3EJBA

Crystal structure of p450bioi in complex with tetradecanoic acid ligated acyl carrier protein
Total Genus 22
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
22
sequence length
78
structure length
78
Chain Sequence
SHMSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Acyl carrier protein
publication title Structural insights from a P450 Carrier Protein complex reveal how specificity is achieved in the P450(BioI) ACP complex.
pubmed doi rcsb
source organism Escherichia coli
molecule tags Oxidoreductase/lipid transport
total genus 22
structure length 78
sequence length 78
chains with identical sequence C, E, G
ec nomenclature
pdb deposition date 2008-09-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 3ejbA00
2JGPA 3EJEA 2CNRA 2MD9A 1T8KA 4R0MA 1HQBA 3GZLA 2AF8A 2LIWA 2KOSA 2CGQA 4H2YC 4NEOA 2FQ1A 2KGCA 2N6ZA 2MR7A 2KR5A 5HV8A 2LTEA 2LIUA 2JU1A 1AF8A 5EJDA 4IZ6A 4CA3A 2ROQA 5KP8B 2FAEA 1F80D 2DNWA 2XZ1C 3RG2A 3CE7A 2KG9A 4PWVB 2XZ0D 2MF4A 2AFEA 2CQ8A 4BPFA 5KP7B 2MVUA 1L0HA 2N98A 5HVCA 2KG8A 2LL8A 3EJDA 2JU2A 2LOLA 4DG9A 2N5HA 2K92A 2KORA 1X3OA 1L0IA 2LPKA 3NY7B 2K93A 2FVAA 1NQ4A 2KWLA 2AVAA 2L9FA 2K94A 2FVEA 2KGDA 1ACPA 2N50A 4H2WC 2GDYA 4PXHB 2FHSC 2L4BA 2QNWA 2N5IA 4BPHA 2MVVA 2KW2A 2N6YA 2M5RA 2FADA 2K2QA 1DNYA 2KG6A 2PNGA 2GDWA 2KOPA 5KP6B 4HKGA 1KLPA 2JQ4A 1VKUA 4H2XC 2AFDA 2MY5A 2KGEA 2KOQA 2X2BA 3EJBA 1DV5A 3LMOA 2K0YA 1OR5A 4MRTC 2FVFA 2MR8A 2FQ0A 2EHTA 1HY8A 2L22A 2GDXA 3GZMA 2FQ2A 4BPGA 2KOOA 2LKIA 2L0QA 2VSQA 5CZDB 2K0XA 2CG5B 2LMLA 2KGAA 2EHSA 2FACA
chains in the Genus database with same CATH superfamily
4COPA 3NTEA 1YIJP 5HGMA 3B5IA 3VRLC 2XT1A 1FR2A 1M90Q 1HQBA 1QRJA 1ZMBA 1VQ8P 2LF4A 2M8PA 1VQ4P 5F2NA 5HV8A 3CXCO 3G28A 5KP8B 1VQMP 1F80D 1GXHA 3M1MA 3DPHA 3CE7A 4WYMA 1GXGA 4XFXA 2XZ0D 1UNKA 2AFEA 3LRYA 5HGOA 4BPFA 1W2BO 2KG8A 3EJDA 3CCEP 2LOLA 4DG9A 1S72P 1RO0A 3CC4P 3U43A 2VLNA 4XROA 2AVAA 1GPJA 2L9FA 4COCA 1E0HA 1M6EX 2N5IA 3CD6P 3G29A 2MVVA 2KW2A 5BS1A 1VQ5P 2P9XA 2GDWA 1Q86Q 5KP6B 1AUMA 1KLPA 1VQ6P 5EW5E 3CC2P 3I55P 3G21A 1QVGO 4F37A 3LMOA 2ONTA 2PEJA 1K73Q 1UJZA 2KOOA 2GZGA 