2N5HA

Pltl-holo
Total Genus 24
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
24
sequence length
90
structure length
90
Chain Sequence
b'MDGEEVKEKIRRYIMEDLIGPSAKEDELDDQTPLLEWGILNSMNIVKLMVYIRDEMGVSIPSTHITGKYFKDLNAISRTVEQLKAESALE'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structure and Substrate Sequestration in the Pyoluteorin Type II Peptidyl Carrier Protein PltL.
pubmed doi rcsb
molecule keywords Peptidyl carrier protein PltL
source organism Pseudomonas protegens
molecule tags Transport protein
total genus 24
structure length 90
sequence length 90
ec nomenclature
pdb deposition date 2015-07-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2n5hA00
2AFDA 4H2WC 2XZ0D 2MR7A 2FQ0A 1AF8A 2KOSA 2MR8A 2DNWA 2N50A 2GDXA 4BPGA 5KP6B 2QNWA 3GZLA 2CGQA 2KOQA 2FVFA 2KGEA 2K92A 4HKGA 2X2BA 2FVEA 3EJEA 2KOPA 2JU2A 2L0QA 2N98A 1HY8A 2FAEA 1L0IA 2JGPA 2MVVA 1KLPA 3CE7A 4IZ6A 1X3OA 2KR5A 2ROQA 2KW2A 2LIUA 5CZDB 2CNRA 2LIWA 3EJBA 2KGAA 2VSQA 2MVUA 2FHSC 2K0XA 2K93A 1VKUA 2K94A 2CQ8A 2FVAA 2GDWA 2L22A 2MF4A 2N6YA 5KP7B 1ACPA 2MY5A 4PWVB 2LOLA 5KP8B 2PNGA 1DNYA 4DG9A 2EHSA 2L4BA 3LMOA 2LKIA 2EHTA 2KG6A 2FQ1A 2L9FA 2N5HA 4H2XC 2KG8A 2FQ2A 5EJDA 2LPKA 2FADA 2KG9A 1L0HA 2GDYA 5HV8A 2KOOA 2MD9A 5HVCA 4NEOA 2AVAA 2LL8A 2AF8A 2KGCA 1T8KA 4BPHA 2M5RA 3GZMA 1DV5A 2XZ1C 2K2QA 2JQ4A 2KGDA 1OR5A 2AFEA 2FACA 1F80D 4MRTC 2KORA 2JU1A 4CA3A 2K0YA 2LMLA 2LTEA 2N6ZA 4BPFA 3RG2A 1NQ4A 4H2YC 1HQBA 2CG5B 4R0MA 3NY7B 4PXHB 3EJDA 2KWLA 2N5IA
chains in the Genus database with same CATH superfamily
2AFDA 2MR7A 1RO2A 2KOSA 5KP6B 2DNWA 1YI2P 2WPTA 2EIAA 2CGQA 2KOQA 3CD6P 1YJ9P 4U0EA 4XFXA 4PH1A 2JYLA 1KC8Q 1QRJA 3B5IA 2ROQA 5CZDB 3CC2P 4WYMA 3U43A 2K0XA 2K93A 3I56P 3MGEA 2GDWA 2MF4A 2L22A 4F37A 1UJZA 1ACPA 2QA4P 3CCMP 4DG9A 4QKOA 3G26A 2LKIA 2PY8A 2FQ1A 1GPJA 1RNIA 2VLOA 2FQ2A 2GDYA 2OARA 2ERHA 1IMQA 1EIAA 2KOOA 3GJNA 2GZEA 3CCUP 3HZQA 2LL8A 1VQPP 2AF8A 2KGCA 1GXGA 4BPHA 2K2QA 2KGDA 2AFEA 2FACA 5F2NA 2GZJA 3CXCO 1QVFO 5HGMA 3CCVP 1YITP 3RG2A 1K8AQ 1Z6MA 3NY7B 3WBHA 2FQ0A 3GKLC 3B4QA 2MR8A 4BPGA 2N50A 3CCJP 1BAJA 2KGEA 2K92A 