2KOOA

Nmr solution structures of hexanoyl-acp from the streptomyces coelicolor fatty acid synthase
Total Genus 27
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
81
structure length
81
Chain Sequence
AATQEEIVAGLAEIVNEIAGIPVEDVKLDKSFTDDLDVDSLSMVEVVVAAEERFDVKIPDDDVKNLKTVGDATKYILDHQA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
source organism Streptomyces coelicolor
publication title Recognition of intermediate functionality by acyl carrier protein over a complete cycle of fatty acid biosynthesis
pubmed doi rcsb
molecule keywords Acyl carrier protein
total genus 27
structure length 81
sequence length 81
ec nomenclature
pdb deposition date 2009-09-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2kooA00
2KW2A 2LPKA 2L4BA 2MVVA 2KR5A 1HY8A 2KOSA 4H2XC 2CNRA 4BPFA 5KP8B 2N6ZA 2LMLA 2L9FA 2KG6A 4H2WC 2N50A 2FQ1A 2FACA 2LKIA 2LIUA 2EHSA 1L0IA 2LIWA 1VKUA 4BPHA 1KLPA 2KG8A 4IZ6A 2KOQA 3GZLA 3LMOA 2VSQA 2LOLA 2KORA 2ROQA 1DNYA 4BPGA 2FQ2A 3RG2A 2K94A 2MY5A 2AF8A 2KGCA 2K0XA 2JGPA 2MD9A 3EJEA 2MR7A 1T8KA 2FVAA 2N6YA 2JQ4A 2MF4A 3CE7A 2N98A 2LL8A 4DG9A 4R0MA 2FVFA 2FVEA 2DNWA 2MVUA 2EHTA 2FAEA 2FADA 2PNGA 2K93A 2AVAA 4HKGA 3NY7B 2L22A 3EJDA 2JU1A 5KP6B 4CA3A 2N5IA 1DV5A 1X3OA 2JU2A 2KG9A 2L0QA 2LTEA 5KP7B 2QNWA 2FQ0A 2KOPA 1AF8A 2AFEA 2KGDA 2CGQA 2GDXA 2KGAA 5CZDB 2KGEA 2FHSC 2KWLA 2K2QA 2X2BA 2MR8A 2XZ0D 3EJBA 4NEOA 2XZ1C 5HV8A 1HQBA 2AFDA 4PXHB 4H2YC 1F80D 4MRTC 2N5HA 2K92A 5EJDA 1L0HA 1ACPA 2K0YA 3GZMA 2GDWA 5HVCA 4PWVB 1OR5A 2CG5B 2GDYA 1NQ4A 2KOOA 2M5RA 2CQ8A
chains in the Genus database with same CATH superfamily
2KW2A 2GYKA 2BHVA 2KOSA 1RNIA 5JPAA 4H2XC 2GZIA 3H0DA 4BPFA 3E2DA 1KC8Q 2L9FA 3H4EA 3Q20A 1AUMA 2FQ1A 4U0AA 1Q7YQ 2GZEA 2LKIA 2LIWA 4BPHA 3G6EP 2KOQA 4F37A 3CC2P 2ROQA 1BXIA 1DNYA 4U0FA 3CD6P 1EMVA 2K94A 1VQPP 1E0HA 1A8OA 2KGCA 2OARA 3EJEA 2GZGA 1T8KA 5I4TG 2M8NA 2JQ4A 3CE7A 3GJNA 2KODA 2PEMA 1VQ8P 2E1MA 2PNGA 1Q81Q 2PEOA 3EJDA 1GXHA 2JU1A 4IPYA 2EFJA 3G21A 2LTEA 5HGLA 3GKLC 1AF8A 2CGQA 1N8RQ 1KQSO 1M6EX 1QRJA 2K2QA 2X2BA 3G4SP 3EJBA 3G1GA 1EIAA 4NEOA 1EOQA 1RO0A 4H2YC 3I55P 1ACPA 2L6EA 