2B A;  2PEJ A;  1QRJ A;  3CCU P;  2JYL A;  3G26 A;  1QVF O;  2AFE A;  1T8K A;  2LOL A;  2PEO A;  2GZE A;  2CWO A;  3CME P;  2PEM A;  2GYK A;  2LIU A;  4NEO A;  4U0F A;  2KWL A;  5HGO A;  1YI2 P;  2N5H A;  2FVA A;  1K9M Q;  5HGN A;  5HGL A;  1EMV A;  2CGQ A;  2FAE A;  1MZ8 A;  1FR2 A;  3MGE A;  2JQ4 A;  1YIT P;  4WYM A;  1D1D A;  2BUO A;  3VRL C;  5KP6 B;  2K5X A;  2Z44 A;  1IMP A;  3CCR P;  2QNW A;  3NY7 B;  1M6E X;  3G6E P;  3DS2 A;  1QVG O;  3CCE P;  2LTE A;  2OTJ P;  7CEI A;  1VKU A;  2ERH A;  2K93 A;  2CG5 B;  4XFZ A;  3CPW O;  4IPY A;  2K0Y A;  1AYI A;  2K2Q A;  2EHT A;  1RO0 A;  2Z46 A;  2LIW A;  1BAJ A;  2L4B A;  3Q20 A;  2M8N A;  3H47 A;  3CMA P;  2VLN A;  1RO2 A;  2AVA A;  1EOQ A;  3H0D A;  2JU2 A;  4GR6 A;  2LL8 A;  1VQ4 P;  4COP A;  2GZF A;  3LMO A;  3CCV P;  3DS1 A;  1YJ9 P;  5KP8 B;  1A43 A;  2FVE A;  2PY8 A;  1A8O A;  2AF8 A;  4M0I A;  2GDW A;  2XXM A;  1KD1 Q;  2DGY A;  4IZ6 A;  2LF4 A;  4XRO A;  3OW2 O;  3DS5 A;  3CCM P;  2XV6 A;  1KC8 Q;  2KOR A;  1W2B O;  3U43 A;  2K0X A;  2EIA A;  2OAR A;  2FQ1 A;  4UHP B;  3RG6 C;  1Z6M A;  3EJD A;  1S72 P;  3P05 A;  4BPH A;  1HQB A;  2BHV A;  3CXC O;  2KG9 A;  3CCL P;  2PEI A;  2Z45 A;  2L6E A;  3DPH A;  2XZ1 C;  3GKL C;  1YIJ P;  2DNW A;  1Q82 Q;  2KOP A;  2WPT A;  3G71 P;  3B4Q A;  5BS1 A;  1F80 D;  2L9F A;  4F37 A;  4PXH B;  4BPF A;  1CEI A;  2PEK A;  1AUM A;  1KLP A;  1IMQ A;  2XT1 A;  5F2O A;  1ZMB A;  5I4T G;  2ONT A;  1E0H A;  1GXH A;  2N50 A;  5JPA A;  4DG9 A;  2JB0 A;  1X3O A;  4U0B A;  1HY8 A;  5HGM A;  1VQM P;  5EW5 E;  4XRQ A;  3EJB A;  1DV5 A;  3CC7 P;  1VQ6 P;  2KOQ A;  4XFY A;  5EJD A;  1YHQ P;  2VLO A;  2LKI A;  2FAD A;  1RNI A;  2KGD A;  2MR8 A;  1BXI A;  1K30 A;  2QA4 P;  3CCQ P;  1GXG A;  2N6Z A;  2GZJ A;  3EJE A;  3DS3 A;  4U0C A;  2LPK A;  3DS4 A;  1UNK A;  2PNG A;  1VQ8 P;  4PH0 A;  3HYB A;  4PH1 A;  5HV8 A;  5KP7 B;  5F2N A;  2FHS C;  1L0H A;  1VQ5 P;  2KOD A;  2KG6 A;  3H4E A;  4R0M A;  4H2W C;  2FQ0 A;  2K0D X;  3CCS P;  4U0D A;  4U0E A;  2XZ0 D;  2P9X A;  2JAZ A;  3GZL A;  1UJZ A;  1Q81 Q;  2GZI A;  2M8P A;  2N5I A;  3M1M A;  2NO8 A;  3G4S P;  3DTJ A;  3NTE A;  4QKO