2KG9A

Nmr solution structures of butyryl-acp (a non-polar, non pathway intermediate) from the actinorhodin polyketide synthase in streptomyces coelicolor
Total Genus 23
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
23
sequence length
86
structure length
86
Chain Sequence
MATLLTTDDLRRALVESAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Actinorhodin polyketide synthase acyl carrier protein
publication title Probing the Interactions of Early Polyketide Intermediates with the Actinorhodin ACP from S. coelicolor A3(2).
pubmed doi rcsb
source organism Streptomyces coelicolor
molecule tags Biosynthetic protein
total genus 23
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 2009-03-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2kg9A00
3GZLA 2KOQA 5KP7B 2EHTA 2KG6A 2K93A 2KR5A 4H2YC 2K2QA 1HQBA 4H2WC 2EHSA 2KOSA 2JU2A 2KGCA 2MD9A 3RG2A 2N5HA 2LPKA 2KW2A 2MR7A 2N50A 5HVCA 2KGEA 2FQ1A 2L4BA 4H2XC 2KG9A 2KORA 2JU1A 2AFDA 2DNWA 4HKGA 2AF8A 1NQ4A 2K94A 2FVAA 2FACA 1HY8A 3EJDA 4PXHB 4CA3A 2AVAA 2KGDA 2N6ZA 2LIUA 2MR8A 1F80D 2CQ8A 1X3OA 2FQ2A 2CNRA 4BPGA 2LL8A 2GDXA 2FHSC 2XZ0D 3EJEA 2MVUA 5KP8B 2CG5B 1OR5A 2GDWA 2L0QA 3CE7A 4NEOA 2LMLA 1AF8A 1L0IA 1T8KA 1KLPA 2M5RA 2JQ4A 3EJBA 1DNYA 1L0HA 2FQ0A 2KWLA 4PWVB 2N5IA 2N98A 4DG9A 2VSQA 2KOPA 2LTEA 2K92A 2K0XA 2JGPA 2LKIA 2ROQA 2KOOA 2FADA 1DV5A 2CGQA 3NY7B 4BPHA 2K0YA 2LOLA 4BPFA 4R0MA 2AFEA 1VKUA 4MRTC 1ACPA 2MY5A 2PNGA 3GZMA 2L22A 5EJDA 2GDYA 2XZ1C 2LIWA 2MF4A 2N6YA 4IZ6A 3LMOA 2FAEA 2MVVA 2L9FA 2QNWA 5HV8A 5KP6B 2X2BA 2KG8A 2KGAA 2FVEA 5CZDB 2FVFA
chains in the Genus database with same CATH superfamily
3GZLA 1E6JP 2EHTA 3CD6P 2KG6A 5F2NA 4H2WC 1Q7YQ 4U0BA 3CCLP 1RO0A 2VLQA 2N50A 2M8PA 2L4BA 2KG9A 1RNIA 2GZJA 2DNWA 1AUMA 2K0DX 2AF8A 3LRYA 2K94A 2OARA 2FACA 4M0IA 3M1MA 1HY8A 4PXHB 4XFZA 4CA3A 2AVAA 1K73Q 2N6ZA 2DGYA 2LIUA 2MR8A 3CCUP 1X3OA 2CNRA 1YHQP 4COPA 2NO8A 4BPGA 2FHSC 3WBHA 2CWOA 3B4QA 2GDWA 1YIJP 2XXMA 4U0AA 1T8KA 2M5RA 4XFXA 2JYGA 3DS0A 2KWLA 3HYBA 3RG6C 1EIAA 4PWVB 3NTEA 5JPAA 4DG9A 1BXIA 2LTEA 2K92A 1VHNA 1IMPA 2KOOA 1VQPP 2CGQA 4GR2A 4XROA 3CC2P 4R0MA 