5HV8A

Solution structure of an octanoyl- loaded acyl carrier protein domain from module mlsa2 of the mycolactone polyketide synthase.
Total Genus 26
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
26
sequence length
95
structure length
95
Chain Sequence
GSHMRLNGLSPQQQQQTLATLVAAATATVLGHHTPESISPATAFKDLGIDSLTALELRNTLTHNTGLDLPPTLIFDHPTPHALTQHLHTRLTQSH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Type I modular polyketide synthase
publication title Sticky swinging arm dynamics: studies of an acyl carrier protein domain from the mycolactone polyketide synthase.
pubmed doi rcsb
source organism Mycobacterium ulcerans
molecule tags Transferase
total genus 26
structure length 95
sequence length 95
ec nomenclature
pdb deposition date 2016-01-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 5hv8A00
3RG2A 2GDXA 2KG6A 1DV5A 2CG5B 3EJDA 2FVAA 2DNWA 2K2QA 1L0IA 2KR5A 2QNWA 2L0QA 2MR8A 2JU1A 2K93A 3CE7A 2ROQA 1HY8A 2JGPA 2FAEA 4PXHB 2JQ4A 2KGCA 2LMLA 2N98A 2EHTA 2MVUA 2FHSC 2MY5A 2FACA 4NEOA 2MD9A 2AFDA 2KOPA 2KORA 2K0YA 2K92A 2N5HA 4H2XC 2CGQA 5HV8A 4BPFA 1ACPA 4PWVB 4H2WC 2AFEA 1X3OA 5CZDB 4H2YC 5KP8B 2XZ1C 1AF8A 2N50A 5EJDA 2KGAA 2KG9A 3EJEA 2L4BA 2JU2A 2EHSA 2L9FA 2LKIA 5KP7B 4DG9A 4CA3A 2KWLA 2CNRA 2X2BA 2LOLA 2N5IA 2GDYA 1F80D 2KGEA 5HVCA 1KLPA 2M5RA 2FADA 4R0MA 2KOQA 2AF8A 5KP6B 2VSQA 2LL8A 2FQ2A 2KG8A 2K0XA 2L22A 2LPKA 2KOOA 2LIWA 2N6ZA 3GZMA 1OR5A 4BPGA 4BPHA 2FVEA 2MR7A 2GDWA 2LTEA 3EJBA 1L0HA 2FQ1A 4HKGA 2KW2A 3LMOA 2FQ0A 2N6YA 4MRTC 2AVAA 1HQBA 1DNYA 1T8KA 2FVFA 3GZLA 2LIUA 2MF4A 2KOSA 2MVVA 2XZ0D 2K94A 2PNGA 2KGDA 4IZ6A 3NY7B 1VKUA 2CQ8A 1NQ4A
chains in the Genus database with same CATH superfamily
1NJIQ 2BHVA 3EJDA 1MZ8A 2GZGA 3I56P 3G26A 2EIAA 4UHPB 2MR8A 4U0EA 4PXHB 2FAEA 2QEXP 2JO0A 1YJWP 4XRQA 2PEOA 2ERHA 3G6EP 2VLPA 1M74A 2KOPA 2CGQA 3CCSP 3NTEA 2WPTA 1FR2A 1X3OA 2OARA 2XZ1C 1AF8A 1QVFO 2GZIA 3DS4A 1BAJA 2JBGA 2L4BA 2L9FA 3VRLC 3GKLC 3H4EA 5KP7B 4DG9A 1AUMA 2KWLA 3B4QA 1EMVA 1F80D 2P9XA 4XFXA 2M5RA 3MGEA 2JAZA 3B5IA 1QRJA 2EFJA 1AYIA 2NO8A 3G4SP 1VQ8P 3GZMA 1OR5A 3CCRP 4BPGA 1M1KQ 1VQPP 4BPHA 2FVEA 2LTEA 1L0HA 