2XZ0D

The structure of the 2:1 (partially occupied) complex between stearoyl acyl carrier protein desaturase from ricinus communis (castor bean) and acyl carrier protein.
Total Genus 7
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
7
sequence length
82
structure length
81
Chain Sequence
AKKETIDKVSDIVKEKLALGADVVVTADSEFSKLGADLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIEGLLEKKA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords ACYL-[ACYL-CARRIER-PROTEIN] DESATURASE, CHLOROPLASTIC
publication title Remote Control of Regioselectivity in Acyl-Acyl Carrier Protein-Desaturases.
pubmed doi rcsb
source organism Ricinus communis
molecule tags Oxidoreductase/lipid binding protein
total genus 7
structure length 81
sequence length 82
ec nomenclature
pdb deposition date 2010-11-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
D PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2xz0D00
2EHSA 2LIWA 2LPKA 4PWVB 3GZLA 2MD9A 2XZ1C 2DNWA 2QNWA 2LOLA 2L9FA 4CA3A 2K2QA 2MVUA 2AFEA 2JU1A 2KGAA 4H2YC 4PXHB 3EJEA 1X3OA 4MRTC 2N5IA 3CE7A 2CQ8A 2MVVA 2N6ZA 4BPHA 5KP7B 2N98A 2KORA 2GDXA 2L4BA 2CG5B 5HVCA 2AVAA 2JQ4A 2LIUA 5HV8A 2N6YA 2K93A 2KG9A 2N5HA 2MY5A 2K0YA 4BPGA 4NEOA 2AFDA 2KG6A 2FACA 2LL8A 4DG9A 2MR7A 1HY8A 2VSQA 5EJDA 2KGEA 2K0XA 1OR5A 1DV5A 4IZ6A 2CGQA 2L22A 4H2XC 2FHSC 2FADA 3NY7B 2GDWA 2KOPA 2CNRA 2MF4A 2FVEA 2JGPA 2LTEA 2FQ2A 1DNYA 2KWLA 2GDYA 5KP6B 2N50A 3EJDA 2LKIA 2KG8A 3LMOA 2AF8A 2KW2A 1L0HA 2L0QA 2EHTA 2KGCA 4BPFA 4R0MA 1L0IA 1HQBA 2X2BA 2LMLA 1KLPA 2FQ1A 5CZDB 2KGDA 4H2WC 2KOSA 2ROQA 2FQ0A 1VKUA 3EJBA 3GZMA 2XZ0D 3RG2A 4HKGA 2KOQA 2PNGA 2KOOA 2FAEA 2FVAA 5KP8B 1T8KA 2JU2A 2KR5A 1F80D 1NQ4A 2M5RA 2MR8A 1AF8A 2K94A 2FVFA 1ACPA 2K92A
chains in the Genus database with same CATH superfamily
2EHSA 2LIWA 2LPKA 2PEKA 4GR6A 2GZIA 1FR2A 4CA3A 2JB0A 5F2KA 3DS0A 4PH1A 2ONTA 2PEIA 2CWOA 3EJEA 2VLPA 1ZNVA 4XRQA 4BPHA 1UNKA 1YHQP 3G21A 3DS4A 2ERHA 1CEIA 4UHPB 2QEXP 3CCEP 3P05A 2PEMA 2K0YA 2VLOA 4NEOA 2AFDA 2PENA 4U0AA 2LL8A 1Q81Q 2VSQA 5F2NA 3DS3A 1QVGO 1EMVA 3Q20A 1YI2P 2FHSC 2FADA 4U0BA 2GDWA 4COCA 1RO0A 1YJNP 2K0DX 5BS1A 5KP6B 2LKIA 