2KG6A

Solution structure of the acetyl actinorhodin acyl carrier protein from streptomyces coelicolor
Total Genus 23
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
23
sequence length
86
structure length
86
Chain Sequence
MATLLTTDDLRRALVESAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Probing the Interactions of Early Polyketide Intermediates with the Actinorhodin ACP from S. coelicolor A3(2).
pubmed doi rcsb
source organism Streptomyces coelicolor
molecule tags Biosynthetic protein
molecule keywords Actinorhodin polyketide synthase acyl carrier protein
total genus 23
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 2009-03-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2kg6A00
2K0XA 2N5HA 2LL8A 2FADA 2FAEA 2KG6A 2FACA 2X2BA 2GDXA 3NY7B 4PWVB 3GZMA 4HKGA 2FQ1A 2JU2A 4BPGA 1L0HA 2GDWA 4BPHA 2MR8A 4MRTC 5KP8B 4BPFA 1KLPA 2LPKA 2K0YA 1VKUA 2FVEA 1F80D 1DNYA 5KP7B 2MVVA 2L4BA 2MY5A 2K93A 1X3OA 2M5RA 2LKIA 2MR7A 2KORA 2N6ZA 2XZ1C 3GZLA 2KW2A 3CE7A 2KOQA 4H2XC 2K94A 4IZ6A 2FQ0A 2AFDA 2L0QA 2CQ8A 2FHSC 3EJEA 4H2YC 2JGPA 2LIUA 2N5IA 2L9FA 3EJDA 4R0MA 5KP6B 5EJDA 2EHTA 2DNWA 2KGCA 2N98A 2VSQA 2LMLA 2JQ4A 2N6YA 4PXHB 4H2WC 1DV5A 2JU1A 4DG9A 2KOOA 2XZ0D 1L0IA 2KG9A 2CG5B 2MF4A 2K92A 4NEOA 2LIWA 2KOSA 5HV8A 2AF8A 2FVAA 2MD9A 5HVCA 2KG8A 4CA3A 1HY8A 1AF8A 2CGQA 2MVUA 2L22A 2FQ2A 2QNWA 2LTEA 2N50A 2KGEA 2GDYA 2ROQA 2K2QA 2CNRA 1NQ4A 2KOPA 3RG2A 1HQBA 2EHSA 1T8KA 1ACPA 2FVFA 3LMOA 2KGDA 5CZDB 2AFEA 2KR5A 2LOLA 2PNGA 1OR5A 2KWLA 3EJBA 2KGAA 2AVAA
chains in the Genus database with same CATH superfamily
1KQSO 2K0XA 2N5HA 1RO2A 2KG6A 1K9MQ 4QKOA 4XFYA 4COCA 3CCQP 4GR6A 2FQ1A 5HGNA 1RO0A 4BPHA 4UHPB 3CC7P 3U43A 1FR2A 5KP8B 4WYMA 4M0IA 2XV6A 1M90Q 2E1MA 2K93A 2N6ZA 2XZ1C 2KOQA 1UJZA 7CEIA 1YITP 4U0EA 3EJEA 2EG5A 1BXIA 3DS2A 2QA4P 3DPHA 1GXGA 5DCKA 3CCUP 2N98A 2N6YA 1VQ5P 4PXHB 3RG6C 3G6EP 4DG9A 3VRLC 2GZJA 3CC4P 2PY8A 3G1IA 2VLPA 4IPYA 4U0DA 3CCSP 4PH0A 2OTLP 2LTEA 5I4TG 1IMQA 2ROQA 4GR2A 3P05A 2DGYA 1A8OA 1HQBA 1VQ9P 2OTJP 2FVFA 2L6EA 5CZDB 2KR5A 1M6EX 2XXMA 1YI2P 2ERHA 3OW2O 2KGAA 2PENA 2AVAA 2OARA 2LL8A 