5KP6B

Crystal structure of the curacin biosynthetic pathway hmg synthase in complex with apo donor-acp
Total Genus 27
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
78
structure length
78
Chain Sequence
MSKEQVLKIIKKYTREIAPELEDSPLEPTDSLKKLGIDSVNRAEIIMMVMEDLSLNIPRIELAGAKNIGELADLFAAK
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Transferase
source organism Moorea producens 3l
publication title Anatomy of the beta-branching enzyme of polyketide biosynthesis and its interaction with an acyl-ACP substrate.
pubmed doi rcsb
molecule keywords CurD
total genus 27
structure length 78
sequence length 78
ec nomenclature
pdb deposition date 2016-07-02

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 5kp6B00
2K93A 2KOQA 2LL8A 1HQBA 2KR5A 5EJDA 2CG5B 2FVEA 2K0YA 2KG8A 2KGAA 3EJEA 2QNWA 1F80D 4HKGA 2LIWA 2JU1A 4H2YC 5HV8A 3EJDA 4NEOA 3GZMA 5KP7B 1VKUA 3NY7B 2FAEA 2ROQA 3EJBA 2FACA 2N98A 2X2BA 3GZLA 3CE7A 2K92A 4PXHB 2PNGA 2KORA 4BPGA 1ACPA 2LKIA 4R0MA 2KOOA 2AVAA 2KGDA 1DNYA 2K0XA 2L22A 2L9FA 1L0HA 2LTEA 2N5IA 2FQ0A 2M5RA 1AF8A 2K94A 2AF8A 2MVVA 2L4BA 2GDYA 1L0IA 1T8KA 4BPFA 1X3OA 2KOPA 2CGQA 2FQ2A 2MF4A 4CA3A 3LMOA 4IZ6A 2KG9A 2EHSA 2KGEA 2DNWA 4DG9A 2KOSA 2XZ1C 2JU2A 2XZ0D 2AFEA 2CQ8A 2FHSC 2LIUA 2GDWA 2K2QA 2N6YA 2VSQA 2LOLA 2FADA 2MVUA 4H2WC 5HVCA 3RG2A 2N5HA 2MR7A 1KLPA 2KW2A 2LPKA 2KG6A 2CNRA 2JQ4A 2KWLA 2JGPA 4MRTC 2AFDA 5CZDB 2MR8A 2GDXA 4PWVB 1OR5A 2LMLA 1DV5A 2EHTA 4BPHA 2KGCA 1HY8A 2FVFA 2N50A 2N6ZA 5KP8B 2L0QA 2MY5A 5KP6B 4H2XC 1NQ4A 2MD9A 2FVAA 2FQ1A
chains in the Genus database with same CATH superfamily
1ZNVA 1VQMP 1N8RQ 2CG5B 5F2NA 2KG8A 2K0YA 3EJEA 2QNWA 4XFZA 3DS0A 2LIWA 4IPYA 1VQ8P 2JYGA 2ROQA 3EJBA 1FR2A 2FACA 1IMPA 1VHNA 1QVGO 2BHVA 2K92A 4QKOA 4U0AA 2KORA 4GR6A 3HZQA 4R0MA 2AVAA 2K0XA 2GZGA 5HGLA 2LTEA 1EMVA 1AF8A 2AF8A 5F2OA 4COCA 1AUMA 2KOPA 1KQSO 4CA3A 1AYIA 1Q86Q 1Z6MA 2EHSA 1EOQA 4DG9A 1YJ9P 2XZ1C 3GKLC 2JU2A 3WBHA 2XV6A 1M6NA 2GZJA 2AFEA 2LIUA 4XROA 2GDWA 4H2WC 2CWOA 3CMEP 1K9MQ 5BS1A 2KW2A 1K73Q 2CNRA 2JQ4A 1QVFO 1S72P 2OARA 5HGOA 2EHTA 2PEMA 2KGCA 2NO8A 2N50A 2JB0A 