5HVCA

Solution structure of the apo state of the acyl carrier protein from the mlsa2 subunit of the mycolactone polyketide synthase
Total Genus 27
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
95
structure length
95
Chain Sequence
GSHMRLNGLSPQQQQQTLATLVAAATATVLGHHTPESISPATAFKDLGIDSLTALELRNTLTHNTGLDLPPTLIFDHPTPHALTQHLHTRLTQSH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Sticky swinging arm dynamics: studies of an acyl carrier protein domain from the mycolactone polyketide synthase.
pubmed doi rcsb
molecule tags Transferase
source organism Mycobacterium ulcerans
molecule keywords Type I modular polyketide synthase
total genus 27
structure length 95
sequence length 95
ec nomenclature
pdb deposition date 2016-01-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 5hvcA00
2MVVA 2K0XA 2N6ZA 2ROQA 1HQBA 2QNWA 4PXHB 2JGPA 3LMOA 2KW2A 3RG2A 2MD9A 1F80D 2KORA 2KG6A 2KOSA 2FQ1A 2LKIA 2K94A 2XZ1C 2GDYA 2L4BA 2FQ0A 2JU2A 4H2YC 3CE7A 4BPGA 2KWLA 3EJBA 2L0QA 5KP6B 4CA3A 4BPFA 2KOQA 2N5HA 2KGCA 2MR7A 2JU1A 2EHSA 2K92A 2AFEA 5HV8A 2N5IA 2LTEA 2KG9A 3NY7B 5HVCA 2LMLA 2CQ8A 2KG8A 2FVAA 1X3OA 2PNGA 1T8KA 3EJEA 2LIWA 2FVFA 2KR5A 2LL8A 2MF4A 3EJDA 2L22A 4H2XC 2GDWA 2KGAA 2GDXA 4R0MA 4PWVB 2N98A 2FVEA 2MVUA 5KP7B 3GZLA 2X2BA 4HKGA 2LIUA 1DV5A 1OR5A 1L0IA 2DNWA 4H2WC 1AF8A 1VKUA 2FQ2A 2K2QA 2K0YA 3GZMA 5EJDA 2JQ4A 1NQ4A 2FACA 2VSQA 4BPHA 2AVAA 2MR8A 2FADA 2M5RA 2MY5A 2N6YA 2CNRA 1L0HA 2EHTA 2FHSC 2KGEA 2CG5B 5KP8B 1KLPA 4MRTC 2LOLA 4IZ6A 1HY8A 5CZDB 2AFDA 2K93A 2L9FA 2FAEA 2LPKA 2KGDA 4NEOA 2CGQA 2XZ0D 2KOOA 2N50A 1DNYA 2KOPA 2AF8A 1ACPA 4DG9A
chains in the Genus database with same CATH superfamily
4GR6A 4WYMA 3DS4A 2N6ZA 2JGPA 1N8RQ 2PEQA 1W2BO 2VLQA 1RO0A 1F80D 2KORA 3CCQP 2GDYA 1UNKA 1VQMP 3EJBA 3G4SP 3MGEA 5F2NA 1UJZA 1YI2P 2E1MA 2Z45A 2AFEA 5HV8A 2LTEA 2LMLA 3U43A 3G71P 3DS1A 2Z46A 2OTLP 1T8KA 3LRYA 3EJEA 2M8PA 4F37A 2JB0A 3DS3A 3CCMP 1YJWP 1KC8Q 4XROA 4XFXA 2L6EA 2N98A 1IUQA 2FVEA 5BS1A 3GZLA 1YJ9P 2M8LA 1A43A 2PEOA 3B5IA 4H2WC 3H47A 1Q82Q 2JQ4A 1KQSO 5I4TG 3OW2O 1BXIA 1YJNP 4QKOA 2MY5A 3P05A 1ZNVA 1KLPA 3G28A 5HGOA 2GZFA 