2N5HA

Pltl-holo
Total Genus 24
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
24
sequence length
90
structure length
90
Chain Sequence
MDGEEVKEKIRRYIMEDLIGPSAKEDELDDQTPLLEWGILNSMNIVKLMVYIRDEMGVSIPSTHITGKYFKDLNAISRTVEQLKAESALE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
source organism Pseudomonas protegens
publication title Structure and Substrate Sequestration in the Pyoluteorin Type II Peptidyl Carrier Protein PltL.
pubmed doi rcsb
molecule keywords Peptidyl carrier protein PltL
total genus 24
structure length 90
sequence length 90
ec nomenclature
pdb deposition date 2015-07-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2n5hA00
1AF8A 2LIWA 2KOSA 1VKUA 1DV5A 4HKGA 2KGAA 2JGPA 1X3OA 2LKIA 3EJDA 2FVFA 4PWVB 2GDWA 4H2WC 2CGQA 5KP8B 3NY7B 2N6YA 2AF8A 2KOOA 2GDXA 3GZMA 2N5IA 4NEOA 1DNYA 2AFDA 2FVEA 1L0IA 2CQ8A 2JU1A 2FQ1A 2MVUA 2FADA 2EHTA 2N50A 2FQ2A 2FHSC 5CZDB 2KR5A 2L9FA 2ROQA 4H2XC 2XZ0D 2N98A 2MR7A 2KOPA 2VSQA 2LMLA 2N5HA 2DNWA 1NQ4A 4BPHA 1OR5A 2MR8A 1HQBA 2KGDA 2MD9A 5HVCA 2L4BA 2FAEA 2X2BA 2FACA 2JQ4A 2K94A 2KWLA 2MVVA 4MRTC 2MY5A 2PNGA 2AVAA 2XZ1C 3CE7A 2MF4A 2QNWA 2K92A 1F80D 2EHSA 2LTEA 2N6ZA 2CNRA 4BPFA 2KORA 2JU2A 2L22A 2K0XA 4PXHB 2FVAA 5KP7B 1ACPA 2K0YA 2LIUA 3RG2A 4IZ6A 4BPGA 2AFEA 2CG5B 2KGCA 2L0QA 2FQ0A 1HY8A 2KGEA 5EJDA 2M5RA 5KP6B 2KW2A 5HV8A 4R0MA 3LMOA 2GDYA 2KG8A 1L0HA 2K2QA 2KG6A 2LL8A 3GZLA 3EJEA 2KOQA 2LOLA 3EJBA 2KG9A 2K93A 4CA3A 4DG9A 4H2YC 1T8KA 2LPKA 1KLPA
chains in the Genus database with same CATH superfamily
2PEOA 4HKGA 2JGPA 1KQSO 3CCMP 1QRJA 2M8LA 4H2WC 2NO8A 5KP8B 3NY7B 3CMAP 1VQPP 3M1MA 1GXGA 5DCKA 3GZMA 1DNYA 4NEOA 2FVEA 1VQOP 3CC7P 1M90Q 1RNIA 2EIAA 2QA4P 2ROQA 4XROA 1K8AQ 2N98A 4IPYA 1VQLP 4U0CA 2N5HA 2BUOA 2KGDA 3CCSP 2OTLP 3CCVP 3CCLP 2JB0A 2PEIA 4U0EA 1EIAA 3G1GA 1UJZA 2FACA 2K94A 2MVVA 4MRTC 2MY5A 2PNGA 2XZ1C 2JO0A 5EW5E 3NTEA 2M8PA 4QKOA 2JU2A 2OTJP 5KP7B 4BPGA 2AFEA 2GZEA 1YJWP 3CPWO 2XT1A 2KGEA 1YIJP 2KW2A 1M74A 3P05A 5HGLA 1IMPA 4U0BA 2K2QA 3GZLA 3G26A 2KOQA 1M1KQ 1VQ6P 4U0FA 2K93A 4CA3A 2OARA 1VQ9P 2WPTA 2LPKA 1Q7YQ 1M6NA 1AF8A 