1KD1Q 1QRJA 2X2BA 3H0DA 1YJ9P 1IMPA 1YIJP 1Q86Q 5HGOA 2CWOA 3DS3A 1Q82Q 3HZQA 4U0BA 4BPFA 4XFXA 1KLPA 3G26A 3I56P 2QEXP 2FVEA 4U0FA 5KP7B 3G28A 2PEJA 1W2BO 2LKIA 3G4SP 1YJWP 2KW2A 2FQ0A 5JPAA 1M6NA 2JB0A 1VQKP 1VQ8P 2Z45A 1AYIA 3CD6P 2LIUA 2L9FA 3EJDA 3H47A 5KP6B 2EHTA 1K73Q 1EMVA 2JQ4A 3DTJA 2GYKA 1L0IA 1VQOP 5HGLA 1S72P 1JJ2O 2KG9A 2CG5B 1BAJA 2K92A 1MZ8A 5HGMA 1QVFO 2KOSA 2Z46A 3DS5A 5BS1A 2GZFA 2BUOA 5HVCA 2M8NA 4CA3A 1HY8A 2CGQA 2FQ2A 2VLOA 5F2KA 5F2NA 2N50A 1K8AQ 2K2QA 3MGEA 2CNRA 1NQ4A 3RG2A 2EHSA 3B4QA 1T8KA 4XFZA 2Z44A 2LF4A 2PNGA 1OR5A 2KWLA 3EJBA 1EOQA 1VQLP 1VQ6P 3NTEA 1VQMP 2FADA 1A43A 3G0VA 2P9XA 4PWVB 1D1DA 3GZMA 2BHVA 5EW5E 1L0HA 2GDWA 2MR8A 1ZNVA 5F2OA 1EIAA 2LPKA 2K0YA 1F80D 2JO0A 1M74A 3CCJP 2PEQA 1RNIA 1X3OA 3GZLA 2PEMA 2K94A 3B5IA 3CCMP 2NO8A 2FHSC 1IUQA 2M8PA 4H2YC 2JGPA 2N5IA 4R0MA 5EJDA 2KGCA 2VSQA 1DV5A 2JU1A 2KOOA 3CMEP 1UNKA 4F37A 2XT1A 2XZ0D 3G29A 1VQ4P 3H4EA 2MF4A 1GPJA 3WBHA 2ONTA 2VLNA 1ZMBA 2AF8A 2FVAA 3CMAP 1KC8Q 2JYLA 1AF8A 3HYBA 2KGEA 3G1GA 3G21A 1ACPA 2EIAA 3LMOA 2AFEA 2LOLA 2JYGA 1NJIQ 1VQPP 4U0AA 2FAEA 2FACA 2GDXA 1E0HA 3NY7B 1E6JP 3CCRP 1AUMA 4HKGA 2JU2A 4BPGA 4QNBA 1Z6MA 1Q81Q 2KODA 4PH1A 4MRTC 2WPTA 1VQ7P 1CEIA 1VKUA 1DNYA 2MVVA 2GZIA 2L4BA 2MY5A 1QVGO 1YJNP 2M5RA 2MR7A 2KORA 3CE7A 4H2XC 4IZ6A 2PEKA 2M8LA 2AFDA 2L0QA 2CQ8A 1N8RQ 3DS1A 4XRQA 2JAZA 3CCVP 3CCLP 3E2DA 2DNWA 3CPWO 2K5XA 1K30A 2EFJA 2LMLA 4H2WC 2JBGA 1VQNP 5BS2A 3Q20A 3DS4A 1Q7YQ 3LRYA 4NEOA 2LIWA 2PEIA 2VLQA 3GKLC 3CXCO 4U0CA 5HV8A 3I55P 2K0DX 2MD9A 2KG8A 3CC2P 1GXHA 2MVUA 2L22A 1VHNA 3DS0A 2GZGA 2QNWA 1YHQP 3M1MA 2GDYA 4COPA 3G71P 2KOPA 3GJNA 3CCEP 2PEOA 2KGDA 4XROA 2GZEA 1M1KQ
chains in the Genus database with same CATH topology
2K0XA 2N5HA 2LL8A 2FADA 2FAEA 2KG6A 2FACA 2X2BA 2GDXA 3NY7B 4PWVB 3GZMA 4HKGA 2FQ1A 2JU2A 4BPGA 1L0HA 2GDWA 4BPHA 2MR8A 4MRTC 5KP8B 4BPFA 1KLPA 2LPKA 2K0YA 1VKUA 2FVEA 1F80D 1DNYA 5KP7B 2MVVA 2L4BA 2MY5A 2K93A 1X3OA 2M5RA 2LKIA 2MR7A 2KORA 2N6ZA 2XZ1C 3GZLA 2KW2A 3CE7A 2KOQA 4H2XC 2K94A 4IZ6A 2FQ0A 2AFDA 2L0QA 2CQ8A 2FHSC 3EJEA 4H2YC 2JGPA 2LIUA 2N5IA 2L9FA 3EJDA 4R0MA 5KP6B 5EJDA 