2KG9A

Nmr solution structures of butyryl-acp (a non-polar, non pathway intermediate) from the actinorhodin polyketide synthase in streptomyces coelicolor
Total Genus 23
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
23
sequence length
86
structure length
86
Chain Sequence
MATLLTTDDLRRALVESAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Biosynthetic protein
molecule keywords Actinorhodin polyketide synthase acyl carrier protein
publication title Probing the Interactions of Early Polyketide Intermediates with the Actinorhodin ACP from S. coelicolor A3(2).
pubmed doi rcsb
source organism Streptomyces coelicolor
total genus 23
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 2009-03-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2kg9A00
2KOQA 1DNYA 1L0HA 2MR8A 4BPHA 3LMOA 2KWLA 2CGQA 2EHSA 2FVFA 2KG6A 5HV8A 2L9FA 2KGCA 4H2XC 2LL8A 2FACA 2FAEA 2MD9A 2GDYA 5KP8B 1F80D 4PXHB 2K0YA 4IZ6A 4H2WC 2K0XA 5CZDB 4PWVB 1KLPA 2AFEA 2XZ1C 1DV5A 2JU2A 2KORA 2L0QA 2MVUA 2N50A 2KW2A 2LMLA 2FVAA 2KG8A 2K2QA 5KP7B 2CNRA 2JU1A 2N5IA 1HY8A 2ROQA 2VSQA 2GDXA 4NEOA 1VKUA 4BPGA 2GDWA 2FVEA 2KOOA 3NY7B 2AFDA 1T8KA 2KOPA 5EJDA 1L0IA 3EJEA 1NQ4A 2LKIA 2N6YA 2FQ1A 2M5RA 2MY5A 2KOSA 2FQ2A 2QNWA 2FADA 2KR5A 4HKGA 2FHSC 2LTEA 1AF8A 2DNWA 1OR5A 2K93A 2XZ0D 1ACPA 3GZLA 2AVAA 2FQ0A 2LOLA 2JQ4A 4R0MA 4MRTC 3RG2A 4BPFA 2K92A 4H2YC 2CG5B 2LIWA 1HQBA 4DG9A 2N98A 2KGAA 2L4BA 5HVCA 2MVVA 2KGDA 2AF8A 3EJBA 2X2BA 2MF4A 2N6ZA 3EJDA 3GZMA 2CQ8A 2EHTA 1X3OA 2K94A 2KG9A 2KGEA 2PNGA 2N5HA 2LPKA 2LIUA 4CA3A 2L22A 3CE7A 2MR7A 2JGPA 5KP6B
chains in the Genus database with same CATH superfamily
2KOQA 1RO0A 2EHSA 2ONTA 3WBHA 2KG6A 5HV8A 5HGOA 4H2XC 3G0VA 2GDYA 4PXHB 2M8PA 3CC4P 2K0XA 4PWVB 3DS1A 2VLOA 5JPAA 2AFEA 1DV5A 2Z45A 2QA4P 1E0HA 2PEIA 2MVUA 2N50A 2LMLA 2NO8A 3CC2P 1A8OA 3M1MA 5KP7B 1VQ9P 2CNRA 3G21A 1Z6MA 2PEMA 1Q7YQ 2GDXA 1QVFO 2FVEA 2VLQA 3NY7B 1D1DA 1VQLP 1K73Q 1AYIA 1K8AQ 2JAZA 2M5RA 1VQNP 2ERHA 2KOSA 3OW2O 1AF8A 3DS5A 3GZLA 3CD6P 2FQ0A 3E2DA 1CEIA 4H2YC 1M6NA 3G29A 3CC7P 1VQ8P 2N98A 2KGAA 1BXIA 2XXMA 5HVCA 2MVVA 3GJNA 2AF8A 4U0EA 2M8NA 