2KG6A

Solution structure of the acetyl actinorhodin acyl carrier protein from streptomyces coelicolor
Total Genus 23
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
23
sequence length
86
structure length
86
Chain Sequence
MATLLTTDDLRRALVESAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Biosynthetic protein
molecule keywords Actinorhodin polyketide synthase acyl carrier protein
publication title Probing the Interactions of Early Polyketide Intermediates with the Actinorhodin ACP from S. coelicolor A3(2).
pubmed doi rcsb
source organism Streptomyces coelicolor
total genus 23
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 2009-03-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2kg6A00
3GZMA 2MD9A 2LMLA 2CG5B 2L9FA 2FVAA 4BPGA 2CQ8A 1T8KA 2FVEA 2K0XA 2LIUA 3GZLA 2VSQA 1L0IA 2KOOA 3CE7A 2FQ1A 2K0YA 2GDYA 2KG9A 2N6ZA 2LKIA 1ACPA 4H2YC 1KLPA 3NY7B 2X2BA 3EJDA 4IZ6A 2KWLA 2CGQA 4CA3A 4BPFA 2DNWA 2KOPA 4HKGA 2PNGA 4PWVB 3EJEA 1F80D 2FADA 2FHSC 2EHSA 4BPHA 1HY8A 2XZ1C 4PXHB 2LOLA 1DV5A 1DNYA 2L4BA 2FAEA 2N5IA 2LPKA 2KGDA 2AFEA 2ROQA 2KR5A 2K94A 2LIWA 2JU1A 2XZ0D 1L0HA 2CNRA 2N50A 1NQ4A 2K93A 1OR5A 2N6YA 2K2QA 2LTEA 2K92A 3EJBA 2KG6A 2KG8A 2JU2A 2KGAA 1X3OA 1HQBA 2FQ0A 2KGCA 5CZDB 2GDWA 2M5RA 5EJDA 2AFDA 4NEOA 3LMOA 4MRTC 1AF8A 2FVFA 2MR8A 2KGEA 2KOQA 5HV8A 5HVCA 2FQ2A 4H2WC 5KP7B 2KOSA 1VKUA 2KORA 2AF8A 5KP6B 2MY5A 2GDXA 2N5HA 2JQ4A 2MVVA 2L0QA 2FACA 2L22A 2N98A 2MF4A 5KP8B 2JGPA 2MVUA 2AVAA 4R0MA 2QNWA 2MR7A 4H2XC 4DG9A 2EHTA 2LL8A 2KW2A 3RG2A
chains in the Genus database with same CATH superfamily
2P9XA 2LMLA 1S72P 2FVEA 2VSQA 3I55P 3MGEA 1L0IA 3DS2A 4PH0A 4COCA 2KG9A 2N6ZA 2EG5A 2Z46A 1QRJA 3H47A 3CCUP 3G4SP 2JO0A 4U0FA 2ONTA 4IZ6A 3CXCO 4UHPB 1M74A 3B5IA 4PWVB 3EJEA 1VQ9P 2FADA 2FHSC 2EHSA 4BPHA 1HY8A 2JB0A 2XZ1C 1YJWP 3G0VA 1Q82Q 4F37A 1DNYA 4M0IA 2N5IA 2LPKA 3LRYA 2AFEA 2KR5A 2K94A 2LIWA 2GZIA 1ZNVA 1OR5A 5F2OA 3CMEP 5HGMA 3EJBA 3G1GA 1MZ8A 2JU2A 2KGAA 2KG8A 4XRQA 