5HV8A

Solution structure of an octanoyl- loaded acyl carrier protein domain from module mlsa2 of the mycolactone polyketide synthase.
Total Genus 26
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
26
sequence length
95
structure length
95
Chain Sequence
GSHMRLNGLSPQQQQQTLATLVAAATATVLGHHTPESISPATAFKDLGIDSLTALELRNTLTHNTGLDLPPTLIFDHPTPHALTQHLHTRLTQSH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
source organism Mycobacterium ulcerans
publication title Sticky swinging arm dynamics: studies of an acyl carrier protein domain from the mycolactone polyketide synthase.
pubmed doi rcsb
molecule keywords Type I modular polyketide synthase
total genus 26
structure length 95
sequence length 95
ec nomenclature
pdb deposition date 2016-01-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 5hv8A00
2GDYA 2K0XA 4MRTC 3EJDA 1DV5A 2MVUA 2L0QA 2PNGA 2FVEA 1X3OA 3EJEA 3EJBA 4HKGA 2L4BA 4NEOA 2FAEA 2MF4A 2FACA 2N5IA 2L22A 2MD9A 2AFDA 5KP8B 5EJDA 2AVAA 4BPHA 4IZ6A 1HQBA 2KG9A 1F80D 2KG8A 2CQ8A 2MVVA 2M5RA 2MY5A 1KLPA 2KOSA 2LPKA 2XZ0D 2GDXA 5KP7B 4BPGA 1VKUA 2FVAA 1ACPA 2GDWA 2LOLA 2K0YA 5HVCA 2EHSA 2JU2A 2QNWA 2LIWA 4CA3A 2K93A 2LTEA 2KG6A 4BPFA 2CG5B 2FVFA 2KORA 2MR8A 1HY8A 1L0IA 1L0HA 2MR7A 2AF8A 2K2QA 2KGEA 1AF8A 1DNYA 2JU1A 2EHTA 2KOQA 2N98A 2FQ1A 5HV8A 2L9FA 1OR5A 2KGDA 2CGQA 1NQ4A 1T8KA 2LL8A 3RG2A 5CZDB 2VSQA 2N50A 4DG9A 2X2BA 3GZLA 2FHSC 2AFEA 4H2XC 2LKIA 3GZMA 2N6ZA 2JQ4A 3LMOA 4PXHB 2XZ1C 4H2WC 2K94A 2FADA 4H2YC 2FQ0A 2K92A 3CE7A 4PWVB 2FQ2A 2KGCA 2DNWA 2LMLA 2N6YA 5KP6B 2KR5A 2N5HA 2JGPA 4R0MA 2CNRA 2KW2A 2LIUA 2KOPA 2KWLA 3NY7B 2ROQA 2KOOA 2KGAA
chains in the Genus database with same CATH superfamily
1YITP 2JB0A 4M0IA 2JBGA 3CMEP 2ERHA 2PNGA 2K0DX 1Z6MA 3CCSP 1E0HA 2N5IA 2L22A 1MZ8A 3G6EP 2M8LA 1IMQA 4COCA 1VQLP 1VQPP 2XT1A 1A43A 4BPHA 2QEXP 2KG8A 2E1MA 4QKOA 1M6NA 4XROA 1VQNP 1NJIQ 2XZ0D 5BS2A 1Q81Q 1Q86Q 1UNKA 2FVAA 1ACPA 2GDWA 3I55P 2LOLA 1RO2A 3G29A 1VQOP 1M6EX 2JYLA 2LIWA 4BPFA 4IPYA 4GR6A 1HY8A 1L0IA 2AF8A 2KGEA 5JPAA 1YJNP 2KGDA 2CGQA 1NQ4A 3DS5A 1N8RQ 3DPHA 2PEOA 5CZDB 3CCMP 4U0DA 1S72P 4DG9A 2OTLP 3GZLA 2AFEA 1JJ2O 