2CWOA 4U0DA 2N6YA 2AVAA 1DNYA 3GZLA 1D1DA 1Z6MA 2KGDA 3NY7B 1BXIA 3RG2A 2GDXA 1W2BO 2M8LA 1DV5A 2CG5B 1JJ2O 2FVAA 2DNWA 5F2OA 2K2QA 2M8NA 2KR5A 2L0QA 1N8RQ 4COCA 2ROQA 3M1MA 3CD6P 3G28A 2KGCA 5HGMA 2LMLA 2N98A 1EIAA 1Q7YQ 2MVUA 2MY5A 4NEOA 3DS3A 4H2XC 1E0HA 4U0FA 1YJ9P 2XXMA 1ACPA 1M6NA 4H2WC 2AFEA 3G1IA 4GR6A 5HGLA 1K30A 3EJEA 2VLQA 3GJNA 2DGYA 2JU2A 5DCKA 2EHSA 3P05A 1VQMP 2L6EA 1A8OA 3E2DA 3G1GA 3CCJP 2LOLA 2XT1A 3CCQP 2N5IA 2K5XA 1RNIA 5BS1A 2FADA 5HGNA 1ZMBA 5KP6B 2LL8A 2FQ2A 1Q86Q 3CCVP 3LRYA 2LIWA 2PEIA 1VQKP 2FQ1A 4QNBA 1VQLP 2FQ0A 1E6JP 1VQOP 2JYLA 4MRTC 1HQBA 1Q82Q 1VQ7P 2GZJA 2FVFA 1IMPA 4F37A 2MF4A 2KOSA 1IUQA 1ZNVA 1VQ4P 3G21A 2JB0A 1UJZA 1VQNP 2KG6A 3U43A 3CCLP 3DTJA 1L0IA 2QNWA 3DS5A 3CE7A 5F2NA 1HY8A 2JGPA 3CCUP 2QA4P 4M0IA 2FHSC 2FACA 3CMEP 3HZQA 2Z45A 3OW2O 2PEKA 2K0YA 2N5HA 1VHNA 4PH0A 5BS2A 2Z46A 4PWVB 4GR2A 4U0BA 2KGAA 3DPHA 2GYKA 2KG9A 5EW5E 3H47A 2LKIA 4CA3A 2CNRA 4IPYA 3DS0A 1KC8Q 1YHQP 2PENA 3H0DA 3CCEP 1KQSO 4R0MA 3G29A 3CC4P 2KG8A 1GXHA 2KOOA 4U0AA 3RG6C 2KODA 5JPAA 4XROA 2GDWA 3CMAP 5HGOA 4HKGA 2KW2A 3CPWO 2VLNA 3CCMP 1QVGO 2E1MA 1T8KA 1M6EX 1KD1Q 3Q20A 2XZ0D 2PNGA 3CC2P 1VQ6P 4COPA 2CQ8A 1NQ4A 2BUOA 3HYBA 3DS2A 1GPJA 2GZEA 2PEMA 2XV6A 2JU1A 2K93A 2LF4A 2EG5A 2JQ4A 5F2KA 1YIJP 2Z44A 2EHTA 3I55P 2MD9A 2AFDA 2KORA 2K92A 4WYMA 5HV8A 4BPFA 4QKOA 1UNKA 7CEIA 1A43A 2K0DX 5CZDB 4H2YC 5KP8B 1K73Q 4XFYA 2M8PA 2OTLP 2N50A 1RO0A 5EJDA 2OTJP 5I4TG 3G0VA 1YI2P 1M90Q 3DS1A 2PEQA 1GXGA 2X2BA 1CEIA 4XFZA 2GDYA 2KGEA 5HVCA 1IMQA 1KLPA 2KOQA 2AF8A 3CC7P 3CXCO 1Q81Q 2VSQA 1YJNP 2VLOA 2K0XA 2L22A 2LPKA 2N6ZA 2PEJA 4PH1A 1VQ5P 1VQ9P 2GZFA 1S72P 1RO2A 2MR7A 2JYGA 3EJBA 3LMOA 1EOQA 4U0CA 1YITP 2LIUA 2ONTA 2MVVA 3WBHA 2K94A 4IZ6A 3G71P 1VKUA 2PY8A 1K9MQ 1K8AQ
chains in the Genus database with same CATH topology
3RG2A 2GDXA 2KG6A 1DV5A 2CG5B 3EJDA 2FVAA 2DNWA 2K2QA 1L0IA 2KR5A 2QNWA 2L0QA 2MR8A 2JU1A 2K93A 3CE7A 2ROQA 1HY8A 2JGPA 2FAEA 4PXHB 2JQ4A 2KGCA 2LMLA 2N98A 2EHTA 2MVUA 2FHSC 2MY5A 2FACA 4NEOA 2MD9A 2AFDA 2KOPA 2KORA 2K0YA 2K92A 2N5HA 4H2XC 2CGQA 5HV8A 4BPFA 1ACPA 4PWVB 4H2WC 2AFEA 1X3OA 5CZDB 4H2YC 5KP8B 2XZ1C 1AF8A 