3EJBA

Crystal structure of p450bioi in complex with tetradecanoic acid ligated acyl carrier protein
Total Genus 22
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
22
sequence length
78
structure length
78
Chain Sequence
SHMSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase/lipid transport
source organism Escherichia coli
publication title Structural insights from a P450 Carrier Protein complex reveal how specificity is achieved in the P450(BioI) ACP complex.
pubmed doi rcsb
molecule keywords Acyl carrier protein
total genus 22
structure length 78
sequence length 78
chains with identical sequence C, E, G
ec nomenclature
pdb deposition date 2008-09-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 3ejbA00
1T8KA 2AFDA 2K94A 2CNRA 2KG9A 3EJDA 2QNWA 2DNWA 2FQ1A 4BPGA 2K92A 1HQBA 2KOSA 2L4BA 2FVEA 4IZ6A 2CG5B 2KGCA 4MRTC 5CZDB 4PWVB 2GDWA 2KOQA 2L9FA 2XZ0D 2ROQA 4PXHB 1F80D 2MR8A 3EJBA 2GDYA 2JU2A 2CGQA 2FVFA 2LTEA 2MD9A 2KGDA 2FHSC 2KW2A 5KP7B 2MF4A 1DNYA 2JQ4A 2AFEA 2L22A 2K93A 3LMOA 2EHTA 5EJDA 2K2QA 2MR7A 4CA3A 2KGEA 3NY7B 4H2YC 1AF8A 5KP6B 4BPFA 4H2WC 2MY5A 2N6ZA 2KOPA 2N6YA 2N50A 2GDXA 2KOOA 5HV8A 4BPHA 4R0MA 1ACPA 4HKGA 2EHSA 2LIWA 1KLPA 2MVUA 3GZMA 2K0YA 2N5IA 1HY8A 2LL8A 2AF8A 2KG6A 2JGPA 2L0QA 3GZLA 2KORA 1DV5A 1OR5A 2FAEA 2LPKA 1L0IA 2N5HA 2X2BA 5KP8B 1VKUA 2KGAA 5HVCA 3EJEA 2LIUA 2KWLA 3CE7A 1L0HA 2LOLA 2FADA 2FQ0A 2KR5A 2LKIA 2M5RA 3RG2A 2AVAA 4NEOA 2JU1A 2KG8A 2PNGA 2K0XA 1NQ4A 4DG9A 2FACA 2MVVA 4H2XC 2FVAA 2CQ8A 2N98A 1X3OA 2VSQA 2LMLA 2FQ2A 2XZ1C
chains in the Genus database with same CATH superfamily
1K30A 3DS3A 2CNRA 3HZQA 2K5XA 5F2KA 2FQ1A 2K92A 3CCMP 2CG5B 2KGCA 2Z46A 5CZDB 1YI2P 2KOQA 3H4EA 3CC7P 3Q20A 2ROQA 1F80D 1A8OA 2MR8A 1VQMP 1VHNA 2KW2A 2FHSC 3G1GA 1YJ9P 4U0DA 2JQ4A 3G0VA 2K93A 5DCKA 5HGMA 5EJDA 2MR7A 3G71P 2OTLP 4U0FA 3NY7B 1JJ2O 3CMEP 3DS5A 1ZMBA 2CWOA 3DS2A 2GDXA 4BPHA 1K8AQ 1VQOP 4R0MA 1EOQA 2EHSA 2JO0A 4UHPB 2E1MA 3U43A 2EG5A 2LL8A 2WPTA 4U0AA 4PH0A 1K9MQ 1VQ4P 2L0QA 3GZLA 1OR5A 1D1DA 2X2BA 5KP8B 4M0IA 3EJEA 3DPHA 1M1KQ 4PH1A 2KODA 3CE7A 1E0HA 2XT1A 3RG2A 2K0XA 1NQ4A 