5HGOA 2LF4A 3CMAP 3GKLC 2MY5A 2L22A 3CMEP 2MF4A 3Q20A 4IZ6A 3LMOA 1VQ4P 2MVVA 2JYLA 3I56P 2EG5A 3G0VA 5HV8A 5KP6B 2X2BA 1A8OA 2FVEA 5CZDB 3G21A 5BS2A 1MZ8A 2K2QA 2EFJA 2KOSA 2KGCA 2MD9A 3RG2A 3CCMP 2N5HA 2QEXP 1IMQA 1YJNP 2K5XA 2FQ1A 4H2XC 1VQOP 1NJIQ 3H4EA 2Z46A 1YITP 7CEIA 2BUOA 1YJ9P 3EJDA 1VQNP 2KODA 2FQ2A 2JO0A 2GDXA 2LL8A 2XV6A 2MVUA 5BS1A 3CE7A 2LMLA 3G1IA 2M8NA 1KLPA 3EJBA 1DNYA 1BAJA 3DS3A 2VLPA 3DS2A 1FR2A 2PEMA 3U43A 4WYMA 2LKIA 2JGPA 5I4TG 3E2DA 1EMVA 5F2KA 1DV5A 4BPFA 2GZFA 3G4SP 1GXHA 1Q82Q 2PNGA 1M90Q 3G1GA 2LIWA 3CCJP 4GR6A 2FAEA 3H0DA 2E1MA 1RO2A 3CCSP 2QNWA 3DPHA 3CC7P 2KGAA 3G71P 2ONTA 2GZIA 1K30A 3P05A 2KOQA 3G28A 3OW2O 3DTJA 5KP7B 1ZNVA 2KR5A 3G6EP 1HQBA 1VQKP 3CCVP 5HGNA 1KQSO 1S72P 1KD1Q 2KGEA 4U0DA 1ZMBA 2Z44A 2KORA 4U0CA 5HGLA 1EOQA 4UHPB 2KGDA 1UNKA 2XZ0D 2CG5B 3CXCO 1D1DA 1A43A 3GJNA 2JQ4A 1L0HA 2FQ0A 1YI2P 2N5IA 2L6EA 3HZQA 3I55P 2KOPA 1UJZA 2EIAA 2M8LA 1VQ5P 2K0XA 1VQ6P 1M6EX 1IUQA 2ROQA 1CEIA 2FADA 3NY7B 4BPHA 4IPYA 2K0YA 5F2OA 2AFEA 1K8AQ 3GZMA 1QRJA 5EJDA 2GDYA 1QVGO 1N8RQ 1W2BO 2PEIA 2N6YA 1Q81Q 1GXGA 2Z45A 1GPJA 2BHVA 2PEKA 1VQ7P 1K9MQ 2PY8A 2K93A 3DS1A 2JB0A 4H2YC 1VQ8P 1VQMP 2EHSA 2XT1A 2JU2A 4F37A 1AYIA 2OTJP 3CC4P 2LPKA 2KW2A 2MR7A 5HVCA 3VRLC 2QA4P 5EW5E 1YJWP 2JAZA 2JU1A 2AFDA 2GZGA 4HKGA 1NQ4A 2FVAA 1KC8Q 2ERHA 3B5IA 3G29A 4QKOA 2VLNA 2PEQA 4XFYA 3DS4A 3CPWO 3CCRP 1F80D 2CQ8A 4XRQA 2PEJA 1Q86Q 5KP8B 3EJEA 1OR5A 3CCQP 2L0QA 2VLOA 1QVFO 4NEOA 1AF8A 1M1KQ 4U0EA 1L0IA 4PH0A 2OTLP 2N98A 3MGEA 3H47A 5DCKA 2PEOA 2VSQA 3G26A 4PH1A 2PENA 1VQLP 4U0FA 2LOLA 1VKUA 4MRTC 5HGMA 1ACPA 3CCEP 2WPTA 1M74A 2XZ1C 1Z6MA 1M6NA 3DS5A 1JJ2O 2GYKA 2GZEA 2L9FA 4COCA 4QNBA 2P9XA 1E0HA 1VQ9P 2KG8A 2JBGA 2FVFA
chains in the Genus database with same CATH topology
3GZLA 2KOQA 5KP7B 2EHTA 2KG6A 2K93A 2KR5A 4H2YC 2K2QA 1HQBA 4H2WC 2EHSA 2KOSA 2JU2A 2KGCA 2MD9A 3RG2A 2N5HA 2LPKA 2KW2A 2MR7A 2N50A 5HVCA 2KGEA 2FQ1A 2L4BA 4H2XC 2KG9A 2KORA 2JU1A 2AFDA 2DNWA 4HKGA 2AF8A 1NQ4A 2K94A 2FVAA 2FACA 1HY8A 3EJDA 4PXHB 4CA3A 2AVAA 2KGDA 2N6ZA 2LIUA 2MR8A 1F80D 2CQ8A 1X3OA 2FQ2A 2CNRA 4BPGA 2LL8A 2GDXA 2FHSC 2XZ0D 3EJEA 