1YJWP 3H0DA 1Q81Q 1VQNP 2FAEA 1VQ7P 2GZFA 1N8RQ 1YJNP 1X3OA 2KW2A 2CNRA 2KGAA 2VSQA 1VQOP 2CWOA 2JBGA 3CC4P 1Q86Q 2XV6A 2K94A 5KP7B 2MY5A 1E6JP 2PEQA 2ONTA 4XFZA 2DGYA 2OTLP 2EHSA 3DS0A 3LMOA 2KG6A 5BS1A 2L9FA 2PENA 1VQKP 5F2KA 5HGLA 2P9XA 4U0FA 1L0HA 5HV8A 2NO8A 1KQSO 1VQ9P 1AUMA 2AVAA 3CMEP 3G6EP 1T8KA 5EW5E 2M5RA 1DV5A 2XZ1C 1F80D 2KORA 3CCQP 4QNBA 4CA3A 3G1GA 4PH0A 4BPFA 2L6EA 2VLNA 1NQ4A 1HQBA 4M0IA 2M8LA 2Z46A 4PXHB 2BUOA 3EJDA 2KWLA 2PEIA 3H4EA 2XZ0D 5BS2A 3OW2O 1S72P 1AF8A 3DS2A 1AYIA 2GDXA 3H47A 2QNWA 3GZLA 3I55P 3M1MA 2JAZA 2X2BA 3DS3A 2FVEA 2KOPA 1IMPA 5HGOA 1ZMBA 1K9MQ 2XXMA 2N98A 4GR2A 5F2OA 1M1KQ 2GZGA 1KLPA 3CE7A 2LIUA 5DCKA 3EJBA 4UHPB 3G0VA 2XT1A 3NTEA 1VKUA 2N6YA 5KP8B 1FR2A 1M74A 2L4BA 2JB0A 2EHTA 3CCEP 1CEIA 1NJIQ 4U0AA 3DS1A 5EJDA 2LPKA 2JO0A 2EFJA 2VLQA 2Z45A 2OTJP 2MD9A 5HVCA 4NEOA 5I4TG 3RG6C 1VQ4P 3CPWO 1YIJP 3GZMA 1D1DA 2JQ4A 3G28A 1K73Q 1VQ6P 4MRTC 4GR6A 2K0YA 3DTJA 3DS4A 3G29A 4XRQA 3CMAP 2M8NA 2CG5B 4R0MA 4U0CA 7CEIA 4H2WC 3DPHA 3CCRP 3CC7P 2EG5A 3HYBA 1A8OA 1UNKA 2FVFA 1JJ2O 2PEOA 4HKGA 3G71P 3EJEA 1MZ8A 1VQLP 1GXHA 4XROA 2GYKA 2JU2A 5HGNA 2L0QA 2QEXP 1HY8A 4XFYA 1L0IA 2KODA 2JGPA 4U0BA 2MVVA 3DS5A 4IZ6A 1Q7YQ 2KR5A 1M6EX 2BHVA 2LIWA 4IPYA 2MVUA 2GZIA 2FHSC 1K30A 1VQ5P 2LF4A 2CQ8A 2FVAA 4PWVB 2LOLA 1M6NA 2PNGA 1DNYA 1ZNVA 1VQ8P 4COPA 3P05A 1VHNA 2N5HA 4H2XC 2KG8A 1E0HA 2K5XA 2FADA 2KG9A 3Q20A 3G1IA 1EOQA 3G4SP 3VRLC 1BXIA 3LRYA 4COCA 2Z44A 2PEJA 1QVGO 2E1MA 1KD1Q 1OR5A 2VLPA 2JYGA 3CCLP 1YHQP 2JU1A 1Q82Q 3CCSP 2M8PA 1A43A 2LMLA 2LTEA 3E2DA 2N6ZA 1EMVA 1IUQA 1M90Q 1RO0A 1VQMP 1W2BO 4H2YC 5JPAA 2PEKA 2K0DX 4U0DA 3G21A 2PEMA 2N5IA
chains in the Genus database with same CATH topology
2AFDA 4H2WC 2XZ0D 2MR7A 2FQ0A 1AF8A 2KOSA 2MR8A 2DNWA 2N50A 2GDXA 4BPGA 5KP6B 2QNWA 3GZLA 2CGQA 2KOQA 2FVFA 2KGEA 2K92A 4HKGA 2X2BA 2FVEA 3EJEA 2KOPA 2JU2A 2L0QA 2N98A 1HY8A 2FAEA 1L0IA 2JGPA 2MVVA 1KLPA 3CE7A 4IZ6A 1X3OA 2KR5A 2ROQA 2KW2A 2LIUA 5CZDB 2CNRA 2LIWA 3EJBA 2KGAA 2VSQA 2MVUA 2FHSC 2K0XA 2K93A 1VKUA 2K94A 2CQ8A 2FVAA 2GDWA 2L22A 2MF4A 2N6YA 5KP7B 1ACPA 2MY5A 4PWVB 2LOLA 5KP8B 2PNGA 1DNYA 