2MVVA 4H2XC 2NO8A 1YJNP 2LMLA 1YIJP 1UJZA 2XXMA 2XZ1C 1T8KA 2ONTA 2JBGA 3EJDA 3CD6P 2PEMA 2KOSA 1GXGA 4IZ6A 1YITP 1N8RQ 3G6EP 4PWVB 3DS4A 3MGEA 2PEKA 2JU2A 2MD9A 1BAJA 1A43A 3OW2O 2KGDA 5KP7B 2VLNA 2MF4A 1QVGO 3CMAP 4WYMA 2AFEA 3LMOA 2EHTA 1S72P 1RNIA 1FR2A 2PEJA 2PENA 2KGEA 3CCLP 5KP6B 4U0EA 4BPFA 3WBHA 4XFYA 3RG6C 3CXCO 4H2WC 1EIAA 5JPAA 1MZ8A 2N50A 3G29A 3I55P 2KOOA 4HKGA 3G4SP 2P9XA 7CEIA 3GJNA 4U0BA 1VQ8P 3DS0A 1Q86Q 2XV6A 1VQ9P 1DV5A 3CCJP 2FAEA 2JYGA 2OTJP 1L0IA 3H47A 2PEIA 2N5HA 2JB0A 4XFXA 3M1MA 1VKUA 1AYIA 1M74A 1Q82Q 2PEOA 1VQLP 4XFZA 3E2DA 1L0HA 4GR6A 2FQ0A 2KR5A 2LKIA 2AVAA 2KG8A 2VLPA 1VQ7P 1QVFO 2GZGA 5BS2A 2Z44A 2N98A 1IUQA 1X3OA 3G1IA 3LRYA 2FQ2A 2LF4A 2AFDA 2KG9A 3CCRP 1M6NA 2DGYA 2L4BA 1Z6MA 2L6EA 2M8LA 2GDWA 2XZ0D 4PXHB 3CCEP 2CGQA 2FVFA 2ERHA 2LTEA 1DNYA 4F37A 2L22A 3CC2P 1KD1Q 2K2QA 1KC8Q 2N6YA 1BXIA 1GPJA 2Z45A 4GR2A 5HV8A 2GZIA 1VQNP 2VLQA 2OARA 1KQSO 2LIWA 2MVUA 3CPWO 3GZMA 1VQPP 2JGPA 2KORA 1VQKP 2M8PA 2PEQA 2KGAA 3G28A 5HVCA 2K0DX 1M6EX 2VLOA 2QEXP 2KWLA 2LOLA 2FADA 5EW5E 1YJWP 1M90Q 1QRJA 2CQ8A 1NJIQ 3NTEA 4QKOA 2K94A 2GZEA 3DTJA 2PY8A 2QNWA 2DNWA 1K73Q 4BPGA 1HQBA 2JAZA 5HGNA 2FVEA 4MRTC 4XRQA 5HGLA 5I4TG 2L9FA 1Q7YQ 2EFJA 4XROA 3EJBA 2GDYA 4COCA 3B4QA 3H0DA 3G26A 2EIAA 1AUMA 2GZFA 1W2BO 2BUOA 4CA3A 1GXHA 3CC4P 4H2YC 1AF8A 3CCQP 3B5IA 3HYBA 3CCSP 1Q81Q 2MY5A 2N6ZA 2KOPA 4IPYA 2JYLA 3I56P 1ACPA 1E6JP 5BS1A 2BHVA 1KLPA 1ZNVA 5F2OA 2K0YA 2N5IA 1HY8A 2AF8A 1VQ5P 5HGOA 2KG6A 3CCVP 1UNKA 2LPKA 1VQ6P 1CEIA 3GKLC 2M8NA 2QA4P 3DS1A 1YHQP 2GZJA 2GYKA 4COPA 2LIUA 3VRLC 2M5RA 4U0CA 4NEOA 1RO0A 2JU1A 2PNGA 4DG9A 2FACA 1IMPA 1EMVA 2FVAA 3P05A 4QNBA 3CCUP 2VSQA 1IMQA 3G21A 1RO2A 5F2NA
chains in the Genus database with same CATH topology
1T8KA 2AFDA 2K94A 2CNRA 2KG9A 3EJDA 2QNWA 2DNWA 2FQ1A 4BPGA 2K92A 1HQBA 2KOSA 2L4BA 2FVEA 4IZ6A 2CG5B 2KGCA 4MRTC 5CZDB 4PWVB 2GDWA 2KOQA 2L9FA 2XZ0D 2ROQA 4PXHB 1F80D 2MR8A 3EJBA 2GDYA 2JU2A 2CGQA 2FVFA 2LTEA 2MD9A 2KGDA 2FHSC 2KW2A 5KP7B 2MF4A 1DNYA 2JQ4A 2AFEA 2L22A 2K93A 3LMOA 2EHTA 5EJDA 2K2QA 2MR7A 4CA3A 2KGEA 3NY7B 4H2YC 1AF8A 5KP6B 4BPFA 4H2WC 2MY5A 2N6ZA 2KOPA 