2KG9A

Nmr solution structures of butyryl-acp (a non-polar, non pathway intermediate) from the actinorhodin polyketide synthase in streptomyces coelicolor
Total Genus 23
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
23
sequence length
86
structure length
86
Chain Sequence
MATLLTTDDLRRALVESAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Actinorhodin polyketide synthase acyl carrier protein
publication title Probing the Interactions of Early Polyketide Intermediates with the Actinorhodin ACP from S. coelicolor A3(2).
pubmed doi rcsb
source organism Streptomyces coelicolor
molecule tags Biosynthetic protein
total genus 23
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 2009-03-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2kg9A00
4BPHA 4PWVB 3CE7A 2LIUA 2AFDA 2MF4A 1F80D 3EJDA 1DV5A 2N5IA 3GZLA 2KW2A 2KG9A 2FADA 2XZ0D 1KLPA 1OR5A 2JGPA 2VSQA 2MR7A 2K93A 4H2YC 5HV8A 2K2QA 1AF8A 2KR5A 2K0YA 4MRTC 4DG9A 2M5RA 2K92A 5KP6B 2KGCA 2K94A 2MR8A 2N5HA 2N50A 2AF8A 1HY8A 2ROQA 1VKUA 1DNYA 2CNRA 2MVUA 2GDXA 2KGAA 1L0HA 4H2XC 2N6ZA 2GDWA 2AVAA 1NQ4A 2KOPA 3EJBA 2LKIA 2L22A 2CQ8A 2FQ1A 2FQ0A 2KOQA 3GZMA 2CGQA 4BPGA 3EJEA 4IZ6A 2KGEA 2MY5A 5KP8B 2QNWA 2GDYA 4PXHB 2JU1A 2KGDA 5EJDA 2FVAA 4H2WC 2JQ4A 2KOOA 1X3OA 2KWLA 2K0XA 3RG2A 2DNWA 2FQ2A 5CZDB 2KG8A 2PNGA 2LTEA 5HVCA 2LOLA 4HKGA 4BPFA 3NY7B 2X2BA 2EHSA 2LL8A 2KOSA 2FVFA 2N6YA 2MVVA 1L0IA 2JU2A 5KP7B 2L4BA 1ACPA 2FAEA 2FACA 4NEOA 2AFEA 2FVEA 2LMLA 3LMOA 1T8KA 2LIWA 2XZ1C 2KG6A 4R0MA 2L9FA 4CA3A 2CG5B 2EHTA 2MD9A 2L0QA 2N98A 1HQBA 2LPKA 2KORA 2FHSC
chains in the Genus database with same CATH superfamily
4BPHA 3EJDA 1DV5A 2N5IA 1VQ8P 2GYKA 3GZLA 2VLOA 3GKLC 4U0DA 3CCLP 1VQ5P 4U0FA 2K93A 3CCSP 3G21A 2JYGA 2VLQA 2MR8A 1HY8A 1EIAA 2GDXA 1YJ9P 1K73Q 3U43A 1QVFO 2JYLA 2PEQA 3EJBA 4U0EA 4WYMA 3G71P 3CCRP 2OTLP 1N8RQ 3H4EA 1GXHA 1VQ9P 2GDYA 5EW5E 2KGDA 2JO0A 4H2WC 2K0XA 4XROA 5CZDB 5HVCA 4BPFA 5HGLA 3HZQA 1JJ2O 4XRQA 2FVFA 2GZJA 2L4BA 1K8AQ 4GR6A 2AFEA 1CEIA 3H0DA 2XZ1C 4R0MA 3G6EP 3G1GA 1VQOP 1MZ8A 2LPKA 1NJIQ 3CMEP 1IMPA 1VHNA 2QA4P 4PWVB 1S72P 2LIUA 2AFDA 2MF4A 3CCEP 