5HVCA 2LF4A 5F2OA 2LPKA 2PY8A 2KR5A 1HY8A 4QNBA 4U0BA 2CNRA 2GZJA 2Z44A 4XROA 1K9MQ 3CPWO 3CCSP 1VHNA 3CMAP 2FACA 1UNKA 1YHQP 3LMOA 1BAJA 1K73Q 3NTEA 4BPGA 2MY5A 1CEIA 2FVAA 2N6YA 4QKOA 2VLQA 1GXGA 5DCKA 2QEXP 2MF4A 5HGNA 3U43A 1YIJP 2JBGA 3CCMP 1M6NA 2FVFA 3G28A 3M1MA 2FADA 5F2NA 3RG6C 4HKGA 1ZNVA 2P9XA 1VQ6P 1NJIQ 5EW5E 2ONTA 2K5XA 1K30A 2Z46A 2QNWA 1VQ4P 2FQ0A 2EIAA 2AFEA 1VQOP 1MZ8A 2KGDA 1YITP 1VQMP 5CZDB 2KWLA 2FHSC 2VLOA 1KD1Q 3CCLP 2DGYA 2VLPA 5HV8A 3CCJP 3LRYA 3WBHA 2M8LA 1L0HA 2K0YA 2QA4P 1IMPA 3DS3A 1A43A 4XFYA 1OR5A 1NQ4A 2JO0A 2PEKA 2L4BA 1IMQA 1M90Q 5F2KA 1UJZA 4M0IA 1Q86Q 1VQ7P 3P05A 3B4QA 2OTJP 3CCUP 5BS2A 2KG6A 3G71P 5HGMA 1Z6MA 2LIUA 2EHSA 1L0IA 1VKUA 4PH1A 4U0EA 1KLPA 3GZLA 2PEJA 1AYIA 2FQ2A 3RG2A 2AF8A 1GPJA 2K0XA 3G1IA 3DS0A 2MR7A 3DS4A 2N98A 2LL8A 3DS2A 4DG9A 4R0MA 1VQNP 2DNWA 1M1KQ 2EHTA 1IUQA 3MGEA 3I56P 3CC4P 2K93A 3CCVP 2AVAA 3VRLC 5BS1A 3NY7B 2L22A 1S72P 5KP6B 4CA3A 1X3OA 1D1DA 2ERHA 2KOPA 3CC7P 2GDXA 4WYMA 1K8AQ 2JAZA 4COPA 2KGEA 3B5IA 2XXMA 4UHPB 1M74A 1YJNP 2JYLA 3G0VA 2MR8A 4COCA 2XZ0D 3G26A 2NO8A 2XV6A 2XZ1C 1HQBA 2AFDA 2PEQA 2JYGA 1VQ9P 2K0DX 1QVFO 3G29A 2XT1A 5EJDA 1YJ9P 2GDWA 1VQKP 4PWVB 2KOOA 3DTJA 2PENA 4XRQA 2BUOA 3CCQP 2MVVA 3CCRP 1RO2A 3CCEP 2CWOA 1YI2P 2EG5A 2OTLP 4XFXA 5KP8B 2PEIA 4GR6A 2N6ZA 2WPTA 2LMLA 4H2WC 2N50A 2JB0A 3DS5A 2KG8A 1VQLP 3OW2O 4IZ6A 2VSQA 2LOLA 2KORA 3HYBA 3CMEP 2CQ8A 3DPHA 2JGPA 2MD9A 1YJWP 1Q82Q 1ZMBA 4XFZA 1W2BO 2FVEA 4PH0A 2MVUA 2FAEA 2Z45A 2M8PA 1QVGO 3H47A 4U0DA 2N5IA 1DV5A 5HGOA 2JU2A 3CXCO 1E6JP 2KG9A 2L0QA 5KP7B 1JJ2O 2KGAA 2GZFA 4U0CA 3DS1A 4PXHB 1F80D 4GR2A 4MRTC 2N5HA 2K92A 2VLNA 3GZMA 1VQ5P 2CG5B 1FR2A 2GDYA 3HZQA 2M5RA 7CEIA
chains in the Genus database with same CATH topology
2KW2A 2LPKA 2L4BA 2MVVA 2KR5A 1HY8A 2KOSA 4H2XC 2CNRA 4BPFA 5KP8B 2N6ZA 2LMLA 2L9FA 2KG6A 4H2WC 2N50A 2FQ1A 2FACA 2LKIA 2LIUA 2EHSA 1L0IA 2LIWA 1VKUA 4BPHA 1KLPA 2KG8A 4IZ6A 2KOQA 3GZLA 3LMOA 2VSQA 2LOLA 2KORA 2ROQA 1DNYA 4BPGA 2FQ2A 3RG2A 2K94A 2MY5A 2AF8A 2KGCA 2K0XA 2JGPA 2MD9A 3EJEA 2MR7A 1T8KA 2FVAA 2N6YA 2JQ4A 2MF4A 3CE7A 2N98A 2LL8A 4DG9A 4R0MA 2FVFA 2FVEA 2DNWA 