2KGEA

Nmr solution structures of 3,5-dioxohexyl acp (a triketide mimic) from the actinorhodin polyketide synthase in streptomyces coelicolor
Total Genus 22
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
22
sequence length
86
structure length
86
Chain Sequence
MATLLTTDDLRRALVESAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Actinorhodin polyketide synthase acyl carrier protein
publication title Probing the Interactions of Early Polyketide Intermediates with the Actinorhodin ACP from S. coelicolor A3(2).
pubmed doi rcsb
source organism Streptomyces coelicolor
molecule tags Biosynthetic protein
total genus 22
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 2009-03-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2kgeA00
1AF8A 3EJBA 2LMLA 2PNGA 2FQ1A 2KG9A 3RG2A 2N50A 2LIUA 4H2WC 1DNYA 2KGCA 4H2YC 2FACA 2K94A 2FADA 2L9FA 2MD9A 2VSQA 5EJDA 2KORA 2L4BA 2CGQA 3NY7B 2LKIA 1HY8A 4BPHA 4NEOA 4PWVB 2K93A 2XZ1C 2CNRA 2KG6A 2MR7A 2KR5A 1T8KA 2K0YA 2FVEA 3LMOA 2AFDA 3GZMA 5HV8A 2LTEA 2LL8A 2CG5B 2FHSC 2FQ2A 4PXHB 1ACPA 3EJDA 1NQ4A 4CA3A 2GDWA 2KG8A 3EJEA 2KOQA 1OR5A 2N6YA 1L0HA 2MY5A 1F80D 5KP8B 2MR8A 2KGEA 4BPFA 2N5HA 1DV5A 2M5RA 4IZ6A 5KP7B 2ROQA 3GZLA 2LIWA 3CE7A 2DNWA 2FQ0A 2N6ZA 2CQ8A 2XZ0D 2KGAA 2GDYA 2X2BA 4MRTC 2QNWA 5HVCA 4H2XC 4DG9A 2JU2A 2EHTA 2EHSA 2L22A 5KP6B 2K92A 2FVFA 2MF4A 2MVUA 2KOSA 2AFEA 2L0QA 2KWLA 4HKGA 2AVAA 2AF8A 2LPKA 2FAEA 2JQ4A 2KOOA 2JGPA 2K0XA 2LOLA 1X3OA 1HQBA 2MVVA 4BPGA 2KOPA 1L0IA 2JU1A 1KLPA 1VKUA 5CZDB 2FVAA 2N5IA 2GDXA 4R0MA 2K2QA 2KW2A 2KGDA 2N98A
chains in the Genus database with same CATH superfamily
3G1IA 2JBGA 2LMLA 2PNGA 2LIUA 2E1MA 2PEIA 3VRLC 2FACA 2L9FA 1Q81Q 2CGQA 1HY8A 4BPHA 3CD6P 2K0DX 2FVEA 2AFDA 3GZMA 5HV8A 5JPAA 2L6EA 1VHNA 2FQ2A 2PEJA 1EIAA 3H4EA 1M90Q 4CA3A 2GDWA 5HGLA 2OTJP 3EJEA 2N6YA 3E2DA 2MR8A 1EMVA 3RG6C 2OTLP 4XFZA 1UJZA 1K30A 2KODA 2QNWA 7CEIA 3CC4P 3OW2O 1QRJA 1VQ9P 1N8RQ 2K5XA 2K92A 1IMPA 2MVUA 2AVAA 1Q82Q 1K8AQ 3CCRP 1QVGO 1K73Q 3CCEP 2WPTA 2KOOA 4GR2A 2KOPA 1VKUA 2GDXA 4R0MA 2KW2A 2PEOA 1ZNVA 1AF8A 4PH1A 2PEMA 1AYIA 1MZ8A 2KG9A 3G29A 3Q20A 