2JQ4A 3CPWO 1ZNVA 4H2WC 3DS2A 2FQ0A 3CE7A 4GR2A 2LMLA 3NTEA 5KP6B 2N5HA 1VQKP 2JGPA 1M74A 2ONTA 3LRYA 5I4TG 4U0EA 1VQ8P 2KGAA 2K0XA 3CC7P 3DS0A 3G71P 1EIAA 1Q82Q 3E2DA 2FVEA 1X3OA 4PH0A 5HGOA 3G28A 3CCRP 3CCJP 3CMAP 2PEMA 3H47A 3CCVP 5EJDA 3G26A 5HGNA 2Z45A 4IZ6A 3RG6C 1F80D 2MY5A 2KOSA 3DS1A 5KP7B 2PEQA 2Z44A 1VKUA 2GZEA 2K0YA 2PEKA 2GZJA 3GKLC 1VQ4P 1QRJA 2CWOA 1AF8A 2KOQA 1YJWP 1OR5A 2LL8A 2VLPA 3DS3A 3RG2A 1KC8Q 1A8OA 2VSQA 1KD1Q 3G4SP 4H2XC 3GZMA 3B4QA 3G1GA 2N6ZA 1QVFO 1IMPA 2K94A 1BXIA 2FADA 3VRLC 2K92A 3DS4A 2DNWA 2N6YA 2KR5A 4R0MA 2KOPA 2PEIA 5EW5E 2BHVA 2GDYA 3MGEA 3OW2O 3P05A 3EJDA 1DV5A 2XV6A 1YJ9P 2MVUA 1ZMBA 2OTJP 3EJEA 3EJBA 1M1KQ 2L4BA 1VQ6P 2FACA 1GXGA 2Z46A 2AFDA 2EIAA 3CD6P 2GZGA 2PY8A 1HQBA 2KG9A 1KLPA 3G0VA 2GDXA 1K73Q 2P9XA 5HVCA 1K30A 2JU2A 3H0DA 3WBHA 5BS1A 1RNIA 4XFZA 2CG5B 4QNBA 2MR8A 2K5XA 1RO0A 2K2QA 1VHNA 1DNYA 2JU1A 1K9MQ 1KQSO 2N98A 5HV8A 1CEIA 5F2NA 1T8KA 1YIJP 3I56P 2XXMA 2PEJA 2JYGA 4U0CA 2N50A 2X2BA 1EMVA 7CEIA 2LKIA 2M8PA 3LMOA 4PH1A 3CCEP 3H4EA 1IUQA 3HYBA 3G21A 3CCQP 5HGMA 4U0AA 2GZIA 2LIUA 2KWLA 3B5IA 3CC2P 1VQ7P 2KOOA 5F2OA 2WPTA 1BAJA 5DCKA 2EG5A 2BUOA 4MRTC 5F2KA 2JO0A 1VQ5P 2L0QA 4XRQA 1GPJA 4WYMA 4HKGA 2VLNA 4NEOA 2FAEA 2MF4A 3M1MA 3HZQA 2MD9A 3GJNA 2VLQA 1FR2A 3G1IA 5KP8B 1YI2P 2AVAA 1E6JP 2CQ8A 2MVVA 2VLOA 1K8AQ 2M5RA 4XFXA 2LPKA 4BPGA 4U0FA 3CCUP 2EHSA 3Q20A 2EFJA 2QNWA 4CA3A 2K93A 2LTEA 2KG6A 4UHPB 1VQ9P 3CCLP 1GXHA 2FVFA 2KORA 2L6EA 1L0HA 2MR7A 3CXCO 2EHTA 1QVGO 2FQ1A 1M90Q 2L9FA 1UJZA 3U43A 2KODA 2NO8A 2OARA 1D1DA 2DGYA 2FHSC 1YHQP 2PENA 4PXHB 2XZ1C 5HGLA 2GZFA 4H2YC 4U0BA 2JAZA 4PWVB 2FQ2A 2KGCA 2LF4A 3DTJA 1AUMA 2GYKA 2M8NA 1W2BO 4XFYA 2CNRA 2QA4P 2KW2A 1EOQA 3NY7B 4COPA 3CC4P 1Q7YQ 4F37A 2ROQA 1VQMP 1AYIA
chains in the Genus database with same CATH topology
2GDYA 2K0XA 4MRTC 3EJDA 1DV5A 2MVUA 2L0QA 2PNGA 2FVEA 1X3OA 3EJEA 3EJBA 4HKGA 2L4BA 4NEOA 2FAEA 2MF4A 2FACA 2N5IA 2L22A 2MD9A 2AFDA 5KP8B 5EJDA 2AVAA 4BPHA 4IZ6A 1HQBA 2KG9A 1F80D 2KG8A 2CQ8A 2MVVA 2M5RA 2MY5A 1KLPA 2KOSA 2LPKA 2XZ0D 2GDXA 5KP7B 4BPGA 1VKUA 2FVAA 1ACPA 2GDWA 2LOLA 2K0YA 5HVCA 2EHSA 2JU2A 2QNWA 2LIWA 4CA3A 