A;  3CC4 P;  2MY5 A;  1NQ4 A;  4MRT C;  2CNR A;  1M1K Q;  3WBH A;  1VQP P;  4HKG A;  2E1M A;  2PEQ A;  5DCK A;  2M8L A;  1E6J P;  2FVF A;  2L0Q A;  4GR2 A;  3CC2 P;  2EFJ A;  2GDY A;  2K94 A;  1M74 A;  5F2K A;  3DS0 A;  2KG8 A;  3CE7 A;  2QEX P;  2VLQ A;  4U0A A;  1VQN P;  2KOO A;  3GZM A;  1OR5 A;  3G21 A;  1AF8 A;  1M6N A;  2GZG A;  2JBG A;  2JU1 A;  2K92 A;  2N6Y A;  4PWV B;  1M90 Q;  1VQ9 P;  1IUQ A;  3G29 A;  3G28 A;  2JO0 A;  4XFX A;  1K73 Q;  1VHN A;  2PEN A;  2MF4 A;  1Q7Y Q;  1NJI Q;  2KR5 A;  4COC A;  3I56 P;  1GPJ A;  2FAC A;  2KW2 A;  3I55 P;  1YJN P;  1KQS O;  1VQK P;  2OTL P;  4BPG A;  3CD6 P;  4H2X C;  2N98 A;  1VQ7 P;  2JGP A;  1VQO P;  1DNY A;  2L22 A;  1ZNV A;  5BS2 A;  3E2D A;  2FQ2 A;  2KGC A;  2GDX A;  4H2Y C;  1N8R Q;  2MR7 A;  2LML A; 
#chains in the Genus database with same CATH homology
 1VKU A;  2L0Q A;  2K93 A;  4CA3 A;  2CG5 B;  2GDY A;  2K94 A;  2K0Y A;  2KG8 A;  3CE7 A;  2KGA A;  2K2Q A;  2EHT A;  2MD9 A;  1ACP A;  2LIW A;  2N50 A;  2L4B A;  2KOO A;  2MVV A;  3GZM A;  2MVU A;  4DG9 A;  1OR5 A;  1X3O A;  1HY8 A;  2AVA A;  1AF8 A;  2VSQ A;  2CQ8 A;  3EJB A;  2JU2 A;  2M5R A;  2LL8 A;  1DV5 A;  2KOS A;  3LMO A;  2AFD A;  2KOQ A;  5EJD A;  2JU1 A;  2ROQ A;  2K92 A;  3RG2 A;  2N6Y A;  2LKI A;  2FAD A;  2KGD A;  2MR8 A;  5KP8 B;  4PWV B;  5HVC A;  2KGE A;  2FVE A;  2AF8 A;  1L0I A;  2EHS A;  2GDW A;  5CZD B;  2X2B A;  2N6Z A;  3EJE A;  4IZ6 A;  2AFE A;  1T8K A;  2LOL A;  2MF4 A;  2KOR A;  2K0X A;  2LIU A;  2LPK A;  4NEO A;  2FQ1 A;  2PNG A;  5HV8 A;  5KP7 B;  3EJD A;  2KWL A;  2FHS C;  1L0H A;  2N5H A;  2KR5 A;  4BPH A;  2FVA A;  1HQB A;  2KG6 A;  2KG9 A;  2CGQ A;  2FAE A;  4R0M A;  2XZ1 C;  2FAC A;  2KW2 A;  4H2W C;  2DNW A;  2FQ0 A;  2KOP A;  2JQ4 A;  4BPG A;  2XZ0 D;  1F80 D;  4H2X C;  2N98 A;  2L9F A;  2JGP A;  3GZL A;  5KP6 B;  2N5I A;  4PXH B;  1DNY A;  2L22 A;  4BPF A;  2MY5 A;  1NQ4 A;  4MRT C;  2CNR A;  1KLP A;  2QNW A;  2FQ2 A;  2KGC A;  3NY7 B;  2GDX A;  4HKG A;  4H2Y C;  2LTE A;  2MR7 A;  2LML A;  2FVF A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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