2ONTA 3P05A 4COPA 1KQSO 4H2YC 2FADA 5EJDA 2KORA 2L4BA 2NO8A 2K93A 1YJNP 2KG6A 1T8KA 2K0YA 1E0HA 3G21A 2CG5B 2Z44A 2VLOA 1VQOP 4PXHB 1K9MQ 3EJDA 2JAZA 3CC2P 1OR5A 1L0HA 1VQMP 2DGYA 3DPHA 3B5IA 5KP8B 2KGEA 2N5HA 3CCSP 2QEXP 3DS1A 4IZ6A 3GZLA 1VQLP 3HYBA 3CE7A 2FQ0A 2N6ZA 2XZ0D 1A43A 3I56P 2KGAA 2X2BA 4H2XC 1VQNP 3CCJP 3CMEP 2EHTA 1FR2A 1RO0A 1UNKA 3GKLC 2FVFA 5DCKA 4F37A 2M8NA 2KOSA 3LRYA 1M74A 2AFEA 1QVFO 2KWLA 3CXCO 3DS3A 3H0DA 5BS1A 1Q86Q 4U0AA 2K0XA 2EIAA 1X3OA 1HQBA 2MVVA 3CCQP 1L0IA 1S72P 4U0EA 3G28A 5CZDB 2N5IA 1VQPP 5F2NA 4COCA 2GZFA 1NJIQ 2K2QA 3DS0A 3M1MA 2EFJA 3DS2A 1M1KQ 1GXHA 2PEQA 2FQ1A 1VQ4P 3RG2A 2K94A 2LKIA 4NEOA 3CPWO 4PWVB 1IUQA 1IMQA 2CNRA 3MGEA 3WBHA 1BAJA 4XFYA 1AUMA 2KR5A 4U0FA 2EG5A 1M6EX 4U0DA 2LTEA 1KD1Q 2FHSC 4XROA 1KC8Q 4XFXA 3CC7P 3CCUP 2KG8A 4QNBA 3G71P 2ERHA 2LF4A 2MY5A 1F80D 4PH0A 4IPYA 2VLNA 1W2BO 1DV5A 3H47A 2XT1A 2LIWA 2GZIA 1ZMBA 1YHQP 5HGOA 2P9XA 4MRTC 5HVCA 1GPJA 4DG9A 4U0CA 2JU2A 5F2OA 4M0IA 3HZQA 2PEKA 3G0VA 2CWOA 3G1GA 5HGMA 2VLQA 2GYKA 2GZEA 2AF8A 1GXGA 2LPKA 2FAEA 2JQ4A 3NTEA 1M6NA 4UHPB 1YI2P 1D1DA 3CCLP 2N98A 1YITP 1EOQA 2Z45A 3EJBA 2JO0A 5BS2A 2N50A 1VQ8P 3GJNA 4H2WC 1DNYA 2KGCA 2BUOA 1RO2A 2MD9A 2VSQA 3B4QA 3NY7B 1YJWP 5EW5E 2XZ1C 2PY8A 2GZJA 2GZGA 2MR7A 4GR6A 3DS4A 2JYGA 3LMOA 2Z46A 4QKOA 1Q7YQ 2LL8A 3I55P 2BHVA 1E6JP 3G26A 1RNIA 1ACPA 1NQ4A 1VQ7P 3U43A 2KOQA 1Z6MA 1YJ9P 4BPFA 3CCVP 3DTJA 2PENA 3DS5A 2M5RA 5KP7B 2ROQA 1CEIA 3G6EP 3CCMP 2DNWA 1VQ5P 2XXMA 2CQ8A 1BXIA 2QA4P 4U0BA 4XRQA 2GDYA 3CMAP 3G4SP 2JB0A 2JYLA 5F2KA 2EHSA 4WYMA 2L22A 5KP6B 5I4TG 2M8PA 2MF4A 2XV6A 1JJ2O 2L0QA 4HKGA 2VLPA 1VQKP 1YIJP 2JGPA 1VQ6P 2LOLA 1A8OA 4BPGA 2JU1A 5HGNA 2OARA 1KLPA 2FVAA 2M8LA 2KGDA
chains in the Genus database with same CATH topology
1AF8A 3EJBA 2LMLA 2PNGA 2FQ1A 2KG9A 3RG2A 2N50A 2LIUA 4H2WC 1DNYA 2KGCA 4H2YC 2FACA 2K94A 2FADA 2L9FA 2MD9A 2VSQA 5EJDA 2KORA 2L4BA 2CGQA 3NY7B 2LKIA 1HY8A 4BPHA 4NEOA 4PWVB 2K93A 2XZ1C 2CNRA 2KG6A 2MR7A 2KR5A 1T8KA 2K0YA 2FVEA 3LMOA 2AFDA 3GZMA 5HV8A 2LTEA 2LL8A 2CG5B 2FHSC 2FQ2A 4PXHB 1ACPA 3EJDA 1NQ4A 4CA3A 2GDWA 2KG8A 3EJEA 2KOQA 1OR5A 2N6YA 1L0HA 2MY5A 