2MVUA 2EHTA 2FAEA 2FADA 2PNGA 2K93A 2AVAA 4HKGA 3NY7B 2L22A 3EJDA 2JU1A 5KP6B 4CA3A 2N5IA 1DV5A 1X3OA 2JU2A 2KG9A 2L0QA 2LTEA 5KP7B 2QNWA 2FQ0A 2KOPA 1AF8A 2AFEA 2KGDA 2CGQA 2GDXA 2KGAA 5CZDB 2KGEA 2FHSC 2KWLA 2K2QA 2X2BA 2MR8A 2XZ0D 3EJBA 4NEOA 2XZ1C 5HV8A 1HQBA 2AFDA 4PXHB 4H2YC 1F80D 4MRTC 2N5HA 2K92A 5EJDA 1L0HA 1ACPA 2K0YA 3GZMA 2GDWA 5HVCA 4PWVB 1OR5A 2CG5B 2GDYA 1NQ4A 2KOOA 2M5RA 2CQ8A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2KW2 A;  2LPK A;  2L4B A;  2MVV A;  2KR5 A;  1HY8 A;  2KOS A;  4H2X C;  2CNR A;  4BPF A;  5KP8 B;  2N6Z A;  2LML A;  2L9F A;  2KG6 A;  4H2W C;  2N50 A;  2FQ1 A;  2FAC A;  2LKI A;  2LIU A;  2EHS A;  1L0I A;  2LIW A;  1VKU A;  4BPH A;  1KLP A;  2KG8 A;  4IZ6 A;  2KOQ A;  3GZL A;  3LMO A;  2VSQ A;  2LOL A;  2KOR A;  2ROQ A;  1DNY A;  4BPG A;  2FQ2 A;  3RG2 A;  2K94 A;  2MY5 A;  2AF8 A;  2KGC A;  2K0X A;  2JGP A;  2MD9 A;  3EJE A;  2MR7 A;  1T8K A;  2FVA A;  2N6Y A;  2JQ4 A;  2MF4 A;  3CE7 A;  2N98 A;  2LL8 A;  4DG9 A;  4R0M A;  2FVF A;  2FVE A;  2DNW A;  2MVU A;  2EHT A;  2FAE A;  2FAD A;  2PNG A;  2K93 A;  2AVA A;  4HKG A;  3NY7 B;  2L22 A;  3EJD A;  2JU1 A;  5KP6 B;  4CA3 A;  2N5I A;  1DV5 A;  1X3O A;  2JU2 A;  2KG9 A;  2L0Q A;  2LTE A;  5KP7 B;  2QNW A;  2FQ0 A;  2KOP A;  1AF8 A;  2AFE A;  2KGD A;  2CGQ A;  2GDX A;  2KGA A;  5CZD B;  2KGE A;  2FHS C;  2KWL A;  2K2Q A;  2X2B A;  2MR8 A;  2XZ0 D;  3EJB A;  4NEO A;  2XZ1 C;  5HV8 A;  1HQB A;  2AFD A;  4PXH B;  4H2Y C;  1F80 D;  4MRT C;  2N5H A;  2K92 A;  5EJD A;  1L0H A;  1ACP A;  2K0Y A;  3GZM A;  2GDW A;  5HVC A;  4PWV B;  1OR5 A;  2CG5 B;  2GDY A;  1NQ4 A;  2KOO A;  2M5R A;  2CQ8 A; 
#chains in the Genus database with same CATH topology
 2KW2 A;  2GYK A;  2BHV A;  2KOS A;  1RNI A;  5JPA A;  4H2X C;  2GZI A;  3H0D A;  4BPF A;  3E2D A;  1KC8 Q;  2L9F A;  3H4E A;  3Q20 A;  1AUM A;  2FQ1 A;  4U0A A;  1Q7Y Q;  2GZE A;  2LKI A;  2LIW A;  4BPH A;  3G6E P;  2KOQ A;  4F37 A;  3CC2 P;  2ROQ A;  1BXI A;  1DNY A;  4U0F A;  3CD6 P;  1EMV A;  2K94 A;  1VQP P;  1E0H A;  1A8O A;  2KGC A;  2OAR A;  3EJE A;  2GZG A;  1T8K A;  5I4T G;  2M8N