1IMPA

Colicin e9 immunity protein im9, nmr, 21 structures
Total Genus 21
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
21
sequence length
86
structure length
86
Chain Sequence
MELKHSISDYTEAEFLQLVTTICNADTSSEEELVKLVTHFEEMTEHPSGSDLIYYPKEGDDDSPSGIVNTVKQWRAANGKSGFKQG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Bacteriocin
molecule keywords IM9
publication title Three-dimensional solution structure and 13C nuclear magnetic resonance assignments of the colicin E9 immunity protein Im9.
pubmed doi rcsb
total genus 21
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 1996-05-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01320 Colicin_Pyocin Colicin immunity protein / pyocin immunity protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.20 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A Colicin E immunity protein 1impA00
1FR2A 2ERHA 2GZJA 4UHPB 2K5XA 1AYIA 2VLPA 1IMPA 1UNKA 1IMQA 1UJZA 7CEIA 2GZEA 2VLQA 5EW5E 2GZGA 1GXGA 3GJNA 1ZNVA 1EMVA 2VLOA 1MZ8A 3GKLC 1GXHA 2GYKA 2NO8A 2JAZA 3U43A 2K0DX 4F37A 2WPTA 4QKOA 1CEIA 1BXIA 2JB0A 2GZFA 1E0HA 2JBGA 2GZIA 2VLNA
chains in the Genus database with same CATH superfamily
2JU2A 2P9XA 4CA3A 1YJ9P 3H4EA 3EJBA 4XFYA 3HZQA 4GR6A 4U0DA 2JYLA 2N6ZA 1Q86Q 2X2BA 2GDYA 2Z44A 2CQ8A 2KODA 3M1MA 2K0DX 5BS2A 2EIAA 1YJNP 2M5RA 3I56P 2JQ4A 2OTJP 1X3OA 2PEMA 4H2XC 3DS1A 4BPGA 1EMVA 3G1GA 4XROA 2FQ0A 4F37A 5KP7B 3G26A 2VLNA 3RG6C 1OR5A 5F2KA 1Q7YQ 1NJIQ 3CC7P 1IMQA 3OW2O 3B4QA 5HGOA 3CC2P 2OARA 2CWOA 2BUOA 3CE7A 1E6JP 2GZFA 2JBGA 1VQNP 2FHSC 2DNWA 4IPYA 2ERHA 2GDWA 2KWLA 3CCUP 7CEIA 1M6EX 2GZEA 1IUQA 2N50A 4U0EA 2XT1A 2KOQA 2CG5B 2JYGA 2AFEA 2FQ1A 2ONTA 2NO8A 4NEOA 2LKIA 2KGAA 4GR2A 3CCMP 2JB0A 1HQBA 2LF4A 2GZIA 1KQSO 2KORA 1DV5A 2QNWA 1A43A 2KR5A 4U0CA 2GDXA 3DTJA 2MD9A 2AFDA 2E1MA 5HV8A 3CMEP 2DGYA 2VSQA 4U0FA 2GZGA 1GXGA 2L4BA 4BPFA 2EG5A 2N5HA 2LTEA 3H0DA 2PEIA 1CEIA 4PH1A 3RG2A 3CCJP 4PH0A 2EHSA 1AUMA 2M8NA 4COCA 3G29A 2PNGA 1F80D 1VKUA 3EJEA 