2K93A 2LTEA 2KG6A 4BPFA 2CG5B 2FVFA 2KORA 2MR8A 1HY8A 1L0IA 1L0HA 2MR7A 2AF8A 2K2QA 2KGEA 1AF8A 1DNYA 2JU1A 2EHTA 2KOQA 2N98A 2FQ1A 5HV8A 2L9FA 1OR5A 2KGDA 2CGQA 1NQ4A 1T8KA 2LL8A 3RG2A 5CZDB 2VSQA 2N50A 4DG9A 2X2BA 3GZLA 2FHSC 2AFEA 4H2XC 2LKIA 3GZMA 2N6ZA 2JQ4A 3LMOA 4PXHB 2XZ1C 4H2WC 2K94A 2FADA 4H2YC 2FQ0A 2K92A 3CE7A 4PWVB 2FQ2A 2KGCA 2DNWA 2LMLA 2N6YA 5KP6B 2KR5A 2N5HA 2JGPA 4R0MA 2CNRA 2KW2A 2LIUA 2KOPA 2KWLA 3NY7B 2ROQA 2KOOA 2KGAA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2GDY A;  2K0X A;  4MRT C;  3EJD A;  1DV5 A;  2MVU A;  2L0Q A;  2PNG A;  2FVE A;  1X3O A;  3EJE A;  3EJB A;  4HKG A;  2L4B A;  4NEO A;  2FAE A;  2MF4 A;  2FAC A;  2N5I A;  2L22 A;  2MD9 A;  2AFD A;  5KP8 B;  5EJD A;  2AVA A;  4BPH A;  4IZ6 A;  1HQB A;  2KG9 A;  1F80 D;  2KG8 A;  2CQ8 A;  2MVV A;  2M5R A;  2MY5 A;  1KLP A;  2KOS A;  2LPK A;  2XZ0 D;  2GDX A;  5KP7 B;  4BPG A;  1VKU A;  2FVA A;  1ACP A;  2GDW A;  2LOL A;  2K0Y A;  5HVC A;  2EHS A;  2JU2 A;  2QNW A;  2LIW A;  4CA3 A;  2K93 A;  2LTE A;  2KG6 A;  4BPF A;  2CG5 B;  2FVF A;  2KOR A;  2MR8 A;  1HY8 A;  1L0I A;  1L0H A;  2MR7 A;  2AF8 A;  2K2Q A;  2KGE A;  1AF8 A;  1DNY A;  2JU1 A;  2EHT A;  2KOQ A;  2N98 A;  2FQ1 A;  5HV8 A;  2L9F A;  1OR5 A;  2KGD A;  2CGQ A;  1NQ4 A;  1T8K A;  2LL8 A;  3RG2 A;  5CZD B;  2VSQ A;  2N50 A;  4DG9 A;  2X2B A;  3GZL A;  2FHS C;  2AFE A;  4H2X C;  2LKI A;  3GZM A;  2N6Z A;  2JQ4 A;  3LMO A;  4PXH B;  2XZ1 C;  4H2W C;  2K94 A;  2FAD A;  4H2Y C;  2FQ0 A;  2K92 A;  3CE7 A;  4PWV B;  2FQ2 A;  2KGC A;  2DNW A;  2LML A;  2N6Y A;  5KP6 B;  2KR5 A;  2N5H A;  2JGP A;  4R0M A;  2CNR A;  2KW2 A;  2LIU A;  2KOP A;  2KWL A;  3NY7 B;  2ROQ A;  2KOO A;  2KGA A; 
#chains in the Genus database with same CATH topology
 1YIT P;  2JB0 A;  4M0I A;  2JBG A;  3CME P;  2ERH A;  2PNG A;  2K0D X;  1Z6M A;  3CCS P;  1E0H A;  2N5I A;  2L22 A;  1MZ8 A;  3G6E P;  2M8L A;  1IMQ A;  4COC A;  1VQL P;  1VQP P;  2XT1 A;  1A43 A;  4BPH A;  2QEX P;  2KG8 A;  2E1M A;  4QKO A;  1M6N A;  4XRO A;  1VQN P;  1NJI Q;  2XZ0 D;  5BS2 A;  1Q81 Q;  1Q86 Q;  1UNK A;  2FVA A;  1ACP A;  2GDW A;  3I55 P;  