2KG9A

Nmr solution structures of butyryl-acp (a non-polar, non pathway intermediate) from the actinorhodin polyketide synthase in streptomyces coelicolor
Total Genus 23
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
23
sequence length
86
structure length
86
Chain Sequence
MATLLTTDDLRRALVESAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Biosynthetic protein
source organism Streptomyces coelicolor
publication title Probing the Interactions of Early Polyketide Intermediates with the Actinorhodin ACP from S. coelicolor A3(2).
pubmed doi rcsb
molecule keywords Actinorhodin polyketide synthase acyl carrier protein
total genus 23
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 2009-03-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2kg9A00
2N98A 4CA3A 4H2WC 2LKIA 1L0HA 2KGCA 2KGDA 2FVAA 2K93A 1T8KA 2CQ8A 2LL8A 2K2QA 2AFEA 2KOSA 2KGEA 2N5HA 4H2YC 2M5RA 5KP7B 2AF8A 5CZDB 1HY8A 4R0MA 3NY7B 2KOQA 4HKGA 2MVVA 4DG9A 2KGAA 2KW2A 2N50A 4BPFA 2LPKA 2LIWA 4PXHB 2FVFA 2K0YA 4MRTC 2K0XA 2MD9A 4IZ6A 2KG8A 2N5IA 2FADA 2KOPA 2JGPA 2CNRA 5KP8B 2FQ0A 2AFDA 2FHSC 2ROQA 1AF8A 2MVUA 2XZ0D 2LOLA 2K94A 2KWLA 2KOOA 1X3OA 4BPHA 2FQ2A 2EHTA 3CE7A 3GZLA 3EJBA 3LMOA 5HVCA 2JU2A 2LTEA 4PWVB 5KP6B 3EJDA 2MY5A 5EJDA 1DNYA 2GDYA 2CG5B 4BPGA 2KG9A 2JQ4A 2MR7A 2KG6A 2EHSA 2KORA 2DNWA 2L4BA 1DV5A 1OR5A 2MF4A 5HV8A 2GDWA 2X2BA 2FACA 2L22A 2PNGA 3EJEA 2AVAA 3RG2A 3GZMA 2VSQA 2N6YA 2L0QA 2CGQA 1HQBA 1ACPA 1KLPA 1NQ4A 2KR5A 2GDXA 2LMLA 2XZ1C 4H2XC 2FVEA 1L0IA 2LIUA 2FQ1A 1VKUA 2FAEA 1F80D 2QNWA 2MR8A 2N6ZA 2K92A 2JU1A 2L9FA 4NEOA
chains in the Genus database with same CATH superfamily
3CCQP 4COCA 4CA3A 4H2WC 1L0HA 2KGCA 3G6EP 3CCJP 2K93A 1KQSO 3CCUP 3H0DA 2GYKA 2VLOA 2AFEA 2GZGA 3RG6C 2P9XA 5JPAA 1M74A 1HY8A 2PEMA 2GZJA 3CCSP 1YHQP 2VLPA 3CPWO 2KW2A 3P05A 2LIWA 2EG5A 3CMEP 3G29A 4IZ6A 2OTLP 3Q20A 2GZFA 1VQ5P 3G26A 2JGPA 2FQ0A 2Z46A 1K73Q 2AFDA 2ROQA 1AF8A 3G71P 1RNIA 1VQNP 2EHTA 3EJBA 1W2BO 2VLNA 1DNYA 1YJNP 4BPGA 2L6EA 3CC2P 2K0DX 2PEOA 2QEXP 1E6JP 1JJ2O 3EJEA 3GZMA 2EFJA 5HGNA 1KLPA 3U43A 2KR5A 2GDXA 4H2XC 2XV6A 2FQ1A 2MR8A 2N6ZA 2K92A 