3LMOA 1VQMP 2AF8A 1L0HA 1IMQA 5HGLA 1E0HA 4R0MA 1HQBA 2LMLA 3U43A 5CZDB 3VRLC 3GZMA 4HKGA 3CC4P 2KOQA 5KP8B 2Z46A 1NQ4A 2M5RA 2E1MA 2K94A 1E6JP 2FVFA 2M8PA 1GPJA 3CCJP 3HZQA 4XFXA 3GZLA 2MD9A 3CXCO 2DNWA 2LOLA 3H0DA 1IMPA 3CCSP 1IUQA 1ZMBA 5EW5E 1EIAA 4XFYA 4H2YC 4MRTC 5DCKA 2GZGA 2CQ8A 2XXMA 3OW2O 3HYBA 3G1IA 3G6EP 2KORA 3CPWO 2AVAA 3CCRP 2LIUA 3B5IA 2N6YA 4GR2A 3G4SP 2KG9A 2N5HA 2MY5A 4BPGA 1EOQA 1YJWP 1KC8Q 2FACA 4XROA 4DG9A 1KD1Q 3DS5A 1HY8A 5EJDA 1M74A 2K0XA 4QNBA 4F37A 2CGQA 2L22A 2WPTA 4H2XC 2PEQA 3G26A 5JPAA 2BHVA 2GZEA 1YITP 1KQSO 2EG5A 7CEIA 2K5XA 3CMEP 2JGPA 2LTEA 1DNYA 2BUOA 2N50A 3NTEA 2KW2A 1K9MQ 2L0QA 1RO2A 1VQ8P 2KGCA 1BXIA 2X2BA 2OTLP 1Q86Q 2FQ0A 2XZ0D 1QVFO 3RG6C 3G28A 1AF8A 1ACPA 2K92A 1QRJA 4PWVB 2L9FA 2K2QA 2MVUA 2AFEA 1K8AQ 2KGAA 2P9XA 4PXHB 2MVVA 2N6ZA 5KP7B 2GDXA 2L4BA 3M1MA 2CG5B 5HVCA 2GYKA 1VQPP 2K93A 1W2BO 5HGOA 1AUMA 2LF4A 3I56P 4IPYA 1BAJA 3CCVP 3I55P 1VQLP 2PEOA 1DV5A 4IZ6A 4COPA 2XT1A 1D1DA 2CNRA 1GXHA 1AYIA 2FQ2A 2KWLA 2GDYA 3EJDA 2KG8A 4XFZA 1K30A 1N8RQ 1M90Q 4BPFA 1NJIQ 1KLPA 2FQ1A 2JYGA 2JO0A 4H2WC 1VQ4P 3EJBA 4U0CA 3RG2A 1UJZA 3DS2A 3GKLC 2KOOA 2FVAA 1VQOP 3H4EA 1F80D 5HGNA 2KODA 2XV6A 2VLQA 1S72P 2XZ1C 1RNIA 2QNWA 2L6EA 2Z45A 2NO8A 4U0FA 1K73Q 5I4TG 4M0IA 3CMAP 2JU1A 1Z6MA 2OTJP 3CD6P 3CCMP 1X3OA 4U0EA 3LRYA 2N5IA 2OARA 3CE7A 3WBHA 2GZJA 1JJ2O 2N98A 2M8LA 2EIAA 2JQ4A 5HV8A 1VQ5P 3DPHA 2JAZA 2DGYA 1YJ9P 1A8OA 1VQ6P 4QKOA 3CC7P 2KG6A 1Q7YQ 1VQ7P 3CC2P 2MR7A 4PH0A 3CCUP 2KGEA 1OR5A 3H47A 2EFJA 3NY7B 1VHNA 3B4QA 3GJNA 2KOPA 2MF4A 2FVEA 3CCLP 2VLNA 1VQ9P 1M6EX 2JBGA 1M6NA 2PEJA 2PY8A 1A43A 1Q82Q 2M8NA 1YIJP 3G0VA 5BS2A 3DS1A 2EHTA 3DTJA 1L0IA 2QA4P 5F2OA 1GXGA 4WYMA 3E2DA 3G71P 2KGDA 5HGMA 2KOSA 2Z44A 3G29A 2ROQA 1VQNP 1VKUA 3CCQP 1VQKP 2GZFA 2PNGA 3G1GA 2JYLA 2FAEA 1T8KA 2JU2A 2KR5A 4U0DA 1MZ8A 1M1KQ 2MR8A 3MGEA
chains in the Genus database with same CATH topology