2EHTA 2DNWA 2KGCA 2N98A 2VSQA 2LMLA 2JQ4A 2N6YA 4PXHB 4H2WC 1DV5A 2JU1A 4DG9A 2KOOA 2XZ0D 1L0IA 2KG9A 2CG5B 2MF4A 2K92A 4NEOA 2LIWA 2KOSA 5HV8A 2AF8A 2FVAA 2MD9A 5HVCA 2KG8A 4CA3A 1HY8A 1AF8A 2CGQA 2MVUA 2L22A 2FQ2A 2QNWA 2LTEA 2N50A 2KGEA 2GDYA 2ROQA 2K2QA 2CNRA 1NQ4A 2KOPA 3RG2A 1HQBA 2EHSA 1T8KA 1ACPA 2FVFA 3LMOA 2KGDA 5CZDB 2AFEA 2KR5A 2LOLA 2PNGA 1OR5A 2KWLA 3EJBA 2KGAA 2AVAA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2K0X A;  2N5H A;  2LL8 A;  2FAD A;  2FAE A;  2KG6 A;  2FAC A;  2X2B A;  2GDX A;  3NY7 B;  4PWV B;  3GZM A;  4HKG A;  2FQ1 A;  2JU2 A;  4BPG A;  1L0H A;  2GDW A;  4BPH A;  2MR8 A;  4MRT C;  5KP8 B;  4BPF A;  1KLP A;  2LPK A;  2K0Y A;  1VKU A;  2FVE A;  1F80 D;  1DNY A;  5KP7 B;  2MVV A;  2L4B A;  2MY5 A;  2K93 A;  1X3O A;  2M5R A;  2LKI A;  2MR7 A;  2KOR A;  2N6Z A;  2XZ1 C;  3GZL A;  2KW2 A;  3CE7 A;  2KOQ A;  4H2X C;  2K94 A;  4IZ6 A;  2FQ0 A;  2AFD A;  2L0Q A;  2CQ8 A;  2FHS C;  3EJE A;  4H2Y C;  2JGP A;  2LIU A;  2N5I A;  2L9F A;  3EJD A;  4R0M A;  5KP6 B;  5EJD A;  2EHT A;  2DNW A;  2KGC A;  2N98 A;  2VSQ A;  2LML A;  2JQ4 A;  2N6Y A;  4PXH B;  4H2W C;  1DV5 A;  2JU1 A;  4DG9 A;  2KOO A;  2XZ0 D;  1L0I A;  2KG9 A;  2CG5 B;  2MF4 A;  2K92 A;  4NEO A;  2LIW A;  2KOS A;  5HV8 A;  2AF8 A;  2FVA A;  2MD9 A;  5HVC A;  2KG8 A;  4CA3 A;  1HY8 A;  1AF8 A;  2CGQ A;  2MVU A;  2L22 A;  2FQ2 A;  2QNW A;  2LTE A;  2N50 A;  2KGE A;  2GDY A;  2ROQ A;  2K2Q A;  2CNR A;  1NQ4 A;  2KOP A;  3RG2 A;  1HQB A;  2EHS A;  1T8K A;  1ACP A;  2FVF A;  3LMO A;  2KGD A;  5CZD B;  2AFE A;  2KR5 A;  2LOL A;  2PNG A;  1OR5 A;  2KWL A;  3EJB A;  2KGA A;  2AVA A; 
#chains in the Genus database with same CATH topology
 1KQS O;  2K0X A;  2N5H A;  1RO2 A;  2KG6 A;  1K9M Q;  4QKO A;  4XFY A;  4COC A;  3CCQ P;  4GR6 A;  2FQ1 A;  5HGN A;  1RO0 A;  4BPH A;  4UHP B;  3CC7 P;  3U43 A;  1FR2 A;  5KP8 B;  4WYM A;  4M0I A;  2XV6 A;  1M90 Q;  2E1M A;  2K93 A;  2N6Z A;  2XZ1 C;  2KOQ A;  1UJZ A;  7CEI A;  1YIT P;  4U0E A;  3EJE A;  2EG5 A;  1BXI A;  3DS2 A;  2QA4 P;  3DPH A;  1GXG A;  5DCK A;  3CCU P;  2N98 A;  2N6Y A;  1VQ5 