2PEQA 2LIWA 2KOSA 3G29A 1X3OA 3G4SP 3DS3A 2N6YA 3DPHA 3DTJA 4GR6A 3I56P 2AFDA 2Z45A 2CQ8A 2JU1A 2MVUA 2EHTA 2BHVA 2N50A 3CCUP 2FQ2A 2KODA 2FHSC 1E6JP 3H47A 5CZDB 1JJ2O 2L9FA 2XZ0D 5BS1A 3CCRP 2VLQA 2CWOA 2VSQA 2LMLA 1YJ9P 1AYIA 2L4BA 2FAEA 2X2BA 1M6EX 3Q20A 1YJNP 2PY8A 2JQ4A 1AUMA 2XXMA 3E2DA 4QNBA 5F2KA 4PH0A 2GZFA 2P9XA 2K92A 2GZIA 1YITP 4WYMA 2GZJA 3WBHA 3OW2O 3DS0A 1GPJA 4BPFA 2KORA 2L22A 1Q86Q 1VQKP 4PXHB 2FVAA 2K0YA 2LIUA 1QVGO 2KGCA 1MZ8A 1VQ5P 2FQ0A 3CD6P 5EJDA 2VLPA 3G6EP 1Q82Q 4M0IA 2Z44A 1EOQA 2KG8A 1A8OA 2DGYA 1E0HA 1ZMBA 5BS2A 2LL8A 3B4QA 1N8RQ 3EJBA 1Z6MA 2M8NA 1VQ7P 1VQNP 2E1MA 2Z46A 2KGAA 3H0DA 1KD1Q 3EJDA 2FVFA 4PWVB 2GDWA 3G71P 4F37A 2GZGA 2AF8A 2EG5A 3HZQA 3CCQP 2N5IA 1VQ4P 3HYBA 3G0VA 2KR5A 2ONTA 1FR2A 3CCJP 2JYGA 2MR7A 2XV6A 2DNWA 1NQ4A 4XFYA 2MR8A 5HGOA 4PH1A 3RG6C 1VQMP 5HVCA 1K30A 4XFZA 1IUQA 3CE7A 1QVFO 5JPAA 2QNWA 2VLOA 2PENA 1GXHA 4GR2A 1YI2P 1NJIQ 2N6ZA 2CNRA 1CEIA 1D1DA 2K0XA 2CG5B 3CCEP 2L0QA 4U0AA 3CMEP 1Q81Q 4XRQA 2JAZA 2M5RA 3DS2A 4U0DA 2GDYA 2GYKA 1L0HA 1K9MQ 3GKLC 5F2NA 3G28A 1BXIA 2LF4A 4H2YC 3B5IA 1T8KA 2PEKA 7CEIA 1S72P 1KLPA 1VKUA 1DV5A 2PEJA 1RO0A 3DS5A 4COCA 2LKIA 1W2BO 2CGQA 3G1IA 1A43A 2KOOA 2GDXA 2K5XA 1L0IA 3G21A 2FQ1A 3GJNA 5HGMA 2FADA 3DS4A 3CXCO 1IMQA 4H2XC 5HGNA 2KOPA 3LRYA 4BPHA 1OR5A 1HQBA 1UNKA 2JYLA 2MD9A 5I4TG 2KWLA 2AVAA 2ERHA 3DS1A 2MF4A 1F80D 2EHSA 2K0DX 2LTEA 3CC4P 3CC2P 2L6EA 1ACPA 3RG2A 4IZ6A 3U43A 3H4EA 1KC8Q 2QEXP 1VQ8P 1HY8A 1ZNVA 2EFJA 1RO2A 5KP6B 1EMVA 1BAJA 5HV8A 4R0MA 3LMOA 2JBGA 2KG6A 1K73Q 1YHQP 5F2OA 4XFXA 3EJEA 2LOLA 3VRLC 3MGEA 2KG9A 1VHNA 4COPA 4DG9A 3I55P 2VLNA 4UHPB 2PEMA
chains in the Genus database with same CATH topology
1AF8A 2LIWA 2KOSA 1VKUA 1DV5A 4HKGA 2KGAA 2JGPA 1X3OA 2LKIA 3EJDA 2FVFA 4PWVB 2GDWA 4H2WC 2CGQA 5KP8B 3NY7B 2N6YA 2AF8A 2KOOA 2GDXA 3GZMA 2N5IA 4NEOA 1DNYA 2AFDA 2FVEA 1L0IA 2CQ8A 2JU1A 2FQ1A 2MVUA 2FADA 2EHTA 2N50A 2FQ2A 2FHSC 5CZDB 2KR5A 2L9FA 2ROQA 4H2XC 2XZ0D 2N98A 2MR7A 2KOPA 2VSQA 2LMLA 2N5HA 2DNWA 1NQ4A 4BPHA 1OR5A 2MR8A 1HQBA 2KGDA 2MD9A 5HVCA 2L4BA 2FAEA 2X2BA 2FACA 2JQ4A 2K94A 2KWLA 2MVVA 4MRTC 2MY5A 