2KWLA

Solution structure of acyl carrier protein from borrelia burgdorferi
Total Genus 18
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
18
sequence length
84
structure length
84
Chain Sequence
GPGSMDNDEIFSKVRSIISEQLDKKEDEITTDSRFVEDLNADSLDIYELLYLLEEAFDDKIPENEANEFETVGDVVNFIKKRKG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Lipid binding protein
molecule keywords Acyl carrier protein
publication title NMR structure of an acyl-carrier protein from Borrelia burgdorferi.
pubmed doi rcsb
source organism Borrelia burgdorferi
total genus 18
structure length 84
sequence length 84
ec nomenclature
pdb deposition date 2010-04-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2kwlA00
2KGEA 2N5HA 2VSQA 4MRTC 4R0MA 4BPHA 2K94A 1L0IA 2EHSA 2FVAA 2N50A 2XZ1C 3GZLA 2LIUA 2QNWA 2K2QA 2LKIA 2KOPA 2FHSC 2L4BA 4PXHB 2LTEA 1ACPA 2KWLA 2KG8A 2DNWA 2FADA 2LL8A 2FAEA 3CE7A 2MR8A 2N6YA 2KG9A 4H2YC 3NY7B 3GZMA 1VKUA 3EJBA 2LPKA 2MVUA 5HV8A 2K93A 2CG5B 5EJDA 3EJEA 4PWVB 2JU2A 1DV5A 4H2WC 2M5RA 3EJDA 2MY5A 2KGDA 2CNRA 2KORA 4H2XC 2N6ZA 1NQ4A 2KG6A 2N5IA 2JU1A 2X2BA 2FACA 2KW2A 2FQ2A 2L9FA 1KLPA 1OR5A 2K0YA 1AF8A 2JQ4A 2XZ0D 5KP6B 2MVVA 1F80D 2FVEA 2LIWA 2AF8A 2KGCA 1HQBA 4BPGA 2AVAA 4CA3A 2PNGA 2LOLA 2MF4A 1X3OA 1L0HA 5HVCA 2MR7A 2L22A 2CQ8A 2JGPA 4HKGA 1T8KA 2K92A 2AFEA 2GDWA 2ROQA 2FQ1A 2KOQA 2L0QA 4NEOA 2FQ0A 1HY8A 2N98A 2EHTA 2FVFA 2KOOA 2KGAA 4DG9A 5CZDB 2LMLA 2K0XA 5KP7B 2GDYA 3LMOA 2KR5A 4BPFA 2KOSA 2GDXA 3RG2A 1DNYA 2AFDA 4IZ6A 2MD9A 5KP8B 2CGQA
chains in the Genus database with same CATH superfamily
3U43A 2N5HA 4MRTC 1YITP 4R0MA 4BPHA 1L0IA 2EHSA 2N50A 3GZLA 2VLQA 3MGEA 1M6NA 2GZFA 3CCMP 3DPHA 2KOPA 2JAZA 5F2OA 4H2YC 2M8PA 1UJZA 1VKUA 1JJ2O 3OW2O 3EJBA 2BHVA 3CCEP 5HV8A 2K93A 1E0HA 3CCVP 3EJDA 2KGDA 5HGMA 3GKLC 3I56P 1VQMP 2KG6A 2ONTA 2M8NA 2CWOA 2X2BA 1QVFO 1AF8A 4PH0A 1RO0A 2JQ4A 5I4TG 3G1GA 2FVEA 1IUQA 2LIWA 3CC4P 1HQBA 4CA3A 3G1IA 2VLPA 4U0EA 1X3OA 1L0HA 3NTEA 2L22A 1M90Q 2CQ8A 2XT1A 3CCJP 4U0AA 1VQ7P 4HKGA 3H0DA 1VQLP 2GZGA 1VQ4P 4GR6A 2N98A 1A43A 2KOOA 5CZDB 2GDYA 3LMOA 4IPYA 3DS5A 2GDXA 3B4QA 2MD9A 