2N50A 5EJDA 2KGAA 2KG9A 3EJEA 2L4BA 2JU2A 2EHSA 2L9FA 2LKIA 5KP7B 4DG9A 4CA3A 2KWLA 2CNRA 2X2BA 2LOLA 2N5IA 2GDYA 1F80D 2KGEA 5HVCA 1KLPA 2M5RA 2FADA 4R0MA 2KOQA 2AF8A 5KP6B 2VSQA 2LL8A 2FQ2A 2KG8A 2K0XA 2L22A 2LPKA 2KOOA 2LIWA 2N6ZA 3GZMA 1OR5A 4BPGA 4BPHA 2FVEA 2MR7A 2GDWA 2LTEA 3EJBA 1L0HA 2FQ1A 4HKGA 2KW2A 3LMOA 2FQ0A 2N6YA 4MRTC 2AVAA 1HQBA 1DNYA 1T8KA 2FVFA 3GZLA 2LIUA 2MF4A 2KOSA 2MVVA 2XZ0D 2K94A 2PNGA 2KGDA 4IZ6A 3NY7B 1VKUA 2CQ8A 1NQ4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3RG2 A;  2GDX A;  2KG6 A;  1DV5 A;  2CG5 B;  3EJD A;  2FVA A;  2DNW A;  2K2Q A;  1L0I A;  2KR5 A;  2QNW A;  2L0Q A;  2MR8 A;  2JU1 A;  2K93 A;  3CE7 A;  2ROQ A;  1HY8 A;  2JGP A;  2FAE A;  4PXH B;  2JQ4 A;  2KGC A;  2LML A;  2N98 A;  2EHT A;  2MVU A;  2FHS C;  2MY5 A;  2FAC A;  4NEO A;  2MD9 A;  2AFD A;  2KOP A;  2KOR A;  2K0Y A;  2K92 A;  2N5H A;  4H2X C;  2CGQ A;  5HV8 A;  4BPF A;  1ACP A;  4PWV B;  4H2W C;  2AFE A;  1X3O A;  5CZD B;  4H2Y C;  5KP8 B;  2XZ1 C;  1AF8 A;  2N50 A;  5EJD A;  2KGA A;  2KG9 A;  3EJE A;  2L4B A;  2JU2 A;  2EHS A;  2L9F A;  2LKI A;  5KP7 B;  4DG9 A;  4CA3 A;  2KWL A;  2CNR A;  2X2B A;  2LOL A;  2N5I A;  2GDY A;  1F80 D;  2KGE A;  5HVC A;  1KLP A;  2M5R A;  2FAD A;  4R0M A;  2KOQ A;  2AF8 A;  5KP6 B;  2VSQ A;  2LL8 A;  2FQ2 A;  2KG8 A;  2K0X A;  2L22 A;  2LPK A;  2KOO A;  2LIW A;  2N6Z A;  3GZM A;  1OR5 A;  4BPG A;  4BPH A;  2FVE A;  2MR7 A;  2GDW A;  2LTE A;  3EJB A;  1L0H A;  2FQ1 A;  4HKG A;  2KW2 A;  3LMO A;  2FQ0 A;  2N6Y A;  4MRT C;  2AVA A;  1HQB A;  1DNY A;  1T8K A;  2FVF A;  3GZL A;  2LIU A;  2MF4 A;  2KOS A;  2MVV A;  2XZ0 D;  2K94 A;  2PNG A;  2KGD A;  4IZ6 A;  3NY7 B;  1VKU A;  2CQ8 A;  1NQ4 A; 
#chains in the Genus database with same CATH topology
 1NJI Q;  2BHV A;  3EJD A;  1MZ8 A;  2GZG A;  3I56 P;  3G26 A;  2EIA A;  4UHP B;  2MR8 A;  4U0E A;  4PXH B;  2FAE A;  2QEX P;  2JO0 A;  1YJW P;  4XRQ A;  2PEO A;  2ERH A;  3G6E P;  2VLP A;  1M74 A;  2KOP A;  2CGQ A;  3CCS P;  3NTE A;  2WPT A;  1FR2 A;  1X3O A;  2OAR A;  2XZ1 C;  1AF8 A;  1QVF O;  2GZI A;  3DS4 A;  1BAJ A;  2JBG A;  2L4B A;  2L9F A;  3VRL