2LIWA 2GYKA 2K93A 4DG9A 2KW2A 1BXIA 2XZ1C 2M8LA 4COPA 4QNBA 5KP8B 1Q82Q 1N8RQ 4XFZA 1DNYA 3WBHA 1YITP 4XRQA 3I55P 3NTEA 2BHVA 2EFJA 2KOPA 5EW5E 3CMAP 1AF8A 4BPHA 2M8PA 1W2BO 2K0XA 1RO2A 1Z6MA 1K9MQ 1VQ6P 2ROQA 1YIJP 2KGCA 3NY7B 1EIAA 2KG9A 4U0AA 5BS1A 3DS4A 3GKLC 3CCSP 2OTLP 3GZMA 1K73Q 1VQ8P 5KP6B 1T8KA 2PY8A 1VQ5P 2PEJA 1KD1Q 2FVFA 2KOSA 2QA4P 4MRTC 3B5IA 2L0QA 1KC8Q 1D1DA 1L0HA 1VHNA 2K0YA 4XFXA 2PEQA 1HY8A 1Q81Q 2EHTA 2MVUA 1QVGO 2FADA 5HGNA 2MR7A 2CGQA 1AYIA 1UNKA 1UJZA 2LIUA 1VQKP 3CC4P 3G71P 2MR8A 1YI2P 4PWVB 1MZ8A 2JU1A 2JO0A 2AF8A 4H2WC 4HKGA 3CCRP 3VRLC 3CCLP 1ZMBA 3G0VA 3DS5A 1VQOP 2QEXP 3G1IA 1QRJA 3CCQP 2N98A 2VLQA 3CCEP 2LOLA 2VLOA 2FQ2A 3Q20A 3DS2A 2JAZA 1VQLP 2L9FA 3LRYA 1VQ4P 5DCKA 4PXHB 1A8OA 2LPKA 3H47A 3CCVP 1NQ4A 2Z45A 3G6EP 2MF4A 1YHQP 2N6YA 3E2DA 2K5XA 2Z46A 3CXCO 3P05A 3DS3A 3G4SP 1ZNVA 1M1KQ 4M0IA 3CPWO 1VQPP 2PEKA 3G28A 3U43A 2PEOA 2WPTA 2LL8A 1E0HA 2KGEA 4R0MA 1L0IA 2K92A 2GZJA 4H2YC 1K30A 4WYMA 5HVCA 1M6NA 5HGLA 2XV6A 3DS0A 2FVEA 5CZDB 1VQ9P 1QVFO 3MGEA 4IZ6A 2LMLA 5I4TG 1K8AQ 2AVAA 1KLPA 1M90Q 4UHPB 5F2OA 3CD6P 1IMPA 2CNRA 1BAJA 4U0BA 2FACA 2L22A 1M74A 2FVAA 2KGDA 2K94A 1VQ7P 2JGPA 1ACPA 1RO0A 1RNIA 3GJNA 1GPJA 1EOQA 1JJ2O 3GZLA 1GXHA 2MVVA 3HYBA 2XXMA 2FAEA 5EJDA 4QKOA 3G21A 1VQMP 1FR2A 2VLPA 5HGMA 3DPHA 2K2QA 3LMOA 2L6EA 2MY5A 5JPAA 1S72P 3EJDA 2PENA 2KOOA 2KG6A 1YJWP 2XZ0D 2KG8A 2N5IA 5F2NA
chains in the Genus database with same CATH topology
1FR2A 2ERHA 2GZJA 4UHPB 2K5XA 1AYIA 2VLPA 1IMPA 1UNKA 1IMQA 1UJZA 7CEIA 2GZEA 2VLQA 5EW5E 2GZGA 1GXGA 3GJNA 1ZNVA 1EMVA 2VLOA 1MZ8A 3GKLC 1GXHA 2GYKA 2NO8A 2JAZA 3U43A 2K0DX 4F37A 2WPTA 4QKOA 1CEIA 1BXIA 2JB0A 2GZFA 1E0HA 2JBGA 2GZIA 2VLNA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1FR2 A;  2ERH A;  2GZJ A;  4UHP B;  2K5X A;  1AYI A;  2VLP A;  1IMP A;  1UNK A;  1IMQ A;  1UJZ A;  7CEI A;  2GZE A;  2VLQ A;  5EW5 E;  2GZG A;  1GXG A;  3GJN A;  1ZNV A;  1EMV A;  2VLO A;  1MZ8 A;  3GKL C;  1GXH A;  2GYK A;  2NO8 A;  2JAZ A;  3U43 A;  2K0D X;  4F37 A;  2WPT A;  4QKO A;  1CEI A;  1BXI A;  2JB0 A;  2GZF A;  1E0H A;  2JBG A;  2GZI A;  2VLN A; 