1VQKP 2VLNA 1VQOP 4U0FA 1EMVA 2JYLA 2ERHA 1VQ6P 1JJ2O 1VQNP 3CCUP 1QVFO 2K0XA 1M6EX 4PXHB 1VQLP 1K8AQ 5DCKA 3H0DA 4H2YC 1IMPA 1VQ5P 2JYGA 2L0QA 2EFJA 1M6NA 2JBGA 5EW5E 5KP6B 4U0DA 2KOQA 4GR2A 1FR2A 2N5IA 2JO0A 3CCVP 2CQ8A 2KG8A 2FVAA 1BAJA 1S72P 3CC4P 5JPAA 2FVFA 2KR5A 2MF4A 3DPHA 2WPTA 4R0MA 4U0CA 3CC2P 4PWVB 2EIAA 1EIAA 5KP7B 1YITP 2X2BA 2PEIA 3HZQA 1AYIA 3CMEP 2DNWA 2K2QA 2K5XA 3G29A 1K9MQ 1VQ8P 2BUOA 2VSQA 2XV6A 2FADA 1VQPP 7CEIA 1L0HA 2CG5B 1M90Q 4MRTC 4IZ6A 2ONTA 1HY8A 2K0DX 2AFDA 2K93A 3CCEP 2FAEA 2LPKA 2Z44A 2CGQA 4PH0A 2XZ0D 2P9XA 2AF8A 2GZGA 1AUMA 2OARA 3CCLP 4DG9A 5F2OA 1HQBA 2QNWA 2KW2A 4COPA 3RG2A 2MD9A 3E2DA 2KOSA 2LKIA 2K94A 3CPWO 2FQ0A 3DS0A 2CWOA 1Q7YQ 4PH1A 3CC7P 2GYKA 1M74A 2EG5A 4QNBA 1A8OA 2NO8A 1YHQP 4BPFA 2KGCA 3DS2A 2MR7A 2JU1A 2PENA 2EHSA 2VLOA 4IPYA 2KG9A 2DGYA 1E0HA 2XT1A 1X3OA 1GXHA 3CCSP 3CMAP 3EJDA 2L22A 3B4QA 4H2XC 4U0EA 2KGAA 2GDXA 1GXGA 1YIJP 3RG6C 4XRQA 2PY8A 4U0BA 1L0IA 2FQ2A 2K0YA 3GZMA 3G0VA 2XXMA 2FACA 1QVGO 3WBHA 3I55P 2N6YA 2PEJA 2CNRA 1VQ7P 2EHTA 2PEKA 2FHSC 2KGEA 2QEXP 3CCRP 5HGMA 5KP8B 3G21A 2JAZA 2VLPA 5CZDB 2KGDA 5HGNA 1GPJA 2LF4A 3VRLC 2PEMA 3M1MA 2KOOA 2N50A 2KOPA 1ACPA 2MVVA 3NTEA 4XFYA 2ROQA 3LMOA 1MZ8A 1RNIA 1ZMBA 3HYBA 4COCA 2GZIA 3CXCO 2KG6A 5F2KA 3GKLC 2FQ1A 2XZ1C 2L4BA 2JU2A 2M8NA 5BS2A 3CE7A 4BPGA 2KWLA 3GJNA 3Q20A 3I56P 2BHVA 1QRJA 4CA3A 2N5HA 1NJIQ 1D1DA 3CD6P 2K92A 3NY7B 4XFZA 5HVCA 3DTJA 3CCJP 3DS5A 1K30A 2PNGA 2LIWA 2QA4P 2LL8A 1M1KQ 1E6JP 3H4EA 2GDWA 1VQ4P 1EOQA 4U0AA 2GZEA 4UHPB 2MVUA 4HKGA 2LIUA 3G1GA 1DV5A 1OR5A 1AF8A 1VKUA 1CEIA 1VHNA 5EJDA 5HGLA 1NQ4A 3G1IA 2GZJA 2AVAA 4M0IA 2MR8A 4BPHA 2M5RA 3G26A 1K73Q 1Q81Q 1Z6MA 1RO2A 1Q86Q 1VQ9P 2LOLA 3G6EP 2KODA 2L9FA 4NEOA 1IMQA 2OTJP 1DNYA 1KD1Q
chains in the Genus database with same CATH topology
2MVVA 2K0XA 2N6ZA 2ROQA 1HQBA 2QNWA 4PXHB 2JGPA 3LMOA 2KW2A 3RG2A 2MD9A 1F80D 2KORA 2KG6A 2KOSA 2FQ1A 2LKIA 2K94A 2XZ1C 2GDYA 2L4BA 2FQ0A 2JU2A 4H2YC 3CE7A 4BPGA 2KWLA 3EJBA 2L0QA 5KP6B 4CA3A 4BPFA 2KOQA 2N5HA 2KGCA 2MR7A 2JU1A 2EHSA 2K92A 2AFEA 5HV8A 2N5IA 2LTEA 2KG9A 3NY7B 5HVCA 2LMLA 2CQ8A 2KG8A 2FVAA 1X3OA 2PNGA 1T8KA 3EJEA 