1VQNP 2Z46A 3CCQP 1BXIA 3G0VA 4GR2A 2VSQA 5BS2A 2M8PA 3G29A 4MRTC 3P05A 1W2BO 5KP6B 5I4TG 1EMVA 2AF8A 3B4QA 1E6JP 2MVUA 3CCJP 1VQ7P 5HGNA 2LKIA 2FQ1A 4BPGA 2KGEA 2MY5A 2L6EA 2E1MA 1AUMA 1YI2P 2JQ4A 5BS1A 2KOOA 4IPYA 1X3OA 2EIAA 2JBGA 3DTJA 2DNWA 4QKOA 2LTEA 3CCMP 2LOLA 3RG6C 3NY7B 1UNKA 2LL8A 2KOSA 1VQ6P 2VLPA 2JAZA 5F2NA 2ONTA 4COPA 2MVVA 1RO0A 1QRJA 1IUQA 5JPAA 2P9XA 4QNBA 2FACA 2PY8A 2ERHA 3LMOA 1T8KA 3CC7P 2LIWA 1Z6MA 2L9FA 2Z45A 2EHTA 1RNIA 2MD9A 2PEJA 1D1DA 1GXGA 2KORA 2FHSC 1VQLP 1Q86Q 3DS5A 3GJNA 1K30A 2BUOA 4COCA 3NTEA 2PENA 2K0DX 2XZ0D 1KLPA 2MR7A 1RO2A 1AF8A 2KR5A 4DG9A 3DS3A 2OTJP 5HGOA 2EFJA 2DGYA 2N50A 1E0HA 2ROQA 1VQPP 1VKUA 1YIJP 1M6NA 1L0HA 4H2XC 3CCUP 2NO8A 1M1KQ 2JB0A 1M90Q 2AVAA 1NQ4A 1Q82Q 2KOPA 4UHPB 2L22A 2CQ8A 2FQ0A 4PH0A 3GZMA 2CGQA 2VLNA 4IZ6A 1EOQA 5KP8B 3DS4A 2KODA 2QNWA 3G28A 2PEMA 4XFXA 2CWOA 5EJDA 3H47A 2FVAA 3Q20A 1YITP 1Q7YQ 1M6EX 2EG5A 1A8OA 2QEXP 1FR2A 4HKGA 1IMQA 4U0CA 3G1IA 2X2BA 3M1MA 2EHSA 2XT1A 2XV6A 5DCKA 3DPHA 2K5XA 1VQMP 2OARA 3LRYA 5KP7B 3I55P 4U0AA 1UJZA 1YHQP 4NEOA 1YJWP 2FVEA 2LMLA 3B5IA 1GPJA 2PEOA 2CG5B 3CPWO 2L0QA 1VQ4P 1ZMBA 3CE7A 2M8LA 2PEKA 1F80D 1KC8Q 1AYIA 3HYBA 2KW2A 1A43A 3I56P 7CEIA 2KG9A 2FADA 1OR5A 2JGPA 3E2DA 4H2YC 5HV8A 2K2QA 2LF4A 2K0YA 2M5RA 3DS2A 3MGEA 2K92A 4XFZA 3DS0A 2KGCA 2K94A 1K9MQ 2N5HA 4XFYA 3CC4P 3CXCO 1DNYA 2CNRA 2GZFA 2KGAA 2N6ZA 2GDWA 2GZGA 4M0IA 5F2OA 2KOQA 3EJEA 2M8NA 4PXHB 2JU1A 3CC2P 1Q81Q 2GZIA 1ZNVA 3VRLC 3CMAP 2KWLA 2BHVA 1VQKP 3G4SP 3RG2A 2XXMA 4PH1A 2WPTA 2FQ2A 2KG8A 2PNGA 1QVGO 2Z44A 3OW2O 3WBHA 2N6YA 1L0IA 3CCVP 2JU2A 2GZEA 1ACPA 2FAEA 4U0BA 3DS1A 1YJNP 2KG6A 1M74A 3G26A 3CD6P 4CA3A 2N98A 1KD1Q 1HQBA 2PEIA 4F37A 1BAJA 5F2KA 5HGMA 1KQSO
chains in the Genus database with same CATH topology
4BPHA 4PWVB 3CE7A 2LIUA 2AFDA 2MF4A 1F80D 3EJDA 1DV5A 2N5IA 3GZLA 2KW2A 2KG9A 2FADA 2XZ0D 1KLPA 1OR5A 2JGPA 2VSQA 2MR7A 2K93A 4H2YC 5HV8A 2K2QA 1AF8A 2KR5A 2K0YA 4MRTC 4DG9A 2M5RA 2K92A 5KP6B 2KGCA 2K94A 2MR8A 2N5HA 2N50A 2AF8A 1HY8A 2ROQA 1VKUA 1DNYA 2CNRA 2MVUA 2GDXA 2KGAA 1L0HA 4H2XC 2N6ZA 2GDWA 2AVAA 1NQ4A 2KOPA 3EJBA 2LKIA 2L22A 2CQ8A 2FQ1A 