2N6YA 2N50A 2GDXA 2KOOA 5HV8A 4BPHA 4R0MA 1ACPA 4HKGA 2EHSA 2LIWA 1KLPA 2MVUA 3GZMA 2K0YA 2N5IA 1HY8A 2LL8A 2AF8A 2KG6A 2JGPA 2L0QA 3GZLA 2KORA 1DV5A 1OR5A 2FAEA 2LPKA 1L0IA 2N5HA 2X2BA 5KP8B 1VKUA 2KGAA 5HVCA 3EJEA 2LIUA 2KWLA 3CE7A 1L0HA 2LOLA 2FADA 2FQ0A 2KR5A 2LKIA 2M5RA 3RG2A 2AVAA 4NEOA 2JU1A 2KG8A 2PNGA 2K0XA 1NQ4A 4DG9A 2FACA 2MVVA 4H2XC 2FVAA 2CQ8A 2N98A 1X3OA 2VSQA 2LMLA 2FQ2A 2XZ1C
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1T8K A;  2AFD A;  2K94 A;  2CNR A;  2KG9 A;  3EJD A;  2QNW A;  2DNW A;  2FQ1 A;  4BPG A;  2K92 A;  1HQB A;  2KOS A;  2L4B A;  2FVE A;  4IZ6 A;  2CG5 B;  2KGC A;  4MRT C;  5CZD B;  4PWV B;  2GDW A;  2KOQ A;  2L9F A;  2XZ0 D;  2ROQ A;  4PXH B;  1F80 D;  2MR8 A;  3EJB A;  2GDY A;  2JU2 A;  2CGQ A;  2FVF A;  2LTE A;  2MD9 A;  2KGD A;  2FHS C;  2KW2 A;  5KP7 B;  2MF4 A;  1DNY A;  2JQ4 A;  2AFE A;  2L22 A;  2K93 A;  3LMO A;  2EHT A;  5EJD A;  2K2Q A;  2MR7 A;  4CA3 A;  2KGE A;  3NY7 B;  4H2Y C;  1AF8 A;  5KP6 B;  4BPF A;  4H2W C;  2MY5 A;  2N6Z A;  2KOP A;  2N6Y A;  2N50 A;  2GDX A;  2KOO A;  5HV8 A;  4BPH A;  4R0M A;  1ACP A;  4HKG A;  2EHS A;  2LIW A;  1KLP A;  2MVU A;  3GZM A;  2K0Y A;  2N5I A;  1HY8 A;  2LL8 A;  2AF8 A;  2KG6 A;  2JGP A;  2L0Q A;  3GZL A;  2KOR A;  1DV5 A;  1OR5 A;  2FAE A;  2LPK A;  1L0I A;  2N5H A;  2X2B A;  5KP8 B;  1VKU A;  2KGA A;  5HVC A;  3EJE A;  2LIU A;  2KWL A;  3CE7 A;  1L0H A;  2LOL A;  2FAD A;  2FQ0 A;  2KR5 A;  2LKI A;  2M5R A;  3RG2 A;  2AVA A;  4NEO A;  2JU1 A;  2KG8 A;  2PNG A;  2K0X A;  1NQ4 A;  4DG9 A;  2FAC A;  2MVV A;  4H2X C;  2FVA A;  2CQ8 A;  2N98 A;  1X3O A;  2VSQ A;  2LML A;  2FQ2 A;  2XZ1 C; 
#chains in the Genus database with same CATH topology
 1K30 A;  3DS3 A;  2CNR A;  3HZQ A;  2K5X A;  5F2K A;  2FQ1 A;  2K92 A;  3CCM P;  2CG5 B;  2KGC A;  2Z46 A;  5CZD B;  1YI2 P;  2KOQ A;  3H4E A;  3CC7 P;  3Q20 A;  2ROQ A;  1F80 D;  1A8O A;  2MR8 A;  1VQM P;  1VHN A;  2KW2 A;  2FHS C;  3G1G A;  1YJ9 P;  4U0D A;  2JQ4 A;  3G0V A;  2K93 A;  5DCK A;  5HGM A;  5EJD A;  2MR7 A;  3G71 P;  2OTL P;  4U0F A;  3NY7 B;  1JJ2 O;  3CME P;  3DS5 A;  1ZMB