2PNGA 2AVAA 2XZ1C 3CE7A 2MF4A 2QNWA 2K92A 1F80D 2EHSA 2LTEA 2N6ZA 2CNRA 4BPFA 2KORA 2JU2A 2L22A 2K0XA 4PXHB 2FVAA 5KP7B 1ACPA 2K0YA 2LIUA 3RG2A 4IZ6A 4BPGA 2AFEA 2CG5B 2KGCA 2L0QA 2FQ0A 1HY8A 2KGEA 5EJDA 2M5RA 5KP6B 2KW2A 5HV8A 4R0MA 3LMOA 2GDYA 2KG8A 1L0HA 2K2QA 2KG6A 2LL8A 3GZLA 3EJEA 2KOQA 2LOLA 3EJBA 2KG9A 2K93A 4CA3A 4DG9A 4H2YC 1T8KA 2LPKA 1KLPA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1AF8 A;  2LIW A;  2KOS A;  1VKU A;  1DV5 A;  4HKG A;  2KGA A;  2JGP A;  1X3O A;  2LKI A;  3EJD A;  2FVF A;  4PWV B;  2GDW A;  4H2W C;  2CGQ A;  5KP8 B;  3NY7 B;  2N6Y A;  2AF8 A;  2KOO A;  2GDX A;  3GZM A;  2N5I A;  4NEO A;  1DNY A;  2AFD A;  2FVE A;  1L0I A;  2CQ8 A;  2JU1 A;  2FQ1 A;  2MVU A;  2FAD A;  2EHT A;  2N50 A;  2FQ2 A;  2FHS C;  5CZD B;  2KR5 A;  2L9F A;  2ROQ A;  4H2X C;  2XZ0 D;  2N98 A;  2MR7 A;  2KOP A;  2VSQ A;  2LML A;  2N5H A;  2DNW A;  1NQ4 A;  4BPH A;  1OR5 A;  2MR8 A;  1HQB A;  2KGD A;  2MD9 A;  5HVC A;  2L4B A;  2FAE A;  2X2B A;  2FAC A;  2JQ4 A;  2K94 A;  2KWL A;  2MVV A;  4MRT C;  2MY5 A;  2PNG A;  2AVA A;  2XZ1 C;  3CE7 A;  2MF4 A;  2QNW A;  2K92 A;  1F80 D;  2EHS A;  2LTE A;  2N6Z A;  2CNR A;  4BPF A;  2KOR A;  2JU2 A;  2L22 A;  2K0X A;  4PXH B;  2FVA A;  5KP7 B;  1ACP A;  2K0Y A;  2LIU A;  3RG2 A;  4IZ6 A;  4BPG A;  2AFE A;  2CG5 B;  2KGC A;  2L0Q A;  2FQ0 A;  1HY8 A;  2KGE A;  5EJD A;  2M5R A;  5KP6 B;  2KW2 A;  5HV8 A;  4R0M A;  3LMO A;  2GDY A;  2KG8 A;  1L0H A;  2K2Q A;  2KG6 A;  2LL8 A;  3GZL A;  3EJE A;  2KOQ A;  2LOL A;  3EJB A;  2KG9 A;  2K93 A;  4CA3 A;  4DG9 A;  4H2Y C;  1T8K A;  2LPK A;  1KLP A; 
#chains in the Genus database with same CATH topology
 2PEO A;  4HKG A;  2JGP A;  1KQS O;  3CCM P;  1QRJ A;  2M8L A;  4H2W C;  2NO8 A;  5KP8 B;  3NY7 B;  3CMA P;  1VQP P;  3M1M A;  1GXG A;  5DCK A;  3GZM A;  1DNY A;  4NEO A;  2FVE A;  1VQO P;  3CC7 P;  1M90 Q;  1RNI A;  2EIA A;  2QA4 P;  2ROQ A;  4XRO A;  1K8A Q;  2N98 A;  4IPY A;  1VQL P;  4U0C A;  2N5H A;  2BUO A;  2KGD A;  3CCS P;  2OTL P;  3CCV P;  3CCL P;  2JB0 A;  2PEI A;  4U0E A;  1EIA A;  3G1G A;  1UJZ A;  2FAC