P;  4PXH B;  3RG6 C;  3G6E P;  4DG9 A;  3VRL C;  2GZJ A;  3CC4 P;  2PY8 A;  3G1I A;  2VLP A;  4IPY A;  4U0D A;  3CCS P;  4PH0 A;  2OTL P;  2LTE A;  5I4T G;  1IMQ A;  2ROQ A;  4GR2 A;  3P05 A;  2DGY A;  1A8O A;  1HQB A;  1VQ9 P;  2OTJ P;  2FVF A;  2L6E A;  5CZD B;  2KR5 A;  1M6E X;  2XXM A;  1YI2 P;  2ERH A;  3OW2 O;  2KGA A;  2PEN A;  2AVA A;  2OAR A;  2LL8 A;  1KD1 Q;  1QRJ A;  2X2B A;  3H0D A;  1YJ9 P;  1IMP A;  1YIJ P;  1Q86 Q;  5HGO A;  2CWO A;  3DS3 A;  1Q82 Q;  3HZQ A;  4U0B A;  4BPF A;  4XFX A;  1KLP A;  3G26 A;  3I56 P;  2QEX P;  2FVE A;  4U0F A;  5KP7 B;  3G28 A;  2PEJ A;  1W2B O;  2LKI A;  3G4S P;  1YJW P;  2KW2 A;  2FQ0 A;  5JPA A;  1M6N A;  2JB0 A;  1VQK P;  1VQ8 P;  2Z45 A;  1AYI A;  3CD6 P;  2LIU A;  2L9F A;  3EJD A;  3H47 A;  5KP6 B;  2EHT A;  1K73 Q;  1EMV A;  2JQ4 A;  3DTJ A;  2GYK A;  1L0I A;  1VQO P;  5HGL A;  1S72 P;  1JJ2 O;  2KG9 A;  2CG5 B;  1BAJ A;  2K92 A;  1MZ8 A;  5HGM A;  1QVF O;  2KOS A;  2Z46 A;  3DS5 A;  5BS1 A;  2GZF A;  2BUO A;  5HVC A;  2M8N A;  4CA3 A;  1HY8 A;  2CGQ A;  2FQ2 A;  2VLO A;  5F2K A;  5F2N A;  2N50 A;  1K8A Q;  2K2Q A;  3MGE A;  2CNR A;  1NQ4 A;  3RG2 A;  2EHS A;  3B4Q A;  1T8K A;  4XFZ A;  2Z44 A;  2LF4 A;  2PNG A;  1OR5 A;  2KWL A;  3EJB A;  1EOQ A;  1VQL P;  1VQ6 P;  3NTE A;  1VQM P;  2FAD A;  1A43 A;  3G0V A;  2P9X A;  4PWV B;  1D1D A;  3GZM A;  2BHV A;  5EW5 E;  1L0H A;  2GDW A;  2MR8 A;  1ZNV A;  5F2O A;  1EIA A;  2LPK A;  2K0Y A;  1F80 D;  2JO0 A;  1M74 A;  3CCJ P;  2PEQ A;  1RNI A;  1X3O A;  3GZL A;  2PEM A;  2K94 A;  3B5I A;  3CCM P;  2NO8 A;  2FHS C;  1IUQ A;  2M8P A;  4H2Y C;  2JGP A;  2N5I A;  4R0M A;  5EJD A;  2KGC A;  2VSQ A;  1DV5 A;  2JU1 A;  2KOO A;  3CME P;  1UNK A;  4F37 A;  2XT1 A;  2XZ0 D;  3G29 A;  1VQ4 P;  3H4E A;  2MF4 A;  1GPJ A;  3WBH A;  2ONT A;  2VLN A;  1ZMB A;  2AF8 A;  2FVA A;  3CMA P;  1KC8 Q;  2JYL A;  1AF8 A;  3HYB A;  2KGE A;  3G1G A;  3G21 A;  1ACP A;  2EIA A;  3LMO A;  2AFE A;  2LOL A;  2JYG A;  1NJI Q;  1VQP P;  4U0A A;  2FAE A;  2FAC A;  2GDX A;  1E0H A;  3NY7 B;  1E6J P;  3CCR P;  1AUM A;  4HKG A;  2JU2 A;  4BPG A;  4QNB