3DS3A 4F37A 3RG6C 1NQ4A 2MD9A 3DS2A 2K0DX 1YJWP 2FQ1A 2GZFA 1KD1Q 2LL8A 3CMAP 4XRQA 4WYMA 2KR5A 3LRYA 5EW5E 1F80D 3B4QA 2JYLA 4NEOA 3GZMA 2JO0A 2FAEA 3Q20A 2N98A 3DS1A 3GZLA 2OTLP 3CCQP 1M90Q 2PNGA 4BPGA 5I4TG 1ACPA 2LKIA 3G6EP 1IMQA 1Q81Q 2KGDA 2ONTA 2L9FA 2QA4P 2N5IA 3CCEP 1BAJA 2K94A 1RO2A 4BPFA 1L0IA 1T8KA 3CCRP 3LMOA 2M8LA 1GXHA 3GJNA 2P9XA 1UJZA 2KGEA 3B5IA 1KC8Q 3NTEA 3I56P 2ERHA 2XZ0D 2FHSC 3MGEA 1A8OA 2VSQA 1YIJP 1Q82Q 2LF4A 2PEKA 5JPAA 5HVCA 2K5XA 4U0FA 2N5HA 2MR7A 3E2DA 5BS2A 1NJIQ 1E0HA 4QNBA 2KWLA 4MRTC 2M8PA 4PWVB 1DV5A 3U43A 3VRLC 4BPHA 3G29A 3CCJP 1D1DA 2JBGA 3H0DA 1UNKA 3CC4P 2K93A 2KOQA 1HQBA 5EJDA 4PH0A 1RNIA 5F2KA 4COPA 2JU1A 2EIAA 5HGMA 3EJDA 2JAZA 4U0DA 3CC7P 3G0VA 3G71P 3CC2P 2X2BA 2QEXP 2Z44A 2WPTA 3HYBA 4PXHB 1VQKP 1YHQP 3DS5A 1DNYA 3CCSP 2L22A 1L0HA 4U0CA 1W2BO 2L4BA 2GDYA 2VLQA 2DGYA 2CGQA 2FQ2A 4M0IA 3G28A 4IZ6A 2Z45A 1IUQA 2KG9A 3G21A 2DNWA 1Q7YQ 7CEIA 2PEJA 3DTJA 1QRJA 2PEOA 3OW2O 1K30A 3H4EA 5DCKA 2FADA 1VQ9P 1VQ5P 1KLPA 1JJ2O 1RO0A 2JGPA 2AFDA 2GDXA 1OR5A 1M74A 3G1GA 2LMLA 2OTJP 1HY8A 2KODA 3CCMP 1ZMBA 4GR2A 5KP6B 1MZ8A 3G4SP 1EIAA 3P05A 1YJNP 4U0EA 3CCVP 2FVEA 2KGAA 2GYKA 1VQNP 2XXMA 4HKGA 2PENA 3M1MA 4H2YC 5HV8A 2PY8A 3H47A 2L6EA 5KP7B 1VKUA 3NY7B 3G1IA 2EG5A 3CE7A 1YI2P 2KOOA 3G26A 1VQOP 1A43A 2FQ0A 2M5RA 1YITP 2MVVA 3CCUP 1GPJA 1X3OA 2PEIA 2VLPA 2PEQA 3DS4A 1VQ6P 2MF4A 2VLNA 2Z46A 2KOSA 4XFXA 4U0BA 2GZEA 1VQ7P 1GXGA 2CQ8A 2XT1A 1VQ4P 2VLOA 2K2QA 2N6YA 1CEIA 2LOLA 1M1KQ 2MVUA 2EFJA 2M8NA 3RG2A 4XFYA 2LPKA 2KG6A 1K8AQ 1VQLP 1BXIA 5CZDB 2MR8A 2E1MA 3CPWO 3CD6P 3CXCO 2GZIA 5HGNA 2FVFA 3DPHA 2BUOA 4PH1A 1M6EX 2N6ZA 4UHPB 5KP8B 2L0QA 2MY5A 1VQPP 4H2XC 1E6JP 3CCLP 3I55P 2FVAA
chains in the Genus database with same CATH topology
2K93A 2KOQA 2LL8A 1HQBA 2KR5A 5EJDA 2CG5B 2FVEA 2K0YA 2KG8A 2KGAA 3EJEA 2QNWA 1F80D 4HKGA 2LIWA 2JU1A 4H2YC 5HV8A 3EJDA 4NEOA 3GZMA 5KP7B 1VKUA 3NY7B 2FAEA 2ROQA 3EJBA 2FACA 2N98A 2X2BA 3GZLA 3CE7A 2K92A 4PXHB 2PNGA 2KORA 4BPGA 1ACPA 2LKIA 4R0MA 2KOOA 2AVAA 2KGDA 1DNYA 2K0XA 2L22A 2L9FA 1L0HA 2LTEA 2N5IA 2FQ0A 2M5RA 1AF8A 2K94A 2AF8A 2MVVA 2L4BA 2GDYA 