2MVVA

Solution structure of the 5-phenyl-3-oxo-pentyl actinorhodin acyl carrier protein from streptomyces coelicolor
Total Genus 23
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
23
sequence length
86
structure length
86
Chain Sequence
MATLLTTDDLRRALVESAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Actinorhodin polyketide synthase acyl carrier protein
publication title ACP-ligand recognition: Selection of derivatized aromatic biosynthetic intermediates
rcsb
source organism Streptomyces coelicolor
molecule tags Biosynthetic protein
total genus 23
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 2014-10-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2mvvA00
2KORA 1VKUA 2K2QA 1KLPA 4H2XC 2KOSA 2K92A 2AFDA 5CZDB 2CNRA 2MR8A 2N5HA 2CQ8A 5HVCA 2GDYA 2LTEA 1T8KA 2KG9A 1NQ4A 2K0XA 2JU2A 5KP8B 1L0IA 2ROQA 2XZ0D 2KGEA 2FVEA 2KGDA 4R0MA 2JU1A 2LKIA 2CG5B 1L0HA 2KW2A 3LMOA 2MY5A 2MVUA 2GDWA 3EJDA 4DG9A 2LL8A 2N6YA 4NEOA 1DV5A 3RG2A 2M5RA 2CGQA 2L9FA 2FVFA 2LPKA 5EJDA 2L22A 2KGCA 2AVAA 2L0QA 3GZLA 1ACPA 2FACA 2JQ4A 2N5IA 2L4BA 4HKGA 5HV8A 4MRTC 4PWVB 2K94A 5KP6B 2LIUA 2XZ1C 2AFEA 2FVAA 2FHSC 2VSQA 1F80D 2LMLA 2N6ZA 2DNWA 4CA3A 3EJBA 4BPGA 2N98A 3EJEA 4BPFA 2GDXA 2KOPA 4PXHB 2KG6A 1X3OA 2FAEA 2LOLA 2KOOA 2KWLA 3NY7B 4IZ6A 2JGPA 2KGAA 2K93A 2X2BA 1HY8A 2FQ1A 3CE7A 2FQ0A 2FADA 2PNGA 4H2WC 1OR5A 2EHSA 2K0YA 2KOQA 2AF8A 2LIWA 2MVVA 2FQ2A 2N50A 4BPHA 3GZMA 5KP7B 1DNYA 1AF8A 4H2YC 2MD9A 2EHTA 2MR7A 2KR5A 1HQBA 2QNWA 2MF4A 2KG8A
chains in the Genus database with same CATH superfamily
1RO2A 4PH1A 1KLPA 4H2XC 3CCEP 2M8LA 2AFDA 5CZDB 2N5HA 1EMVA 2LTEA 2KG9A 2GZFA 1L0IA 2ROQA 2KGEA 2FVEA 2KGDA 4QKOA 2KW2A 2NO8A 3P05A 3U43A 1KD1Q 2XT1A 1QRJA 1VQ8P 2CGQA 4U0FA 2L9FA 2BHVA 3DPHA 5EJDA 4U0EA 1ACPA 3G21A 2FACA 2LF4A 5BS1A 1K30A 2ONTA 3CCVP 2GZGA 2JB0A 1BXIA 4HKGA 5HGLA 3M1MA 4XFZA 3CC7P 4IPYA 5KP6B 2LIUA 2XZ1C 2VLPA 1MZ8A 2K0DX 3EJBA 2OTLP 2DGYA 2E1MA 3CCRP 4PXHB 3I56P 3NY7B 2CWOA 5F2OA 3CMAP 2XXMA 3CE7A 2EHSA 1Q7YQ 2K0YA 2KG8A 3DS0A 5HGOA 1VQ7P 4GR6A 2MD9A 1K8AQ 2MF4A 7CEIA 3EJDA 1UJZA 5HGMA 1VKUA 3Q20A 4U0BA 