4DG9A 2EHSA 2L4BA 3LMOA 2LKIA 2EHTA 2KG6A 2FQ1A 2L9FA 2N5HA 4H2XC 2KG8A 2FQ2A 5EJDA 2LPKA 2FADA 2KG9A 1L0HA 2GDYA 5HV8A 2KOOA 2MD9A 5HVCA 4NEOA 2AVAA 2LL8A 2AF8A 2KGCA 1T8KA 4BPHA 2M5RA 3GZMA 1DV5A 2XZ1C 2K2QA 2JQ4A 2KGDA 1OR5A 2AFEA 2FACA 1F80D 4MRTC 2KORA 2JU1A 4CA3A 2K0YA 2LMLA 2LTEA 2N6ZA 4BPFA 3RG2A 1NQ4A 4H2YC 1HQBA 2CG5B 4R0MA 3NY7B 4PXHB 3EJDA 2KWLA 2N5IA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2AFD A;  4H2W C;  2XZ0 D;  2MR7 A;  2FQ0 A;  1AF8 A;  2KOS A;  2MR8 A;  2DNW A;  2N50 A;  2GDX A;  4BPG A;  5KP6 B;  2QNW A;  3GZL A;  2CGQ A;  2KOQ A;  2FVF A;  2KGE A;  2K92 A;  4HKG A;  2X2B A;  2FVE A;  3EJE A;  2KOP A;  2JU2 A;  2L0Q A;  2N98 A;  1HY8 A;  2FAE A;  1L0I A;  2JGP A;  2MVV A;  1KLP A;  3CE7 A;  4IZ6 A;  1X3O A;  2KR5 A;  2ROQ A;  2KW2 A;  2LIU A;  5CZD B;  2CNR A;  2LIW A;  3EJB A;  2KGA A;  2VSQ A;  2MVU A;  2FHS C;  2K0X A;  2K93 A;  1VKU A;  2K94 A;  2CQ8 A;  2FVA A;  2GDW A;  2L22 A;  2MF4 A;  2N6Y A;  5KP7 B;  1ACP A;  2MY5 A;  4PWV B;  2LOL A;  5KP8 B;  2PNG A;  1DNY A;  4DG9 A;  2EHS A;  2L4B A;  3LMO A;  2LKI A;  2EHT A;  2KG6 A;  2FQ1 A;  2L9F A;  2N5H A;  4H2X C;  2KG8 A;  2FQ2 A;  5EJD A;  2LPK A;  2FAD A;  2KG9 A;  1L0H A;  2GDY A;  5HV8 A;  2KOO A;  2MD9 A;  5HVC A;  4NEO A;  2AVA A;  2LL8 A;  2AF8 A;  2KGC A;  1T8K A;  4BPH A;  2M5R A;  3GZM A;  1DV5 A;  2XZ1 C;  2K2Q A;  2JQ4 A;  2KGD A;  1OR5 A;  2AFE A;  2FAC A;  1F80 D;  4MRT C;  2KOR A;  2JU1 A;  4CA3 A;  2K0Y A;  2LML A;  2LTE A;  2N6Z A;  4BPF A;  3RG2 A;  1NQ4 A;  4H2Y C;  1HQB A;  2CG5 B;  4R0M A;  3NY7 B;  4PXH B;  3EJD A;  2KWL A;  2N5I A; 
#chains in the Genus database with same CATH topology
 2AFD A;  2MR7 A;  1RO2 A;  2KOS A;  5KP6 B;  2DNW A;  1YI2 P;  2WPT A;  2EIA A;  2CGQ A;  2KOQ A;  3CD6 P;  1YJ9 P;  4U0E A;  4XFX A;  4PH1 A;  2JYL A;  1KC8 Q;  1QRJ A;  3B5I A;  2ROQ A;  5CZD B;  3CC2 P;  4WYM A;  3U43 A;  2K0X A;  2K93 A;  3I56 P;  3MGE A;  2GDW A;  2MF4 A;  2L22 A;  4F37 A;  1UJZ A;  1ACP A;  2QA4 P;  3CCM P;  4DG9 A;  4QKO A;  3G26 A;  2LKI A;  2PY8 A;  2FQ1 A;  1GPJ A;  1RNI A;  2VLO A;  