1L0IA 1T8KA 4BPFA 1X3OA 2KOPA 2CGQA 2FQ2A 2MF4A 4CA3A 3LMOA 4IZ6A 2KG9A 2EHSA 2KGEA 2DNWA 4DG9A 2KOSA 2XZ1C 2JU2A 2XZ0D 2AFEA 2CQ8A 2FHSC 2LIUA 2GDWA 2K2QA 2N6YA 2VSQA 2LOLA 2FADA 2MVUA 4H2WC 5HVCA 3RG2A 2N5HA 2MR7A 1KLPA 2KW2A 2LPKA 2KG6A 2CNRA 2JQ4A 2KWLA 2JGPA 4MRTC 2AFDA 5CZDB 2MR8A 2GDXA 4PWVB 1OR5A 2LMLA 1DV5A 2EHTA 4BPHA 2KGCA 1HY8A 2FVFA 2N50A 2N6ZA 5KP8B 2L0QA 2MY5A 5KP6B 4H2XC 1NQ4A 2MD9A 2FVAA 2FQ1A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2K93 A;  2KOQ A;  2LL8 A;  1HQB A;  2KR5 A;  5EJD A;  2CG5 B;  2FVE A;  2K0Y A;  2KG8 A;  2KGA A;  3EJE A;  2QNW A;  1F80 D;  4HKG A;  2LIW A;  2JU1 A;  4H2Y C;  5HV8 A;  3EJD A;  4NEO A;  3GZM A;  5KP7 B;  1VKU A;  3NY7 B;  2FAE A;  2ROQ A;  3EJB A;  2FAC A;  2N98 A;  2X2B A;  3GZL A;  3CE7 A;  2K92 A;  4PXH B;  2PNG A;  2KOR A;  4BPG A;  1ACP A;  2LKI A;  4R0M A;  2KOO A;  2AVA A;  2KGD A;  1DNY A;  2K0X A;  2L22 A;  2L9F A;  1L0H A;  2LTE A;  2N5I A;  2FQ0 A;  2M5R A;  1AF8 A;  2K94 A;  2AF8 A;  2MVV A;  2L4B A;  2GDY A;  1L0I A;  1T8K A;  4BPF A;  1X3O A;  2KOP A;  2CGQ A;  2FQ2 A;  2MF4 A;  4CA3 A;  3LMO A;  4IZ6 A;  2KG9 A;  2EHS A;  2KGE A;  2DNW A;  4DG9 A;  2KOS A;  2XZ1 C;  2JU2 A;  2XZ0 D;  2AFE A;  2CQ8 A;  2FHS C;  2LIU A;  2GDW A;  2K2Q A;  2N6Y A;  2VSQ A;  2LOL A;  2FAD A;  2MVU A;  4H2W C;  5HVC A;  3RG2 A;  2N5H A;  2MR7 A;  1KLP A;  2KW2 A;  2LPK A;  2KG6 A;  2CNR A;  2JQ4 A;  2KWL A;  2JGP A;  4MRT C;  2AFD A;  5CZD B;  2MR8 A;  2GDX A;  4PWV B;  1OR5 A;  2LML A;  1DV5 A;  2EHT A;  4BPH A;  2KGC A;  1HY8 A;  2FVF A;  2N50 A;  2N6Z A;  5KP8 B;  2L0Q A;  2MY5 A;  5KP6 B;  4H2X C;  1NQ4 A;  2MD9 A;  2FVA A;  2FQ1 A; 
#chains in the Genus database with same CATH topology
 1ZNV A;  1VQM P;  1N8R Q;  2CG5 B;  5F2N A;  2KG8 A;  2K0Y A;  3EJE A;  2QNW A;  4XFZ A;  3DS0 A;  2LIW A;  4IPY A;  1VQ8 P;  2JYG A;  2ROQ A;  3EJB A;  1FR2 A;  2FAC A;  1IMP A;  1VHN A;  1QVG O;  2BHV A;  2K92 A;  4QKO A;  4U0A A;  2KOR A;  4GR6 A;  3HZQ A;  4R0M A;  2AVA A;  2K0X A;  2GZG A;  5HGL A;  2LTE A;  1EMV A;  1AF8 A;  2AF8 A;  5F2O A;  4COC A;  1AUM