2JU2A

Minimized mean solution structure of the acyl carrier protein domain from module 2 of 6-deoxyerythronolide b synthase (debs)
Total Genus 22
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
22
sequence length
95
structure length
95
Chain Sequence
GSHMLRDRLAGLPRAERTAELVRLVRTSTATVLGHDDPKAVRATTPFKELGFDSLAAVRLRNLLNAATGLRLPSTLVFDHPNASAVAGFLDAELG
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Transferase
molecule keywords Erythronolide synthase
publication title Solution structure and proposed domain domain recognition interface of an acyl carrier protein domain from a modular polyketide synthase.
pubmed doi rcsb
source organism Saccharopolyspora erythraea
total genus 22
structure length 95
sequence length 95
ec nomenclature ec 2.3.1.94: 6-deoxyerythronolide-B synthase.
pdb deposition date 2007-08-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2ju2A00
3GZMA 2EHTA 3EJEA 2LL8A 2KORA 3EJDA 2KOPA 4H2XC 2LMLA 2EHSA 2GDYA 4MRTC 1HY8A 2N5IA 3NY7B 4NEOA 4HKGA 2JGPA 4DG9A 1L0IA 2AFDA 2PNGA 2FADA 4BPFA 2CNRA 2JQ4A 5EJDA 2K0YA 2KR5A 5HVCA 3LMOA 2N98A 1DNYA 2MF4A 2CQ8A 2MD9A 2KGAA 3EJBA 1OR5A 3GZLA 2KG8A 4CA3A 2KGDA 2FVAA 2N6ZA 2KG6A 1L0HA 2LPKA 2MVUA 2AFEA 3CE7A 2N6YA 1HQBA 2XZ1C 2LIUA 4BPHA 2MY5A 4H2WC 5KP7B 2JU2A 2L4BA 1ACPA 2AVAA 2KOSA 2QNWA 2K93A 2FVEA 4PWVB 2JU1A 1NQ4A 2KWLA 5KP8B 2FAEA 2L0QA 2KGEA 3RG2A 2MR8A 2FHSC 5CZDB 2N5HA 4R0MA 4PXHB 2L9FA 5KP6B 2XZ0D 5HV8A 4IZ6A 2AF8A 2MVVA 2DNWA 1F80D 2K92A 2K94A 2FQ0A 2KG9A 2MR7A 4BPGA 2LOLA 2N50A 2X2BA 1T8KA 1X3OA 2CGQA 2LTEA 2ROQA 2GDXA 2K0XA 2FVFA 2KW2A 2LKIA 1VKUA 1DV5A 2FACA 2FQ2A 2LIWA 2CG5B 2VSQA 2GDWA 2KOQA 1AF8A 2L22A 1KLPA 4H2YC 2K2QA 2M5RA 2KGCA 2FQ1A 2KOOA
chains in the Genus database with same CATH superfamily
1AYIA 2WPTA 5F2NA 2JO0A 5F2OA 2EHTA 2GZJA 2LL8A 2LMLA 5BS2A 3CCUP 4HKGA 2JGPA 2PNGA 2GZGA 3NTEA 2XV6A 5EJDA 2OTLP 2KR5A 5HVCA 3B5IA 3DPHA 1K73Q 1M1KQ 3GZLA 5HGNA 1YJ9P 1MZ8A 3GJNA 2KG6A 1L0HA 2VLQA 3CE7A 2N6YA 1HQBA 3G0VA 2MY5A 3CMAP 3CCEP 3CC4P 2KOSA 2QNWA 2PY8A 2FVEA 4PWVB 2NO8A 1NQ4A 2QEXP 1YI2P 1JJ2O 3CC2P 1GXGA 1Q7YQ 2N5HA 4R0MA 2XZ0D 1K9MQ 5HV8A 2M8LA 