1KQSO 1IUQA 3VRLC 3G4SP 3DS0A 2BUOA 2LPKA 2LIUA 4CA3A 5KP6B 2MR8A 3LMOA 2LF4A 5BS2A 5F2OA 3DS4A 1KC8Q 4XFXA 5CZDB 4U0AA 2KW2A 1NJIQ 2FVAA 1HY8A 2ROQA 1VQOP 4PH1A 2L6EA 1W2BO 4BPGA 2GDWA 2GZIA 1QRJA 1EMVA 4XRQA 1KD1Q 3CCEP 1YJNP 5F2NA 1JJ2O 2MY5A 1MZ8A 4M0IA 2KR5A 1YJ9P 4U0BA 5I4TG 2XZ0D 1Q86Q 4R0MA 2OARA 2Z46A 3RG2A 2JYGA 1YIJP 1EIAA 1VQ6P 2GYKA 1RO2A 1E6JP 1VQPP 1YI2P 2L4BA 3CCUP 2GZFA 2K5XA 3CMEP 3HYBA 2MF4A 2GZEA 3EJDA 2EHTA 1X3OA 1GXGA 2KG9A 2XV6A 2N5HA 5HGLA 1ZMBA 2EIAA 2CGQA 3H4EA 3RG6C 3H0DA 3DPHA 2FACA 2FAEA 4QKOA 2K0YA 4IZ6A 4QNBA 1VQ4P 3B5IA 2PEJA 1UJZA 1RNIA 2JU2A 1VQMP 2L0QA 1UNKA 3CCQP 2KG8A 2K2QA 2JU1A 2N5IA 2VLPA 3CCRP 2PENA 4COCA 2VSQA 4NEOA 2JB0A 1Q82Q 3G71P 2KOOA 1VQ5P 1T8KA 3CXCO 1M90Q 2KOPA 5DCKA 4COPA 2K0DX 2KODA 3DS2A 1IMQA 3EJEA 3CMAP 3GKLC 5F2KA 1NQ4A 2LKIA 3G6EP 2EFJA 1YHQP 2FHSC 2GZJA 3P05A 4XROA 3G1GA 1VHNA 2DNWA 1OR5A 2K93A 2WPTA 2AVAA 2VLNA 3CCJP 2LOLA 4IPYA 1VQ7P 4MRTC 1BAJA 2LIWA 1HQBA 1VQKP 3HZQA 3CCVP 1QVGO 2XT1A 2BHVA 3H47A 7CEIA 2CQ8A 3G28A 4XFYA 1ZNVA 4PH0A 3CE7A 2JGPA 1N8RQ 1DNYA 1L0HA 2OTJP 4BPHA 4UHPB 2KWLA 4U0FA 2M8LA 2FVFA 2L9FA 1AUMA 2KGCA 2LL8A 2MD9A 5KP8B 5BS1A 1F80D 5HGMA 3CCMP 4H2WC 1GPJA 1KLPA 2JYLA 2XZ1C 1K9MQ 2KORA 1M1KQ 2OTLP 3I56P 1GXHA 3I55P 1K30A 3Q20A 1VKUA 3DS3A 2AFDA 2GZGA 3DTJA 5EJDA 1EOQA 2PEOA 1L0IA 1FR2A 3U43A 3G1IA 2N6YA 2FQ1A 4GR2A 2JBGA 3CPWO 3CCLP 2FQ2A 2QNWA 2FADA 2QEXP 4HKGA 2Z44A 2LTEA 5HGNA 2EG5A 1YJWP 2DGYA 4WYMA 1ACPA 3NTEA 4F37A 1IMPA 2JQ4A 1M6EX 3CCSP 2JO0A 4XFZA 4BPFA 2K92A 1A43A 2CG5B 4U0DA 4DG9A 5EW5E 3B4QA 1S72P 2PY8A 2KGDA 4GR6A 2PEKA 1M74A 3EJBA 1Q81Q 2X2BA 3MGEA 2N6ZA 2E1MA 3GZMA 4U0CA 2K94A 2CWOA 1YITP 2PNGA 2KGEA 2P9XA 3G26A 2PEQA 2L22A 3LRYA 2MR7A
chains in the Genus database with same CATH topology
2KOQA 1DNYA 1L0HA 2MR8A 4BPHA 3LMOA 2KWLA 2CGQA 2EHSA 2FVFA 2KG6A 5HV8A 2L9FA 2KGCA 4H2XC 2LL8A 2FACA 2FAEA 2MD9A 2GDYA 5KP8B 1F80D 4PXHB 2K0YA 4IZ6A 4H2WC 2K0XA 5CZDB 4PWVB 1KLPA 2AFEA 2XZ1C 1DV5A 2JU2A 2KORA 2L0QA 2MVUA 2N50A 2KW2A 2LMLA 2FVAA 2KG8A 2K2QA 5KP7B 2CNRA 2JU1A 2N5IA 1HY8A 2ROQA 2VSQA 2GDXA 4NEOA 1VKUA 4BPGA 2GDWA 2FVEA 2KOOA 3NY7B 