3DTJA 1D1DA 3HZQA 5F2OA 4PH1A 2BUOA 4M0IA 2GZIA 2PEQA 4PH0A 4R0MA 2AF8A 3G0VA 2LIWA 3H47A 2KOSA 2CGQA 4H2YC 4NEOA 3CC7P 2KGCA 3I56P 1VQOP 4IZ6A 4CA3A 2FAEA 2XV6A 1VQNP 3CMAP 2E1MA 3B4QA 4PWVB 1YHQP 3GKLC 3RG6C 3G71P 1K30A 2CWOA 5KP7B 4U0BA 2MVUA 4GR2A 2EIAA 1Q82Q 4UHPB 4QNBA 2K92A 2GYKA 2KORA 4XRQA 1BAJA 2N50A 4H2WC 2GDYA 4PXHB 3G6EP 1Q81Q 2ERHA 2QNWA 1K8AQ 2KG6A 2PNGA 1NJIQ 5DCKA 4HKGA 2PEIA 4H2XC 2KOQA 3WBHA 2X2BA 1VQ9P 4U0CA 2PEKA 2VLOA 3DS4A 3H4EA 2MR8A 3E2DA 2FQ0A 2GDXA 3GZMA 4BPGA 5HGLA 2JYGA 5CZDB 2K0XA 5I4TG 3CCQP 2DGYA 2LMLA 1KD1Q 3CCVP 3CMEP 1RO2A 2MD9A 1VHNA 2JBGA 3GZLA 1A8OA 7CEIA 3CCMP 2XXMA 2N6ZA 2MR7A 2LIUA 1AF8A 2WPTA 4U0AA 2ROQA 2PY8A 2PENA 2Z45A 2XZ1C 2GZEA 3RG2A 1VQLP 3G4SP 2QEXP 2CQ8A 3P05A 1L0HA 2N98A 2LL8A 2PEOA 2JU2A 1YJNP 3HYBA 1X3OA 1IUQA 2FVAA 2K93A 1YITP 2Z46A 1E6JP 2FVEA 2KGDA 1ACPA 1KQSO 4XFZA 1VQPP 1Z6MA 3Q20A 1MZ8A 2L4BA 4BPHA 2N6YA 2M5RA 3CCUP 2K2QA 2PEMA 3CCRP 1Q7YQ 2OARA 4U0EA 4QKOA 1VKUA 2KGEA 1M74A 4GR6A 2K0YA 2KODA 4MRTC 2VLPA 2EG5A 2EHTA 2L22A 2FQ2A 5F2KA 3DS0A 4IPYA 2KGAA 2EHSA 2FACA 1YJ9P 3CCJP 3CPWO 2JGPA 3EJEA 2CNRA 1YJWP 1T8KA 3GJNA 5JPAA 1EMVA 2Z44A 1BXIA 1YI2P 2K0DX 2JO0A 1JJ2O 2FQ1A 1EIAA 2KR5A 2JYLA 2LTEA 2JU1A 5EJDA 2NO8A 2DNWA 3MGEA 1AYIA 2JB0A 3DS1A 4XFYA 2JAZA 2KG9A 2GZFA 2OTJP 3DS5A 1M1KQ 1CEIA 2MF4A 4U0FA 2K5XA 2BHVA 3CCSP 1VQ7P 5HVCA 2L6EA 3H0DA 2N5HA 1L0IA 2GZJA 2LPKA 3NY7B 1NQ4A 2KWLA 2VLQA 2K94A 3G1IA 1KC8Q 3CCLP 2OTLP 1RNIA 2FHSC 5HGNA 1VQKP 3DS3A 2FADA 1M6NA 1DNYA 1IMPA 2QA4P 2KOPA 1N8RQ 1ZNVA 1A43A 3DS2A 3G26A 2EFJA 2JQ4A 4U0DA 3G1GA 2AFDA 2MY5A 3EJBA 1EOQA 3OW2O 1DV5A 1IMQA 1OR5A 1K9MQ 2M8NA 5BS2A 2FVFA 1QVFO 1HY8A 2LKIA 2L0QA 2VSQA 2CG5B 2M8LA
chains in the Genus database with same CATH topology
2JGPA 3EJEA 2CNRA 2MD9A 1T8KA 4R0MA 1HQBA 3GZLA 2AF8A 2LIWA 2KOSA 2CGQA 4H2YC 4NEOA 2FQ1A 2KGCA 2N6ZA 2MR7A 2KR5A 5HV8A 2LTEA 2LIUA 2JU1A 1AF8A 5EJDA 4IZ6A 4CA3A 2ROQA 5KP8B 2FAEA 1F80D 2DNWA 2XZ1C 3RG2A 3CE7A 2KG9A 4PWVB 2XZ0D 2MF4A 2AFEA 2CQ8A 4BPFA 5KP7B 2MVUA 1L0HA 2N98A 5HVCA 2KG8A 2LL8A 3EJDA 2JU2A 2LOLA 4DG9A 2N5HA 2K92A 2KORA 1X3OA 1L0IA 2LPKA 3NY7B 2K93A 