2FQ0A 2KOQA 3GZMA 2CGQA 4BPGA 3EJEA 4IZ6A 2KGEA 2MY5A 5KP8B 2QNWA 2GDYA 4PXHB 2JU1A 2KGDA 5EJDA 2FVAA 4H2WC 2JQ4A 2KOOA 1X3OA 2KWLA 2K0XA 3RG2A 2DNWA 2FQ2A 5CZDB 2KG8A 2PNGA 2LTEA 5HVCA 2LOLA 4HKGA 4BPFA 3NY7B 2X2BA 2EHSA 2LL8A 2KOSA 2FVFA 2N6YA 2MVVA 1L0IA 2JU2A 5KP7B 2L4BA 1ACPA 2FAEA 2FACA 4NEOA 2AFEA 2FVEA 2LMLA 3LMOA 1T8KA 2LIWA 2XZ1C 2KG6A 4R0MA 2L9FA 4CA3A 2CG5B 2EHTA 2MD9A 2L0QA 2N98A 1HQBA 2LPKA 2KORA 2FHSC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4BPH A;  4PWV B;  3CE7 A;  2LIU A;  2AFD A;  2MF4 A;  1F80 D;  3EJD A;  1DV5 A;  2N5I A;  3GZL A;  2KW2 A;  2KG9 A;  2FAD A;  2XZ0 D;  1KLP A;  1OR5 A;  2JGP A;  2VSQ A;  2MR7 A;  2K93 A;  4H2Y C;  5HV8 A;  2K2Q A;  1AF8 A;  2KR5 A;  2K0Y A;  4MRT C;  4DG9 A;  2M5R A;  2K92 A;  5KP6 B;  2KGC A;  2K94 A;  2MR8 A;  2N5H A;  2N50 A;  2AF8 A;  1HY8 A;  2ROQ A;  1VKU A;  1DNY A;  2CNR A;  2MVU A;  2GDX A;  2KGA A;  1L0H A;  4H2X C;  2N6Z A;  2GDW A;  2AVA A;  1NQ4 A;  2KOP A;  3EJB A;  2LKI A;  2L22 A;  2CQ8 A;  2FQ1 A;  2FQ0 A;  2KOQ A;  3GZM A;  2CGQ A;  4BPG A;  3EJE A;  4IZ6 A;  2KGE A;  2MY5 A;  5KP8 B;  2QNW A;  2GDY A;  4PXH B;  2JU1 A;  2KGD A;  5EJD A;  2FVA A;  4H2W C;  2JQ4 A;  2KOO A;  1X3O A;  2KWL A;  2K0X A;  3RG2 A;  2DNW A;  2FQ2 A;  5CZD B;  2KG8 A;  2PNG A;  2LTE A;  5HVC A;  2LOL A;  4HKG A;  4BPF A;  3NY7 B;  2X2B A;  2EHS A;  2LL8 A;  2KOS A;  2FVF A;  2N6Y A;  2MVV A;  1L0I A;  2JU2 A;  5KP7 B;  2L4B A;  1ACP A;  2FAE A;  2FAC A;  4NEO A;  2AFE A;  2FVE A;  2LML A;  3LMO A;  1T8K A;  2LIW A;  2XZ1 C;  2KG6 A;  4R0M A;  2L9F A;  4CA3 A;  2CG5 B;  2EHT A;  2MD9 A;  2L0Q A;  2N98 A;  1HQB A;  2LPK A;  2KOR A;  2FHS C; 
#chains in the Genus database with same CATH topology
 4BPH A;  3EJD A;  1DV5 A;  2N5I A;  1VQ8 P;  2GYK A;  3GZL A;  2VLO A;  3GKL C;  4U0D A;  3CCL P;  1VQ5 P;  4U0F A;  2K93 A;  3CCS P;  3G21 A;  2JYG A;  2VLQ A;  2MR8 A;  1HY8 A;  1EIA A;  2GDX A;  1YJ9 P;  1K73 Q;  3U43 A;  1QVF O;  2JYL A;  2PEQ A;  3EJB A;  4U0E A;  4WYM A;  3G71 P;  3CCR P;  2OTL P;  1N8R Q;  3H4E A;  1GXH A;  1VQ9 P;  2GDY A;  5EW5 E;  2KGD A;  2JO0 A;  