2FQ2 A;  2GDY A;  2OAR A;  2ERH A;  1IMQ A;  1EIA A;  2KOO A;  3GJN A;  2GZE A;  3CCU P;  3HZQ A;  2LL8 A;  1VQP P;  2AF8 A;  2KGC A;  1GXG A;  4BPH A;  2K2Q A;  2KGD A;  2AFE A;  2FAC A;  5F2N A;  2GZJ A;  3CXC O;  1QVF O;  5HGM A;  3CCV P;  1YIT P;  3RG2 A;  1K8A Q;  1Z6M A;  3NY7 B;  3WBH A;  2FQ0 A;  3GKL C;  3B4Q A;  2MR8 A;  4BPG A;  2N50 A;  3CCJ P;  1BAJ A;  2KGE A;  2K92 A;  1YJW P;  3H0D A;  1Q81 Q;  1VQN P;  2FAE A;  1VQ7 P;  2GZF A;  1N8R Q;  1YJN P;  1X3O A;  2KW2 A;  2CNR A;  2KGA A;  2VSQ A;  1VQO P;  2CWO A;  2JBG A;  3CC4 P;  1Q86 Q;  2XV6 A;  2K94 A;  5KP7 B;  2MY5 A;  1E6J P;  2PEQ A;  2ONT A;  4XFZ A;  2DGY A;  2OTL P;  2EHS A;  3DS0 A;  3LMO A;  2KG6 A;  5BS1 A;  2L9F A;  2PEN A;  1VQK P;  5F2K A;  5HGL A;  2P9X A;  4U0F A;  1L0H A;  5HV8 A;  2NO8 A;  1KQS O;  1VQ9 P;  1AUM A;  2AVA A;  3CME P;  3G6E P;  1T8K A;  5EW5 E;  2M5R A;  1DV5 A;  2XZ1 C;  1F80 D;  2KOR A;  3CCQ P;  4QNB A;  4CA3 A;  3G1G A;  4PH0 A;  4BPF A;  2L6E A;  2VLN A;  1NQ4 A;  1HQB A;  4M0I A;  2M8L A;  2Z46 A;  4PXH B;  2BUO A;  3EJD A;  2KWL A;  2PEI A;  3H4E A;  2XZ0 D;  5BS2 A;  3OW2 O;  1S72 P;  1AF8 A;  3DS2 A;  1AYI A;  2GDX A;  3H47 A;  2QNW A;  3GZL A;  3I55 P;  3M1M A;  2JAZ A;  2X2B A;  3DS3 A;  2FVE A;  2KOP A;  1IMP A;  5HGO A;  1ZMB A;  1K9M Q;  2XXM A;  2N98 A;  4GR2 A;  5F2O A;  1M1K Q;  2GZG A;  1KLP A;  3CE7 A;  2LIU A;  5DCK A;  3EJB A;  4UHP B;  3G0V A;  2XT1 A;  3NTE A;  1VKU A;  2N6Y A;  5KP8 B;  1FR2 A;  1M74 A;  2L4B A;  2JB0 A;  2EHT A;  3CCE P;  1CEI A;  1NJI Q;  4U0A A;  3DS1 A;  5EJD A;  2LPK A;  2JO0 A;  2EFJ A;  2VLQ A;  2Z45 A;  2OTJ P;  2MD9 A;  5HVC A;  4NEO A;  5I4T G;  3RG6 C;  1VQ4 P;  3CPW O;  1YIJ P;  3GZM A;  1D1D A;  2JQ4 A;  3G28 A;  1K73 Q;  1VQ6 P;  4MRT C;  4GR6 A;  2K0Y A;  3DTJ A;  3DS4 A;  3G29 A;  4XRQ A;  3CMA P;  2M8N A;  2CG5 B;  4R0M A;  4U0C A;  7CEI A;  4H2W C;  3DPH A;  3CCR P;  3CC7 P;  2EG5 A;  3HYB A;  1A8O A;  1UNK A;  2FVF A;  1JJ2 O;  2PEO A;  4HKG A;  3G71 P;  3EJE A;  1MZ8 A;  1VQL P;  1GXH A;  4XRO A;  2GYK A;  2JU2 A;  5HGN A;  2L0Q A;  2QEX P;  