A;  2CWO A;  3DS2 A;  2GDX A;  4BPH A;  1K8A Q;  1VQO P;  4R0M A;  1EOQ A;  2EHS A;  2JO0 A;  4UHP B;  2E1M A;  3U43 A;  2EG5 A;  2LL8 A;  2WPT A;  4U0A A;  4PH0 A;  1K9M Q;  1VQ4 P;  2L0Q A;  3GZL A;  1OR5 A;  1D1D A;  2X2B A;  5KP8 B;  4M0I A;  3EJE A;  3DPH A;  1M1K Q;  4PH1 A;  2KOD A;  3CE7 A;  1E0H A;  2XT1 A;  3RG2 A;  2K0X A;  1NQ4 A;  2MVV A;  4H2X C;  2NO8 A;  1YJN P;  2LML A;  1YIJ P;  1UJZ A;  2XXM A;  2XZ1 C;  1T8K A;  2ONT A;  2JBG A;  3EJD A;  3CD6 P;  2PEM A;  2KOS A;  1GXG A;  4IZ6 A;  1YIT P;  1N8R Q;  3G6E P;  4PWV B;  3DS4 A;  3MGE A;  2PEK A;  2JU2 A;  2MD9 A;  1BAJ A;  1A43 A;  3OW2 O;  2KGD A;  5KP7 B;  2VLN A;  2MF4 A;  1QVG O;  3CMA P;  4WYM A;  2AFE A;  3LMO A;  2EHT A;  1S72 P;  1RNI A;  1FR2 A;  2PEJ A;  2PEN A;  2KGE A;  3CCL P;  5KP6 B;  4U0E A;  4BPF A;  3WBH A;  4XFY A;  3RG6 C;  3CXC O;  4H2W C;  1EIA A;  5JPA A;  1MZ8 A;  2N50 A;  3G29 A;  3I55 P;  2KOO A;  4HKG A;  3G4S P;  2P9X A;  7CEI A;  3GJN A;  4U0B A;  1VQ8 P;  3DS0 A;  1Q86 Q;  2XV6 A;  1VQ9 P;  1DV5 A;  3CCJ P;  2FAE A;  2JYG A;  2OTJ P;  1L0I A;  3H47 A;  2PEI A;  2N5H A;  2JB0 A;  4XFX A;  3M1M A;  1VKU A;  1AYI A;  1M74 A;  1Q82 Q;  2PEO A;  1VQL P;  4XFZ A;  3E2D A;  1L0H A;  4GR6 A;  2FQ0 A;  2KR5 A;  2LKI A;  2AVA A;  2KG8 A;  2VLP A;  1VQ7 P;  1QVF O;  2GZG A;  5BS2 A;  2Z44 A;  2N98 A;  1IUQ A;  1X3O A;  3G1I A;  3LRY A;  2FQ2 A;  2LF4 A;  2AFD A;  2KG9 A;  3CCR P;  1M6N A;  2DGY A;  2L4B A;  1Z6M A;  2L6E A;  2M8L A;  2GDW A;  2XZ0 D;  4PXH B;  3CCE P;  2CGQ A;  2FVF A;  2ERH A;  2LTE A;  1DNY A;  4F37 A;  2L22 A;  3CC2 P;  1KD1 Q;  2K2Q A;  1KC8 Q;  2N6Y A;  1BXI A;  1GPJ A;  2Z45 A;  4GR2 A;  5HV8 A;  2GZI A;  1VQN P;  2VLQ A;  2OAR A;  1KQS O;  2LIW A;  2MVU A;  3CPW O;  3GZM A;  1VQP P;  2JGP A;  2KOR A;  1VQK P;  2M8P A;  2PEQ A;  2KGA A;  3G28 A;  5HVC A;  2K0D X;  1M6E X;  2VLO A;  2QEX P;  2KWL A;  2LOL A;  2FAD A;  5EW5 E;  1YJW P;  1M90 Q;  1QRJ A;  2CQ8 A;  1NJI Q;  3NTE A;  4QKO A;  2K94 A;  2GZE A;  3DTJ A;  2PY8 A;  2QNW A;  2DNW A;  1K73 Q;  4BPG A;  1HQB A;  2JAZ A;  5HGN A;  2FVE A;  4MRT C;  