4NEOA 1A8OA 2EIAA 2LKIA 2CQ8A 2LL8A 1YI2P 2N5HA 3DS4A 1IUQA 1BXIA 5CZDB 3E2DA 1QVFO 2KOQA 3HYBA 2GZEA 4DG9A 2JB0A 2CWOA 2LPKA 4GR2A 1AYIA 3H47A 4PXHB 2K5XA 1NJIQ 2K0XA 7CEIA 1EOQA 2GZIA 1VQKP 2KOPA 2CNRA 5KP8B 2JYGA 2FHSC 1VHNA 2XZ0D 2K94A 1ZNVA 4U0DA 4U0AA 4BPHA 4U0EA 4XFZA 3GZLA 3LMOA 1YJ9P 2PENA 3CC7P 2NO8A 3EJDA 2MY5A 1VQLP 1QRJA 5EJDA 3HZQA 2GDYA 2JBGA 3GKLC 2DGYA 1GXHA 2KG6A 2VLQA 1KC8Q 4F37A 2KORA 1DV5A 1OR5A 3G21A 3H4EA 5HV8A 2X2BA 3G1IA 1Q86Q 2PNGA 4COPA 3RG2A 4QNBA 2N6YA 2OARA 2CGQA 3DS0A 2XT1A 1KD1Q 1NQ4A 1VQ7P 3CCEP 1IMPA 2M8PA 2FVEA 1AUMA 1K30A 1VKUA 1BAJA 2FAEA 5I4TG 1D1DA 2JAZA 2N98A 3NTEA 2FVAA 1T8KA 1M90Q 2KOSA 2KGEA 4M0IA 1FR2A 3DS2A 4U0BA 2AF8A 3NY7B 4HKGA 2KGAA 1Z6MA 2ERHA 3DS5A 2N50A 1YJWP 2FVFA 2K0YA 4MRTC 3WBHA 1RO0A 2MD9A 2PY8A 2KODA 1K8AQ 2KG8A 2N5IA 1MZ8A 1UNKA 2FADA 3CCRP 3DS1A 2XXMA 3DPHA 5EW5E 2KWLA 1X3OA 2FQ2A 3GJNA 5HVCA 2JU2A 2LTEA 5KP6B 3CC4P 2PEKA 3OW2O 4IPYA 3G4SP 4GR6A 2CG5B 2MR7A 2L4BA 4PH1A 2MF4A 2GDWA 3CD6P 1VQMP 4WYMA 3G28A 2AVAA 5F2KA 5HGMA 1GXGA 2E1MA 3DS3A 1VQPP 1IMQA 1HQBA 1ACPA 3MGEA 3CXCO 4XFYA 1L0IA 2LIUA 2Z44A 2QNWA 2PEJA 2OTJP 2JU1A 2L9FA 1S72P 2PEQA 5HGOA 2KGDA 2PEIA 3I56P 1QVGO 2K2QA 1YITP 1Q7YQ 3CCVP 1EMVA 1Q81Q 1RO2A 4H2YC 2M5RA 4U0FA 5KP7B 3B4QA 4R0MA 3DTJA 3G1GA 2M8LA 2MVVA 1M6NA 5HGLA 4XFXA 5F2NA 4BPFA 2LF4A 2JYLA 3CCMP 4U0CA 2ONTA 5F2OA 2BHVA 3I55P 1VQ8P 1ZMBA 1YIJP 2MVUA 2LOLA 1VQ4P 3CCLP 3VRLC 1VQOP 4PH0A 2KOOA 1A43A 5BS1A 3CE7A 4PWVB 3G0VA 3LRYA 1CEIA 1K9MQ 4QKOA 1Q82Q 1UJZA 4XROA 2KG9A 2JQ4A 2DNWA 4UHPB 2BUOA 5DCKA 2FACA 2L22A 2WPTA 2JO0A 2VSQA 3B5IA 2L0QA 2Z45A 1EIAA 3CMAP 2M8NA 1VQ6P 1M6EX 2LMLA 3M1MA 2QA4P 2XZ1C 1E0HA 1N8RQ 1VQ9P 4XRQA 1F80D 1M1KQ 1GPJA 5BS2A 2EHSA
chains in the Genus database with same CATH topology
2N98A 4CA3A 4H2WC 2LKIA 1L0HA 2KGCA 2KGDA 2FVAA 2K93A 1T8KA 2CQ8A 2LL8A 2K2QA 2AFEA 2KOSA 2KGEA 2N5HA 4H2YC 2M5RA 5KP7B 2AF8A 5CZDB 1HY8A 4R0MA 3NY7B 2KOQA 4HKGA 2MVVA 4DG9A 2KGAA 2KW2A 2N50A 4BPFA 2LPKA 2LIWA 4PXHB 2FVFA 2K0YA 4MRTC 2K0XA 2MD9A 4IZ6A 2KG8A 2N5IA 2FADA 2KOPA 2JGPA 2CNRA 5KP8B 2FQ0A 2AFDA 2FHSC 2ROQA 1AF8A 2MVUA 2XZ0D 2LOLA 2K94A 