2MVUA 5KP8B 2CG5B 1OR5A 2GDWA 2L0QA 3CE7A 4NEOA 2LMLA 1AF8A 1L0IA 1T8KA 1KLPA 2M5RA 2JQ4A 3EJBA 1DNYA 1L0HA 2FQ0A 2KWLA 4PWVB 2N5IA 2N98A 4DG9A 2VSQA 2KOPA 2LTEA 2K92A 2K0XA 2JGPA 2LKIA 2ROQA 2KOOA 2FADA 1DV5A 2CGQA 3NY7B 4BPHA 2K0YA 2LOLA 4BPFA 4R0MA 2AFEA 1VKUA 4MRTC 1ACPA 2MY5A 2PNGA 3GZMA 2L22A 5EJDA 2GDYA 2XZ1C 2LIWA 2MF4A 2N6YA 4IZ6A 3LMOA 2FAEA 2MVVA 2L9FA 2QNWA 5HV8A 5KP6B 2X2BA 2KG8A 2KGAA 2FVEA 5CZDB 2FVFA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3GZL A;  2KOQ A;  5KP7 B;  2EHT A;  2KG6 A;  2K93 A;  2KR5 A;  4H2Y C;  2K2Q A;  1HQB A;  4H2W C;  2EHS A;  2KOS A;  2JU2 A;  2KGC A;  2MD9 A;  3RG2 A;  2N5H A;  2LPK A;  2KW2 A;  2MR7 A;  2N50 A;  5HVC A;  2KGE A;  2FQ1 A;  2L4B A;  4H2X C;  2KG9 A;  2KOR A;  2JU1 A;  2AFD A;  2DNW A;  4HKG A;  2AF8 A;  1NQ4 A;  2K94 A;  2FVA A;  2FAC A;  1HY8 A;  3EJD A;  4PXH B;  4CA3 A;  2AVA A;  2KGD A;  2N6Z A;  2LIU A;  2MR8 A;  1F80 D;  2CQ8 A;  1X3O A;  2FQ2 A;  2CNR A;  4BPG A;  2LL8 A;  2GDX A;  2FHS C;  2XZ0 D;  3EJE A;  2MVU A;  5KP8 B;  2CG5 B;  1OR5 A;  2GDW A;  2L0Q A;  3CE7 A;  4NEO A;  2LML A;  1AF8 A;  1L0I A;  1T8K A;  1KLP A;  2M5R A;  2JQ4 A;  3EJB A;  1DNY A;  1L0H A;  2FQ0 A;  2KWL A;  4PWV B;  2N5I A;  2N98 A;  4DG9 A;  2VSQ A;  2KOP A;  2LTE A;  2K92 A;  2K0X A;  2JGP A;  2LKI A;  2ROQ A;  2KOO A;  2FAD A;  1DV5 A;  2CGQ A;  3NY7 B;  4BPH A;  2K0Y A;  2LOL A;  4BPF A;  4R0M A;  2AFE A;  1VKU A;  4MRT C;  1ACP A;  2MY5 A;  2PNG A;  3GZM A;  2L22 A;  5EJD A;  2GDY A;  2XZ1 C;  2LIW A;  2MF4 A;  2N6Y A;  4IZ6 A;  3LMO A;  2FAE A;  2MVV A;  2L9F A;  2QNW A;  5HV8 A;  5KP6 B;  2X2B A;  2KG8 A;  2KGA A;  2FVE A;  5CZD B;  2FVF A; 
#chains in the Genus database with same CATH topology
 3GZL A;  1E6J P;  2EHT A;  3CD6 P;  2KG6 A;  5F2N A;  4H2W C;  1Q7Y Q;  4U0B A;  3CCL P;  1RO0 A;  2VLQ A;  2N50 A;  2M8P A;  2L4B A;  2KG9 A;  1RNI A;  2GZJ A;  2DNW A;  1AUM A;  2K0D X;  2AF8 A;  3LRY A;  2K94 A;  2OAR A;  2FAC A;  4M0I A;  3M1M A;  1HY8 A;  4PXH B;  4XFZ A;  4CA3 A;  2AVA A;  1K73 Q;  2N6Z A;  2DGY A;  2LIU A;  2MR8 A;  3CCU P;  1X3O A;  2CNR A;  1YHQ P;  