4H2W C;  2K0X A;  4XRO A;  5CZD B;  5HVC A;  4BPF A;  5HGL A;  3HZQ A;  1JJ2 O;  4XRQ A;  2FVF A;  2GZJ A;  2L4B A;  1K8A Q;  4GR6 A;  2AFE A;  1CEI A;  3H0D A;  2XZ1 C;  4R0M A;  3G6E P;  3G1G A;  1VQO P;  1MZ8 A;  2LPK A;  1NJI Q;  3CME P;  1IMP A;  1VHN A;  2QA4 P;  4PWV B;  1S72 P;  2LIU A;  2AFD A;  2MF4 A;  3CCE P;  1VQN P;  2Z46 A;  3CCQ P;  1BXI A;  3G0V A;  4GR2 A;  2VSQ A;  5BS2 A;  2M8P A;  3G29 A;  4MRT C;  3P05 A;  1W2B O;  5KP6 B;  5I4T G;  1EMV A;  2AF8 A;  3B4Q A;  1E6J P;  2MVU A;  3CCJ P;  1VQ7 P;  5HGN A;  2LKI A;  2FQ1 A;  4BPG A;  2KGE A;  2MY5 A;  2L6E A;  2E1M A;  1AUM A;  1YI2 P;  2JQ4 A;  5BS1 A;  2KOO A;  4IPY A;  1X3O A;  2EIA A;  2JBG A;  3DTJ A;  2DNW A;  4QKO A;  2LTE A;  3CCM P;  2LOL A;  3RG6 C;  3NY7 B;  1UNK A;  2LL8 A;  2KOS A;  1VQ6 P;  2VLP A;  2JAZ A;  5F2N A;  2ONT A;  4COP A;  2MVV A;  1RO0 A;  1QRJ A;  1IUQ A;  5JPA A;  2P9X A;  4QNB A;  2FAC A;  2PY8 A;  2ERH A;  3LMO A;  1T8K A;  3CC7 P;  2LIW A;  1Z6M A;  2L9F A;  2Z45 A;  2EHT A;  1RNI A;  2MD9 A;  2PEJ A;  1D1D A;  1GXG A;  2KOR A;  2FHS C;  1VQL P;  1Q86 Q;  3DS5 A;  3GJN A;  1K30 A;  2BUO A;  4COC A;  3NTE A;  2PEN A;  2K0D X;  2XZ0 D;  1KLP A;  2MR7 A;  1RO2 A;  1AF8 A;  2KR5 A;  4DG9 A;  3DS3 A;  2OTJ P;  5HGO A;  2EFJ A;  2DGY A;  2N50 A;  1E0H A;  2ROQ A;  1VQP P;  1VKU A;  1YIJ P;  1M6N A;  1L0H A;  4H2X C;  3CCU P;  2NO8 A;  1M1K Q;  2JB0 A;  1M90 Q;  2AVA A;  1NQ4 A;  1Q82 Q;  2KOP A;  4UHP B;  2L22 A;  2CQ8 A;  2FQ0 A;  4PH0 A;  3GZM A;  2CGQ A;  2VLN A;  4IZ6 A;  1EOQ A;  5KP8 B;  3DS4 A;  2KOD A;  2QNW A;  3G28 A;  2PEM A;  4XFX A;  2CWO A;  5EJD A;  3H47 A;  2FVA A;  3Q20 A;  1YIT P;  1Q7Y Q;  1M6E X;  2EG5 A;  1A8O A;  2QEX P;  1FR2 A;  4HKG A;  1IMQ A;  4U0C A;  3G1I A;  2X2B A;  3M1M A;  2EHS A;  2XT1 A;  2XV6 A;  5DCK A;  3DPH A;  2K5X A;  1VQM P;  2OAR A;  3LRY A;  5KP7 B;  3I55 P;  4U0A A;  1UJZ A;  1YHQ P;  4NEO A;  1YJW P;  2FVE A;  2LML A;  3B5I A;  1GPJ A;  2PEO A;  2CG5 B;  3CPW O;  2L0Q A;  1VQ4 P;  1ZMB A;  3CE7 A;  2M8L A;  2PEK A;  1F80 D;  1KC8 Q;  1AYI A;  3HYB A;  2KW2 A;  1A43 A;  3I56 P;  