2KWLA 2KOOA 1X3OA 4BPHA 2FQ2A 2EHTA 3CE7A 3GZLA 3EJBA 3LMOA 5HVCA 2JU2A 2LTEA 4PWVB 5KP6B 3EJDA 2MY5A 5EJDA 1DNYA 2GDYA 2CG5B 4BPGA 2KG9A 2JQ4A 2MR7A 2KG6A 2EHSA 2KORA 2DNWA 2L4BA 1DV5A 1OR5A 2MF4A 5HV8A 2GDWA 2X2BA 2FACA 2L22A 2PNGA 3EJEA 2AVAA 3RG2A 3GZMA 2VSQA 2N6YA 2L0QA 2CGQA 1HQBA 1ACPA 1KLPA 1NQ4A 2KR5A 2GDXA 2LMLA 2XZ1C 4H2XC 2FVEA 1L0IA 2LIUA 2FQ1A 1VKUA 2FAEA 1F80D 2QNWA 2MR8A 2N6ZA 2K92A 2JU1A 2L9FA 4NEOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2N98 A;  4CA3 A;  4H2W C;  2LKI A;  1L0H A;  2KGC A;  2KGD A;  2FVA A;  2K93 A;  1T8K A;  2CQ8 A;  2LL8 A;  2K2Q A;  2AFE A;  2KOS A;  2KGE A;  2N5H A;  4H2Y C;  2M5R A;  5KP7 B;  2AF8 A;  5CZD B;  1HY8 A;  4R0M A;  3NY7 B;  2KOQ A;  4HKG A;  2MVV A;  4DG9 A;  2KGA A;  2KW2 A;  2N50 A;  4BPF A;  2LPK A;  2LIW A;  4PXH B;  2FVF A;  2K0Y A;  4MRT C;  2K0X A;  2MD9 A;  4IZ6 A;  2KG8 A;  2N5I A;  2FAD A;  2KOP A;  2JGP A;  2CNR A;  5KP8 B;  2FQ0 A;  2AFD A;  2FHS C;  2ROQ A;  1AF8 A;  2MVU A;  2XZ0 D;  2LOL A;  2K94 A;  2KWL A;  2KOO A;  1X3O A;  4BPH A;  2FQ2 A;  2EHT A;  3CE7 A;  3GZL A;  3EJB A;  3LMO A;  5HVC A;  2JU2 A;  2LTE A;  4PWV B;  5KP6 B;  3EJD A;  2MY5 A;  5EJD A;  1DNY A;  2GDY A;  2CG5 B;  4BPG A;  2KG9 A;  2JQ4 A;  2MR7 A;  2KG6 A;  2EHS A;  2KOR A;  2DNW A;  2L4B A;  1DV5 A;  1OR5 A;  2MF4 A;  5HV8 A;  2GDW A;  2X2B A;  2FAC A;  2L22 A;  2PNG A;  3EJE A;  2AVA A;  3RG2 A;  3GZM A;  2VSQ A;  2N6Y A;  2L0Q A;  2CGQ A;  1HQB A;  1ACP A;  1KLP A;  1NQ4 A;  2KR5 A;  2GDX A;  2LML A;  2XZ1 C;  4H2X C;  2FVE A;  1L0I A;  2LIU A;  2FQ1 A;  1VKU A;  2FAE A;  1F80 D;  2QNW A;  2MR8 A;  2N6Z A;  2K92 A;  2JU1 A;  2L9F A;  4NEO A; 
#chains in the Genus database with same CATH topology
 3CCQ P;  4COC A;  4CA3 A;  4H2W C;  1L0H A;  2KGC A;  3G6E P;  3CCJ P;  2K93 A;  1KQS O;  3CCU P;  3H0D A;  2GYK A;  2VLO A;  2AFE A;  2GZG A;  3RG6 C;  2P9X A;  5JPA A;  1M74 A;  1HY8 A;  2PEM A;  2GZJ A;  3CCS P;  1YHQ P;  2VLP A;  3CPW O;  2KW2 A;  3P05 A;  2LIW A;  2EG5 A;  3CME P;  3G29 A;  4IZ6 A;  2OTL P;  3Q20 A;  2GZF A;  1VQ5 P;  3G26 A;  2JGP A;  2FQ0 A;  2Z46 A;  