1VQKP 2DNWA 4U0BA 4F37A 4U0FA 2Z44A 3CCRP 2OARA 2PEMA 1M6NA 2DGYA 1S72P 1QRJA 2FVFA 1RO0A 2FQ2A 1M90Q 1ZNVA 1VQ8P 3CC7P 4XROA 3H4EA 2L6EA 2KGCA 1Q81Q 2FQ1A 3GZMA 2BHVA 1QVGO 3CCQP 1RNIA 2E1MA 3VRLC 3G29A 3LRYA 2JBGA 2KOPA 2EHSA 1BXIA 2GDYA 1HY8A 5HGLA 3NY7B 3I55P 1K8AQ 1L0IA 2AFDA 2VLNA 2FADA 1W2BO 2CNRA 2JQ4A 4COPA 5JPAA 3LMOA 3G6EP 1NJIQ 1DNYA 3DS1A 2P9XA 2ONTA 1OR5A 3MGEA 2JYGA 3Q20A 2GZEA 2MVUA 2LPKA 4BPHA 3B4QA 3CMEP 3CXCO 1ACPA 2AVAA 4COCA 4GR2A 4XFXA 1VHNA 2JU1A 3H47A 2K5XA 5KP8B 2FAEA 3G1GA 3CD6P 4PXHB 2XT1A 3CCSP 2L9FA 4XRQA 5KP6B 3DS3A 4PH1A 2MVVA 2PEKA 1A43A 2PEIA 2XXMA 4BPGA 4XFYA 3CCLP 2LOLA 3GKLC 2N50A 3U43A 2PEJA 2CGQA 2LTEA 1EOQA 2K0DX 2GYKA 2K0XA 2KODA 2KW2A 2LKIA 4U0DA 5HGMA 3G4SP 1GPJA 1N8RQ 2Z45A 1VQ4P 2GDWA 2KOQA 1QVFO 2JAZA 2L22A 4H2YC 2K2QA 2M5RA 3G28A 1IUQA 2KORA 3EJDA 3RG6C 2EIAA 1VQMP 1Z6MA 3G26A 1A8OA 4U0CA 5BS1A 4BPFA 2K0YA 1UNKA 2N98A 2MF4A 3EJBA 1IMPA 2KG8A 3G1IA 1VQ5P 1VQ7P 3HZQA 2N6ZA 2AFEA 1GXHA 1D1DA 2L4BA 2VLOA 3DS5A 2QA4P 5DCKA 1BAJA 2KWLA 3WBHA 1KD1Q 2KGEA 3HYBA 2MR8A 7CEIA 2FHSC 1KQSO 5CZDB 2JYLA 1AUMA 3E2DA 1YITP 1E0HA 1YIJP 4IPYA 4PH0A 1M6EX 2K92A 2KG9A 2MR7A 1VQ6P 1YHQP 4GR6A 5F2KA 1Q86Q 2X2BA 1M74A 2PEQA 1X3OA 1YJWP 2GDXA 4QNBA 3CPWO 4U0EA 1KC8Q 2EFJA 4U0AA 1IMQA 1VKUA 1DV5A 2FACA 2LIWA 2VSQA 2ERHA 1KLPA 5I4TG 2PENA 3G21A 1VQPP 4WYMA 3EJEA 1VQNP 4H2XC 1E6JP 2CWOA 4MRTC 2N5IA 5HGOA 1Q82Q 4NEOA 4DG9A 1VQOP 2M8PA 2CQ8A 2MD9A 2KGAA 3M1MA 1K30A 3H0DA 3I56P 3G71P 1UJZA 4CA3A 2KGDA 2FVAA 2XZ1C 2LIUA 3P05A 1YJNP 4H2WC 5KP7B 2Z46A 2JU2A 2OTJP 1EMVA 1VQ9P 2K93A 4XFZA 2GZFA 3DS0A 2BUOA 3CCJP 2L0QA 3RG2A 2LF4A 2GZIA 1EIAA 3DTJA 3DS4A 3DS2A 2EG5A 4IZ6A 4UHPB 2AF8A 2PEOA 1ZMBA 1F80D 2K94A 2FQ0A 1FR2A 4M0IA 1T8KA 2M8NA 2ROQA 3OW2O 2VLPA 3CCMP 3CCVP 5EW5E 1VQLP 2CG5B 1AF8A 1CEIA 2JB0A 4QKOA 1RO2A 2KOOA
chains in the Genus database with same CATH topology