4COP A;  2NO8 A;  4BPG A;  2FHS C;  3WBH A;  2CWO A;  3B4Q A;  2GDW A;  1YIJ P;  2XXM A;  4U0A A;  1T8K A;  2M5R A;  4XFX A;  2JYG A;  3DS0 A;  2KWL A;  3HYB A;  3RG6 C;  1EIA A;  4PWV B;  3NTE A;  5JPA A;  4DG9 A;  1BXI A;  2LTE A;  2K92 A;  1VHN A;  1IMP A;  2KOO A;  1VQP P;  2CGQ A;  4GR2 A;  4XRO A;  3CC2 P;  4R0M A;  5HGO A;  2LF4 A;  3CMA P;  3GKL C;  2MY5 A;  2L22 A;  3CME P;  2MF4 A;  3Q20 A;  4IZ6 A;  3LMO A;  1VQ4 P;  2MVV A;  2JYL A;  3I56 P;  2EG5 A;  3G0V A;  5HV8 A;  5KP6 B;  2X2B A;  1A8O A;  2FVE A;  5CZD B;  3G21 A;  5BS2 A;  1MZ8 A;  2K2Q A;  2EFJ A;  2KOS A;  2KGC A;  2MD9 A;  3RG2 A;  3CCM P;  2N5H A;  2QEX P;  1IMQ A;  1YJN P;  2K5X A;  2FQ1 A;  4H2X C;  1VQO P;  1NJI Q;  3H4E A;  2Z46 A;  1YIT P;  7CEI A;  2BUO A;  1YJ9 P;  3EJD A;  1VQN P;  2KOD A;  2FQ2 A;  2JO0 A;  2GDX A;  2LL8 A;  2XV6 A;  2MVU A;  5BS1 A;  3CE7 A;  2LML A;  3G1I A;  2M8N A;  1KLP A;  3EJB A;  1DNY A;  1BAJ A;  3DS3 A;  2VLP A;  3DS2 A;  1FR2 A;  2PEM A;  3U43 A;  4WYM A;  2LKI A;  2JGP A;  5I4T G;  3E2D A;  1EMV A;  5F2K A;  1DV5 A;  4BPF A;  2GZF A;  3G4S P;  1GXH A;  1Q82 Q;  2PNG A;  1M90 Q;  3G1G A;  2LIW A;  3CCJ P;  4GR6 A;  2FAE A;  3H0D A;  2E1M A;  1RO2 A;  3CCS P;  2QNW A;  3DPH A;  3CC7 P;  2KGA A;  3G71 P;  2ONT A;  2GZI A;  1K30 A;  3P05 A;  2KOQ A;  3G28 A;  3OW2 O;  3DTJ A;  5KP7 B;  1ZNV A;  2KR5 A;  3G6E P;  1HQB A;  1VQK P;  3CCV P;  5HGN A;  1KQS O;  1S72 P;  1KD1 Q;  2KGE A;  4U0D A;  1ZMB A;  2Z44 A;  2KOR A;  4U0C A;  5HGL A;  1EOQ A;  4UHP B;  2KGD A;  1UNK A;  2XZ0 D;  2CG5 B;  3CXC O;  1D1D A;  1A43 A;  3GJN A;  2JQ4 A;  1L0H A;  2FQ0 A;  1YI2 P;  2N5I A;  2L6E A;  3HZQ A;  3I55 P;  2KOP A;  1UJZ A;  2EIA A;  2M8L A;  1VQ5 P;  2K0X A;  1VQ6 P;  1M6E X;  1IUQ A;  2ROQ A;  1CEI A;  2FAD A;  3NY7 B;  4BPH A;  4IPY A;  2K0Y A;  5F2O A;  2AFE A;  1K8A Q;  3GZM A;  1QRJ A;  5EJD A;  2GDY A;  1QVG O;  1N8R Q;  1W2B O;  2PEI A;  2N6Y A;  1Q81 Q;  1GXG A;  2Z45 A;  1GPJ A;  2BHV A;  2PEK A;  1VQ7 P;  1K9M Q;  2PY8 A;  2K93 A;  3DS1 A;  2JB0 A;  4H2Y C;  1VQ8 P;  1VQM P;  2EHS A;  2XT1 A;  2JU2 A;  4F37 A;  