A;  1Z6M A;  1Q81 Q;  2KOD A;  4PH1 A;  4MRT C;  2WPT A;  1VQ7 P;  1CEI A;  1VKU A;  1DNY A;  2MVV A;  2GZI A;  2L4B A;  2MY5 A;  1QVG O;  1YJN P;  2M5R A;  2MR7 A;  2KOR A;  3CE7 A;  4H2X C;  4IZ6 A;  2PEK A;  2M8L A;  2AFD A;  2L0Q A;  2CQ8 A;  1N8R Q;  3DS1 A;  4XRQ A;  2JAZ A;  3CCV P;  3CCL P;  3E2D A;  2DNW A;  3CPW O;  2K5X A;  1K30 A;  2EFJ A;  2LML A;  4H2W C;  2JBG A;  1VQN P;  5BS2 A;  3Q20 A;  3DS4 A;  1Q7Y Q;  3LRY A;  4NEO A;  2LIW A;  2PEI A;  2VLQ A;  3GKL C;  3CXC O;  4U0C A;  5HV8 A;  3I55 P;  2K0D X;  2MD9 A;  2KG8 A;  3CC2 P;  1GXH A;  2MVU A;  2L22 A;  1VHN A;  3DS0 A;  2GZG A;  2QNW A;  1YHQ P;  3M1M A;  2GDY A;  4COP A;  3G71 P;  2KOP A;  3GJN A;  3CCE P;  2PEO A;  2KGD A;  4XRO A;  2GZE A;  1M1K Q; 
#chains in the Genus database with same CATH homology
 2K0X A;  2N5H A;  2LL8 A;  2FAD A;  2FAE A;  2KG6 A;  2FAC A;  2X2B A;  2GDX A;  3NY7 B;  4PWV B;  3GZM A;  4HKG A;  2FQ1 A;  2JU2 A;  4BPG A;  1L0H A;  2GDW A;  4BPH A;  2MR8 A;  4MRT C;  5KP8 B;  4BPF A;  1KLP A;  2LPK A;  2K0Y A;  1VKU A;  2FVE A;  1F80 D;  1DNY A;  5KP7 B;  2MVV A;  2L4B A;  2MY5 A;  2K93 A;  1X3O A;  2M5R A;  2LKI A;  2MR7 A;  2KOR A;  2N6Z A;  2XZ1 C;  3GZL A;  2KW2 A;  3CE7 A;  2KOQ A;  4H2X C;  2K94 A;  4IZ6 A;  2FQ0 A;  2AFD A;  2L0Q A;  2CQ8 A;  2FHS C;  3EJE A;  4H2Y C;  2JGP A;  2LIU A;  2N5I A;  2L9F A;  3EJD A;  4R0M A;  5KP6 B;  5EJD A;  2EHT A;  2DNW A;  2KGC A;  2N98 A;  2VSQ A;  2LML A;  2JQ4 A;  2N6Y A;  4PXH B;  4H2W C;  1DV5 A;  2JU1 A;  4DG9 A;  2KOO A;  2XZ0 D;  1L0I A;  2KG9 A;  2CG5 B;  2MF4 A;  2K92 A;  4NEO A;  2LIW A;  2KOS A;  5HV8 A;  2AF8 A;  2FVA A;  2MD9 A;  5HVC A;  2KG8 A;  4CA3 A;  1HY8 A;  1AF8 A;  2CGQ A;  2MVU A;  2L22 A;  2FQ2 A;  2QNW A;  2LTE A;  2N50 A;  2KGE A;  2GDY A;  2ROQ A;  2K2Q A;  2CNR A;  1NQ4 A;  2KOP A;  3RG2 A;  1HQB A;  2EHS A;  1T8K A;  1ACP A;  2FVF A;  3LMO A;  2KGD A;  5CZD B;  2AFE A;  2KR5 A;  2LOL A;  2PNG A;  1OR5 A;  2KWL A;  3EJB A;  2KGA A;  2AVA A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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