2EHSA 2LIWA 2LPKA 4PWVB 3GZLA 2MD9A 2XZ1C 2DNWA 2QNWA 2LOLA 2L9FA 4CA3A 2K2QA 2MVUA 2AFEA 2JU1A 2KGAA 4H2YC 4PXHB 3EJEA 1X3OA 4MRTC 2N5IA 3CE7A 2CQ8A 2MVVA 2N6ZA 4BPHA 5KP7B 2N98A 2KORA 2GDXA 2L4BA 2CG5B 5HVCA 2AVAA 2JQ4A 2LIUA 5HV8A 2N6YA 2K93A 2KG9A 2N5HA 2MY5A 2K0YA 4BPGA 4NEOA 2AFDA 2KG6A 2FACA 2LL8A 4DG9A 2MR7A 1HY8A 2VSQA 5EJDA 2KGEA 2K0XA 1OR5A 1DV5A 4IZ6A 2CGQA 2L22A 4H2XC 2FHSC 2FADA 3NY7B 2GDWA 2KOPA 2CNRA 2MF4A 2FVEA 2JGPA 2LTEA 2FQ2A 1DNYA 2KWLA 2GDYA 5KP6B 2N50A 3EJDA 2LKIA 2KG8A 3LMOA 2AF8A 2KW2A 1L0HA 2L0QA 2EHTA 2KGCA 4BPFA 4R0MA 1L0IA 1HQBA 2X2BA 2LMLA 1KLPA 2FQ1A 5CZDB 2KGDA 4H2WC 2KOSA 2ROQA 2FQ0A 1VKUA 3EJBA 3GZMA 2XZ0D 3RG2A 4HKGA 2KOQA 2PNGA 2KOOA 2FAEA 2FVAA 5KP8B 1T8KA 2JU2A 2KR5A 1F80D 1NQ4A 2M5RA 2MR8A 1AF8A 2K94A 2FVFA 1ACPA 2K92A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2EHS A;  2LIW A;  2LPK A;  4PWV B;  3GZL A;  2MD9 A;  2XZ1 C;  2DNW A;  2QNW A;  2LOL A;  2L9F A;  4CA3 A;  2K2Q A;  2MVU A;  2AFE A;  2JU1 A;  2KGA A;  4H2Y C;  4PXH B;  3EJE A;  1X3O A;  4MRT C;  2N5I A;  3CE7 A;  2CQ8 A;  2MVV A;  2N6Z A;  4BPH A;  5KP7 B;  2N98 A;  2KOR A;  2GDX A;  2L4B A;  2CG5 B;  5HVC A;  2AVA A;  2JQ4 A;  2LIU A;  5HV8 A;  2N6Y A;  2K93 A;  2KG9 A;  2N5H A;  2MY5 A;  2K0Y A;  4BPG A;  4NEO A;  2AFD A;  2KG6 A;  2FAC A;  2LL8 A;  4DG9 A;  2MR7 A;  1HY8 A;  2VSQ A;  5EJD A;  2KGE A;  2K0X A;  1OR5 A;  1DV5 A;  4IZ6 A;  2CGQ A;  2L22 A;  4H2X C;  2FHS C;  2FAD A;  3NY7 B;  2GDW A;  2KOP A;  2CNR A;  2MF4 A;  2FVE A;  2JGP A;  2LTE A;  2FQ2 A;  1DNY A;  2KWL A;  2GDY A;  5KP6 B;  2N50 A;  3EJD A;  2LKI A;  2KG8 A;  3LMO A;  2AF8 A;  2KW2 A;  1L0H A;  2L0Q A;  2EHT A;  2KGC A;  4BPF A;  4R0M A;  1L0I A;  1HQB A;  2X2B A;  2LML A;  1KLP A;  2FQ1 A;  5CZD B;  2KGD A;  4H2W C;  2KOS A;  2ROQ A;  2FQ0 A;  1VKU A;  3EJB A;  3GZM A;  2XZ0 D;  3RG2 A;  4HKG A;  2KOQ A;  2PNG A;  2KOO A;  2FAE A;  2FVA A;  5KP8 B;  1T8K A;  2JU2 A;  2KR5 A;  1F80 D;  1NQ4 A;  2M5R A;  2MR8 A;  1AF8 A;  2K94 A;  2FVF A;  1ACP A;  2K92 A; 
#chains in the Genus database with same CATH topology
 2EHS A;  2LIW A;  2LPK A;  2PEK A;  4GR6 A;  2GZI A;  1FR2 A;  4CA3 A;  2JB0 A;  5F2K A;  3DS0 A;  4PH1 A;  2ONT A;  2PEI A;  2CWO A;  3EJE A;  2VLP A;  1ZNV A;  4XRQ A;  4BPH A;  1UNK A;  1YHQ P;  3G21 A;  3DS4 A;  2ERH A;  1CEI A;  4UHP B;  2QEX P;  3CCE P;  3P05 A;  2PEM A;  2K0Y A;  2VLO A;  4NEO A;  2AFD A;  