A;  2KOP A;  1KQS O;  4CA3 A;  1AYI A;  1Q86 Q;  1Z6M A;  2EHS A;  1EOQ A;  4DG9 A;  1YJ9 P;  2XZ1 C;  3GKL C;  2JU2 A;  3WBH A;  2XV6 A;  1M6N A;  2GZJ A;  2AFE A;  2LIU A;  4XRO A;  2GDW A;  4H2W C;  2CWO A;  3CME P;  1K9M Q;  5BS1 A;  2KW2 A;  1K73 Q;  2CNR A;  2JQ4 A;  1QVF O;  1S72 P;  2OAR A;  5HGO A;  2EHT A;  2PEM A;  2KGC A;  2NO8 A;  2N50 A;  2JB0 A;  3DS3 A;  4F37 A;  3RG6 C;  1NQ4 A;  2MD9 A;  3DS2 A;  2K0D X;  1YJW P;  2FQ1 A;  2GZF A;  1KD1 Q;  2LL8 A;  3CMA P;  4XRQ A;  4WYM A;  2KR5 A;  3LRY A;  5EW5 E;  1F80 D;  3B4Q A;  2JYL A;  4NEO A;  3GZM A;  2JO0 A;  2FAE A;  3Q20 A;  2N98 A;  3DS1 A;  3GZL A;  2OTL P;  3CCQ P;  1M90 Q;  2PNG A;  4BPG A;  5I4T G;  1ACP A;  2LKI A;  3G6E P;  1IMQ A;  1Q81 Q;  2KGD A;  2ONT A;  2L9F A;  2QA4 P;  2N5I A;  3CCE P;  1BAJ A;  2K94 A;  1RO2 A;  4BPF A;  1L0I A;  1T8K A;  3CCR P;  3LMO A;  2M8L A;  1GXH A;  3GJN A;  2P9X A;  1UJZ A;  2KGE A;  3B5I A;  1KC8 Q;  3NTE A;  3I56 P;  2ERH A;  2XZ0 D;  2FHS C;  3MGE A;  1A8O A;  2VSQ A;  1YIJ P;  1Q82 Q;  2LF4 A;  2PEK A;  5JPA A;  5HVC A;  2K5X A;  4U0F A;  2N5H A;  2MR7 A;  3E2D A;  5BS2 A;  1NJI Q;  1E0H A;  4QNB A;  2KWL A;  4MRT C;  2M8P A;  4PWV B;  1DV5 A;  3U43 A;  3VRL C;  4BPH A;  3G29 A;  3CCJ P;  1D1D A;  2JBG A;  3H0D A;  1UNK A;  3CC4 P;  2K93 A;  2KOQ A;  1HQB A;  5EJD A;  4PH0 A;  1RNI A;  5F2K A;  4COP A;  2JU1 A;  2EIA A;  5HGM A;  3EJD A;  2JAZ A;  4U0D A;  3CC7 P;  3G0V A;  3G71 P;  3CC2 P;  2X2B A;  2QEX P;  2Z44 A;  2WPT A;  3HYB A;  4PXH B;  1VQK P;  1YHQ P;  3DS5 A;  1DNY A;  3CCS P;  2L22 A;  1L0H A;  4U0C A;  1W2B O;  2L4B A;  2GDY A;  2VLQ A;  2DGY A;  2CGQ A;  2FQ2 A;  4M0I A;  3G28 A;  4IZ6 A;  2Z45 A;  1IUQ A;  2KG9 A;  3G21 A;  2DNW A;  1Q7Y Q;  7CEI A;  2PEJ A;  3DTJ A;  1QRJ A;  2PEO A;  3OW2 O;  1K30 A;  3H4E A;  5DCK A;  2FAD A;  1VQ9 P;  1VQ5 P;  1KLP A;  1JJ2 O;  1RO0 A;  2JGP A;  2AFD A;  2GDX A;  1OR5 A;  1M74 A;  3G1G A;  2LML A;  2OTJ P;  1HY8 A;  2KOD A;  3CCM P;  1ZMB A;  4GR2 A;  5KP6 B;  1MZ8 A;  3G4S P;  1EIA A;  3P05 A;  1YJN P;  4U0E A;  3CCV P;  2FVE A;  2KGA