2K92A 3MGEA 2OTJP 2MR8A 2OARA 2CQ8A 2BUOA 2PY8A 3CMEP 1NQ4A 2K0XA 2JU2A 1A43A 1CEIA 1M6NA 2JYGA 4WYMA 1RO0A 4U0DA 2JU1A 1M90Q 2PEOA 2MVUA 2WPTA 1IMQA 3G4SP 2GDWA 3CCSP 2LL8A 2N6YA 2VLNA 2M5RA 2GZJA 2LPKA 2KGCA 3DTJA 3CD6P 1GXGA 3DS1A 3GZLA 5HV8A 5BS2A 3CC2P 2GZEA 2K94A 2AFEA 2FVAA 2LMLA 3G71P 2DNWA 1VQKP 2Z46A 1ZNVA 1YI2P 2PEMA 4BPFA 2GDXA 2KG6A 3GJNA 2K5XA 1VQ5P 2QA4P 2JGPA 2KGAA 1Q81Q 2FQ0A 3NTEA 1OR5A 2VLQA 4QNBA 3CCQP 3HZQA 2N50A 4BPHA 5KP7B 1EIAA 2EHTA 2MR7A 2Z44A 2KR5A 4M0IA 1VQ4P 2K2QA 3H47A 1Q82Q 1FR2A 1GPJA 2CNRA 2ERHA 5HVCA 2GDYA 2PEJA 4U0CA 5KP8B 1VQOP 2XZ0D 3RG6C 2M8NA 4U0AA 1M74A 3DS4A 2LKIA 1BAJA 2CG5B 1L0HA 5F2KA 2JBGA 3B5IA 3WBHA 3VRLC 4NEOA 3RG2A 1NJIQ 1YHQP 3G0VA 4F37A 4COCA 3DS2A 3G26A 4XRQA 1ZMBA 2JQ4A 3CC4P 1E0HA 2N5IA 5EW5E 3DS3A 3H0DA 5F2NA 2L6EA 2KODA 4PWVB 2FHSC 2VSQA 2GZIA 1JJ2O 1Z6MA 1VQLP 4BPGA 2QEXP 4PH0A 1D1DA 2KOPA 1KC8Q 2LOLA 3CCUP 3OW2O 1IMPA 4IZ6A 1A8OA 2JYLA 1VQNP 2X2BA 2FQ1A 1RNIA 4H2WC 2FADA 2PNGA 3DS5A 2EIAA 1N8RQ 1VQ6P 2AF8A 2LIWA 2MVVA 3CCLP 5HGNA 3GZMA 3E2DA 4H2YC 1Q86Q 3G28A 1GXHA 2QNWA 1QVGO 2Z45A 2KORA 1K9MQ 1AUMA 2KOSA 2VLOA 1E6JP 3CPWO 1YJWP 1T8KA 4XFXA 1EOQA 4UHPB 4R0MA 1S72P 3LMOA 2MY5A 2P9XA 4DG9A 3G6EP 1DV5A 1QVFO 5I4TG 2EG5A 3G1IA 2FVFA 1M6EX 2L22A 1YITP 3B4QA 1UNKA 2AVAA 2L0QA 1KQSO 2PENA 1K73Q 1IUQA 2GYKA 3LRYA 2L4BA 4XFYA 4MRTC 3GKLC 3CCMP 2EFJA 5DCKA 1W2BO 1YJNP 1VHNA 1F80D 2N6ZA 4CA3A 2N98A 1VQMP 3EJEA 4COPA 2M8PA 1YJ9P 3CCJP 1X3OA 2FAEA 2KOOA 2KWLA 4GR2A 5JPAA 3I55P 2K93A 3H4EA 1HY8A 4XROA 1VQ9P 2KOQA 2PEIA 1M1KQ 1YIJP 1VQPP 2JO0A 2FQ2A 2XV6A 3HYBA 1DNYA 2PEKA 1AF8A 1AYIA 2PEQA 3G1GA 1HQBA 2JAZA 3CXCO 3G29A
chains in the Genus database with same CATH topology
2KORA 1VKUA 2K2QA 1KLPA 4H2XC 2KOSA 2K92A 2AFDA 5CZDB 2CNRA 2MR8A 2N5HA 2CQ8A 5HVCA 2GDYA 2LTEA 1T8KA 2KG9A 1NQ4A 2K0XA 2JU2A 5KP8B 1L0IA 2ROQA 2XZ0D 2KGEA 2FVEA 2KGDA 4R0MA 2JU1A 2LKIA 2CG5B 1L0HA 2KW2A 3LMOA 2MY5A 2MVUA 2GDWA 3EJDA 4DG9A 2LL8A 2N6YA 4NEOA 1DV5A 3RG2A 2M5RA 2CGQA 2L9FA 2FVFA 2LPKA 5EJDA 2L22A 2KGCA 2AVAA 2L0QA 3GZLA 1ACPA 2FACA 2JQ4A 2N5IA 2L4BA 4HKGA 5HV8A 4MRTC 4PWVB 2K94A 