C;  3GKL C;  3H4E A;  5KP7 B;  4DG9 A;  1AUM A;  2KWL A;  3B4Q A;  1EMV A;  1F80 D;  2P9X A;  4XFX A;  2M5R A;  3MGE A;  2JAZ A;  3B5I A;  1QRJ A;  2EFJ A;  1AYI A;  2NO8 A;  3G4S P;  1VQ8 P;  3GZM A;  1OR5 A;  3CCR P;  4BPG A;  1M1K Q;  1VQP P;  4BPH A;  2FVE A;  2LTE A;  1L0H A;  2CWO A;  4U0D A;  2N6Y A;  2AVA A;  1DNY A;  3GZL A;  1D1D A;  1Z6M A;  2KGD A;  3NY7 B;  1BXI A;  3RG2 A;  2GDX A;  1W2B O;  2M8L A;  1DV5 A;  2CG5 B;  1JJ2 O;  2FVA A;  2DNW A;  5F2O A;  2K2Q A;  2M8N A;  2KR5 A;  2L0Q A;  1N8R Q;  4COC A;  2ROQ A;  3M1M A;  3CD6 P;  3G28 A;  2KGC A;  5HGM A;  2LML A;  2N98 A;  1EIA A;  1Q7Y Q;  2MVU A;  2MY5 A;  4NEO A;  3DS3 A;  4H2X C;  1E0H A;  4U0F A;  1YJ9 P;  2XXM A;  1ACP A;  1M6N A;  4H2W C;  2AFE A;  3G1I A;  4GR6 A;  5HGL A;  1K30 A;  3EJE A;  2VLQ A;  3GJN A;  2DGY A;  2JU2 A;  5DCK A;  2EHS A;  3P05 A;  1VQM P;  2L6E A;  1A8O A;  3E2D A;  3G1G A;  3CCJ P;  2LOL A;  2XT1 A;  3CCQ P;  2N5I A;  2K5X A;  1RNI A;  5BS1 A;  2FAD A;  5HGN A;  1ZMB A;  5KP6 B;  2LL8 A;  2FQ2 A;  1Q86 Q;  3CCV P;  3LRY A;  2LIW A;  2PEI A;  1VQK P;  2FQ1 A;  4QNB A;  1VQL P;  2FQ0 A;  1E6J P;  1VQO P;  2JYL A;  4MRT C;  1HQB A;  1Q82 Q;  1VQ7 P;  2GZJ A;  2FVF A;  1IMP A;  4F37 A;  2MF4 A;  2KOS A;  1IUQ A;  1ZNV A;  1VQ4 P;  3G21 A;  2JB0 A;  1UJZ A;  1VQN P;  2KG6 A;  3U43 A;  3CCL P;  3DTJ A;  1L0I A;  2QNW A;  3DS5 A;  3CE7 A;  5F2N A;  1HY8 A;  2JGP A;  3CCU P;  2QA4 P;  4M0I A;  2FHS C;  2FAC A;  3CME P;  3HZQ A;  2Z45 A;  3OW2 O;  2PEK A;  2K0Y A;  2N5H A;  1VHN A;  4PH0 A;  5BS2 A;  2Z46 A;  4PWV B;  4GR2 A;  4U0B A;  2KGA A;  3DPH A;  2GYK A;  2KG9 A;  5EW5 E;  3H47 A;  2LKI A;  4CA3 A;  2CNR A;  4IPY A;  3DS0 A;  1KC8 Q;  1YHQ P;  2PEN A;  3H0D A;  3CCE P;  1KQS O;  4R0M A;  3G29 A;  3CC4 P;  2KG8 A;  1GXH A;  2KOO A;  4U0A A;  3RG6 C;  2KOD A;  5JPA A;  4XRO A;  2GDW A;  3CMA P;  5HGO A;  4HKG A;  2KW2 A;  3CPW O;  2VLN A;  3CCM P;  1QVG O;  2E1M A;  1T8K A;  1M6E X;  1KD1 Q;  3Q20 A;  2XZ0 D;  2PNG A;  3CC2 P;  1VQ6 P;  4COP A;  2CQ8 A;  1NQ4 A;  2BUO A;  3HYB A;  3DS2 A;  1GPJ A;  2GZE A;  2PEM A;  2XV6 A;  2JU1 A;  