1F80D 5KP8B 2MR8A 2KGEA 4BPFA 2N5HA 1DV5A 2M5RA 4IZ6A 5KP7B 2ROQA 3GZLA 2LIWA 3CE7A 2DNWA 2FQ0A 2N6ZA 2CQ8A 2XZ0D 2KGAA 2GDYA 2X2BA 4MRTC 2QNWA 5HVCA 4H2XC 4DG9A 2JU2A 2EHTA 2EHSA 2L22A 5KP6B 2K92A 2FVFA 2MF4A 2MVUA 2KOSA 2AFEA 2L0QA 2KWLA 4HKGA 2AVAA 2AF8A 2LPKA 2FAEA 2JQ4A 2KOOA 2JGPA 2K0XA 2LOLA 1X3OA 1HQBA 2MVVA 4BPGA 2KOPA 1L0IA 2JU1A 1KLPA 1VKUA 5CZDB 2FVAA 2N5IA 2GDXA 4R0MA 2K2QA 2KW2A 2KGDA 2N98A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1AF8 A;  3EJB A;  2LML A;  2PNG A;  2FQ1 A;  2KG9 A;  3RG2 A;  2N50 A;  2LIU A;  4H2W C;  1DNY A;  2KGC A;  4H2Y C;  2FAC A;  2K94 A;  2FAD A;  2L9F A;  2MD9 A;  2VSQ A;  5EJD A;  2KOR A;  2L4B A;  2CGQ A;  3NY7 B;  2LKI A;  1HY8 A;  4BPH A;  4NEO A;  4PWV B;  2K93 A;  2XZ1 C;  2CNR A;  2KG6 A;  2MR7 A;  2KR5 A;  1T8K A;  2K0Y A;  2FVE A;  3LMO A;  2AFD A;  3GZM A;  5HV8 A;  2LTE A;  2LL8 A;  2CG5 B;  2FHS C;  2FQ2 A;  4PXH B;  1ACP A;  3EJD A;  1NQ4 A;  4CA3 A;  2GDW A;  2KG8 A;  3EJE A;  2KOQ A;  1OR5 A;  2N6Y A;  1L0H A;  2MY5 A;  1F80 D;  5KP8 B;  2MR8 A;  2KGE A;  4BPF A;  2N5H A;  1DV5 A;  2M5R A;  4IZ6 A;  5KP7 B;  2ROQ A;  3GZL A;  2LIW A;  3CE7 A;  2DNW A;  2FQ0 A;  2N6Z A;  2CQ8 A;  2XZ0 D;  2KGA A;  2GDY A;  2X2B A;  4MRT C;  2QNW A;  5HVC A;  4H2X C;  4DG9 A;  2JU2 A;  2EHT A;  2EHS A;  2L22 A;  5KP6 B;  2K92 A;  2FVF A;  2MF4 A;  2MVU A;  2KOS A;  2AFE A;  2L0Q A;  2KWL A;  4HKG A;  2AVA A;  2AF8 A;  2LPK A;  2FAE A;  2JQ4 A;  2KOO A;  2JGP A;  2K0X A;  2LOL A;  1X3O A;  1HQB A;  2MVV A;  4BPG A;  2KOP A;  1L0I A;  2JU1 A;  1KLP A;  1VKU A;  5CZD B;  2FVA A;  2N5I A;  2GDX A;  4R0M A;  2K2Q A;  2KW2 A;  2KGD A;  2N98 A; 
#chains in the Genus database with same CATH topology
 3G1I A;  2JBG A;  2LML A;  2PNG A;  2LIU A;  2E1M A;  2PEI A;  3VRL C;  2FAC A;  2L9F A;  1Q81 Q;  2CGQ A;  1HY8 A;  4BPH A;  3CD6 P;  2K0D X;  2FVE A;  2AFD A;  3GZM A;  5HV8 A;  5JPA A;  2L6E A;  1VHN A;  2FQ2 A;  2PEJ A;  1EIA A;  3H4E A;  1M90 Q;  4CA3 A;  2GDW A;  5HGL A;  2OTJ P;  3EJE A;  2N6Y A;  3E2D A;  2MR8 A;  1EMV A;  3RG6 C;  2OTL P;  4XFZ A;  1UJZ A;  1K30 A;  2KOD