5KP6B 2LIUA 2XZ1C 2AFEA 2FVAA 2FHSC 2VSQA 1F80D 2LMLA 2N6ZA 2DNWA 4CA3A 3EJBA 4BPGA 2N98A 3EJEA 4BPFA 2GDXA 2KOPA 4PXHB 2KG6A 1X3OA 2FAEA 2LOLA 2KOOA 2KWLA 3NY7B 4IZ6A 2JGPA 2KGAA 2K93A 2X2BA 1HY8A 2FQ1A 3CE7A 2FQ0A 2FADA 2PNGA 4H2WC 1OR5A 2EHSA 2K0YA 2KOQA 2AF8A 2LIWA 2MVVA 2FQ2A 2N50A 4BPHA 3GZMA 5KP7B 1DNYA 1AF8A 4H2YC 2MD9A 2EHTA 2MR7A 2KR5A 1HQBA 2QNWA 2MF4A 2KG8A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2KOR A;  1VKU A;  2K2Q A;  1KLP A;  4H2X C;  2KOS A;  2K92 A;  2AFD A;  5CZD B;  2CNR A;  2MR8 A;  2N5H A;  2CQ8 A;  5HVC A;  2GDY A;  2LTE A;  1T8K A;  2KG9 A;  1NQ4 A;  2K0X A;  2JU2 A;  5KP8 B;  1L0I A;  2ROQ A;  2XZ0 D;  2KGE A;  2FVE A;  2KGD A;  4R0M A;  2JU1 A;  2LKI A;  2CG5 B;  1L0H A;  2KW2 A;  3LMO A;  2MY5 A;  2MVU A;  2GDW A;  3EJD A;  4DG9 A;  2LL8 A;  2N6Y A;  4NEO A;  1DV5 A;  3RG2 A;  2M5R A;  2CGQ A;  2L9F A;  2FVF A;  2LPK A;  5EJD A;  2L22 A;  2KGC A;  2AVA A;  2L0Q A;  3GZL A;  1ACP A;  2FAC A;  2JQ4 A;  2N5I A;  2L4B A;  4HKG A;  5HV8 A;  4MRT C;  4PWV B;  2K94 A;  5KP6 B;  2LIU A;  2XZ1 C;  2AFE A;  2FVA A;  2FHS C;  2VSQ A;  1F80 D;  2LML A;  2N6Z A;  2DNW A;  4CA3 A;  3EJB A;  4BPG A;  2N98 A;  3EJE A;  4BPF A;  2GDX A;  2KOP A;  4PXH B;  2KG6 A;  1X3O A;  2FAE A;  2LOL A;  2KOO A;  2KWL A;  3NY7 B;  4IZ6 A;  2JGP A;  2KGA A;  2K93 A;  2X2B A;  1HY8 A;  2FQ1 A;  3CE7 A;  2FQ0 A;  2FAD A;  2PNG A;  4H2W C;  1OR5 A;  2EHS A;  2K0Y A;  2KOQ A;  2AF8 A;  2LIW A;  2MVV A;  2FQ2 A;  2N50 A;  4BPH A;  3GZM A;  5KP7 B;  1DNY A;  1AF8 A;  4H2Y C;  2MD9 A;  2EHT A;  2MR7 A;  2KR5 A;  1HQB A;  2QNW A;  2MF4 A;  2KG8 A; 
#chains in the Genus database with same CATH topology
 1RO2 A;  4PH1 A;  1KLP A;  4H2X C;  3CCE P;  2M8L A;  2AFD A;  5CZD B;  2N5H A;  1EMV A;  2LTE A;  2KG9 A;  2GZF A;  1L0I A;  2ROQ A;  2KGE A;  2FVE A;  2KGD A;  4QKO A;  2KW2 A;  2NO8 A;  3P05 A;  3U43 A;  1KD1 Q;  2XT1 A;  1QRJ A;  1VQ8 P;  2CGQ A;  4U0F A;  2L9F A;  2BHV A;  3DPH A;  5EJD A;  4U0E A;  1ACP A;  3G21 A;  2FAC A;  2LF4 A;  5BS1 A;  1K30 A;  2ONT A;  3CCV P;  2GZG A;  2JB0 A;  1BXI A;  