A;  2JQ4 A;  3CE7 A;  3GJN A;  2KOD A;  2PEM A;  1VQ8 P;  2E1M A;  2PNG A;  1Q81 Q;  2PEO A;  3EJD A;  1GXH A;  2JU1 A;  4IPY A;  2EFJ A;  3G21 A;  2LTE A;  5HGL A;  3GKL C;  1AF8 A;  2CGQ A;  1N8R Q;  1KQS O;  1M6E X;  1QRJ A;  2K2Q A;  2X2B A;  3G4S P;  3EJB A;  3G1G A;  1EIA A;  4NEO A;  1EOQ A;  1RO0 A;  4H2Y C;  3I55 P;  1ACP A;  2L6E A;  5HVC A;  2LF4 A;  5F2O A;  2LPK A;  2PY8 A;  2KR5 A;  1HY8 A;  4QNB A;  4U0B A;  2CNR A;  2GZJ A;  2Z44 A;  4XRO A;  1K9M Q;  3CPW O;  3CCS P;  1VHN A;  3CMA P;  2FAC A;  1UNK A;  1YHQ P;  3LMO A;  1BAJ A;  1K73 Q;  3NTE A;  4BPG A;  2MY5 A;  1CEI A;  2FVA A;  2N6Y A;  4QKO A;  2VLQ A;  1GXG A;  5DCK A;  2QEX P;  2MF4 A;  5HGN A;  3U43 A;  1YIJ P;  2JBG A;  3CCM P;  1M6N A;  2FVF A;  3G28 A;  3M1M A;  2FAD A;  5F2N A;  3RG6 C;  4HKG A;  1ZNV A;  2P9X A;  1VQ6 P;  1NJI Q;  5EW5 E;  2ONT A;  2K5X A;  1K30 A;  2Z46 A;  2QNW A;  1VQ4 P;  2FQ0 A;  2EIA A;  2AFE A;  1VQO P;  1MZ8 A;  2KGD A;  1YIT P;  1VQM P;  5CZD B;  2KWL A;  2FHS C;  2VLO A;  1KD1 Q;  3CCL P;  2DGY A;  2VLP A;  5HV8 A;  3CCJ P;  3LRY A;  3WBH A;  2M8L A;  1L0H A;  2K0Y A;  2QA4 P;  1IMP A;  3DS3 A;  1A43 A;  4XFY A;  1OR5 A;  1NQ4 A;  2JO0 A;  2PEK A;  2L4B A;  1IMQ A;  1M90 Q;  5F2K A;  1UJZ A;  4M0I A;  1Q86 Q;  1VQ7 P;  3P05 A;  3B4Q A;  2OTJ P;  3CCU P;  5BS2 A;  2KG6 A;  3G71 P;  5HGM A;  1Z6M A;  2LIU A;  2EHS A;  1L0I A;  1VKU A;  4PH1 A;  4U0E A;  1KLP A;  3GZL A;  2PEJ A;  1AYI A;  2FQ2 A;  3RG2 A;  2AF8 A;  1GPJ A;  2K0X A;  3G1I A;  3DS0 A;  2MR7 A;  3DS4 A;  2N98 A;  2LL8 A;  3DS2 A;  4DG9 A;  4R0M A;  1VQN P;  2DNW A;  1M1K Q;  2EHT A;  1IUQ A;  3MGE A;  3I56 P;  3CC4 P;  2K93 A;  3CCV P;  2AVA A;  3VRL C;  5BS1 A;  3NY7 B;  2L22 A;  1S72 P;  5KP6 B;  4CA3 A;  1X3O A;  1D1D A;  2ERH A;  2KOP A;  3CC7 P;  2GDX A;  4WYM A;  1K8A Q;  2JAZ A;  4COP A;  2KGE A;  3B5I A;  2XXM A;  4UHP B;  1M74 A;  1YJN P;  2JYL A;  3G0V A;  2MR8 A;  4COC A;  2XZ0 D;  3G26 A;  2NO8 A;  2XV6 A;  2XZ1 C;  1HQB A;  2AFD A;  2PEQ A;  2JYG A;  1VQ9 P;  2K0D X;  1QVF O;  3G29 A;  2XT1 A;  5EJD A;  1YJ9 P;  2GDW A;  1VQK P;  