4U0BA 2QA4P 3H4EA 2NO8A 5JPAA 3G0VA 2XZ1C 2L6EA 3CPWO 2QEXP 1QRJA 3I55P 3DS0A 2KODA 2XXMA 2MR8A 4XFYA 1N8RQ 2GZIA 4QKOA 3HYBA 2MVUA 3G71P 1K73Q 3EJEA 4H2WC 2OTLP 2MY5A 2N6ZA 4XRQA 1VQ8P 2N5IA 1VHNA 1EMVA 1MZ8A 2FQ2A 1GXHA 2XZ0D 5KP6B 1RO2A 2LF4A 1F80D 1EOQA 3B5IA 1NJIQ 3VRLC 3CC7P 2MF4A 5HVCA 2MR7A 1Q86Q 3GJNA 3DS1A 1CEIA 2PEMA 2K92A 2GDWA 2ROQA 2EG5A 5F2KA 2FQ1A 2L0QA 2XV6A 4UHPB 2FQ0A 3CMAP 1HY8A 2EHTA 2FVFA 2EIAA 2LMLA 1IMQA 3CCRP 5DCKA 1RNIA 4BPFA 2OTJP 2AFDA 5F2NA 5BS1A 3WBHA 2KGEA 2VSQA 1GPJA 2JYLA 1M1KQ 3G6EP 3CXCO 2LIUA 1M74A 2WPTA 1M6EX 2JBGA 2LKIA 2FHSC 2LTEA 1E6JP 1VQOP 2KG8A 2DNWA 2FADA 2LL8A 2N6YA 2JB0A 2KG9A 3DS4A 3LRYA 4COCA 2Z45A 2BUOA 1KC8Q 2GZEA 2JYGA 3G28A 1IMPA 2M8LA 2GZJA 1DV5A 2CNRA 1W2BO 4H2XC 1NQ4A 5EW5E 3M1MA 3DS2A 2JU1A 1YIJP 2ERHA 2FACA 2KW2A 1KLPA 2K0YA 3RG6C 1VQPP 1BAJA 4GR2A 1Q81Q 2KGCA 3DTJA 2PY8A 1Z6MA 1AUMA 2LOLA 1K9MQ 1UNKA 3CC2P 1KQSO 4QNBA 3CMEP 2JGPA 4M0IA 2KOQA 1A8OA 4NEOA 1K8AQ 4U0DA 3HZQA 7CEIA 2KR5A 2PEKA 2GYKA 4F37A 1VQNP 3RG2A 1DNYA 4IZ6A 1YJNP 1K30A 2PEQA 1YI2P 2PENA 2Z44A 5HGLA 2K94A 2FVAA 2PEOA 3P05A 4U0CA 3CCUP 2QNWA 2K2QA 1S72P 4WYMA 2L4BA 4PXHB 1ACPA 2KWLA 3CE7A 2FAEA 5BS2A 3DS3A 1Q7YQ 3NY7B 3E2DA 1GXGA 1QVGO 3GZMA 3G4SP 1VQ6P 2LPKA 2K0DX 3G21A 1EIAA 5HGNA 2CG5B 5EJDA 3CCQP 4PWVB 2JU2A 2M5RA 1ZNVA 4COPA 4U0FA 2KORA 5HGOA 2VLNA 4XROA 1AYIA 1VQ5P 2L9FA 1OR5A 2MVVA 1ZMBA 2OARA 2E1MA 3Q20A 2AF8A 2PEIA 2VLOA 2DGYA 2Z46A 1VQ9P 4BPGA 2AVAA 2PEJA 4PH1A 2PNGA 1D1DA 1YJWP 2P9XA 2JO0A 3H47A 1BXIA 1FR2A 3CCLP 1T8KA 1KD1Q 2AFEA 1YJ9P 3G26A 1VQKP 3CCSP 2KGAA 4DG9A 2K0XA 4XFXA 5KP7B 3G29A 1Q82Q 2KOSA 3CD6P 2EFJA 1YHQP 5KP8B 2CGQA 4XFZA 2K5XA
chains in the Genus database with same CATH topology
2KGEA 2N5HA 2VSQA 4MRTC 4R0MA 4BPHA 2K94A 1L0IA 2EHSA 2FVAA 2N50A 2XZ1C 3GZLA 2LIUA 2QNWA 2K2QA 2LKIA 2KOPA 2FHSC 2L4BA 4PXHB 2LTEA 1ACPA 2KWLA 2KG8A 2DNWA 2FADA 2LL8A 2FAEA 3CE7A 2MR8A 2N6YA 2KG9A 4H2YC 3NY7B 3GZMA 1VKUA 3EJBA 2LPKA 2MVUA 5HV8A 2K93A 2CG5B 5EJDA 3EJEA 4PWVB 2JU2A 1DV5A 4H2WC 2M5RA 3EJDA 2MY5A 2KGDA 2CNRA 2KORA 4H2XC 2N6ZA 1NQ4A 2KG6A 2N5IA 2JU1A 2X2BA 2FACA 2KW2A 2FQ2A 