2LOL A;  1RO2 A;  3G29 A;  1VQO P;  1M6E X;  2JYL A;  2LIW A;  4BPF A;  4IPY A;  4GR6 A;  1HY8 A;  1L0I A;  2AF8 A;  2KGE A;  5JPA A;  1YJN P;  2KGD A;  2CGQ A;  1NQ4 A;  3DS5 A;  1N8R Q;  3DPH A;  2PEO A;  5CZD B;  3CCM P;  4U0D A;  1S72 P;  4DG9 A;  2OTL P;  3GZL A;  2AFE A;  1JJ2 O;  2JQ4 A;  3CPW O;  1ZNV A;  4H2W C;  3DS2 A;  2FQ0 A;  3CE7 A;  4GR2 A;  2LML A;  3NTE A;  5KP6 B;  2N5H A;  1VQK P;  2JGP A;  1M74 A;  2ONT A;  3LRY A;  5I4T G;  4U0E A;  1VQ8 P;  2KGA A;  2K0X A;  3CC7 P;  3DS0 A;  3G71 P;  1EIA A;  1Q82 Q;  3E2D A;  2FVE A;  1X3O A;  4PH0 A;  5HGO A;  3G28 A;  3CCR P;  3CCJ P;  3CMA P;  2PEM A;  3H47 A;  3CCV P;  5EJD A;  3G26 A;  5HGN A;  2Z45 A;  4IZ6 A;  3RG6 C;  1F80 D;  2MY5 A;  2KOS A;  3DS1 A;  5KP7 B;  2PEQ A;  2Z44 A;  1VKU A;  2GZE A;  2K0Y A;  2PEK A;  2GZJ A;  3GKL C;  1VQ4 P;  1QRJ A;  2CWO A;  1AF8 A;  2KOQ A;  1YJW P;  1OR5 A;  2LL8 A;  2VLP A;  3DS3 A;  3RG2 A;  1KC8 Q;  1A8O A;  2VSQ A;  1KD1 Q;  3G4S P;  4H2X C;  3GZM A;  3B4Q A;  3G1G A;  2N6Z A;  1QVF O;  1IMP A;  2K94 A;  1BXI A;  2FAD A;  3VRL C;  2K92 A;  3DS4 A;  2DNW A;  2N6Y A;  2KR5 A;  4R0M A;  2KOP A;  2PEI A;  5EW5 E;  2BHV A;  2GDY A;  3MGE A;  3OW2 O;  3P05 A;  3EJD A;  1DV5 A;  2XV6 A;  1YJ9 P;  2MVU A;  1ZMB A;  2OTJ P;  3EJE A;  3EJB A;  1M1K Q;  2L4B A;  1VQ6 P;  2FAC A;  1GXG A;  2Z46 A;  2AFD A;  2EIA A;  3CD6 P;  2GZG A;  2PY8 A;  1HQB A;  2KG9 A;  1KLP A;  3G0V A;  2GDX A;  1K73 Q;  2P9X A;  5HVC A;  1K30 A;  2JU2 A;  3H0D A;  3WBH A;  5BS1 A;  1RNI A;  4XFZ A;  2CG5 B;  4QNB A;  2MR8 A;  2K5X A;  1RO0 A;  2K2Q A;  1VHN A;  1DNY A;  2JU1 A;  1K9M Q;  1KQS O;  2N98 A;  5HV8 A;  1CEI A;  5F2N A;  1T8K A;  1YIJ P;  3I56 P;  2XXM A;  2PEJ A;  2JYG A;  4U0C A;  2N50 A;  2X2B A;  1EMV A;  7CEI A;  2LKI A;  2M8P A;  3LMO A;  4PH1 A;  3CCE P;  3H4E A;  1IUQ A;  3HYB A;  3G21 A;  3CCQ P;  5HGM A;  4U0A A;  2GZI A;  2LIU A;  2KWL A;  3B5I A;  3CC2 P;  1VQ7 P;  2KOO A;  5F2O A;  2WPT A;  1BAJ A;  5DCK A;  2EG5 A;  2BUO A;  4MRT C;  5F2K A;  2JO0 A;  1VQ5 P;  2L0Q A;  4XRQ A;  1GPJ A;  4WYM A;  4HKG A;  2VLN A;  4NEO A;  2FAE A;  