7CEI A;  2KG9 A;  2FAD A;  1OR5 A;  2JGP A;  3E2D A;  4H2Y C;  5HV8 A;  2K2Q A;  2LF4 A;  2K0Y A;  2M5R A;  3DS2 A;  3MGE A;  2K92 A;  4XFZ A;  3DS0 A;  2KGC A;  2K94 A;  1K9M Q;  2N5H A;  4XFY A;  3CC4 P;  3CXC O;  1DNY A;  2CNR A;  2GZF A;  2KGA A;  2N6Z A;  2GDW A;  2GZG A;  4M0I A;  5F2O A;  2KOQ A;  3EJE A;  2M8N A;  4PXH B;  2JU1 A;  3CC2 P;  1Q81 Q;  2GZI A;  1ZNV A;  3VRL C;  3CMA P;  2KWL A;  2BHV A;  1VQK P;  3G4S P;  3RG2 A;  2XXM A;  4PH1 A;  2WPT A;  2FQ2 A;  2KG8 A;  2PNG A;  1QVG O;  2Z44 A;  3OW2 O;  3WBH A;  2N6Y A;  1L0I A;  3CCV P;  2JU2 A;  2GZE A;  1ACP A;  2FAE A;  4U0B A;  3DS1 A;  1YJN P;  2KG6 A;  1M74 A;  3G26 A;  3CD6 P;  4CA3 A;  2N98 A;  1KD1 Q;  1HQB A;  2PEI A;  4F37 A;  1BAJ A;  5F2K A;  5HGM A;  1KQS O; 
#chains in the Genus database with same CATH homology
 4BPH A;  4PWV B;  3CE7 A;  2LIU A;  2AFD A;  2MF4 A;  1F80 D;  3EJD A;  1DV5 A;  2N5I A;  3GZL A;  2KW2 A;  2KG9 A;  2FAD A;  2XZ0 D;  1KLP A;  1OR5 A;  2JGP A;  2VSQ A;  2MR7 A;  2K93 A;  4H2Y C;  5HV8 A;  2K2Q A;  1AF8 A;  2KR5 A;  2K0Y A;  4MRT C;  4DG9 A;  2M5R A;  2K92 A;  5KP6 B;  2KGC A;  2K94 A;  2MR8 A;  2N5H A;  2N50 A;  2AF8 A;  1HY8 A;  2ROQ A;  1VKU A;  1DNY A;  2CNR A;  2MVU A;  2GDX A;  2KGA A;  1L0H A;  4H2X C;  2N6Z A;  2GDW A;  2AVA A;  1NQ4 A;  2KOP A;  3EJB A;  2LKI A;  2L22 A;  2CQ8 A;  2FQ1 A;  2FQ0 A;  2KOQ A;  3GZM A;  2CGQ A;  4BPG A;  3EJE A;  4IZ6 A;  2KGE A;  2MY5 A;  5KP8 B;  2QNW A;  2GDY A;  4PXH B;  2JU1 A;  2KGD A;  5EJD A;  2FVA A;  4H2W C;  2JQ4 A;  2KOO A;  1X3O A;  2KWL A;  2K0X A;  3RG2 A;  2DNW A;  2FQ2 A;  5CZD B;  2KG8 A;  2PNG A;  2LTE A;  5HVC A;  2LOL A;  4HKG A;  4BPF A;  3NY7 B;  2X2B A;  2EHS A;  2LL8 A;  2KOS A;  2FVF A;  2N6Y A;  2MVV A;  1L0I A;  2JU2 A;  5KP7 B;  2L4B A;  1ACP A;  2FAE A;  2FAC A;  4NEO A;  2AFE A;  2FVE A;  2LML A;  3LMO A;  1T8K A;  2LIW A;  2XZ1 C;  2KG6 A;  4R0M A;  2L9F A;  4CA3 A;  2CG5 B;  2EHT A;  2MD9 A;  2L0Q A;  2N98 A;  1HQB A;  2LPK A;  2KOR A;  2FHS C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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