2L9FA 1KLPA 1OR5A 2K0YA 1AF8A 2JQ4A 2XZ0D 5KP6B 2MVVA 1F80D 2FVEA 2LIWA 2AF8A 2KGCA 1HQBA 4BPGA 2AVAA 4CA3A 2PNGA 2LOLA 2MF4A 1X3OA 1L0HA 5HVCA 2MR7A 2L22A 2CQ8A 2JGPA 4HKGA 1T8KA 2K92A 2AFEA 2GDWA 2ROQA 2FQ1A 2KOQA 2L0QA 4NEOA 2FQ0A 1HY8A 2N98A 2EHTA 2FVFA 2KOOA 2KGAA 4DG9A 5CZDB 2LMLA 2K0XA 5KP7B 2GDYA 3LMOA 2KR5A 4BPFA 2KOSA 2GDXA 3RG2A 1DNYA 2AFDA 4IZ6A 2MD9A 5KP8B 2CGQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2KGE A;  2N5H A;  2VSQ A;  4MRT C;  4R0M A;  4BPH A;  2K94 A;  1L0I A;  2EHS A;  2FVA A;  2N50 A;  2XZ1 C;  3GZL A;  2LIU A;  2QNW A;  2K2Q A;  2LKI A;  2KOP A;  2FHS C;  2L4B A;  4PXH B;  2LTE A;  1ACP A;  2KWL A;  2KG8 A;  2DNW A;  2FAD A;  2LL8 A;  2FAE A;  3CE7 A;  2MR8 A;  2N6Y A;  2KG9 A;  4H2Y C;  3NY7 B;  3GZM A;  1VKU A;  3EJB A;  2LPK A;  2MVU A;  5HV8 A;  2K93 A;  2CG5 B;  5EJD A;  3EJE A;  4PWV B;  2JU2 A;  1DV5 A;  4H2W C;  2M5R A;  3EJD A;  2MY5 A;  2KGD A;  2CNR A;  2KOR A;  4H2X C;  2N6Z A;  1NQ4 A;  2KG6 A;  2N5I A;  2JU1 A;  2X2B A;  2FAC A;  2KW2 A;  2FQ2 A;  2L9F A;  1KLP A;  1OR5 A;  2K0Y A;  1AF8 A;  2JQ4 A;  2XZ0 D;  5KP6 B;  2MVV A;  1F80 D;  2FVE A;  2LIW A;  2AF8 A;  2KGC A;  1HQB A;  4BPG A;  2AVA A;  4CA3 A;  2PNG A;  2LOL A;  2MF4 A;  1X3O A;  1L0H A;  5HVC A;  2MR7 A;  2L22 A;  2CQ8 A;  2JGP A;  4HKG A;  1T8K A;  2K92 A;  2AFE A;  2GDW A;  2ROQ A;  2FQ1 A;  2KOQ A;  2L0Q A;  4NEO A;  2FQ0 A;  1HY8 A;  2N98 A;  2EHT A;  2FVF A;  2KOO A;  2KGA A;  4DG9 A;  5CZD B;  2LML A;  2K0X A;  5KP7 B;  2GDY A;  3LMO A;  2KR5 A;  4BPF A;  2KOS A;  2GDX A;  3RG2 A;  1DNY A;  2AFD A;  4IZ6 A;  2MD9 A;  5KP8 B;  2CGQ A; 
#chains in the Genus database with same CATH topology
 3U43 A;  2N5H A;  4MRT C;  1YIT P;  4R0M A;  4BPH A;  1L0I A;  2EHS A;  2N50 A;  3GZL A;  2VLQ A;  3MGE A;  1M6N A;  2GZF A;  3CCM P;  3DPH A;  2KOP A;  2JAZ A;  5F2O A;  4H2Y C;  2M8P A;  1UJZ A;  1VKU A;  1JJ2 O;  3OW2 O;  3EJB A;  2BHV A;  3CCE P;  5HV8 A;  2K93 A;  1E0H A;  3CCV P;  3EJD A;  2KGD A;  5HGM A;  3GKL C;  3I56 P;  1VQM P;  2KG6 A;  2ONT A;  2M8N A;  2CWO A;  2X2B A;  1QVF O;  1AF8 A;  