1AYI A;  2OTJ P;  3CC4 P;  2LPK A;  2KW2 A;  2MR7 A;  5HVC A;  3VRL C;  2QA4 P;  5EW5 E;  1YJW P;  2JAZ A;  2JU1 A;  2AFD A;  2GZG A;  4HKG A;  1NQ4 A;  2FVA A;  1KC8 Q;  2ERH A;  3B5I A;  3G29 A;  4QKO A;  2VLN A;  2PEQ A;  4XFY A;  3DS4 A;  3CPW O;  3CCR P;  1F80 D;  2CQ8 A;  4XRQ A;  2PEJ A;  1Q86 Q;  5KP8 B;  3EJE A;  1OR5 A;  3CCQ P;  2L0Q A;  2VLO A;  1QVF O;  4NEO A;  1AF8 A;  1M1K Q;  4U0E A;  1L0I A;  4PH0 A;  2OTL P;  2N98 A;  3MGE A;  3H47 A;  5DCK A;  2PEO A;  2VSQ A;  3G26 A;  4PH1 A;  2PEN A;  1VQL P;  4U0F A;  2LOL A;  1VKU A;  4MRT C;  5HGM A;  1ACP A;  3CCE P;  2WPT A;  1M74 A;  2XZ1 C;  1Z6M A;  1M6N A;  3DS5 A;  1JJ2 O;  2GYK A;  2GZE A;  2L9F A;  4COC A;  4QNB A;  2P9X A;  1E0H A;  1VQ9 P;  2KG8 A;  2JBG A;  2FVF A; 
#chains in the Genus database with same CATH homology
 3GZL A;  2KOQ A;  5KP7 B;  2EHT A;  2KG6 A;  2K93 A;  2KR5 A;  4H2Y C;  2K2Q A;  1HQB A;  4H2W C;  2EHS A;  2KOS A;  2JU2 A;  2KGC A;  2MD9 A;  3RG2 A;  2N5H A;  2LPK A;  2KW2 A;  2MR7 A;  2N50 A;  5HVC A;  2KGE A;  2FQ1 A;  2L4B A;  4H2X C;  2KG9 A;  2KOR A;  2JU1 A;  2AFD A;  2DNW A;  4HKG A;  2AF8 A;  1NQ4 A;  2K94 A;  2FVA A;  2FAC A;  1HY8 A;  3EJD A;  4PXH B;  4CA3 A;  2AVA A;  2KGD A;  2N6Z A;  2LIU A;  2MR8 A;  1F80 D;  2CQ8 A;  1X3O A;  2FQ2 A;  2CNR A;  4BPG A;  2LL8 A;  2GDX A;  2FHS C;  2XZ0 D;  3EJE A;  2MVU A;  5KP8 B;  2CG5 B;  1OR5 A;  2GDW A;  2L0Q A;  3CE7 A;  4NEO A;  2LML A;  1AF8 A;  1L0I A;  1T8K A;  1KLP A;  2M5R A;  2JQ4 A;  3EJB A;  1DNY A;  1L0H A;  2FQ0 A;  2KWL A;  4PWV B;  2N5I A;  2N98 A;  4DG9 A;  2VSQ A;  2KOP A;  2LTE A;  2K92 A;  2K0X A;  2JGP A;  2LKI A;  2ROQ A;  2KOO A;  2FAD A;  1DV5 A;  2CGQ A;  3NY7 B;  4BPH A;  2K0Y A;  2LOL A;  4BPF A;  4R0M A;  2AFE A;  1VKU A;  4MRT C;  1ACP A;  2MY5 A;  2PNG A;  3GZM A;  2L22 A;  5EJD A;  2GDY A;  2XZ1 C;  2LIW A;  2MF4 A;  2N6Y A;  4IZ6 A;  3LMO A;  2FAE A;  2MVV A;  2L9F A;  2QNW A;  5HV8 A;  5KP6 B;  2X2B A;  2KG8 A;  2KGA A;  2FVE A;  5CZD B;  2FVF A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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