2KGCA 3DPHA 1UJZA 1VQ5P 2KGEA 2KOQA 1ZMBA 1AUMA 2FQ2A 7CEIA 1M90Q 1IMQA 2PEQA 1VHNA 2OTLP 2EIAA 2L0QA 1EIAA 2PEOA 5KP8B 3B4QA 2JGPA 3G29A 2MR7A 4DG9A 3RG2A 5EW5E 2DGYA 4PH1A 1Q7YQ 2CG5B 2L9FA 1QVGO 4BPGA 4U0EA 3I56P 2XV6A 1VQOP 2LIUA 3GZLA 1Z6MA 3CE7A 1BXIA 2JYGA 3DS5A 5HGOA 4H2YC 2GZGA 3DTJA 3HZQA 3NY7B 1N8RQ 3CC7P 2CGQA 1D1DA 2DNWA 1GXHA 2PNGA 3CC2P 1K8AQ 2VLOA 4U0DA 4PXHB 2LOLA 2PY8A 1YJ9P 2L4BA 3DS3A 1NJIQ 3DS0A 1KD1Q 3DS1A 2JU1A 2XT1A 2XZ0D 2L6EA 3RG6C 1NQ4A 2K93A 3DS4A 2BUOA 2LTEA 3U43A 4COPA 1KC8Q 5CZDB 1EMVA 3CCQP 5EJDA 3NTEA 4NEOA 2M8LA 3H4EA 2K5XA 2PENA 5KP7B 2KOSA 2PEKA 2MY5A 1AYIA 1VQKP 4IPYA 2OTJP 1YHQP 1E0HA 1KQSO 2Z44A 4GR6A 1VQPP 2QNWA 4H2XC 1VQ6P 1VQMP 1M1KQ 3GZMA 2GZFA 4XFYA 2GYKA 2MD9A 5HGNA 3CCJP 2FVAA 1YI2P 1CEIA 2CQ8A 1T8KA 1E6JP 3P05A 2KOOA 2FQ1A 2Z45A 2QA4P 3CD6P 1ACPA 5F2NA 2LF4A 2X2BA 4U0AA 2KWLA 3CCRP 1VQ7P 1K73Q 2OARA 4CA3A 2PEJA 2JYLA 4WYMA 4BPFA 2KOPA 1F80D 1RNIA 3CCMP 1DV5A 3CMAP 2GZEA 2FAEA 3G6EP 2KGDA 2PEMA 5I4TG 3WBHA 1L0HA 2N50A 1UNKA 2K2QA 3OW2O 2K92A 1A8OA 4U0BA 2KG6A 1VQLP 1X3OA 1HQBA 1Q86Q 5JPAA 3LMOA 2MR8A 2CWOA 5HV8A 3M1MA 1VKUA 1Q81Q 2N5HA 2VLPA 3G1IA 2L22A 4QKOA 2N98A 2M8PA 3CCSP 1QVFO 4XFZA 2MVUA 1YITP 1EOQA 2NO8A 2EHTA 1VQ4P 2ERHA 2KW2A 5DCKA 2VLNA 3G28A 4GR2A 5BS2A 4XFXA 2GZJA 1FR2A 4XROA 1K9MQ 2K0XA 1RO2A 3HYBA 1GPJA 1W2BO 1M6EX 2XXMA 2K0YA 2GDYA 3G21A 2LKIA 4U0CA 1KLPA 3EJDA 3G26A 2WPTA 2QEXP 3CC4P 3Q20A 3CCVP 3CCEP 5F2KA 4HKGA 4QNBA 1VQ8P 1IUQA 5HGLA 1VQNP 1RO0A 1IMPA 3G71P 2JBGA 2ROQA 1M6NA 2KODA 2PEIA 2CNRA 1GXGA 2N6YA 1K30A 2FQ0A 2GDWA 2M5RA 2AFDA 1JJ2O 2JAZA 5BS1A 3H0DA 4MRTC 1AF8A 2FVFA 1YJNP 1BAJA 3CPWO 5HVCA 4H2WC 3VRLC 2KORA 2AF8A 2EFJA 3E2DA 5KP6B 2GDXA 2VLQA 1A43A 2JQ4A 2MVVA 2FACA 3CCLP 2E1MA 2MF4A 2BHVA 3GJNA 3GKLC 2AVAA 4R0MA 2M8NA 2K0DX 2LL8A 1YIJP
chains in the Genus database with same CATH topology