2K93 A;  2LF4 A;  2EG5 A;  2JQ4 A;  5F2K A;  1YIJ P;  2Z44 A;  2EHT A;  3I55 P;  2MD9 A;  2AFD A;  2KOR A;  2K92 A;  4WYM A;  5HV8 A;  4BPF A;  4QKO A;  1UNK A;  7CEI A;  1A43 A;  2K0D X;  5CZD B;  4H2Y C;  5KP8 B;  1K73 Q;  4XFY A;  2M8P A;  2OTL P;  2N50 A;  1RO0 A;  5EJD A;  2OTJ P;  5I4T G;  3G0V A;  1YI2 P;  1M90 Q;  3DS1 A;  2PEQ A;  1GXG A;  2X2B A;  1CEI A;  4XFZ A;  2GDY A;  2KGE A;  5HVC A;  1IMQ A;  1KLP A;  2KOQ A;  2AF8 A;  3CC7 P;  3CXC O;  1Q81 Q;  2VSQ A;  1YJN P;  2VLO A;  2K0X A;  2L22 A;  2LPK A;  2N6Z A;  2PEJ A;  4PH1 A;  1VQ5 P;  1VQ9 P;  2GZF A;  1S72 P;  1RO2 A;  2MR7 A;  2JYG A;  3EJB A;  3LMO A;  1EOQ A;  4U0C A;  1YIT P;  2LIU A;  2ONT A;  2MVV A;  3WBH A;  2K94 A;  4IZ6 A;  3G71 P;  1VKU A;  2PY8 A;  1K9M Q;  1K8A Q; 
#chains in the Genus database with same CATH homology
 3RG2 A;  2GDX A;  2KG6 A;  1DV5 A;  2CG5 B;  3EJD A;  2FVA A;  2DNW A;  2K2Q A;  1L0I A;  2KR5 A;  2QNW A;  2L0Q A;  2MR8 A;  2JU1 A;  2K93 A;  3CE7 A;  2ROQ A;  1HY8 A;  2JGP A;  2FAE A;  4PXH B;  2JQ4 A;  2KGC A;  2LML A;  2N98 A;  2EHT A;  2MVU A;  2FHS C;  2MY5 A;  2FAC A;  4NEO A;  2MD9 A;  2AFD A;  2KOP A;  2KOR A;  2K0Y A;  2K92 A;  2N5H A;  4H2X C;  2CGQ A;  5HV8 A;  4BPF A;  1ACP A;  4PWV B;  4H2W C;  2AFE A;  1X3O A;  5CZD B;  4H2Y C;  5KP8 B;  2XZ1 C;  1AF8 A;  2N50 A;  5EJD A;  2KGA A;  2KG9 A;  3EJE A;  2L4B A;  2JU2 A;  2EHS A;  2L9F A;  2LKI A;  5KP7 B;  4DG9 A;  4CA3 A;  2KWL A;  2CNR A;  2X2B A;  2LOL A;  2N5I A;  2GDY A;  1F80 D;  2KGE A;  5HVC A;  1KLP A;  2M5R A;  2FAD A;  4R0M A;  2KOQ A;  2AF8 A;  5KP6 B;  2VSQ A;  2LL8 A;  2FQ2 A;  2KG8 A;  2K0X A;  2L22 A;  2LPK A;  2KOO A;  2LIW A;  2N6Z A;  3GZM A;  1OR5 A;  4BPG A;  4BPH A;  2FVE A;  2MR7 A;  2GDW A;  2LTE A;  3EJB A;  1L0H A;  2FQ1 A;  4HKG A;  2KW2 A;  3LMO A;  2FQ0 A;  2N6Y A;  4MRT C;  2AVA A;  1HQB A;  1DNY A;  1T8K A;  2FVF A;  3GZL A;  2LIU A;  2MF4 A;  2KOS A;  2MVV A;  2XZ0 D;  2K94 A;  2PNG A;  2KGD A;  4IZ6 A;  3NY7 B;  1VKU A;  2CQ8 A;  1NQ4 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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