2AFDA 1T8KA 2KOPA 5EJDA 1L0IA 3EJEA 1NQ4A 2LKIA 2N6YA 2FQ1A 2M5RA 2MY5A 2KOSA 2FQ2A 2QNWA 2FADA 2KR5A 4HKGA 2FHSC 2LTEA 1AF8A 2DNWA 1OR5A 2K93A 2XZ0D 1ACPA 3GZLA 2AVAA 2FQ0A 2LOLA 2JQ4A 4R0MA 4MRTC 3RG2A 4BPFA 2K92A 4H2YC 2CG5B 2LIWA 1HQBA 4DG9A 2N98A 2KGAA 2L4BA 5HVCA 2MVVA 2KGDA 2AF8A 3EJBA 2X2BA 2MF4A 2N6ZA 3EJDA 3GZMA 2CQ8A 2EHTA 1X3OA 2K94A 2KG9A 2KGEA 2PNGA 2N5HA 2LPKA 2LIUA 4CA3A 2L22A 3CE7A 2MR7A 2JGPA 5KP6B
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2KOQ A;  1DNY A;  1L0H A;  2MR8 A;  4BPH A;  3LMO A;  2KWL A;  2CGQ A;  2EHS A;  2FVF A;  2KG6 A;  5HV8 A;  2L9F A;  2KGC A;  4H2X C;  2LL8 A;  2FAC A;  2FAE A;  2MD9 A;  2GDY A;  5KP8 B;  1F80 D;  4PXH B;  2K0Y A;  4IZ6 A;  4H2W C;  2K0X A;  5CZD B;  4PWV B;  1KLP A;  2AFE A;  2XZ1 C;  1DV5 A;  2JU2 A;  2KOR A;  2L0Q A;  2MVU A;  2N50 A;  2KW2 A;  2LML A;  2FVA A;  2KG8 A;  2K2Q A;  5KP7 B;  2CNR A;  2JU1 A;  2N5I A;  1HY8 A;  2ROQ A;  2VSQ A;  2GDX A;  4NEO A;  1VKU A;  4BPG A;  2GDW A;  2FVE A;  2KOO A;  3NY7 B;  2AFD A;  1T8K A;  2KOP A;  5EJD A;  1L0I A;  3EJE A;  1NQ4 A;  2LKI A;  2N6Y A;  2FQ1 A;  2M5R A;  2MY5 A;  2KOS A;  2FQ2 A;  2QNW A;  2FAD A;  2KR5 A;  4HKG A;  2FHS C;  2LTE A;  1AF8 A;  2DNW A;  1OR5 A;  2K93 A;  2XZ0 D;  1ACP A;  3GZL A;  2AVA A;  2FQ0 A;  2LOL A;  2JQ4 A;  4R0M A;  4MRT C;  3RG2 A;  4BPF A;  2K92 A;  4H2Y C;  2CG5 B;  2LIW A;  1HQB A;  4DG9 A;  2N98 A;  2KGA A;  2L4B A;  5HVC A;  2MVV A;  2KGD A;  2AF8 A;  3EJB A;  2X2B A;  2MF4 A;  2N6Z A;  3EJD A;  3GZM A;  2CQ8 A;  2EHT A;  1X3O A;  2K94 A;  2KG9 A;  2KGE A;  2PNG A;  2N5H A;  2LPK A;  2LIU A;  4CA3 A;  2L22 A;  3CE7 A;  2MR7 A;  2JGP A;  5KP6 B; 
#chains in the Genus database with same CATH topology
 2KOQ A;  1RO0 A;  2EHS A;  2ONT A;  3WBH A;  2KG6 A;  5HV8 A;  5HGO A;  4H2X C;  3G0V A;  2GDY A;  4PXH B;  2M8P A;  3CC4 P;  2K0X A;  4PWV B;  3DS1 A;  2VLO A;  5JPA A;  2AFE A;  1DV5 A;  2Z45 A;  2QA4 P;  1E0H A;  2PEI A;  2MVU A;  2N50 A;  2LML A;  2NO8 A;  3CC2 P;  1A8O A;  3M1M A;  5KP7 B;  1VQ9 P;  2CNR A;  3G21 A;  1Z6M A;  2PEM A;  1Q7Y Q;  2GDX A;  1QVF O;  2FVE