4HKG A;  5HGL A;  3M1M A;  4XFZ A;  3CC7 P;  4IPY A;  5KP6 B;  2LIU A;  2XZ1 C;  2VLP A;  1MZ8 A;  2K0D X;  3EJB A;  2OTL P;  2DGY A;  2E1M A;  3CCR P;  4PXH B;  3I56 P;  3NY7 B;  2CWO A;  5F2O A;  3CMA P;  2XXM A;  3CE7 A;  2EHS A;  1Q7Y Q;  2K0Y A;  2KG8 A;  3DS0 A;  5HGO A;  1VQ7 P;  4GR6 A;  2MD9 A;  1K8A Q;  2MF4 A;  7CEI A;  3EJD A;  1UJZ A;  5HGM A;  1VKU A;  3Q20 A;  4U0B A;  2K92 A;  3MGE A;  2OTJ P;  2MR8 A;  2OAR A;  2CQ8 A;  2BUO A;  2PY8 A;  3CME P;  1NQ4 A;  2K0X A;  2JU2 A;  1A43 A;  1CEI A;  1M6N A;  2JYG A;  4WYM A;  1RO0 A;  4U0D A;  2JU1 A;  1M90 Q;  2PEO A;  2MVU A;  2WPT A;  1IMQ A;  3G4S P;  2GDW A;  3CCS P;  2LL8 A;  2N6Y A;  2VLN A;  2M5R A;  2GZJ A;  2LPK A;  2KGC A;  3DTJ A;  3CD6 P;  1GXG A;  3DS1 A;  3GZL A;  5HV8 A;  5BS2 A;  3CC2 P;  2GZE A;  2K94 A;  2AFE A;  2FVA A;  2LML A;  3G71 P;  2DNW A;  1VQK P;  2Z46 A;  1ZNV A;  1YI2 P;  2PEM A;  4BPF A;  2GDX A;  2KG6 A;  3GJN A;  2K5X A;  1VQ5 P;  2QA4 P;  2JGP A;  2KGA A;  1Q81 Q;  2FQ0 A;  3NTE A;  1OR5 A;  2VLQ A;  4QNB A;  3CCQ P;  3HZQ A;  2N50 A;  4BPH A;  5KP7 B;  1EIA A;  2EHT A;  2MR7 A;  2Z44 A;  2KR5 A;  4M0I A;  1VQ4 P;  2K2Q A;  3H47 A;  1Q82 Q;  1FR2 A;  1GPJ A;  2CNR A;  2ERH A;  5HVC A;  2GDY A;  2PEJ A;  4U0C A;  5KP8 B;  1VQO P;  2XZ0 D;  3RG6 C;  2M8N A;  4U0A A;  1M74 A;  3DS4 A;  2LKI A;  1BAJ A;  2CG5 B;  1L0H A;  5F2K A;  2JBG A;  3B5I A;  3WBH A;  3VRL C;  4NEO A;  3RG2 A;  1NJI Q;  1YHQ P;  3G0V A;  4F37 A;  4COC A;  3DS2 A;  3G26 A;  4XRQ A;  1ZMB A;  2JQ4 A;  3CC4 P;  1E0H A;  2N5I A;  5EW5 E;  3DS3 A;  3H0D A;  5F2N A;  2L6E A;  2KOD A;  4PWV B;  2FHS C;  2VSQ A;  2GZI A;  1JJ2 O;  1Z6M A;  1VQL P;  4BPG A;  2QEX P;  4PH0 A;  1D1D A;  2KOP A;  1KC8 Q;  2LOL A;  3CCU P;  3OW2 O;  1IMP A;  4IZ6 A;  1A8O A;  2JYL A;  1VQN P;  2X2B A;  2FQ1 A;  1RNI A;  4H2W C;  2FAD A;  2PNG A;  3DS5 A;  2EIA A;  1N8R Q;  1VQ6 P;  2AF8 A;  2LIW A;  2MVV A;  3CCL P;  5HGN A;  3GZM A;  3E2D A;  4H2Y C;  1Q86 Q;  3G28 A;  1GXH A;  2QNW A;  1QVG O;  2Z45 A;  2KOR A;  1K9M Q;  1AUM A;  2KOS A;  2VLO A;  1E6J P;  3CPW O;  1YJW P;  