A;  2K94 A;  2MVV A;  4MRT C;  2MY5 A;  2PNG A;  2XZ1 C;  2JO0 A;  5EW5 E;  3NTE A;  2M8P A;  4QKO A;  2JU2 A;  2OTJ P;  5KP7 B;  4BPG A;  2AFE A;  2GZE A;  1YJW P;  3CPW O;  2XT1 A;  2KGE A;  1YIJ P;  2KW2 A;  1M74 A;  3P05 A;  5HGL A;  1IMP A;  4U0B A;  2K2Q A;  3GZL A;  3G26 A;  2KOQ A;  1M1K Q;  1VQ6 P;  4U0F A;  2K93 A;  4CA3 A;  2OAR A;  1VQ9 P;  2WPT A;  2LPK A;  1Q7Y Q;  1M6N A;  1AF8 A;  2PEQ A;  2LIW A;  2KOS A;  3G29 A;  1X3O A;  3G4S P;  3DS3 A;  2N6Y A;  3DPH A;  3DTJ A;  4GR6 A;  3I56 P;  2AFD A;  2Z45 A;  2CQ8 A;  2JU1 A;  2MVU A;  2EHT A;  2BHV A;  2N50 A;  3CCU P;  2FQ2 A;  2KOD A;  2FHS C;  1E6J P;  3H47 A;  5CZD B;  1JJ2 O;  2L9F A;  2XZ0 D;  5BS1 A;  3CCR P;  2VLQ A;  2CWO A;  2VSQ A;  2LML A;  1YJ9 P;  1AYI A;  2L4B A;  2FAE A;  2X2B A;  1M6E X;  3Q20 A;  1YJN P;  2PY8 A;  2JQ4 A;  1AUM A;  2XXM A;  3E2D A;  4QNB A;  5F2K A;  4PH0 A;  2GZF A;  2P9X A;  2K92 A;  2GZI A;  1YIT P;  4WYM A;  2GZJ A;  3WBH A;  3OW2 O;  3DS0 A;  1GPJ A;  4BPF A;  2KOR A;  2L22 A;  1Q86 Q;  1VQK P;  4PXH B;  2FVA A;  2K0Y A;  2LIU A;  1QVG O;  2KGC A;  1MZ8 A;  1VQ5 P;  2FQ0 A;  3CD6 P;  5EJD A;  2VLP A;  3G6E P;  1Q82 Q;  4M0I A;  2Z44 A;  1EOQ A;  2KG8 A;  1A8O A;  2DGY A;  1E0H A;  1ZMB A;  5BS2 A;  2LL8 A;  3B4Q A;  1N8R Q;  3EJB A;  1Z6M A;  2M8N A;  1VQ7 P;  1VQN P;  2E1M A;  2Z46 A;  2KGA A;  3H0D A;  1KD1 Q;  3EJD A;  2FVF A;  4PWV B;  2GDW A;  3G71 P;  4F37 A;  2GZG A;  2AF8 A;  2EG5 A;  3HZQ A;  3CCQ P;  2N5I A;  1VQ4 P;  3HYB A;  3G0V A;  2KR5 A;  2ONT A;  1FR2 A;  3CCJ P;  2JYG A;  2MR7 A;  2XV6 A;  2DNW A;  1NQ4 A;  4XFY A;  2MR8 A;  5HGO A;  4PH1 A;  3RG6 C;  1VQM P;  5HVC A;  1K30 A;  4XFZ A;  1IUQ A;  3CE7 A;  1QVF O;  5JPA A;  2QNW A;  2VLO A;  2PEN A;  1GXH A;  4GR2 A;  1YI2 P;  1NJI Q;  2N6Z A;  2CNR A;  1CEI A;  1D1D A;  2K0X A;  2CG5 B;  3CCE P;  2L0Q A;  4U0A A;  3CME P;  1Q81 Q;  4XRQ A;  2JAZ A;  2M5R A;  3DS2 A;  4U0D A;  2GDY A;  2GYK A;  1L0H A;  1K9M Q;  3GKL C;  5F2N A;  3G28 A;  1BXI A;  2LF4 A;  4H2Y C;  3B5I A;  1T8K A;  2PEK A;  7CEI A;  1S72 P;  1KLP A;  1VKU A;  1DV5 