4PH0 A;  1RO0 A;  2JQ4 A;  5I4T G;  3G1G A;  2FVE A;  1IUQ A;  2LIW A;  3CC4 P;  1HQB A;  4CA3 A;  3G1I A;  2VLP A;  4U0E A;  1X3O A;  1L0H A;  3NTE A;  2L22 A;  1M90 Q;  2CQ8 A;  2XT1 A;  3CCJ P;  4U0A A;  1VQ7 P;  4HKG A;  3H0D A;  1VQL P;  2GZG A;  1VQ4 P;  4GR6 A;  2N98 A;  1A43 A;  2KOO A;  5CZD B;  2GDY A;  3LMO A;  4IPY A;  3DS5 A;  2GDX A;  3B4Q A;  2MD9 A;  4U0B A;  2QA4 P;  3H4E A;  2NO8 A;  5JPA A;  3G0V A;  2XZ1 C;  2L6E A;  3CPW O;  2QEX P;  1QRJ A;  3I55 P;  3DS0 A;  2KOD A;  2XXM A;  2MR8 A;  4XFY A;  1N8R Q;  2GZI A;  4QKO A;  3HYB A;  2MVU A;  3G71 P;  1K73 Q;  3EJE A;  4H2W C;  2OTL P;  2MY5 A;  2N6Z A;  4XRQ A;  1VQ8 P;  2N5I A;  1VHN A;  1EMV A;  1MZ8 A;  2FQ2 A;  1GXH A;  2XZ0 D;  5KP6 B;  1RO2 A;  2LF4 A;  1F80 D;  1EOQ A;  3B5I A;  1NJI Q;  3VRL C;  3CC7 P;  2MF4 A;  5HVC A;  2MR7 A;  1Q86 Q;  3GJN A;  3DS1 A;  1CEI A;  2PEM A;  2K92 A;  2GDW A;  2ROQ A;  2EG5 A;  5F2K A;  2FQ1 A;  2L0Q A;  2XV6 A;  4UHP B;  2FQ0 A;  3CMA P;  1HY8 A;  2EHT A;  2FVF A;  2EIA A;  2LML A;  1IMQ A;  3CCR P;  5DCK A;  1RNI A;  4BPF A;  2OTJ P;  2AFD A;  5F2N A;  5BS1 A;  3WBH A;  2KGE A;  2VSQ A;  1GPJ A;  2JYL A;  1M1K Q;  3G6E P;  3CXC O;  2LIU A;  1M74 A;  2WPT A;  1M6E X;  2JBG A;  2LKI A;  2FHS C;  2LTE A;  1E6J P;  1VQO P;  2KG8 A;  2DNW A;  2FAD A;  2LL8 A;  2N6Y A;  2JB0 A;  2KG9 A;  3DS4 A;  3LRY A;  4COC A;  2Z45 A;  2BUO A;  1KC8 Q;  2GZE A;  2JYG A;  3G28 A;  1IMP A;  2M8L A;  2GZJ A;  1DV5 A;  2CNR A;  1W2B O;  4H2X C;  1NQ4 A;  5EW5 E;  3M1M A;  3DS2 A;  2JU1 A;  1YIJ P;  2ERH A;  2FAC A;  2KW2 A;  1KLP A;  2K0Y A;  3RG6 C;  1VQP P;  1BAJ A;  4GR2 A;  1Q81 Q;  2KGC A;  3DTJ A;  2PY8 A;  1Z6M A;  1AUM A;  2LOL A;  1K9M Q;  1UNK A;  3CC2 P;  1KQS O;  4QNB A;  3CME P;  2JGP A;  4M0I A;  2KOQ A;  1A8O A;  4NEO A;  1K8A Q;  4U0D A;  3HZQ A;  7CEI A;  2KR5 A;  2PEK A;  2GYK A;  4F37 A;  1VQN P;  3RG2 A;  1DNY A;  4IZ6 A;  1YJN P;  1K30 A;  2PEQ A;  1YI2 P;  2PEN A;  2Z44 A;  5HGL A;  2K94 A;  2FVA A;  2PEO A;  3P05 A;  4U0C A;  3CCU P;  2QNW A;  2K2Q A;  1S72 P;  4WYM A;  2L4B A;  4PXH B;  1ACP