1K73 Q;  2AFD A;  2ROQ A;  1AF8 A;  3G71 P;  1RNI A;  1VQN P;  2EHT A;  3EJB A;  1W2B O;  2VLN A;  1DNY A;  1YJN P;  4BPG A;  2L6E A;  3CC2 P;  2K0D X;  2PEO A;  2QEX P;  1E6J P;  1JJ2 O;  3EJE A;  3GZM A;  2EFJ A;  5HGN A;  1KLP A;  3U43 A;  2KR5 A;  2GDX A;  4H2X C;  2XV6 A;  2FQ1 A;  2MR8 A;  2N6Z A;  2K92 A;  4NEO A;  1A8O A;  2EIA A;  2LKI A;  2CQ8 A;  2LL8 A;  1YI2 P;  2N5H A;  3DS4 A;  1IUQ A;  1BXI A;  5CZD B;  3E2D A;  1QVF O;  2KOQ A;  3HYB A;  2GZE A;  4DG9 A;  2JB0 A;  2CWO A;  2LPK A;  4GR2 A;  1AYI A;  3H47 A;  4PXH B;  2K5X A;  1NJI Q;  2K0X A;  7CEI A;  1EOQ A;  2GZI A;  1VQK P;  2KOP A;  2CNR A;  5KP8 B;  2JYG A;  2FHS C;  1VHN A;  2XZ0 D;  2K94 A;  1ZNV A;  4U0D A;  4U0A A;  4BPH A;  4U0E A;  4XFZ A;  3GZL A;  3LMO A;  1YJ9 P;  2PEN A;  3CC7 P;  2NO8 A;  3EJD A;  2MY5 A;  1VQL P;  1QRJ A;  5EJD A;  3HZQ A;  2GDY A;  2JBG A;  3GKL C;  2DGY A;  1GXH A;  2KG6 A;  2VLQ A;  1KC8 Q;  4F37 A;  2KOR A;  1DV5 A;  1OR5 A;  3G21 A;  3H4E A;  5HV8 A;  2X2B A;  3G1I A;  1Q86 Q;  2PNG A;  4COP A;  3RG2 A;  4QNB A;  2N6Y A;  2OAR A;  2CGQ A;  3DS0 A;  2XT1 A;  1KD1 Q;  1NQ4 A;  1VQ7 P;  3CCE P;  1IMP A;  2M8P A;  2FVE A;  1AUM A;  1K30 A;  1VKU A;  1BAJ A;  2FAE A;  5I4T G;  1D1D A;  2JAZ A;  2N98 A;  3NTE A;  2FVA A;  1T8K A;  1M90 Q;  2KOS A;  2KGE A;  4M0I A;  1FR2 A;  3DS2 A;  4U0B A;  2AF8 A;  3NY7 B;  4HKG A;  2KGA A;  1Z6M A;  2ERH A;  3DS5 A;  2N50 A;  1YJW P;  2FVF A;  2K0Y A;  4MRT C;  3WBH A;  1RO0 A;  2MD9 A;  2PY8 A;  2KOD A;  1K8A Q;  2KG8 A;  2N5I A;  1MZ8 A;  1UNK A;  2FAD A;  3CCR P;  3DS1 A;  2XXM A;  3DPH A;  5EW5 E;  2KWL A;  1X3O A;  2FQ2 A;  3GJN A;  5HVC A;  2JU2 A;  2LTE A;  5KP6 B;  3CC4 P;  2PEK A;  3OW2 O;  4IPY A;  3G4S P;  4GR6 A;  2CG5 B;  2MR7 A;  2L4B A;  4PH1 A;  2MF4 A;  2GDW A;  3CD6 P;  1VQM P;  4WYM A;  3G28 A;  2AVA A;  5F2K A;  5HGM A;  1GXG A;  2E1M A;  3DS3 A;  1VQP P;  1IMQ A;  1HQB A;  1ACP A;  3MGE A;  3CXC O;  4XFY A;  1L0I A;  2LIU A;  2Z44 A;  2QNW A;  2PEJ A;  2OTJ P;  2JU1 A;  2L9F A;  1S72 P;  2PEQ A;  5HGO A;  2KGD A;  2PEI A;  3I56 P;  1QVG O;  2K2Q A;  1YIT P;  