3GZMA 2MD9A 2LMLA 2CG5B 2L9FA 2FVAA 4BPGA 2CQ8A 1T8KA 2FVEA 2K0XA 2LIUA 3GZLA 2VSQA 1L0IA 2KOOA 3CE7A 2FQ1A 2K0YA 2GDYA 2KG9A 2N6ZA 2LKIA 1ACPA 4H2YC 1KLPA 3NY7B 2X2BA 3EJDA 4IZ6A 2KWLA 2CGQA 4CA3A 4BPFA 2DNWA 2KOPA 4HKGA 2PNGA 4PWVB 3EJEA 1F80D 2FADA 2FHSC 2EHSA 4BPHA 1HY8A 2XZ1C 4PXHB 2LOLA 1DV5A 1DNYA 2L4BA 2FAEA 2N5IA 2LPKA 2KGDA 2AFEA 2ROQA 2KR5A 2K94A 2LIWA 2JU1A 2XZ0D 1L0HA 2CNRA 2N50A 1NQ4A 2K93A 1OR5A 2N6YA 2K2QA 2LTEA 2K92A 3EJBA 2KG6A 2KG8A 2JU2A 2KGAA 1X3OA 1HQBA 2FQ0A 2KGCA 5CZDB 2GDWA 2M5RA 5EJDA 2AFDA 4NEOA 3LMOA 4MRTC 1AF8A 2FVFA 2MR8A 2KGEA 2KOQA 5HV8A 5HVCA 2FQ2A 4H2WC 5KP7B 2KOSA 1VKUA 2KORA 2AF8A 5KP6B 2MY5A 2GDXA 2N5HA 2JQ4A 2MVVA 2L0QA 2FACA 2L22A 2N98A 2MF4A 5KP8B 2JGPA 2MVUA 2AVAA 4R0MA 2QNWA 2MR7A 4H2XC 4DG9A 2EHTA 2LL8A 2KW2A 3RG2A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3GZM A;  2MD9 A;  2LML A;  2CG5 B;  2L9F A;  2FVA A;  4BPG A;  2CQ8 A;  1T8K A;  2FVE A;  2K0X A;  2LIU A;  3GZL A;  2VSQ A;  1L0I A;  2KOO A;  3CE7 A;  2FQ1 A;  2K0Y A;  2GDY A;  2KG9 A;  2N6Z A;  2LKI A;  1ACP A;  4H2Y C;  1KLP A;  3NY7 B;  2X2B A;  3EJD A;  4IZ6 A;  2KWL A;  2CGQ A;  4CA3 A;  4BPF A;  2DNW A;  2KOP A;  4HKG A;  2PNG A;  4PWV B;  3EJE A;  1F80 D;  2FAD A;  2FHS C;  2EHS A;  4BPH A;  1HY8 A;  2XZ1 C;  4PXH B;  2LOL A;  1DV5 A;  1DNY A;  2L4B A;  2FAE A;  2N5I A;  2LPK A;  2KGD A;  2AFE A;  2ROQ A;  2KR5 A;  2K94 A;  2LIW A;  2JU1 A;  2XZ0 D;  1L0H A;  2CNR A;  2N50 A;  1NQ4 A;  2K93 A;  1OR5 A;  2N6Y A;  2K2Q A;  2LTE A;  2K92 A;  3EJB A;  2KG6 A;  2KG8 A;  2JU2 A;  2KGA A;  1X3O A;  1HQB A;  2FQ0 A;  2KGC A;  5CZD B;  2GDW A;  2M5R A;  5EJD A;  2AFD A;  4NEO A;  3LMO A;  4MRT C;  1AF8 A;  2FVF A;  2MR8 A;  2KGE A;  2KOQ A;  5HV8 A;  5HVC A;  2FQ2 A;  4H2W C;  5KP7 B;  2KOS A;  1VKU A;  2KOR A;  2AF8 A;  5KP6 B;  2MY5 A;  2GDX A;  2N5H A;  2JQ4 A;  2MVV A;  2L0Q A;  2FAC A;  2L22 A;  2N98 A;  2MF4 A;  5KP8 B;  2JGP A;  2MVU A;  2AVA A;  4R0M A;  2QNW A;  2MR7 A;  4H2X C;  4DG9 A;  2EHT A;  2LL8 A;  2KW2 A;  3RG2 A; 
#chains in the Genus database with same CATH topology