2LIWA 2FVFA 2KR5A 2LL8A 2MF4A 3EJDA 2L22A 4H2XC 2GDWA 2KGAA 2GDXA 4R0MA 4PWVB 2N98A 2FVEA 2MVUA 5KP7B 3GZLA 2X2BA 4HKGA 2LIUA 1DV5A 1OR5A 1L0IA 2DNWA 4H2WC 1AF8A 1VKUA 2FQ2A 2K2QA 2K0YA 3GZMA 5EJDA 2JQ4A 1NQ4A 2FACA 2VSQA 4BPHA 2AVAA 2MR8A 2FADA 2M5RA 2MY5A 2N6YA 2CNRA 1L0HA 2EHTA 2FHSC 2KGEA 2CG5B 5KP8B 1KLPA 4MRTC 2LOLA 4IZ6A 1HY8A 5CZDB 2AFDA 2K93A 2L9FA 2FAEA 2LPKA 2KGDA 4NEOA 2CGQA 2XZ0D 2KOOA 2N50A 1DNYA 2KOPA 2AF8A 1ACPA 4DG9A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2MVV A;  2K0X A;  2N6Z A;  2ROQ A;  1HQB A;  2QNW A;  4PXH B;  2JGP A;  3LMO A;  2KW2 A;  3RG2 A;  2MD9 A;  1F80 D;  2KOR A;  2KG6 A;  2KOS A;  2FQ1 A;  2LKI A;  2K94 A;  2XZ1 C;  2GDY A;  2L4B A;  2FQ0 A;  2JU2 A;  4H2Y C;  3CE7 A;  4BPG A;  2KWL A;  3EJB A;  2L0Q A;  5KP6 B;  4CA3 A;  4BPF A;  2KOQ A;  2N5H A;  2KGC A;  2MR7 A;  2JU1 A;  2EHS A;  2K92 A;  2AFE A;  5HV8 A;  2N5I A;  2LTE A;  2KG9 A;  3NY7 B;  5HVC A;  2LML A;  2CQ8 A;  2KG8 A;  2FVA A;  1X3O A;  2PNG A;  1T8K A;  3EJE A;  2LIW A;  2FVF A;  2KR5 A;  2LL8 A;  2MF4 A;  3EJD A;  2L22 A;  4H2X C;  2GDW A;  2KGA A;  2GDX A;  4R0M A;  4PWV B;  2N98 A;  2FVE A;  2MVU A;  5KP7 B;  3GZL A;  2X2B A;  4HKG A;  2LIU A;  1DV5 A;  1OR5 A;  1L0I A;  2DNW A;  4H2W C;  1AF8 A;  1VKU A;  2FQ2 A;  2K2Q A;  2K0Y A;  3GZM A;  5EJD A;  2JQ4 A;  1NQ4 A;  2FAC A;  2VSQ A;  4BPH A;  2AVA A;  2MR8 A;  2FAD A;  2M5R A;  2MY5 A;  2N6Y A;  2CNR A;  1L0H A;  2EHT A;  2FHS C;  2KGE A;  2CG5 B;  5KP8 B;  1KLP A;  4MRT C;  2LOL A;  4IZ6 A;  1HY8 A;  5CZD B;  2AFD A;  2K93 A;  2L9F A;  2FAE A;  2LPK A;  2KGD A;  4NEO A;  2CGQ A;  2XZ0 D;  2KOO A;  2N50 A;  1DNY A;  2KOP A;  2AF8 A;  1ACP A;  4DG9 A; 
#chains in the Genus database with same CATH topology
 4GR6 A;  4WYM A;  3DS4 A;  2N6Z A;  2JGP A;  1N8R Q;  2PEQ A;  1W2B O;  2VLQ A;  1RO0 A;  1F80 D;  2KOR A;  3CCQ P;  2GDY A;  1UNK A;  1VQM P;  3EJB A;  3G4S P;  3MGE A;  5F2N A;  1UJZ A;  1YI2 P;  2E1M A;  2Z45 A;  2AFE A;  5HV8 A;  2LTE A;  2LML A;  3U43 A;  3G71 P;  3DS1 A;  2Z46 A;  2OTL P;  1T8K A;  3LRY A;  3EJE A;  2M8P A;  4F37 A;  2JB0 A;  3DS3 A;  3CCM