2PEN A;  4U0A A;  2LL8 A;  1Q81 Q;  2VSQ A;  5F2N A;  3DS3 A;  1QVG O;  1EMV A;  3Q20 A;  1YI2 P;  2FHS C;  2FAD A;  4U0B A;  2GDW A;  4COC A;  1RO0 A;  1YJN P;  2K0D X;  5BS1 A;  5KP6 B;  2LKI A;  3LMO A;  1VQM P;  2AF8 A;  1L0H A;  1IMQ A;  5HGL A;  1E0H A;  4R0M A;  1HQB A;  2LML A;  3U43 A;  5CZD B;  3VRL C;  3GZM A;  4HKG A;  3CC4 P;  2KOQ A;  5KP8 B;  2Z46 A;  1NQ4 A;  2M5R A;  2E1M A;  2K94 A;  1E6J P;  2FVF A;  2M8P A;  1GPJ A;  3CCJ P;  3HZQ A;  4XFX A;  3GZL A;  2MD9 A;  3CXC O;  2DNW A;  2LOL A;  3H0D A;  1IMP A;  3CCS P;  1IUQ A;  1ZMB A;  5EW5 E;  1EIA A;  4XFY A;  4H2Y C;  4MRT C;  5DCK A;  2GZG A;  2CQ8 A;  2XXM A;  3OW2 O;  3HYB A;  3G1I A;  3G6E P;  2KOR A;  3CPW O;  2AVA A;  3CCR P;  2LIU A;  3B5I A;  2N6Y A;  4GR2 A;  3G4S P;  2KG9 A;  2N5H A;  2MY5 A;  4BPG A;  1EOQ A;  1YJW P;  1KC8 Q;  2FAC A;  4XRO A;  4DG9 A;  1KD1 Q;  3DS5 A;  1HY8 A;  5EJD A;  1M74 A;  2K0X A;  4QNB A;  4F37 A;  2CGQ A;  2L22 A;  2WPT A;  4H2X C;  2PEQ A;  3G26 A;  5JPA A;  2BHV A;  2GZE A;  1YIT P;  1KQS O;  2EG5 A;  7CEI A;  2K5X A;  3CME P;  2JGP A;  2LTE A;  1DNY A;  2BUO A;  2N50 A;  3NTE A;  2KW2 A;  1K9M Q;  2L0Q A;  1RO2 A;  1VQ8 P;  2KGC A;  1BXI A;  2X2B A;  2OTL P;  1Q86 Q;  2FQ0 A;  2XZ0 D;  1QVF O;  3RG6 C;  3G28 A;  1AF8 A;  1ACP A;  2K92 A;  1QRJ A;  4PWV B;  2L9F A;  2K2Q A;  2MVU A;  2AFE A;  1K8A Q;  2KGA A;  2P9X A;  4PXH B;  2MVV A;  2N6Z A;  5KP7 B;  2GDX A;  2L4B A;  3M1M A;  2CG5 B;  5HVC A;  2GYK A;  1VQP P;  2K93 A;  1W2B O;  5HGO A;  1AUM A;  2LF4 A;  3I56 P;  4IPY A;  1BAJ A;  3CCV P;  3I55 P;  1VQL P;  2PEO A;  1DV5 A;  4IZ6 A;  4COP A;  2XT1 A;  1D1D A;  2CNR A;  1GXH A;  1AYI A;  2FQ2 A;  2KWL A;  2GDY A;  3EJD A;  2KG8 A;  4XFZ A;  1K30 A;  1N8R Q;  1M90 Q;  4BPF A;  1NJI Q;  1KLP A;  2FQ1 A;  2JYG A;  2JO0 A;  4H2W C;  1VQ4 P;  3EJB A;  4U0C A;  3RG2 A;  1UJZ A;  3DS2 A;  3GKL C;  2KOO A;  2FVA A;  1VQO P;  3H4E A;  1F80 D;  5HGN A;  2KOD A;  2XV6 A;  2VLQ A;  1S72 P;  2XZ1 C;  1RNI A;  2QNW A;  2L6E A;  2Z45 A;  2NO8 A;  4U0F A;  1K73 Q;  5I4T G;  4M0I A;  3CMA P;  2JU1 A;  1Z6M A;  2OTJ P;  3CD6 P;  3CCM P;  1X3O A;  4U0E