1T8K A;  4XFX A;  1EOQ A;  4UHP B;  4R0M A;  1S72 P;  3LMO A;  2MY5 A;  2P9X A;  4DG9 A;  3G6E P;  1DV5 A;  1QVF O;  5I4T G;  2EG5 A;  3G1I A;  2FVF A;  1M6E X;  2L22 A;  1YIT P;  3B4Q A;  1UNK A;  2AVA A;  2L0Q A;  1KQS O;  2PEN A;  1K73 Q;  1IUQ A;  2GYK A;  3LRY A;  2L4B A;  4XFY A;  4MRT C;  3GKL C;  3CCM P;  2EFJ A;  5DCK A;  1W2B O;  1YJN P;  1VHN A;  1F80 D;  2N6Z A;  4CA3 A;  2N98 A;  1VQM P;  3EJE A;  4COP A;  2M8P A;  1YJ9 P;  3CCJ P;  1X3O A;  2FAE A;  2KOO A;  2KWL A;  4GR2 A;  5JPA A;  3I55 P;  2K93 A;  3H4E A;  1HY8 A;  4XRO A;  1VQ9 P;  2KOQ A;  2PEI A;  1M1K Q;  1YIJ P;  1VQP P;  2JO0 A;  2FQ2 A;  2XV6 A;  3HYB A;  1DNY A;  2PEK A;  1AF8 A;  1AYI A;  2PEQ A;  3G1G A;  1HQB A;  2JAZ A;  3CXC O;  3G29 A; 
#chains in the Genus database with same CATH homology
 2KOR A;  1VKU A;  2K2Q A;  1KLP A;  4H2X C;  2KOS A;  2K92 A;  2AFD A;  5CZD B;  2CNR A;  2MR8 A;  2N5H A;  2CQ8 A;  5HVC A;  2GDY A;  2LTE A;  1T8K A;  2KG9 A;  1NQ4 A;  2K0X A;  2JU2 A;  5KP8 B;  1L0I A;  2ROQ A;  2XZ0 D;  2KGE A;  2FVE A;  2KGD A;  4R0M A;  2JU1 A;  2LKI A;  2CG5 B;  1L0H A;  2KW2 A;  3LMO A;  2MY5 A;  2MVU A;  2GDW A;  3EJD A;  4DG9 A;  2LL8 A;  2N6Y A;  4NEO A;  1DV5 A;  3RG2 A;  2M5R A;  2CGQ A;  2L9F A;  2FVF A;  2LPK A;  5EJD A;  2L22 A;  2KGC A;  2AVA A;  2L0Q A;  3GZL A;  1ACP A;  2FAC A;  2JQ4 A;  2N5I A;  2L4B A;  4HKG A;  5HV8 A;  4MRT C;  4PWV B;  2K94 A;  5KP6 B;  2LIU A;  2XZ1 C;  2AFE A;  2FVA A;  2FHS C;  2VSQ A;  1F80 D;  2LML A;  2N6Z A;  2DNW A;  4CA3 A;  3EJB A;  4BPG A;  2N98 A;  3EJE A;  4BPF A;  2GDX A;  2KOP A;  4PXH B;  2KG6 A;  1X3O A;  2FAE A;  2LOL A;  2KOO A;  2KWL A;  3NY7 B;  4IZ6 A;  2JGP A;  2KGA A;  2K93 A;  2X2B A;  1HY8 A;  2FQ1 A;  3CE7 A;  2FQ0 A;  2FAD A;  2PNG A;  4H2W C;  1OR5 A;  2EHS A;  2K0Y A;  2KOQ A;  2AF8 A;  2LIW A;  2MVV A;  2FQ2 A;  2N50 A;  4BPH A;  3GZM A;  5KP7 B;  1DNY A;  1AF8 A;  4H2Y C;  2MD9 A;  2EHT A;  2MR7 A;  2KR5 A;  1HQB A;  2QNW A;  2MF4 A;  2KG8 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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