2FVAA 1NQ4A 2KWLA 2AVAA 2L9FA 2K94A 2FVEA 2KGDA 1ACPA 2N50A 4H2WC 2GDYA 4PXHB 2FHSC 2L4BA 2QNWA 2N5IA 4BPHA 2MVVA 2KW2A 2N6YA 2M5RA 2FADA 2K2QA 1DNYA 2KG6A 2PNGA 2GDWA 2KOPA 5KP6B 4HKGA 1KLPA 2JQ4A 1VKUA 4H2XC 2AFDA 2MY5A 2KGEA 2KOQA 2X2BA 3EJBA 1DV5A 3LMOA 2K0YA 1OR5A 4MRTC 2FVFA 2MR8A 2FQ0A 2EHTA 1HY8A 2L22A 2GDXA 3GZMA 2FQ2A 4BPGA 2KOOA 2LKIA 2L0QA 2VSQA 5CZDB 2K0XA 2CG5B 2LMLA 2KGAA 2EHSA 2FACA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2JGP A;  3EJE A;  2CNR A;  2MD9 A;  1T8K A;  4R0M A;  1HQB A;  3GZL A;  2AF8 A;  2LIW A;  2KOS A;  2CGQ A;  4H2Y C;  4NEO A;  2FQ1 A;  2KGC A;  2N6Z A;  2MR7 A;  2KR5 A;  5HV8 A;  2LTE A;  2LIU A;  2JU1 A;  1AF8 A;  5EJD A;  4IZ6 A;  4CA3 A;  2ROQ A;  5KP8 B;  2FAE A;  1F80 D;  2DNW A;  2XZ1 C;  3RG2 A;  3CE7 A;  2KG9 A;  4PWV B;  2XZ0 D;  2MF4 A;  2AFE A;  2CQ8 A;  4BPF A;  5KP7 B;  2MVU A;  1L0H A;  2N98 A;  5HVC A;  2KG8 A;  2LL8 A;  3EJD A;  2JU2 A;  2LOL A;  4DG9 A;  2N5H A;  2K92 A;  2KOR A;  1X3O A;  1L0I A;  2LPK A;  3NY7 B;  2K93 A;  2FVA A;  1NQ4 A;  2KWL A;  2AVA A;  2L9F A;  2K94 A;  2FVE A;  2KGD A;  1ACP A;  2N50 A;  4H2W C;  2GDY A;  4PXH B;  2FHS C;  2L4B A;  2QNW A;  2N5I A;  4BPH A;  2MVV A;  2KW2 A;  2N6Y A;  2M5R A;  2FAD A;  2K2Q A;  1DNY A;  2KG6 A;  2PNG A;  2GDW A;  2KOP A;  5KP6 B;  4HKG A;  1KLP A;  2JQ4 A;  1VKU A;  4H2X C;  2AFD A;  2MY5 A;  2KGE A;  2KOQ A;  2X2B A;  3EJB A;  1DV5 A;  3LMO A;  2K0Y A;  1OR5 A;  4MRT C;  2FVF A;  2MR8 A;  2FQ0 A;  2EHT A;  1HY8 A;  2L22 A;  2GDX A;  3GZM A;  2FQ2 A;  4BPG A;  2KOO A;  2LKI A;  2L0Q A;  2VSQ A;  5CZD B;  2K0X A;  2CG5 B;  2LML A;  2KGA A;  2EHS A;  2FAC A; 
#chains in the Genus database with same CATH topology
 4COP A;  3NTE A;  1YIJ P;  5HGM A;  3B5I A;  3VRL C;  2XT1 A;  1FR2 A;  1M90 Q;  1HQB A;  1QRJ A;  1ZMB A;  1VQ8 P;  2LF4 A;  2M8P A;  1VQ4 P;  5F2N A;  5HV8 A;  3CXC O;  3G28 A;  5KP8 B;  1VQM P;  1F80 D;  1GXH A;  3M1M A;  3DPH A;  3CE7 A;  4WYM A;  1GXG A;  4XFX A;  2XZ0 D;  1UNK A;  2AFE A;  3LRY A;  5HGO A;  4BPF A;  1W2B O;  2KG8 A;  3EJD A;  3CCE P;  2LOL A;  4DG9 A;  1S72 P;  