4PWV B;  2KOO A;  3DTJ A;  2PEN A;  4XRQ A;  2BUO A;  3CCQ P;  2MVV A;  3CCR P;  1RO2 A;  3CCE P;  2CWO A;  1YI2 P;  2EG5 A;  2OTL P;  4XFX A;  5KP8 B;  2PEI A;  4GR6 A;  2N6Z A;  2WPT A;  2LML A;  4H2W C;  2N50 A;  2JB0 A;  3DS5 A;  2KG8 A;  1VQL P;  3OW2 O;  4IZ6 A;  2VSQ A;  2LOL A;  2KOR A;  3HYB A;  3CME P;  2CQ8 A;  3DPH A;  2JGP A;  2MD9 A;  1YJW P;  1Q82 Q;  1ZMB A;  4XFZ A;  1W2B O;  2FVE A;  4PH0 A;  2MVU A;  2FAE A;  2Z45 A;  2M8P A;  1QVG O;  3H47 A;  4U0D A;  2N5I A;  1DV5 A;  5HGO A;  2JU2 A;  3CXC O;  1E6J P;  2KG9 A;  2L0Q A;  5KP7 B;  1JJ2 O;  2KGA A;  2GZF A;  4U0C A;  3DS1 A;  4PXH B;  1F80 D;  4GR2 A;  4MRT C;  2N5H A;  2K92 A;  2VLN A;  3GZM A;  1VQ5 P;  2CG5 B;  1FR2 A;  2GDY A;  3HZQ A;  2M5R A;  7CEI A; 
#chains in the Genus database with same CATH homology
 2KW2 A;  2LPK A;  2L4B A;  2MVV A;  2KR5 A;  1HY8 A;  2KOS A;  4H2X C;  2CNR A;  4BPF A;  5KP8 B;  2N6Z A;  2LML A;  2L9F A;  2KG6 A;  4H2W C;  2N50 A;  2FQ1 A;  2FAC A;  2LKI A;  2LIU A;  2EHS A;  1L0I A;  2LIW A;  1VKU A;  4BPH A;  1KLP A;  2KG8 A;  4IZ6 A;  2KOQ A;  3GZL A;  3LMO A;  2VSQ A;  2LOL A;  2KOR A;  2ROQ A;  1DNY A;  4BPG A;  2FQ2 A;  3RG2 A;  2K94 A;  2MY5 A;  2AF8 A;  2KGC A;  2K0X A;  2JGP A;  2MD9 A;  3EJE A;  2MR7 A;  1T8K A;  2FVA A;  2N6Y A;  2JQ4 A;  2MF4 A;  3CE7 A;  2N98 A;  2LL8 A;  4DG9 A;  4R0M A;  2FVF A;  2FVE A;  2DNW A;  2MVU A;  2EHT A;  2FAE A;  2FAD A;  2PNG A;  2K93 A;  2AVA A;  4HKG A;  3NY7 B;  2L22 A;  3EJD A;  2JU1 A;  5KP6 B;  4CA3 A;  2N5I A;  1DV5 A;  1X3O A;  2JU2 A;  2KG9 A;  2L0Q A;  2LTE A;  5KP7 B;  2QNW A;  2FQ0 A;  2KOP A;  1AF8 A;  2AFE A;  2KGD A;  2CGQ A;  2GDX A;  2KGA A;  5CZD B;  2KGE A;  2FHS C;  2KWL A;  2K2Q A;  2X2B A;  2MR8 A;  2XZ0 D;  3EJB A;  4NEO A;  2XZ1 C;  5HV8 A;  1HQB A;  2AFD A;  4PXH B;  4H2Y C;  1F80 D;  4MRT C;  2N5H A;  2K92 A;  5EJD A;  1L0H A;  1ACP A;  2K0Y A;  3GZM A;  2GDW A;  5HVC A;  4PWV B;  1OR5 A;  2CG5 B;  2GDY A;  1NQ4 A;  2KOO A;  2M5R A;  2CQ8 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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