A;  2GYK A;  1VQN P;  2XXM A;  4HKG A;  2PEN A;  3M1M A;  4H2Y C;  5HV8 A;  2PY8 A;  3H47 A;  2L6E A;  5KP7 B;  1VKU A;  3NY7 B;  3G1I A;  2EG5 A;  3CE7 A;  1YI2 P;  2KOO A;  3G26 A;  1VQO P;  1A43 A;  2FQ0 A;  2M5R A;  1YIT P;  2MVV A;  3CCU P;  1GPJ A;  1X3O A;  2PEI A;  2VLP A;  2PEQ A;  3DS4 A;  1VQ6 P;  2MF4 A;  2VLN A;  2Z46 A;  2KOS A;  4XFX A;  4U0B A;  2GZE A;  1VQ7 P;  1GXG A;  2CQ8 A;  2XT1 A;  1VQ4 P;  2VLO A;  2K2Q A;  2N6Y A;  1CEI A;  2LOL A;  1M1K Q;  2MVU A;  2EFJ A;  2M8N A;  3RG2 A;  4XFY A;  2LPK A;  2KG6 A;  1K8A Q;  1VQL P;  1BXI A;  5CZD B;  2MR8 A;  2E1M A;  3CPW O;  3CD6 P;  3CXC O;  2GZI A;  5HGN A;  2FVF A;  3DPH A;  2BUO A;  4PH1 A;  1M6E X;  2N6Z A;  4UHP B;  5KP8 B;  2L0Q A;  2MY5 A;  1VQP P;  4H2X C;  1E6J P;  3CCL P;  3I55 P;  2FVA A; 
#chains in the Genus database with same CATH homology
 2K93 A;  2KOQ A;  2LL8 A;  1HQB A;  2KR5 A;  5EJD A;  2CG5 B;  2FVE A;  2K0Y A;  2KG8 A;  2KGA A;  3EJE A;  2QNW A;  1F80 D;  4HKG A;  2LIW A;  2JU1 A;  4H2Y C;  5HV8 A;  3EJD A;  4NEO A;  3GZM A;  5KP7 B;  1VKU A;  3NY7 B;  2FAE A;  2ROQ A;  3EJB A;  2FAC A;  2N98 A;  2X2B A;  3GZL A;  3CE7 A;  2K92 A;  4PXH B;  2PNG A;  2KOR A;  4BPG A;  1ACP A;  2LKI A;  4R0M A;  2KOO A;  2AVA A;  2KGD A;  1DNY A;  2K0X A;  2L22 A;  2L9F A;  1L0H A;  2LTE A;  2N5I A;  2FQ0 A;  2M5R A;  1AF8 A;  2K94 A;  2AF8 A;  2MVV A;  2L4B A;  2GDY A;  1L0I A;  1T8K A;  4BPF A;  1X3O A;  2KOP A;  2CGQ A;  2FQ2 A;  2MF4 A;  4CA3 A;  3LMO A;  4IZ6 A;  2KG9 A;  2EHS A;  2KGE A;  2DNW A;  4DG9 A;  2KOS A;  2XZ1 C;  2JU2 A;  2XZ0 D;  2AFE A;  2CQ8 A;  2FHS C;  2LIU A;  2GDW A;  2K2Q A;  2N6Y A;  2VSQ A;  2LOL A;  2FAD A;  2MVU A;  4H2W C;  5HVC A;  3RG2 A;  2N5H A;  2MR7 A;  1KLP A;  2KW2 A;  2LPK A;  2KG6 A;  2CNR A;  2JQ4 A;  2KWL A;  2JGP A;  4MRT C;  2AFD A;  5CZD B;  2MR8 A;  2GDX A;  4PWV B;  1OR5 A;  2LML A;  1DV5 A;  2EHT A;  4BPH A;  2KGC A;  1HY8 A;  2FVF A;  2N50 A;  2N6Z A;  5KP8 B;  2L0Q A;  2MY5 A;  5KP6 B;  4H2X C;  1NQ4 A;  2MD9 A;  2FVA A;  2FQ1 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...