A;  2QNW A;  7CEI A;  3CC4 P;  3OW2 O;  1QRJ A;  1VQ9 P;  1N8R Q;  2K5X A;  2K92 A;  1IMP A;  2MVU A;  2AVA A;  1Q82 Q;  1K8A Q;  3CCR P;  1QVG O;  1K73 Q;  3CCE P;  2WPT A;  2KOO A;  4GR2 A;  2KOP A;  1VKU A;  2GDX A;  4R0M A;  2KW2 A;  2PEO A;  1ZNV A;  1AF8 A;  4PH1 A;  2PEM A;  1AYI A;  1MZ8 A;  2KG9 A;  3G29 A;  3Q20 A;  2ONT A;  3P05 A;  4COP A;  1KQS O;  4H2Y C;  2FAD A;  5EJD A;  2KOR A;  2L4B A;  2NO8 A;  2K93 A;  1YJN P;  2KG6 A;  1T8K A;  2K0Y A;  1E0H A;  3G21 A;  2CG5 B;  2Z44 A;  2VLO A;  1VQO P;  4PXH B;  1K9M Q;  3EJD A;  2JAZ A;  3CC2 P;  1OR5 A;  1L0H A;  1VQM P;  2DGY A;  3DPH A;  3B5I A;  5KP8 B;  2KGE A;  2N5H A;  3CCS P;  2QEX P;  3DS1 A;  4IZ6 A;  3GZL A;  1VQL P;  3HYB A;  3CE7 A;  2FQ0 A;  2N6Z A;  2XZ0 D;  1A43 A;  3I56 P;  2KGA A;  2X2B A;  4H2X C;  1VQN P;  3CCJ P;  3CME P;  2EHT A;  1FR2 A;  1RO0 A;  1UNK A;  3GKL C;  2FVF A;  5DCK A;  4F37 A;  2M8N A;  2KOS A;  3LRY A;  1M74 A;  2AFE A;  1QVF O;  2KWL A;  3CXC O;  3DS3 A;  3H0D A;  5BS1 A;  1Q86 Q;  4U0A A;  2K0X A;  2EIA A;  1X3O A;  1HQB A;  2MVV A;  3CCQ P;  1L0I A;  1S72 P;  4U0E A;  3G28 A;  5CZD B;  2N5I A;  1VQP P;  5F2N A;  4COC A;  2GZF A;  1NJI Q;  2K2Q A;  3DS0 A;  3M1M A;  2EFJ A;  3DS2 A;  1M1K Q;  1GXH A;  2PEQ A;  2FQ1 A;  1VQ4 P;  3RG2 A;  2K94 A;  2LKI A;  4NEO A;  3CPW O;  4PWV B;  1IUQ A;  1IMQ A;  2CNR A;  3MGE A;  3WBH A;  1BAJ A;  4XFY A;  1AUM A;  2KR5 A;  4U0F A;  2EG5 A;  1M6E X;  4U0D A;  2LTE A;  1KD1 Q;  2FHS C;  4XRO A;  1KC8 Q;  4XFX A;  3CC7 P;  3CCU P;  2KG8 A;  4QNB A;  3G71 P;  2ERH A;  2LF4 A;  2MY5 A;  1F80 D;  4PH0 A;  4IPY A;  2VLN A;  1W2B O;  1DV5 A;  3H47 A;  2XT1 A;  2LIW A;  2GZI A;  1ZMB A;  1YHQ P;  5HGO A;  2P9X A;  4MRT C;  5HVC A;  1GPJ A;  4DG9 A;  4U0C A;  2JU2 A;  5F2O A;  4M0I A;  3HZQ A;  2PEK A;  3G0V A;  2CWO A;  3G1G A;  5HGM A;  2VLQ A;  2GYK A;  2GZE A;  2AF8 A;  1GXG A;  2LPK A;  2FAE A;  2JQ4 A;  3NTE A;  1M6N A;  4UHP B;  1YI2 P;  1D1D A;  3CCL P;  2N98 A;  1YIT P;  1EOQ A;  2Z45 A;  3EJB A;  2JO0 A;  5BS2 A;  2N50 A;  1VQ8 P;  3GJN A;  4H2W C;  1DNY A;  2KGC A;  2BUO A;  1RO2 