4XRQ A;  5HGL A;  5I4T G;  2L9F A;  1Q7Y Q;  2EFJ A;  4XRO A;  3EJB A;  2GDY A;  4COC A;  3B4Q A;  3H0D A;  3G26 A;  2EIA A;  1AUM A;  2GZF A;  1W2B O;  2BUO A;  4CA3 A;  1GXH A;  3CC4 P;  4H2Y C;  1AF8 A;  3CCQ P;  3B5I A;  3HYB A;  3CCS P;  1Q81 Q;  2MY5 A;  2N6Z A;  2KOP A;  4IPY A;  2JYL A;  3I56 P;  1ACP A;  1E6J P;  5BS1 A;  2BHV A;  1KLP A;  1ZNV A;  5F2O A;  2K0Y A;  2N5I A;  1HY8 A;  2AF8 A;  1VQ5 P;  5HGO A;  2KG6 A;  3CCV P;  1UNK A;  2LPK A;  1VQ6 P;  1CEI A;  3GKL C;  2M8N A;  2QA4 P;  3DS1 A;  1YHQ P;  2GZJ A;  2GYK A;  4COP A;  2LIU A;  3VRL C;  2M5R A;  4U0C A;  4NEO A;  1RO0 A;  2JU1 A;  2PNG A;  4DG9 A;  2FAC A;  1IMP A;  1EMV A;  2FVA A;  3P05 A;  4QNB A;  3CCU P;  2VSQ A;  1IMQ A;  3G21 A;  1RO2 A;  5F2N A; 
#chains in the Genus database with same CATH homology
 1T8K A;  2AFD A;  2K94 A;  2CNR A;  2KG9 A;  3EJD A;  2QNW A;  2DNW A;  2FQ1 A;  4BPG A;  2K92 A;  1HQB A;  2KOS A;  2L4B A;  2FVE A;  4IZ6 A;  2CG5 B;  2KGC A;  4MRT C;  5CZD B;  4PWV B;  2GDW A;  2KOQ A;  2L9F A;  2XZ0 D;  2ROQ A;  4PXH B;  1F80 D;  2MR8 A;  3EJB A;  2GDY A;  2JU2 A;  2CGQ A;  2FVF A;  2LTE A;  2MD9 A;  2KGD A;  2FHS C;  2KW2 A;  5KP7 B;  2MF4 A;  1DNY A;  2JQ4 A;  2AFE A;  2L22 A;  2K93 A;  3LMO A;  2EHT A;  5EJD A;  2K2Q A;  2MR7 A;  4CA3 A;  2KGE A;  3NY7 B;  4H2Y C;  1AF8 A;  5KP6 B;  4BPF A;  4H2W C;  2MY5 A;  2N6Z A;  2KOP A;  2N6Y A;  2N50 A;  2GDX A;  2KOO A;  5HV8 A;  4BPH A;  4R0M A;  1ACP A;  4HKG A;  2EHS A;  2LIW A;  1KLP A;  2MVU A;  3GZM A;  2K0Y A;  2N5I A;  1HY8 A;  2LL8 A;  2AF8 A;  2KG6 A;  2JGP A;  2L0Q A;  3GZL A;  2KOR A;  1DV5 A;  1OR5 A;  2FAE A;  2LPK A;  1L0I A;  2N5H A;  2X2B A;  5KP8 B;  1VKU A;  2KGA A;  5HVC A;  3EJE A;  2LIU A;  2KWL A;  3CE7 A;  1L0H A;  2LOL A;  2FAD A;  2FQ0 A;  2KR5 A;  2LKI A;  2M5R A;  3RG2 A;  2AVA A;  4NEO A;  2JU1 A;  2KG8 A;  2PNG A;  2K0X A;  1NQ4 A;  4DG9 A;  2FAC A;  2MVV A;  4H2X C;  2FVA A;  2CQ8 A;  2N98 A;  1X3O A;  2VSQ A;  2LML A;  2FQ2 A;  2XZ1 C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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