1HY8 A;  4XFY A;  1L0I A;  2KOD A;  2JGP A;  4U0B A;  2MVV A;  3DS5 A;  4IZ6 A;  1Q7Y Q;  2KR5 A;  1M6E X;  2BHV A;  2LIW A;  4IPY A;  2MVU A;  2GZI A;  2FHS C;  1K30 A;  1VQ5 P;  2LF4 A;  2CQ8 A;  2FVA A;  4PWV B;  2LOL A;  1M6N A;  2PNG A;  1DNY A;  1ZNV A;  1VQ8 P;  4COP A;  3P05 A;  1VHN A;  2N5H A;  4H2X C;  2KG8 A;  1E0H A;  2K5X A;  2FAD A;  2KG9 A;  3Q20 A;  3G1I A;  1EOQ A;  3G4S P;  3VRL C;  1BXI A;  3LRY A;  4COC A;  2Z44 A;  2PEJ A;  1QVG O;  2E1M A;  1KD1 Q;  1OR5 A;  2VLP A;  2JYG A;  3CCL P;  1YHQ P;  2JU1 A;  1Q82 Q;  3CCS P;  2M8P A;  1A43 A;  2LML A;  2LTE A;  3E2D A;  2N6Z A;  1EMV A;  1IUQ A;  1M90 Q;  1RO0 A;  1VQM P;  1W2B O;  4H2Y C;  5JPA A;  2PEK A;  2K0D X;  4U0D A;  3G21 A;  2PEM A;  2N5I A; 
#chains in the Genus database with same CATH homology
 2AFD A;  4H2W C;  2XZ0 D;  2MR7 A;  2FQ0 A;  1AF8 A;  2KOS A;  2MR8 A;  2DNW A;  2N50 A;  2GDX A;  4BPG A;  5KP6 B;  2QNW A;  3GZL A;  2CGQ A;  2KOQ A;  2FVF A;  2KGE A;  2K92 A;  4HKG A;  2X2B A;  2FVE A;  3EJE A;  2KOP A;  2JU2 A;  2L0Q A;  2N98 A;  1HY8 A;  2FAE A;  1L0I A;  2JGP A;  2MVV A;  1KLP A;  3CE7 A;  4IZ6 A;  1X3O A;  2KR5 A;  2ROQ A;  2KW2 A;  2LIU A;  5CZD B;  2CNR A;  2LIW A;  3EJB A;  2KGA A;  2VSQ A;  2MVU A;  2FHS C;  2K0X A;  2K93 A;  1VKU A;  2K94 A;  2CQ8 A;  2FVA A;  2GDW A;  2L22 A;  2MF4 A;  2N6Y A;  5KP7 B;  1ACP A;  2MY5 A;  4PWV B;  2LOL A;  5KP8 B;  2PNG A;  1DNY A;  4DG9 A;  2EHS A;  2L4B A;  3LMO A;  2LKI A;  2EHT A;  2KG6 A;  2FQ1 A;  2L9F A;  2N5H A;  4H2X C;  2KG8 A;  2FQ2 A;  5EJD A;  2LPK A;  2FAD A;  2KG9 A;  1L0H A;  2GDY A;  5HV8 A;  2KOO A;  2MD9 A;  5HVC A;  4NEO A;  2AVA A;  2LL8 A;  2AF8 A;  2KGC A;  1T8K A;  4BPH A;  2M5R A;  3GZM A;  1DV5 A;  2XZ1 C;  2K2Q A;  2JQ4 A;  2KGD A;  1OR5 A;  2AFE A;  2FAC A;  1F80 D;  4MRT C;  2KOR A;  2JU1 A;  4CA3 A;  2K0Y A;  2LML A;  2LTE A;  2N6Z A;  4BPF A;  3RG2 A;  1NQ4 A;  4H2Y C;  1HQB A;  2CG5 B;  4R0M A;  3NY7 B;  4PXH B;  3EJD A;  2KWL A;  2N5I A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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