P;  1YJW P;  1KC8 Q;  4XRO A;  4XFX A;  2L6E A;  2N98 A;  1IUQ A;  2FVE A;  5BS1 A;  3GZL A;  1YJ9 P;  2M8L A;  1A43 A;  2PEO A;  3B5I A;  4H2W C;  3H47 A;  1Q82 Q;  2JQ4 A;  1KQS O;  5I4T G;  3OW2 O;  1BXI A;  1YJN P;  4QKO A;  2MY5 A;  3P05 A;  1ZNV A;  1KLP A;  3G28 A;  5HGO A;  2GZF A;  1VQK P;  2VLN A;  1VQO P;  4U0F A;  1EMV A;  2JYL A;  2ERH A;  1VQ6 P;  1JJ2 O;  1VQN P;  3CCU P;  1QVF O;  2K0X A;  1M6E X;  4PXH B;  1VQL P;  1K8A Q;  5DCK A;  3H0D A;  4H2Y C;  1IMP A;  1VQ5 P;  2JYG A;  2L0Q A;  2EFJ A;  1M6N A;  2JBG A;  5EW5 E;  5KP6 B;  4U0D A;  2KOQ A;  4GR2 A;  1FR2 A;  2N5I A;  2JO0 A;  3CCV P;  2CQ8 A;  2KG8 A;  2FVA A;  1BAJ A;  1S72 P;  3CC4 P;  5JPA A;  2FVF A;  2KR5 A;  2MF4 A;  3DPH A;  2WPT A;  4R0M A;  4U0C A;  3CC2 P;  4PWV B;  2EIA A;  1EIA A;  5KP7 B;  1YIT P;  2X2B A;  2PEI A;  3HZQ A;  1AYI A;  3CME P;  2DNW A;  2K2Q A;  2K5X A;  3G29 A;  1K9M Q;  1VQ8 P;  2BUO A;  2VSQ A;  2XV6 A;  2FAD A;  1VQP P;  7CEI A;  1L0H A;  2CG5 B;  1M90 Q;  4MRT C;  4IZ6 A;  2ONT A;  1HY8 A;  2K0D X;  2AFD A;  2K93 A;  3CCE P;  2FAE A;  2LPK A;  2Z44 A;  2CGQ A;  4PH0 A;  2XZ0 D;  2P9X A;  2AF8 A;  2GZG A;  1AUM A;  2OAR A;  3CCL P;  4DG9 A;  5F2O A;  1HQB A;  2QNW A;  2KW2 A;  4COP A;  3RG2 A;  2MD9 A;  3E2D A;  2KOS A;  2LKI A;  2K94 A;  3CPW O;  2FQ0 A;  3DS0 A;  2CWO A;  1Q7Y Q;  4PH1 A;  3CC7 P;  2GYK A;  1M74 A;  2EG5 A;  4QNB A;  1A8O A;  2NO8 A;  1YHQ P;  4BPF A;  2KGC A;  3DS2 A;  2MR7 A;  2JU1 A;  2PEN A;  2EHS A;  2VLO A;  4IPY A;  2KG9 A;  2DGY A;  1E0H A;  2XT1 A;  1X3O A;  1GXH A;  3CCS P;  3CMA P;  3EJD A;  2L22 A;  3B4Q A;  4H2X C;  4U0E A;  2KGA A;  2GDX A;  1GXG A;  1YIJ P;  3RG6 C;  4XRQ A;  2PY8 A;  4U0B A;  1L0I A;  2FQ2 A;  2K0Y A;  3GZM A;  3G0V A;  2XXM A;  2FAC A;  1QVG O;  3WBH A;  3I55 P;  2N6Y A;  2PEJ A;  2CNR A;  1VQ7 P;  2EHT A;  2PEK A;  2FHS C;  2KGE A;  2QEX P;  3CCR P;  5HGM A;  5KP8 B;  3G21 A;  2JAZ A;  2VLP A;  5CZD B;  2KGD A;  5HGN A;  1GPJ A;  2LF4 A;  3VRL C;  2PEM A;  3M1M A;  2KOO A;  2N50 A;  2KOP A;  1ACP A;  2MVV A;  3NTE A;  4XFY A;  2ROQ A;  3LMO A;  1MZ8 A;  1RNI A;  1ZMB