3GZMA 2EHTA 3EJEA 2LL8A 2KORA 3EJDA 2KOPA 4H2XC 2LMLA 2EHSA 2GDYA 4MRTC 1HY8A 2N5IA 3NY7B 4NEOA 4HKGA 2JGPA 4DG9A 1L0IA 2AFDA 2PNGA 2FADA 4BPFA 2CNRA 2JQ4A 5EJDA 2K0YA 2KR5A 5HVCA 3LMOA 2N98A 1DNYA 2MF4A 2CQ8A 2MD9A 2KGAA 3EJBA 1OR5A 3GZLA 2KG8A 4CA3A 2KGDA 2FVAA 2N6ZA 2KG6A 1L0HA 2LPKA 2MVUA 2AFEA 3CE7A 2N6YA 1HQBA 2XZ1C 2LIUA 4BPHA 2MY5A 4H2WC 5KP7B 2JU2A 2L4BA 1ACPA 2AVAA 2KOSA 2QNWA 2K93A 2FVEA 4PWVB 2JU1A 1NQ4A 2KWLA 5KP8B 2FAEA 2L0QA 2KGEA 3RG2A 2MR8A 2FHSC 5CZDB 2N5HA 4R0MA 4PXHB 2L9FA 5KP6B 2XZ0D 5HV8A 4IZ6A 2AF8A 2MVVA 2DNWA 1F80D 2K92A 2K94A 2FQ0A 2KG9A 2MR7A 4BPGA 2LOLA 2N50A 2X2BA 1T8KA 1X3OA 2CGQA 2LTEA 2ROQA 2GDXA 2K0XA 2FVFA 2KW2A 2LKIA 1VKUA 1DV5A 2FACA 2FQ2A 2LIWA 2CG5B 2VSQA 2GDWA 2KOQA 1AF8A 2L22A 1KLPA 4H2YC 2K2QA 2M5RA 2KGCA 2FQ1A 2KOOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3GZM A;  2EHT A;  3EJE A;  2LL8 A;  2KOR A;  3EJD A;  2KOP A;  4H2X C;  2LML A;  2EHS A;  2GDY A;  4MRT C;  1HY8 A;  2N5I A;  3NY7 B;  4NEO A;  4HKG A;  2JGP A;  4DG9 A;  1L0I A;  2AFD A;  2PNG A;  2FAD A;  4BPF A;  2CNR A;  2JQ4 A;  5EJD A;  2K0Y A;  2KR5 A;  5HVC A;  3LMO A;  2N98 A;  1DNY A;  2MF4 A;  2CQ8 A;  2MD9 A;  2KGA A;  3EJB A;  1OR5 A;  3GZL A;  2KG8 A;  4CA3 A;  2KGD A;  2FVA A;  2N6Z A;  2KG6 A;  1L0H A;  2LPK A;  2MVU A;  2AFE A;  3CE7 A;  2N6Y A;  1HQB A;  2XZ1 C;  2LIU A;  4BPH A;  2MY5 A;  4H2W C;  5KP7 B;  2JU2 A;  2L4B A;  1ACP A;  2AVA A;  2KOS A;  2QNW A;  2K93 A;  2FVE A;  4PWV B;  2JU1 A;  1NQ4 A;  2KWL A;  5KP8 B;  2FAE A;  2L0Q A;  2KGE A;  3RG2 A;  2MR8 A;  2FHS C;  5CZD B;  2N5H A;  4R0M A;  4PXH B;  2L9F A;  5KP6 B;  2XZ0 D;  5HV8 A;  4IZ6 A;  2AF8 A;  2MVV A;  2DNW A;  1F80 D;  2K92 A;  2K94 A;  2FQ0 A;  2KG9 A;  2MR7 A;  4BPG A;  2LOL A;  2N50 A;  2X2B A;  1T8K A;  1X3O A;  2CGQ A;  2LTE A;  2ROQ A;  2GDX A;  2K0X A;  2FVF A;  2KW2 A;  2LKI A;  1VKU A;  1DV5 A;  2FAC A;  2FQ2 A;  2LIW A;  2CG5 B;  2VSQ A;  2GDW A;  2KOQ A;  1AF8 A;  2L22 A;  1KLP A;  4H2Y C;  2K2Q A;  2M5R A;  2KGC A;  2FQ1 A;  2KOO A; 
#chains in the Genus database with same CATH topology