 2P9X A;  2LML A;  1S72 P;  2FVE A;  2VSQ A;  3I55 P;  3MGE A;  1L0I A;  3DS2 A;  4PH0 A;  4COC A;  2KG9 A;  2N6Z A;  2EG5 A;  2Z46 A;  1QRJ A;  3H47 A;  3CCU P;  3G4S P;  2JO0 A;  4U0F A;  2ONT A;  4IZ6 A;  3CXC O;  4UHP B;  1M74 A;  3B5I A;  4PWV B;  3EJE A;  1VQ9 P;  2FAD A;  2FHS C;  2EHS A;  4BPH A;  1HY8 A;  2JB0 A;  2XZ1 C;  1YJW P;  3G0V A;  1Q82 Q;  4F37 A;  1DNY A;  4M0I A;  2N5I A;  2LPK A;  3LRY A;  2AFE A;  2KR5 A;  2K94 A;  2LIW A;  2GZI A;  1ZNV A;  1OR5 A;  5F2O A;  3CME P;  5HGM A;  3EJB A;  3G1G A;  1MZ8 A;  2JU2 A;  2KGA A;  2KG8 A;  4XRQ A;  2KGC A;  3DPH A;  1UJZ A;  1VQ5 P;  2KGE A;  2KOQ A;  1ZMB A;  1AUM A;  2FQ2 A;  7CEI A;  1M90 Q;  1IMQ A;  2PEQ A;  1VHN A;  2OTL P;  2EIA A;  2L0Q A;  1EIA A;  2PEO A;  5KP8 B;  3B4Q A;  2JGP A;  3G29 A;  2MR7 A;  4DG9 A;  3RG2 A;  5EW5 E;  2DGY A;  4PH1 A;  1Q7Y Q;  2CG5 B;  2L9F A;  1QVG O;  4BPG A;  4U0E A;  3I56 P;  2XV6 A;  1VQO P;  2LIU A;  3GZL A;  1Z6M A;  3CE7 A;  1BXI A;  2JYG A;  3DS5 A;  5HGO A;  4H2Y C;  2GZG A;  3DTJ A;  3HZQ A;  3NY7 B;  1N8R Q;  3CC7 P;  2CGQ A;  1D1D A;  2DNW A;  1GXH A;  2PNG A;  3CC2 P;  1K8A Q;  2VLO A;  4U0D A;  4PXH B;  2LOL A;  2PY8 A;  1YJ9 P;  2L4B A;  3DS3 A;  1NJI Q;  3DS0 A;  1KD1 Q;  3DS1 A;  2JU1 A;  2XT1 A;  2XZ0 D;  2L6E A;  3RG6 C;  1NQ4 A;  2K93 A;  3DS4 A;  2BUO A;  2LTE A;  3U43 A;  4COP A;  1KC8 Q;  5CZD B;  1EMV A;  3CCQ P;  5EJD A;  3NTE A;  4NEO A;  2M8L A;  3H4E A;  2K5X A;  2PEN A;  5KP7 B;  2KOS A;  2PEK A;  2MY5 A;  1AYI A;  1VQK P;  4IPY A;  2OTJ P;  1YHQ P;  1E0H A;  1KQS O;  2Z44 A;  4GR6 A;  1VQP P;  2QNW A;  4H2X C;  1VQ6 P;  1VQM P;  1M1K Q;  3GZM A;  2GZF A;  4XFY A;  2GYK A;  2MD9 A;  5HGN A;  3CCJ P;  2FVA A;  1YI2 P;  1CEI A;  2CQ8 A;  1T8K A;  1E6J P;  3P05 A;  2KOO A;  2FQ1 A;  2Z45 A;  2QA4 P;  3CD6 P;  1ACP A;  5F2N A;  2LF4 A;  2X2B A;  4U0A A;  2KWL A;  3CCR P;  1VQ7 P;  1K73 Q;  2OAR A;  4CA3 A;  2PEJ A;  2JYL A;  4WYM A;  4BPF A;  2KOP A;  1F80 D;  1RNI A;  3CCM P;  1DV5 A;  