#chains in the Genus database with same CATH topology
 2JU2 A;  2P9X A;  4CA3 A;  1YJ9 P;  3H4E A;  3EJB A;  4XFY A;  3HZQ A;  4GR6 A;  4U0D A;  2JYL A;  2N6Z A;  1Q86 Q;  2X2B A;  2GDY A;  2Z44 A;  2CQ8 A;  2KOD A;  3M1M A;  2K0D X;  5BS2 A;  2EIA A;  1YJN P;  2M5R A;  3I56 P;  2JQ4 A;  2OTJ P;  1X3O A;  2PEM A;  4H2X C;  3DS1 A;  4BPG A;  1EMV A;  3G1G A;  4XRO A;  2FQ0 A;  4F37 A;  5KP7 B;  3G26 A;  2VLN A;  3RG6 C;  1OR5 A;  5F2K A;  1Q7Y Q;  1NJI Q;  3CC7 P;  1IMQ A;  3OW2 O;  3B4Q A;  5HGO A;  3CC2 P;  2OAR A;  2CWO A;  2BUO A;  3CE7 A;  1E6J P;  2GZF A;  2JBG A;  1VQN P;  2FHS C;  2DNW A;  4IPY A;  2ERH A;  2GDW A;  2KWL A;  3CCU P;  7CEI A;  1M6E X;  2GZE A;  1IUQ A;  2N50 A;  4U0E A;  2XT1 A;  2KOQ A;  2CG5 B;  2JYG A;  2AFE A;  2FQ1 A;  2ONT A;  2NO8 A;  4NEO A;  2LKI A;  2KGA A;  4GR2 A;  3CCM P;  2JB0 A;  1HQB A;  2LF4 A;  2GZI A;  1KQS O;  2KOR A;  1DV5 A;  2QNW A;  1A43 A;  2KR5 A;  4U0C A;  2GDX A;  3DTJ A;  2MD9 A;  2AFD A;  2E1M A;  5HV8 A;  3CME P;  2DGY A;  2VSQ A;  4U0F A;  2GZG A;  1GXG A;  2L4B A;  4BPF A;  2EG5 A;  2N5H A;  2LTE A;  3H0D A;  2PEI A;  1CEI A;  4PH1 A;  3RG2 A;  3CCJ P;  4PH0 A;  2EHS A;  1AUM A;  2M8N A;  4COC A;  3G29 A;  2PNG A;  1F80 D;  1VKU A;  3EJE A;  2LIW A;  2GYK A;  2K93 A;  4DG9 A;  2KW2 A;  1BXI A;  2XZ1 C;  2M8L A;  4COP A;  4QNB A;  5KP8 B;  1Q82 Q;  1N8R Q;  4XFZ A;  1DNY A;  3WBH A;  1YIT P;  4XRQ A;  3I55 P;  3NTE A;  2BHV A;  2EFJ A;  2KOP A;  5EW5 E;  3CMA P;  1AF8 A;  4BPH A;  2M8P A;  1W2B O;  2K0X A;  1RO2 A;  1Z6M A;  1K9M Q;  1VQ6 P;  2ROQ A;  1YIJ P;  2KGC A;  3NY7 B;  1EIA A;  2KG9 A;  4U0A A;  5BS1 A;  3DS4 A;  3GKL C;  3CCS P;  2OTL P;  3GZM A;  1K73 Q;  1VQ8 P;  5KP6 B;  1T8K A;  2PY8 A;  1VQ5 P;  2PEJ A;  1KD1 Q;  2FVF A;  2KOS A;  2QA4 P;  4MRT C;  3B5I A;  2L0Q A;  1KC8 Q;  1D1D A;  1L0H A;  1VHN A;  2K0Y A;  4XFX A;  