 1AYI A;  2WPT A;  5F2N A;  2JO0 A;  5F2O A;  2EHT A;  2GZJ A;  2LL8 A;  2LML A;  5BS2 A;  3CCU P;  4HKG A;  2JGP A;  2PNG A;  2GZG A;  3NTE A;  2XV6 A;  5EJD A;  2OTL P;  2KR5 A;  5HVC A;  3B5I A;  3DPH A;  1K73 Q;  1M1K Q;  3GZL A;  5HGN A;  1YJ9 P;  1MZ8 A;  3GJN A;  2KG6 A;  1L0H A;  2VLQ A;  3CE7 A;  2N6Y A;  1HQB A;  3G0V A;  2MY5 A;  3CMA P;  3CCE P;  3CC4 P;  2KOS A;  2QNW A;  2PY8 A;  2FVE A;  4PWV B;  2NO8 A;  1NQ4 A;  2QEX P;  1YI2 P;  1JJ2 O;  3CC2 P;  1GXG A;  1Q7Y Q;  2N5H A;  4R0M A;  2XZ0 D;  1K9M Q;  5HV8 A;  2M8L A;  1VQK P;  2DNW A;  4U0B A;  4F37 A;  4U0F A;  2Z44 A;  3CCR P;  2OAR A;  2PEM A;  1M6N A;  2DGY A;  1S72 P;  1QRJ A;  2FVF A;  1RO0 A;  2FQ2 A;  1M90 Q;  1ZNV A;  1VQ8 P;  3CC7 P;  4XRO A;  3H4E A;  2L6E A;  2KGC A;  1Q81 Q;  2FQ1 A;  3GZM A;  2BHV A;  1QVG O;  3CCQ P;  1RNI A;  2E1M A;  3VRL C;  3G29 A;  3LRY A;  2JBG A;  2KOP A;  2EHS A;  1BXI A;  2GDY A;  1HY8 A;  5HGL A;  3NY7 B;  3I55 P;  1K8A Q;  1L0I A;  2AFD A;  2VLN A;  2FAD A;  1W2B O;  2CNR A;  2JQ4 A;  4COP A;  5JPA A;  3LMO A;  3G6E P;  1NJI Q;  1DNY A;  3DS1 A;  2P9X A;  2ONT A;  1OR5 A;  3MGE A;  2JYG A;  3Q20 A;  2GZE A;  2MVU A;  2LPK A;  4BPH A;  3B4Q A;  3CME P;  3CXC O;  1ACP A;  2AVA A;  4COC A;  4GR2 A;  4XFX A;  1VHN A;  2JU1 A;  3H47 A;  2K5X A;  5KP8 B;  2FAE A;  3G1G A;  3CD6 P;  4PXH B;  2XT1 A;  3CCS P;  2L9F A;  4XRQ A;  5KP6 B;  3DS3 A;  4PH1 A;  2MVV A;  2PEK A;  1A43 A;  2PEI A;  2XXM A;  4BPG A;  4XFY A;  3CCL P;  2LOL A;  3GKL C;  2N50 A;  3U43 A;  2PEJ A;  2CGQ A;  2LTE A;  1EOQ A;  2K0D X;  2GYK A;  2K0X A;  2KOD A;  2KW2 A;  2LKI A;  4U0D A;  5HGM A;  3G4S P;  1GPJ A;  1N8R Q;  2Z45 A;  1VQ4 P;  2GDW A;  2KOQ A;  1QVF O;  2JAZ A;  2L22 A;  4H2Y C;  2K2Q A;  2M5R A;  3G28 A;  1IUQ A;  2KOR A;  3EJD A;  3RG6 C;  2EIA A;  1VQM P;  1Z6M A;  3G26 A;  1A8O A;  4U0C A;  5BS1 A;  4BPF A;  2K0Y A;  1UNK A;  2N98 A;  2MF4 A;  3EJB A;  1IMP A;  2KG8 A;  3G1I A;  1VQ5 P;  1VQ7 P;  3HZQ A;  2N6Z A;  2AFE A;  1GXH A;  1D1D A;  2L4B A;  2VLO A;  3DS5 A;  2QA4 P;  5DCK A;  1BAJ A;  2KWL A;  3WBH A;  1KD1 Q;  2KGE A;  3HYB A;  2MR8 A;  7CEI A;  2FHS C;  1KQS O;  5CZD B;  2JYL A;  1AUM A;  3E2D A;  1YIT P;  1E0H A;  1YIJ P;  4IPY A;  4PH0 A;  1M6E X;  2K92 A;  2KG9 A;  2MR7 A;  1VQ6 P;  1YHQ P;  4GR6 A;  5F2K A;  1Q86 Q;  2X2B A;  1M74 A;  2PEQ A;  1X3O A;  1YJW P;  2GDX A;  4QNB A;  3CPW O;  4U0E A;  1KC8 Q;  2EFJ A;  4U0A A;  