A;  2VLQ A;  3NY7 B;  1D1D A;  1VQL P;  1K73 Q;  1AYI A;  1K8A Q;  2JAZ A;  2M5R A;  1VQN P;  2ERH A;  2KOS A;  3OW2 O;  1AF8 A;  3DS5 A;  3GZL A;  3CD6 P;  2FQ0 A;  3E2D A;  1CEI A;  4H2Y C;  1M6N A;  3G29 A;  3CC7 P;  1VQ8 P;  2N98 A;  2KGA A;  1BXI A;  2XXM A;  5HVC A;  2MVV A;  3GJN A;  2AF8 A;  4U0E A;  2M8N A;  1KQS O;  1IUQ A;  3VRL C;  3G4S P;  3DS0 A;  2BUO A;  2LPK A;  2LIU A;  4CA3 A;  5KP6 B;  2MR8 A;  3LMO A;  2LF4 A;  5BS2 A;  5F2O A;  3DS4 A;  1KC8 Q;  4XFX A;  5CZD B;  4U0A A;  2KW2 A;  1NJI Q;  2FVA A;  1HY8 A;  2ROQ A;  1VQO P;  4PH1 A;  2L6E A;  1W2B O;  4BPG A;  2GDW A;  2GZI A;  1QRJ A;  1EMV A;  4XRQ A;  1KD1 Q;  3CCE P;  1YJN P;  5F2N A;  1JJ2 O;  2MY5 A;  1MZ8 A;  4M0I A;  2KR5 A;  1YJ9 P;  4U0B A;  5I4T G;  2XZ0 D;  1Q86 Q;  4R0M A;  2OAR A;  2Z46 A;  3RG2 A;  2JYG A;  1YIJ P;  1EIA A;  1VQ6 P;  2GYK A;  1RO2 A;  1E6J P;  1VQP P;  1YI2 P;  2L4B A;  3CCU P;  2GZF A;  2K5X A;  3CME P;  3HYB A;  2MF4 A;  2GZE A;  3EJD A;  2EHT A;  1X3O A;  1GXG A;  2KG9 A;  2XV6 A;  2N5H A;  5HGL A;  1ZMB A;  2EIA A;  2CGQ A;  3H4E A;  3RG6 C;  3H0D A;  3DPH A;  2FAC A;  2FAE A;  4QKO A;  2K0Y A;  4IZ6 A;  4QNB A;  1VQ4 P;  3B5I A;  2PEJ A;  1UJZ A;  1RNI A;  2JU2 A;  1VQM P;  2L0Q A;  1UNK A;  3CCQ P;  2KG8 A;  2K2Q A;  2JU1 A;  2N5I A;  2VLP A;  3CCR P;  2PEN A;  4COC A;  2VSQ A;  4NEO A;  2JB0 A;  1Q82 Q;  3G71 P;  2KOO A;  1VQ5 P;  1T8K A;  3CXC O;  1M90 Q;  2KOP A;  5DCK A;  4COP A;  2K0D X;  2KOD A;  3DS2 A;  1IMQ A;  3EJE A;  3CMA P;  3GKL C;  5F2K A;  1NQ4 A;  2LKI A;  3G6E P;  2EFJ A;  1YHQ P;  2FHS C;  2GZJ A;  3P05 A;  4XRO A;  3G1G A;  1VHN A;  2DNW A;  1OR5 A;  2K93 A;  2WPT A;  2AVA A;  2VLN A;  3CCJ P;  2LOL A;  4IPY A;  1VQ7 P;  4MRT C;  1BAJ A;  2LIW A;  1HQB A;  1VQK P;  3HZQ A;  3CCV P;  1QVG O;  2XT1 A;  2BHV A;  3H47 A;  7CEI A;  2CQ8 A;  3G28 A;  4XFY A;  1ZNV A;  4PH0 A;  3CE7 A;  2JGP A;  1N8R Q;  1DNY A;  1L0H A;  2OTJ P;  4BPH A;  4UHP B;  2KWL A;  4U0F A;  2M8L A;  2FVF A;  2L9F A;  1AUM A;  2KGC A;  2LL8 A;  2MD9 A;  5KP8 B;  5BS1 A;  1F80 D;  5HGM A;  3CCM P;  4H2W C;  1GPJ A;  1KLP A;  