1RO0 A;  3CC4 P;  3U43 A;  2VLN A;  4XRO A;  2AVA A;  1GPJ A;  2L9F A;  4COC A;  1E0H A;  1M6E X;  2N5I A;  3CD6 P;  3G29 A;  2MVV A;  2KW2 A;  5BS1 A;  1VQ5 P;  2P9X A;  2GDW A;  1Q86 Q;  5KP6 B;  1AUM A;  1KLP A;  1VQ6 P;  5EW5 E;  3CC2 P;  3I55 P;  3G21 A;  1QVG O;  4F37 A;  3LMO A;  2ONT A;  2PEJ A;  1K73 Q;  1UJZ A;  2KOO A;  2GZG A;  3DTJ A;  1D1D A;  3HZQ A;  5F2O A;  4PH1 A;  2BUO A;  4M0I A;  2GZI A;  2PEQ A;  4PH0 A;  4R0M A;  2AF8 A;  3G0V A;  2LIW A;  3H47 A;  2KOS A;  2CGQ A;  4H2Y C;  4NEO A;  3CC7 P;  2KGC A;  3I56 P;  1VQO P;  4IZ6 A;  4CA3 A;  2FAE A;  2XV6 A;  1VQN P;  3CMA P;  2E1M A;  3B4Q A;  4PWV B;  1YHQ P;  3GKL C;  3RG6 C;  3G71 P;  1K30 A;  2CWO A;  5KP7 B;  4U0B A;  2MVU A;  4GR2 A;  2EIA A;  1Q82 Q;  4UHP B;  4QNB A;  2K92 A;  2GYK A;  2KOR A;  4XRQ A;  1BAJ A;  2N50 A;  4H2W C;  2GDY A;  4PXH B;  3G6E P;  1Q81 Q;  2ERH A;  2QNW A;  1K8A Q;  2KG6 A;  2PNG A;  1NJI Q;  5DCK A;  4HKG A;  2PEI A;  4H2X C;  2KOQ A;  3WBH A;  2X2B A;  1VQ9 P;  4U0C A;  2PEK A;  2VLO A;  3DS4 A;  3H4E A;  2MR8 A;  3E2D A;  2FQ0 A;  2GDX A;  3GZM A;  4BPG A;  5HGL A;  2JYG A;  5CZD B;  2K0X A;  5I4T G;  3CCQ P;  2DGY A;  2LML A;  1KD1 Q;  3CCV P;  3CME P;  1RO2 A;  2MD9 A;  1VHN A;  2JBG A;  3GZL A;  1A8O A;  7CEI A;  3CCM P;  2XXM A;  2N6Z A;  2MR7 A;  2LIU A;  1AF8 A;  2WPT A;  4U0A A;  2ROQ A;  2PY8 A;  2PEN A;  2Z45 A;  2XZ1 C;  2GZE A;  3RG2 A;  1VQL P;  3G4S P;  2QEX P;  2CQ8 A;  3P05 A;  1L0H A;  2N98 A;  2LL8 A;  2PEO A;  2JU2 A;  1YJN P;  3HYB A;  1X3O A;  1IUQ A;  2FVA A;  2K93 A;  1YIT P;  2Z46 A;  1E6J P;  2FVE A;  2KGD A;  1ACP A;  1KQS O;  4XFZ A;  1VQP P;  1Z6M A;  3Q20 A;  1MZ8 A;  2L4B A;  4BPH A;  2N6Y A;  2M5R A;  3CCU P;  2K2Q A;  2PEM A;  3CCR P;  1Q7Y Q;  2OAR A;  4U0E A;  4QKO A;  1VKU A;  2KGE A;  1M74 A;  4GR6 A;  2K0Y A;  2KOD A;  4MRT C;  2VLP A;  2EG5 A;  2EHT A;  2L22 A;  2FQ2 A;  5F2K A;  3DS0 A;  4IPY A;  2KGA A;  2EHS A;  2FAC A;  1YJ9 P;  3CCJ P;  3CPW O;  2JGP A;  3EJE A;  2CNR A;  1YJW P;  1T8K A;  3GJN A;  5JPA A;  1EMV A;  2Z44 A;  1BXI A;  1YI2 P;  2K0D X;  2JO0 A;  1JJ2 O;  