1IMQ A;  1VKU A;  1DV5 A;  2FAC A;  2LIW A;  2VSQ A;  2ERH A;  1KLP A;  5I4T G;  2PEN A;  3G21 A;  1VQP P;  4WYM A;  3EJE A;  1VQN P;  4H2X C;  1E6J P;  2CWO A;  4MRT C;  2N5I A;  5HGO A;  1Q82 Q;  4NEO A;  4DG9 A;  1VQO P;  2M8P A;  2CQ8 A;  2MD9 A;  2KGA A;  3M1M A;  1K30 A;  3H0D A;  3I56 P;  3G71 P;  1UJZ A;  4CA3 A;  2KGD A;  2FVA A;  2XZ1 C;  2LIU A;  3P05 A;  1YJN P;  4H2W C;  5KP7 B;  2Z46 A;  2JU2 A;  2OTJ P;  1EMV A;  1VQ9 P;  2K93 A;  4XFZ A;  2GZF A;  3DS0 A;  2BUO A;  3CCJ P;  2L0Q A;  3RG2 A;  2LF4 A;  2GZI A;  1EIA A;  3DTJ A;  3DS4 A;  3DS2 A;  2EG5 A;  4IZ6 A;  4UHP B;  2AF8 A;  2PEO A;  1ZMB A;  1F80 D;  2K94 A;  2FQ0 A;  1FR2 A;  4M0I A;  1T8K A;  2M8N A;  2ROQ A;  3OW2 O;  2VLP A;  3CCM P;  3CCV P;  5EW5 E;  1VQL P;  2CG5 B;  1AF8 A;  1CEI A;  2JB0 A;  4QKO A;  1RO2 A;  2KOO A; 
#chains in the Genus database with same CATH homology
 3GZM A;  2EHT A;  3EJE A;  2LL8 A;  2KOR A;  3EJD A;  2KOP A;  4H2X C;  2LML A;  2EHS A;  2GDY A;  4MRT C;  1HY8 A;  2N5I A;  3NY7 B;  4NEO A;  4HKG A;  2JGP A;  4DG9 A;  1L0I A;  2AFD A;  2PNG A;  2FAD A;  4BPF A;  2CNR A;  2JQ4 A;  5EJD A;  2K0Y A;  2KR5 A;  5HVC A;  3LMO A;  2N98 A;  1DNY A;  2MF4 A;  2CQ8 A;  2MD9 A;  2KGA A;  3EJB A;  1OR5 A;  3GZL A;  2KG8 A;  4CA3 A;  2KGD A;  2FVA A;  2N6Z A;  2KG6 A;  1L0H A;  2LPK A;  2MVU A;  2AFE A;  3CE7 A;  2N6Y A;  1HQB A;  2XZ1 C;  2LIU A;  4BPH A;  2MY5 A;  4H2W C;  5KP7 B;  2JU2 A;  2L4B A;  1ACP A;  2AVA A;  2KOS A;  2QNW A;  2K93 A;  2FVE A;  4PWV B;  2JU1 A;  1NQ4 A;  2KWL A;  5KP8 B;  2FAE A;  2L0Q A;  2KGE A;  3RG2 A;  2MR8 A;  2FHS C;  5CZD B;  2N5H A;  4R0M A;  4PXH B;  2L9F A;  5KP6 B;  2XZ0 D;  5HV8 A;  4IZ6 A;  2AF8 A;  2MVV A;  2DNW A;  1F80 D;  2K92 A;  2K94 A;  2FQ0 A;  2KG9 A;  2MR7 A;  4BPG A;  2LOL A;  2N50 A;  2X2B A;  1T8K A;  1X3O A;  2CGQ A;  2LTE A;  2ROQ A;  2GDX A;  2K0X A;  2FVF A;  2KW2 A;  2LKI A;  1VKU A;  1DV5 A;  2FAC A;  2FQ2 A;  2LIW A;  2CG5 B;  2VSQ A;  2GDW A;  2KOQ A;  1AF8 A;  2L22 A;  1KLP A;  4H2Y C;  2K2Q A;  2M5R A;  2KGC A;  2FQ1 A;  2KOO A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...