2PEQ A;  1HY8 A;  1Q81 Q;  2EHT A;  2MVU A;  1QVG O;  2FAD A;  5HGN A;  2MR7 A;  2CGQ A;  1AYI A;  1UNK A;  1UJZ A;  2LIU A;  1VQK P;  3CC4 P;  3G71 P;  2MR8 A;  1YI2 P;  4PWV B;  1MZ8 A;  2JU1 A;  2JO0 A;  2AF8 A;  4H2W C;  4HKG A;  3CCR P;  3VRL C;  3CCL P;  1ZMB A;  3G0V A;  3DS5 A;  1VQO P;  2QEX P;  3G1I A;  1QRJ A;  3CCQ P;  2N98 A;  2VLQ A;  3CCE P;  2LOL A;  2VLO A;  2FQ2 A;  3Q20 A;  3DS2 A;  2JAZ A;  1VQL P;  2L9F A;  3LRY A;  1VQ4 P;  5DCK A;  4PXH B;  1A8O A;  2LPK A;  3H47 A;  3CCV P;  1NQ4 A;  2Z45 A;  3G6E P;  2MF4 A;  1YHQ P;  2N6Y A;  3E2D A;  2K5X A;  2Z46 A;  3CXC O;  3P05 A;  3DS3 A;  3G4S P;  1ZNV A;  1M1K Q;  4M0I A;  3CPW O;  1VQP P;  2PEK A;  3G28 A;  3U43 A;  2PEO A;  2WPT A;  2LL8 A;  1E0H A;  2KGE A;  4R0M A;  1L0I A;  2K92 A;  2GZJ A;  4H2Y C;  1K30 A;  4WYM A;  5HVC A;  1M6N A;  5HGL A;  2XV6 A;  3DS0 A;  2FVE A;  5CZD B;  1VQ9 P;  1QVF O;  3MGE A;  4IZ6 A;  2LML A;  5I4T G;  1K8A Q;  2AVA A;  1KLP A;  1M90 Q;  4UHP B;  5F2O A;  3CD6 P;  1IMP A;  2CNR A;  1BAJ A;  4U0B A;  2FAC A;  2L22 A;  1M74 A;  2FVA A;  2KGD A;  2K94 A;  1VQ7 P;  2JGP A;  1ACP A;  1RO0 A;  1RNI A;  3GJN A;  1GPJ A;  1EOQ A;  1JJ2 O;  3GZL A;  1GXH A;  2MVV A;  3HYB A;  2XXM A;  2FAE A;  5EJD A;  4QKO A;  3G21 A;  1VQM P;  1FR2 A;  2VLP A;  5HGM A;  3DPH A;  2K2Q A;  3LMO A;  2L6E A;  2MY5 A;  5JPA A;  1S72 P;  3EJD A;  2PEN A;  2KOO A;  2KG6 A;  1YJW P;  2XZ0 D;  2KG8 A;  2N5I A;  5F2N A; 
#chains in the Genus database with same CATH homology
 1FR2 A;  2ERH A;  2GZJ A;  4UHP B;  2K5X A;  1AYI A;  2VLP A;  1IMP A;  1UNK A;  1IMQ A;  1UJZ A;  7CEI A;  2GZE A;  2VLQ A;  5EW5 E;  2GZG A;  1GXG A;  3GJN A;  1ZNV A;  1EMV A;  2VLO A;  1MZ8 A;  3GKL C;  1GXH A;  2GYK A;  2NO8 A;  2JAZ A;  3U43 A;  2K0D X;  4F37 A;  2WPT A;  4QKO A;  1CEI A;  1BXI A;  2JB0 A;  2GZF A;  1E0H A;  2JBG A;  2GZI A;  2VLN A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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