A;  3HYB A;  4COC A;  2GZI A;  3CXC O;  2KG6 A;  5F2K A;  3GKL C;  2FQ1 A;  2XZ1 C;  2L4B A;  2JU2 A;  2M8N A;  5BS2 A;  3CE7 A;  4BPG A;  2KWL A;  3GJN A;  3Q20 A;  3I56 P;  2BHV A;  1QRJ A;  4CA3 A;  2N5H A;  1NJI Q;  1D1D A;  3CD6 P;  2K92 A;  3NY7 B;  4XFZ A;  5HVC A;  3DTJ A;  3CCJ P;  3DS5 A;  1K30 A;  2PNG A;  2LIW A;  2QA4 P;  2LL8 A;  1M1K Q;  1E6J P;  3H4E A;  2GDW A;  1VQ4 P;  1EOQ A;  4U0A A;  2GZE A;  4UHP B;  2MVU A;  4HKG A;  2LIU A;  3G1G A;  1DV5 A;  1OR5 A;  1AF8 A;  1VKU A;  1CEI A;  1VHN A;  5EJD A;  5HGL A;  1NQ4 A;  3G1I A;  2GZJ A;  2AVA A;  4M0I A;  2MR8 A;  4BPH A;  2M5R A;  3G26 A;  1K73 Q;  1Q81 Q;  1Z6M A;  1RO2 A;  1Q86 Q;  1VQ9 P;  2LOL A;  3G6E P;  2KOD A;  2L9F A;  4NEO A;  1IMQ A;  2OTJ P;  1DNY A;  1KD1 Q; 
#chains in the Genus database with same CATH homology
 2MVV A;  2K0X A;  2N6Z A;  2ROQ A;  1HQB A;  2QNW A;  4PXH B;  2JGP A;  3LMO A;  2KW2 A;  3RG2 A;  2MD9 A;  1F80 D;  2KOR A;  2KG6 A;  2KOS A;  2FQ1 A;  2LKI A;  2K94 A;  2XZ1 C;  2GDY A;  2L4B A;  2FQ0 A;  2JU2 A;  4H2Y C;  3CE7 A;  4BPG A;  2KWL A;  3EJB A;  2L0Q A;  5KP6 B;  4CA3 A;  4BPF A;  2KOQ A;  2N5H A;  2KGC A;  2MR7 A;  2JU1 A;  2EHS A;  2K92 A;  2AFE A;  5HV8 A;  2N5I A;  2LTE A;  2KG9 A;  3NY7 B;  5HVC A;  2LML A;  2CQ8 A;  2KG8 A;  2FVA A;  1X3O A;  2PNG A;  1T8K A;  3EJE A;  2LIW A;  2FVF A;  2KR5 A;  2LL8 A;  2MF4 A;  3EJD A;  2L22 A;  4H2X C;  2GDW A;  2KGA A;  2GDX A;  4R0M A;  4PWV B;  2N98 A;  2FVE A;  2MVU A;  5KP7 B;  3GZL A;  2X2B A;  4HKG A;  2LIU A;  1DV5 A;  1OR5 A;  1L0I A;  2DNW A;  4H2W C;  1AF8 A;  1VKU A;  2FQ2 A;  2K2Q A;  2K0Y A;  3GZM A;  5EJD A;  2JQ4 A;  1NQ4 A;  2FAC A;  2VSQ A;  4BPH A;  2AVA A;  2MR8 A;  2FAD A;  2M5R A;  2MY5 A;  2N6Y A;  2CNR A;  1L0H A;  2EHT A;  2FHS C;  2KGE A;  2CG5 B;  5KP8 B;  1KLP A;  4MRT C;  2LOL A;  4IZ6 A;  1HY8 A;  5CZD B;  2AFD A;  2K93 A;  2L9F A;  2FAE A;  2LPK A;  2KGD A;  4NEO A;  2CGQ A;  2XZ0 D;  2KOO A;  2N50 A;  1DNY A;  2KOP A;  2AF8 A;  1ACP A;  4DG9 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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