A;  2KWL A;  3CE7 A;  2FAE A;  5BS2 A;  3DS3 A;  1Q7Y Q;  3NY7 B;  3E2D A;  1GXG A;  1QVG O;  3GZM A;  3G4S P;  1VQ6 P;  2LPK A;  2K0D X;  3G21 A;  1EIA A;  5HGN A;  2CG5 B;  5EJD A;  3CCQ P;  4PWV B;  2JU2 A;  2M5R A;  1ZNV A;  4COP A;  4U0F A;  2KOR A;  5HGO A;  2VLN A;  4XRO A;  1AYI A;  1VQ5 P;  2L9F A;  1OR5 A;  2MVV A;  1ZMB A;  2OAR A;  2E1M A;  3Q20 A;  2AF8 A;  2PEI A;  2VLO A;  2DGY A;  2Z46 A;  1VQ9 P;  4BPG A;  2AVA A;  2PEJ A;  4PH1 A;  2PNG A;  1D1D A;  1YJW P;  2P9X A;  2JO0 A;  3H47 A;  1BXI A;  1FR2 A;  3CCL P;  1T8K A;  1KD1 Q;  2AFE A;  1YJ9 P;  3G26 A;  1VQK P;  3CCS P;  2KGA A;  4DG9 A;  2K0X A;  4XFX A;  5KP7 B;  3G29 A;  1Q82 Q;  2KOS A;  3CD6 P;  2EFJ A;  1YHQ P;  5KP8 B;  2CGQ A;  4XFZ A;  2K5X A; 
#chains in the Genus database with same CATH homology
 2KGE A;  2N5H A;  2VSQ A;  4MRT C;  4R0M A;  4BPH A;  2K94 A;  1L0I A;  2EHS A;  2FVA A;  2N50 A;  2XZ1 C;  3GZL A;  2LIU A;  2QNW A;  2K2Q A;  2LKI A;  2KOP A;  2FHS C;  2L4B A;  4PXH B;  2LTE A;  1ACP A;  2KWL A;  2KG8 A;  2DNW A;  2FAD A;  2LL8 A;  2FAE A;  3CE7 A;  2MR8 A;  2N6Y A;  2KG9 A;  4H2Y C;  3NY7 B;  3GZM A;  1VKU A;  3EJB A;  2LPK A;  2MVU A;  5HV8 A;  2K93 A;  2CG5 B;  5EJD A;  3EJE A;  4PWV B;  2JU2 A;  1DV5 A;  4H2W C;  2M5R A;  3EJD A;  2MY5 A;  2KGD A;  2CNR A;  2KOR A;  4H2X C;  2N6Z A;  1NQ4 A;  2KG6 A;  2N5I A;  2JU1 A;  2X2B A;  2FAC A;  2KW2 A;  2FQ2 A;  2L9F A;  1KLP A;  1OR5 A;  2K0Y A;  1AF8 A;  2JQ4 A;  2XZ0 D;  5KP6 B;  2MVV A;  1F80 D;  2FVE A;  2LIW A;  2AF8 A;  2KGC A;  1HQB A;  4BPG A;  2AVA A;  4CA3 A;  2PNG A;  2LOL A;  2MF4 A;  1X3O A;  1L0H A;  5HVC A;  2MR7 A;  2L22 A;  2CQ8 A;  2JGP A;  4HKG A;  1T8K A;  2K92 A;  2AFE A;  2GDW A;  2ROQ A;  2FQ1 A;  2KOQ A;  2L0Q A;  4NEO A;  2FQ0 A;  1HY8 A;  2N98 A;  2EHT A;  2FVF A;  2KOO A;  2KGA A;  4DG9 A;  5CZD B;  2LML A;  2K0X A;  5KP7 B;  2GDY A;  3LMO A;  2KR5 A;  4BPF A;  2KOS A;  2GDX A;  3RG2 A;  1DNY A;  2AFD A;  4IZ6 A;  2MD9 A;  5KP8 B;  2CGQ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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