1Q7Y Q;  3CCV P;  1EMV A;  1Q81 Q;  1RO2 A;  4H2Y C;  2M5R A;  4U0F A;  5KP7 B;  3B4Q A;  4R0M A;  3DTJ A;  3G1G A;  2M8L A;  2MVV A;  1M6N A;  5HGL A;  4XFX A;  5F2N A;  4BPF A;  2LF4 A;  2JYL A;  3CCM P;  4U0C A;  2ONT A;  5F2O A;  2BHV A;  3I55 P;  1VQ8 P;  1ZMB A;  1YIJ P;  2MVU A;  2LOL A;  1VQ4 P;  3CCL P;  3VRL C;  1VQO P;  4PH0 A;  2KOO A;  1A43 A;  5BS1 A;  3CE7 A;  4PWV B;  3G0V A;  3LRY A;  1CEI A;  1K9M Q;  4QKO A;  1Q82 Q;  1UJZ A;  4XRO A;  2KG9 A;  2JQ4 A;  2DNW A;  4UHP B;  2BUO A;  5DCK A;  2FAC A;  2L22 A;  2WPT A;  2JO0 A;  2VSQ A;  3B5I A;  2L0Q A;  2Z45 A;  1EIA A;  3CMA P;  2M8N A;  1VQ6 P;  1M6E X;  2LML A;  3M1M A;  2QA4 P;  2XZ1 C;  1E0H A;  1N8R Q;  1VQ9 P;  4XRQ A;  1F80 D;  1M1K Q;  1GPJ A;  5BS2 A;  2EHS A; 
#chains in the Genus database with same CATH homology
 2N98 A;  4CA3 A;  4H2W C;  2LKI A;  1L0H A;  2KGC A;  2KGD A;  2FVA A;  2K93 A;  1T8K A;  2CQ8 A;  2LL8 A;  2K2Q A;  2AFE A;  2KOS A;  2KGE A;  2N5H A;  4H2Y C;  2M5R A;  5KP7 B;  2AF8 A;  5CZD B;  1HY8 A;  4R0M A;  3NY7 B;  2KOQ A;  4HKG A;  2MVV A;  4DG9 A;  2KGA A;  2KW2 A;  2N50 A;  4BPF A;  2LPK A;  2LIW A;  4PXH B;  2FVF A;  2K0Y A;  4MRT C;  2K0X A;  2MD9 A;  4IZ6 A;  2KG8 A;  2N5I A;  2FAD A;  2KOP A;  2JGP A;  2CNR A;  5KP8 B;  2FQ0 A;  2AFD A;  2FHS C;  2ROQ A;  1AF8 A;  2MVU A;  2XZ0 D;  2LOL A;  2K94 A;  2KWL A;  2KOO A;  1X3O A;  4BPH A;  2FQ2 A;  2EHT A;  3CE7 A;  3GZL A;  3EJB A;  3LMO A;  5HVC A;  2JU2 A;  2LTE A;  4PWV B;  5KP6 B;  3EJD A;  2MY5 A;  5EJD A;  1DNY A;  2GDY A;  2CG5 B;  4BPG A;  2KG9 A;  2JQ4 A;  2MR7 A;  2KG6 A;  2EHS A;  2KOR A;  2DNW A;  2L4B A;  1DV5 A;  1OR5 A;  2MF4 A;  5HV8 A;  2GDW A;  2X2B A;  2FAC A;  2L22 A;  2PNG A;  3EJE A;  2AVA A;  3RG2 A;  3GZM A;  2VSQ A;  2N6Y A;  2L0Q A;  2CGQ A;  1HQB A;  1ACP A;  1KLP A;  1NQ4 A;  2KR5 A;  2GDX A;  2LML A;  2XZ1 C;  4H2X C;  2FVE A;  1L0I A;  2LIU A;  2FQ1 A;  1VKU A;  2FAE A;  1F80 D;  2QNW A;  2MR8 A;  2N6Z A;  2K92 A;  2JU1 A;  2L9F A;  4NEO A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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