2FQ1 A;  1EIA A;  2KR5 A;  2JYL A;  2LTE A;  2JU1 A;  5EJD A;  2NO8 A;  2DNW A;  3MGE A;  1AYI A;  2JB0 A;  3DS1 A;  4XFY A;  2JAZ A;  2KG9 A;  2GZF A;  2OTJ P;  3DS5 A;  1M1K Q;  1CEI A;  2MF4 A;  4U0F A;  2K5X A;  2BHV A;  3CCS P;  1VQ7 P;  5HVC A;  2L6E A;  3H0D A;  2N5H A;  1L0I A;  2GZJ A;  2LPK A;  3NY7 B;  1NQ4 A;  2KWL A;  2VLQ A;  2K94 A;  3G1I A;  1KC8 Q;  3CCL P;  2OTL P;  1RNI A;  2FHS C;  5HGN A;  1VQK P;  3DS3 A;  2FAD A;  1M6N A;  1DNY A;  1IMP A;  2QA4 P;  2KOP A;  1N8R Q;  1ZNV A;  1A43 A;  3DS2 A;  3G26 A;  2EFJ A;  2JQ4 A;  4U0D A;  3G1G A;  2AFD A;  2MY5 A;  3EJB A;  1EOQ A;  3OW2 O;  1DV5 A;  1IMQ A;  1OR5 A;  1K9M Q;  2M8N A;  5BS2 A;  2FVF A;  1QVF O;  1HY8 A;  2LKI A;  2L0Q A;  2VSQ A;  2CG5 B;  2M8L A; 
#chains in the Genus database with same CATH homology
 2JGP A;  3EJE A;  2CNR A;  2MD9 A;  1T8K A;  4R0M A;  1HQB A;  3GZL A;  2AF8 A;  2LIW A;  2KOS A;  2CGQ A;  4H2Y C;  4NEO A;  2FQ1 A;  2KGC A;  2N6Z A;  2MR7 A;  2KR5 A;  5HV8 A;  2LTE A;  2LIU A;  2JU1 A;  1AF8 A;  5EJD A;  4IZ6 A;  4CA3 A;  2ROQ A;  5KP8 B;  2FAE A;  1F80 D;  2DNW A;  2XZ1 C;  3RG2 A;  3CE7 A;  2KG9 A;  4PWV B;  2XZ0 D;  2MF4 A;  2AFE A;  2CQ8 A;  4BPF A;  5KP7 B;  2MVU A;  1L0H A;  2N98 A;  5HVC A;  2KG8 A;  2LL8 A;  3EJD A;  2JU2 A;  2LOL A;  4DG9 A;  2N5H A;  2K92 A;  2KOR A;  1X3O A;  1L0I A;  2LPK A;  3NY7 B;  2K93 A;  2FVA A;  1NQ4 A;  2KWL A;  2AVA A;  2L9F A;  2K94 A;  2FVE A;  2KGD A;  1ACP A;  2N50 A;  4H2W C;  2GDY A;  4PXH B;  2FHS C;  2L4B A;  2QNW A;  2N5I A;  4BPH A;  2MVV A;  2KW2 A;  2N6Y A;  2M5R A;  2FAD A;  2K2Q A;  1DNY A;  2KG6 A;  2PNG A;  2GDW A;  2KOP A;  5KP6 B;  4HKG A;  1KLP A;  2JQ4 A;  1VKU A;  4H2X C;  2AFD A;  2MY5 A;  2KGE A;  2KOQ A;  2X2B A;  3EJB A;  1DV5 A;  3LMO A;  2K0Y A;  1OR5 A;  4MRT C;  2FVF A;  2MR8 A;  2FQ0 A;  2EHT A;  1HY8 A;  2L22 A;  2GDX A;  3GZM A;  2FQ2 A;  4BPG A;  2KOO A;  2LKI A;  2L0Q A;  2VSQ A;  5CZD B;  2K0X A;  2CG5 B;  2LML A;  2KGA A;  2EHS A;  2FAC A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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