2JYL A;  2XZ1 C;  1K9M Q;  2KOR A;  1M1K Q;  2OTL P;  3I56 P;  1GXH A;  3I55 P;  1K30 A;  3Q20 A;  1VKU A;  3DS3 A;  2AFD A;  2GZG A;  3DTJ A;  5EJD A;  1EOQ A;  2PEO A;  1L0I A;  1FR2 A;  3U43 A;  3G1I A;  2N6Y A;  2FQ1 A;  4GR2 A;  2JBG A;  3CPW O;  3CCL P;  2FQ2 A;  2QNW A;  2FAD A;  2QEX P;  4HKG A;  2Z44 A;  2LTE A;  5HGN A;  2EG5 A;  1YJW P;  2DGY A;  4WYM A;  1ACP A;  3NTE A;  4F37 A;  1IMP A;  2JQ4 A;  1M6E X;  3CCS P;  2JO0 A;  4XFZ A;  4BPF A;  2K92 A;  1A43 A;  2CG5 B;  4U0D A;  4DG9 A;  5EW5 E;  3B4Q A;  1S72 P;  2PY8 A;  2KGD A;  4GR6 A;  2PEK A;  1M74 A;  3EJB A;  1Q81 Q;  2X2B A;  3MGE A;  2N6Z A;  2E1M A;  3GZM A;  4U0C A;  2K94 A;  2CWO A;  1YIT P;  2PNG A;  2KGE A;  2P9X A;  3G26 A;  2PEQ A;  2L22 A;  3LRY A;  2MR7 A; 
#chains in the Genus database with same CATH homology
 2KOQ A;  1DNY A;  1L0H A;  2MR8 A;  4BPH A;  3LMO A;  2KWL A;  2CGQ A;  2EHS A;  2FVF A;  2KG6 A;  5HV8 A;  2L9F A;  2KGC A;  4H2X C;  2LL8 A;  2FAC A;  2FAE A;  2MD9 A;  2GDY A;  5KP8 B;  1F80 D;  4PXH B;  2K0Y A;  4IZ6 A;  4H2W C;  2K0X A;  5CZD B;  4PWV B;  1KLP A;  2AFE A;  2XZ1 C;  1DV5 A;  2JU2 A;  2KOR A;  2L0Q A;  2MVU A;  2N50 A;  2KW2 A;  2LML A;  2FVA A;  2KG8 A;  2K2Q A;  5KP7 B;  2CNR A;  2JU1 A;  2N5I A;  1HY8 A;  2ROQ A;  2VSQ A;  2GDX A;  4NEO A;  1VKU A;  4BPG A;  2GDW A;  2FVE A;  2KOO A;  3NY7 B;  2AFD A;  1T8K A;  2KOP A;  5EJD A;  1L0I A;  3EJE A;  1NQ4 A;  2LKI A;  2N6Y A;  2FQ1 A;  2M5R A;  2MY5 A;  2KOS A;  2FQ2 A;  2QNW A;  2FAD A;  2KR5 A;  4HKG A;  2FHS C;  2LTE A;  1AF8 A;  2DNW A;  1OR5 A;  2K93 A;  2XZ0 D;  1ACP A;  3GZL A;  2AVA A;  2FQ0 A;  2LOL A;  2JQ4 A;  4R0M A;  4MRT C;  3RG2 A;  4BPF A;  2K92 A;  4H2Y C;  2CG5 B;  2LIW A;  1HQB A;  4DG9 A;  2N98 A;  2KGA A;  2L4B A;  5HVC A;  2MVV A;  2KGD A;  2AF8 A;  3EJB A;  2X2B A;  2MF4 A;  2N6Z A;  3EJD A;  3GZM A;  2CQ8 A;  2EHT A;  1X3O A;  2K94 A;  2KG9 A;  2KGE A;  2PNG A;  2N5H A;  2LPK A;  2LIU A;  4CA3 A;  2L22 A;  3CE7 A;  2MR7 A;  2JGP A;  5KP6 B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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