A;  2MD9 A;  2VSQ A;  3B4Q A;  3NY7 B;  1YJW P;  5EW5 E;  2XZ1 C;  2PY8 A;  2GZJ A;  2GZG A;  2MR7 A;  4GR6 A;  3DS4 A;  2JYG A;  3LMO A;  2Z46 A;  4QKO A;  1Q7Y Q;  2LL8 A;  3I55 P;  2BHV A;  1E6J P;  3G26 A;  1RNI A;  1ACP A;  1NQ4 A;  1VQ7 P;  3U43 A;  2KOQ A;  1Z6M A;  1YJ9 P;  4BPF A;  3CCV P;  3DTJ A;  2PEN A;  3DS5 A;  2M5R A;  5KP7 B;  2ROQ A;  1CEI A;  3G6E P;  3CCM P;  2DNW A;  1VQ5 P;  2XXM A;  2CQ8 A;  1BXI A;  2QA4 P;  4U0B A;  4XRQ A;  2GDY A;  3CMA P;  3G4S P;  2JB0 A;  2JYL A;  5F2K A;  2EHS A;  4WYM A;  2L22 A;  5KP6 B;  5I4T G;  2M8P A;  2MF4 A;  2XV6 A;  1JJ2 O;  2L0Q A;  4HKG A;  2VLP A;  1VQK P;  1YIJ P;  2JGP A;  1VQ6 P;  2LOL A;  1A8O A;  4BPG A;  2JU1 A;  5HGN A;  2OAR A;  1KLP A;  2FVA A;  2M8L A;  2KGD A; 
#chains in the Genus database with same CATH homology
 1AF8 A;  3EJB A;  2LML A;  2PNG A;  2FQ1 A;  2KG9 A;  3RG2 A;  2N50 A;  2LIU A;  4H2W C;  1DNY A;  2KGC A;  4H2Y C;  2FAC A;  2K94 A;  2FAD A;  2L9F A;  2MD9 A;  2VSQ A;  5EJD A;  2KOR A;  2L4B A;  2CGQ A;  3NY7 B;  2LKI A;  1HY8 A;  4BPH A;  4NEO A;  4PWV B;  2K93 A;  2XZ1 C;  2CNR A;  2KG6 A;  2MR7 A;  2KR5 A;  1T8K A;  2K0Y A;  2FVE A;  3LMO A;  2AFD A;  3GZM A;  5HV8 A;  2LTE A;  2LL8 A;  2CG5 B;  2FHS C;  2FQ2 A;  4PXH B;  1ACP A;  3EJD A;  1NQ4 A;  4CA3 A;  2GDW A;  2KG8 A;  3EJE A;  2KOQ A;  1OR5 A;  2N6Y A;  1L0H A;  2MY5 A;  1F80 D;  5KP8 B;  2MR8 A;  2KGE A;  4BPF A;  2N5H A;  1DV5 A;  2M5R A;  4IZ6 A;  5KP7 B;  2ROQ A;  3GZL A;  2LIW A;  3CE7 A;  2DNW A;  2FQ0 A;  2N6Z A;  2CQ8 A;  2XZ0 D;  2KGA A;  2GDY A;  2X2B A;  4MRT C;  2QNW A;  5HVC A;  4H2X C;  4DG9 A;  2JU2 A;  2EHT A;  2EHS A;  2L22 A;  5KP6 B;  2K92 A;  2FVF A;  2MF4 A;  2MVU A;  2KOS A;  2AFE A;  2L0Q A;  2KWL A;  4HKG A;  2AVA A;  2AF8 A;  2LPK A;  2FAE A;  2JQ4 A;  2KOO A;  2JGP A;  2K0X A;  2LOL A;  1X3O A;  1HQB A;  2MVV A;  4BPG A;  2KOP A;  1L0I A;  2JU1 A;  1KLP A;  1VKU A;  5CZD B;  2FVA A;  2N5I A;  2GDX A;  4R0M A;  2K2Q A;  2KW2 A;  2KGD A;  2N98 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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