A;  2PEJ A;  1RO0 A;  3DS5 A;  4COC A;  2LKI A;  1W2B O;  2CGQ A;  3G1I A;  1A43 A;  2KOO A;  2GDX A;  2K5X A;  1L0I A;  3G21 A;  2FQ1 A;  3GJN A;  5HGM A;  2FAD A;  3DS4 A;  3CXC O;  1IMQ A;  4H2X C;  5HGN A;  2KOP A;  3LRY A;  4BPH A;  1OR5 A;  1HQB A;  1UNK A;  2JYL A;  2MD9 A;  5I4T G;  2KWL A;  2AVA A;  2ERH A;  3DS1 A;  2MF4 A;  1F80 D;  2EHS A;  2K0D X;  2LTE A;  3CC4 P;  3CC2 P;  2L6E A;  1ACP A;  3RG2 A;  4IZ6 A;  3U43 A;  3H4E A;  1KC8 Q;  2QEX P;  1VQ8 P;  1HY8 A;  1ZNV A;  2EFJ A;  1RO2 A;  5KP6 B;  1EMV A;  1BAJ A;  5HV8 A;  4R0M A;  3LMO A;  2JBG A;  2KG6 A;  1K73 Q;  1YHQ P;  5F2O A;  4XFX A;  3EJE A;  2LOL A;  3VRL C;  3MGE A;  2KG9 A;  1VHN A;  4COP A;  4DG9 A;  3I55 P;  2VLN A;  4UHP B;  2PEM A; 
#chains in the Genus database with same CATH homology
 1AF8 A;  2LIW A;  2KOS A;  1VKU A;  1DV5 A;  4HKG A;  2KGA A;  2JGP A;  1X3O A;  2LKI A;  3EJD A;  2FVF A;  4PWV B;  2GDW A;  4H2W C;  2CGQ A;  5KP8 B;  3NY7 B;  2N6Y A;  2AF8 A;  2KOO A;  2GDX A;  3GZM A;  2N5I A;  4NEO A;  1DNY A;  2AFD A;  2FVE A;  1L0I A;  2CQ8 A;  2JU1 A;  2FQ1 A;  2MVU A;  2FAD A;  2EHT A;  2N50 A;  2FQ2 A;  2FHS C;  5CZD B;  2KR5 A;  2L9F A;  2ROQ A;  4H2X C;  2XZ0 D;  2N98 A;  2MR7 A;  2KOP A;  2VSQ A;  2LML A;  2N5H A;  2DNW A;  1NQ4 A;  4BPH A;  1OR5 A;  2MR8 A;  1HQB A;  2KGD A;  2MD9 A;  5HVC A;  2L4B A;  2FAE A;  2X2B A;  2FAC A;  2JQ4 A;  2K94 A;  2KWL A;  2MVV A;  4MRT C;  2MY5 A;  2PNG A;  2AVA A;  2XZ1 C;  3CE7 A;  2MF4 A;  2QNW A;  2K92 A;  1F80 D;  2EHS A;  2LTE A;  2N6Z A;  2CNR A;  4BPF A;  2KOR A;  2JU2 A;  2L22 A;  2K0X A;  4PXH B;  2FVA A;  5KP7 B;  1ACP A;  2K0Y A;  2LIU A;  3RG2 A;  4IZ6 A;  4BPG A;  2AFE A;  2CG5 B;  2KGC A;  2L0Q A;  2FQ0 A;  1HY8 A;  2KGE A;  5EJD A;  2M5R A;  5KP6 B;  2KW2 A;  5HV8 A;  4R0M A;  3LMO A;  2GDY A;  2KG8 A;  1L0H A;  2K2Q A;  2KG6 A;  2LL8 A;  3GZL A;  3EJE A;  2KOQ A;  2LOL A;  3EJB A;  2KG9 A;  2K93 A;  4CA3 A;  4DG9 A;  4H2Y C;  1T8K A;  2LPK A;  1KLP A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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