A;  3LRY A;  2N5I A;  2OAR A;  3CE7 A;  3WBH A;  2GZJ A;  1JJ2 O;  2N98 A;  2M8L A;  2EIA A;  2JQ4 A;  5HV8 A;  1VQ5 P;  3DPH A;  2JAZ A;  2DGY A;  1YJ9 P;  1A8O A;  1VQ6 P;  4QKO A;  3CC7 P;  2KG6 A;  1Q7Y Q;  1VQ7 P;  3CC2 P;  2MR7 A;  4PH0 A;  3CCU P;  2KGE A;  1OR5 A;  3H47 A;  2EFJ A;  3NY7 B;  1VHN A;  3B4Q A;  3GJN A;  2KOP A;  2MF4 A;  2FVE A;  3CCL P;  2VLN A;  1VQ9 P;  1M6E X;  2JBG A;  1M6N A;  2PEJ A;  2PY8 A;  1A43 A;  1Q82 Q;  2M8N A;  1YIJ P;  3G0V A;  5BS2 A;  3DS1 A;  2EHT A;  3DTJ A;  1L0I A;  2QA4 P;  5F2O A;  1GXG A;  4WYM A;  3E2D A;  3G71 P;  2KGD A;  5HGM A;  2KOS A;  2Z44 A;  3G29 A;  2ROQ A;  1VQN P;  1VKU A;  3CCQ P;  1VQK P;  2GZF A;  2PNG A;  3G1G A;  2JYL A;  2FAE A;  1T8K A;  2JU2 A;  2KR5 A;  4U0D A;  1MZ8 A;  1M1K Q;  2MR8 A;  3MGE A; 
#chains in the Genus database with same CATH homology
 2EHS A;  2LIW A;  2LPK A;  4PWV B;  3GZL A;  2MD9 A;  2XZ1 C;  2DNW A;  2QNW A;  2LOL A;  2L9F A;  4CA3 A;  2K2Q A;  2MVU A;  2AFE A;  2JU1 A;  2KGA A;  4H2Y C;  4PXH B;  3EJE A;  1X3O A;  4MRT C;  2N5I A;  3CE7 A;  2CQ8 A;  2MVV A;  2N6Z A;  4BPH A;  5KP7 B;  2N98 A;  2KOR A;  2GDX A;  2L4B A;  2CG5 B;  5HVC A;  2AVA A;  2JQ4 A;  2LIU A;  5HV8 A;  2N6Y A;  2K93 A;  2KG9 A;  2N5H A;  2MY5 A;  2K0Y A;  4BPG A;  4NEO A;  2AFD A;  2KG6 A;  2FAC A;  2LL8 A;  4DG9 A;  2MR7 A;  1HY8 A;  2VSQ A;  5EJD A;  2KGE A;  2K0X A;  1OR5 A;  1DV5 A;  4IZ6 A;  2CGQ A;  2L22 A;  4H2X C;  2FHS C;  2FAD A;  3NY7 B;  2GDW A;  2KOP A;  2CNR A;  2MF4 A;  2FVE A;  2JGP A;  2LTE A;  2FQ2 A;  1DNY A;  2KWL A;  2GDY A;  5KP6 B;  2N50 A;  3EJD A;  2LKI A;  2KG8 A;  3LMO A;  2AF8 A;  2KW2 A;  1L0H A;  2L0Q A;  2EHT A;  2KGC A;  4BPF A;  4R0M A;  1L0I A;  1HQB A;  2X2B A;  2LML A;  1KLP A;  2FQ1 A;  5CZD B;  2KGD A;  4H2W C;  2KOS A;  2ROQ A;  2FQ0 A;  1VKU A;  3EJB A;  3GZM A;  2XZ0 D;  3RG2 A;  4HKG A;  2KOQ A;  2PNG A;  2KOO A;  2FAE A;  2FVA A;  5KP8 B;  1T8K A;  2JU2 A;  2KR5 A;  1F80 D;  1NQ4 A;  2M5R A;  2MR8 A;  1AF8 A;  2K94 A;  2FVF A;  1ACP A;  2K92 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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