2MF4 A;  3M1M A;  3HZQ A;  2MD9 A;  3GJN A;  2VLQ A;  1FR2 A;  3G1I A;  5KP8 B;  1YI2 P;  2AVA A;  1E6J P;  2CQ8 A;  2MVV A;  2VLO A;  1K8A Q;  2M5R A;  4XFX A;  2LPK A;  4BPG A;  4U0F A;  3CCU P;  2EHS A;  3Q20 A;  2EFJ A;  2QNW A;  4CA3 A;  2K93 A;  2LTE A;  2KG6 A;  4UHP B;  1VQ9 P;  3CCL P;  1GXH A;  2FVF A;  2KOR A;  2L6E A;  1L0H A;  2MR7 A;  3CXC O;  2EHT A;  1QVG O;  2FQ1 A;  1M90 Q;  2L9F A;  1UJZ A;  3U43 A;  2KOD A;  2NO8 A;  2OAR A;  1D1D A;  2DGY A;  2FHS C;  1YHQ P;  2PEN A;  4PXH B;  2XZ1 C;  5HGL A;  2GZF A;  4H2Y C;  4U0B A;  2JAZ A;  4PWV B;  2FQ2 A;  2KGC A;  2LF4 A;  3DTJ A;  1AUM A;  2GYK A;  2M8N A;  1W2B O;  4XFY A;  2CNR A;  2QA4 P;  2KW2 A;  1EOQ A;  3NY7 B;  4COP A;  3CC4 P;  1Q7Y Q;  4F37 A;  2ROQ A;  1VQM P;  1AYI A; 
#chains in the Genus database with same CATH homology
 2GDY A;  2K0X A;  4MRT C;  3EJD A;  1DV5 A;  2MVU A;  2L0Q A;  2PNG A;  2FVE A;  1X3O A;  3EJE A;  3EJB A;  4HKG A;  2L4B A;  4NEO A;  2FAE A;  2MF4 A;  2FAC A;  2N5I A;  2L22 A;  2MD9 A;  2AFD A;  5KP8 B;  5EJD A;  2AVA A;  4BPH A;  4IZ6 A;  1HQB A;  2KG9 A;  1F80 D;  2KG8 A;  2CQ8 A;  2MVV A;  2M5R A;  2MY5 A;  1KLP A;  2KOS A;  2LPK A;  2XZ0 D;  2GDX A;  5KP7 B;  4BPG A;  1VKU A;  2FVA A;  1ACP A;  2GDW A;  2LOL A;  2K0Y A;  5HVC A;  2EHS A;  2JU2 A;  2QNW A;  2LIW A;  4CA3 A;  2K93 A;  2LTE A;  2KG6 A;  4BPF A;  2CG5 B;  2FVF A;  2KOR A;  2MR8 A;  1HY8 A;  1L0I A;  1L0H A;  2MR7 A;  2AF8 A;  2K2Q A;  2KGE A;  1AF8 A;  1DNY A;  2JU1 A;  2EHT A;  2KOQ A;  2N98 A;  2FQ1 A;  5HV8 A;  2L9F A;  1OR5 A;  2KGD A;  2CGQ A;  1NQ4 A;  1T8K A;  2LL8 A;  3RG2 A;  5CZD B;  2VSQ A;  2N50 A;  4DG9 A;  2X2B A;  3GZL A;  2FHS C;  2AFE A;  4H2X C;  2LKI A;  3GZM A;  2N6Z A;  2JQ4 A;  3LMO A;  4PXH B;  2XZ1 C;  4H2W C;  2K94 A;  2FAD A;  4H2Y C;  2FQ0 A;  2K92 A;  3CE7 A;  4PWV B;  2FQ2 A;  2KGC A;  2DNW A;  2LML A;  2N6Y A;  5KP6 B;  2KR5 A;  2N5H A;  2JGP A;  4R0M A;  2CNR A;  2KW2 A;  2LIU A;  2KOP A;  2KWL A;  3NY7 B;  2ROQ A;  2KOO A;  2KGA A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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