3CMA P;  2GZE A;  2FAE A;  3G6E P;  2KGD A;  2PEM A;  5I4T G;  3WBH A;  1L0H A;  2N50 A;  1UNK A;  2K2Q A;  3OW2 O;  2K92 A;  1A8O A;  4U0B A;  2KG6 A;  1VQL P;  1X3O A;  1HQB A;  1Q86 Q;  5JPA A;  3LMO A;  2MR8 A;  2CWO A;  5HV8 A;  3M1M A;  1VKU A;  1Q81 Q;  2N5H A;  2VLP A;  3G1I A;  2L22 A;  4QKO A;  2N98 A;  2M8P A;  3CCS P;  1QVF O;  4XFZ A;  2MVU A;  1YIT P;  1EOQ A;  2NO8 A;  2EHT A;  1VQ4 P;  2ERH A;  2KW2 A;  5DCK A;  2VLN A;  3G28 A;  4GR2 A;  5BS2 A;  4XFX A;  2GZJ A;  1FR2 A;  4XRO A;  1K9M Q;  2K0X A;  1RO2 A;  3HYB A;  1GPJ A;  1W2B O;  1M6E X;  2XXM A;  2K0Y A;  2GDY A;  3G21 A;  2LKI A;  4U0C A;  1KLP A;  3EJD A;  3G26 A;  2WPT A;  2QEX P;  3CC4 P;  3Q20 A;  3CCV P;  3CCE P;  5F2K A;  4HKG A;  4QNB A;  1VQ8 P;  1IUQ A;  5HGL A;  1VQN P;  1RO0 A;  1IMP A;  3G71 P;  2JBG A;  2ROQ A;  1M6N A;  2KOD A;  2PEI A;  2CNR A;  1GXG A;  2N6Y A;  1K30 A;  2FQ0 A;  2GDW A;  2M5R A;  2AFD A;  1JJ2 O;  2JAZ A;  5BS1 A;  3H0D A;  4MRT C;  1AF8 A;  2FVF A;  1YJN P;  1BAJ A;  3CPW O;  5HVC A;  4H2W C;  3VRL C;  2KOR A;  2AF8 A;  2EFJ A;  3E2D A;  5KP6 B;  2GDX A;  2VLQ A;  1A43 A;  2JQ4 A;  2MVV A;  2FAC A;  3CCL P;  2E1M A;  2MF4 A;  2BHV A;  3GJN A;  3GKL C;  2AVA A;  4R0M A;  2M8N A;  2K0D X;  2LL8 A;  1YIJ P; 
#chains in the Genus database with same CATH homology
 3GZM A;  2MD9 A;  2LML A;  2CG5 B;  2L9F A;  2FVA A;  4BPG A;  2CQ8 A;  1T8K A;  2FVE A;  2K0X A;  2LIU A;  3GZL A;  2VSQ A;  1L0I A;  2KOO A;  3CE7 A;  2FQ1 A;  2K0Y A;  2GDY A;  2KG9 A;  2N6Z A;  2LKI A;  1ACP A;  4H2Y C;  1KLP A;  3NY7 B;  2X2B A;  3EJD A;  4IZ6 A;  2KWL A;  2CGQ A;  4CA3 A;  4BPF A;  2DNW A;  2KOP A;  4HKG A;  2PNG A;  4PWV B;  3EJE A;  1F80 D;  2FAD A;  2FHS C;  2EHS A;  4BPH A;  1HY8 A;  2XZ1 C;  4PXH B;  2LOL A;  1DV5 A;  1DNY A;  2L4B A;  2FAE A;  2N5I A;  2LPK A;  2KGD A;  2AFE A;  2ROQ A;  2KR5 A;  2K94 A;  2LIW A;  2JU1 A;  2XZ0 D;  1L0H A;  2CNR A;  2N50 A;  1NQ4 A;  2K93 A;  1OR5 A;  2N6Y A;  2K2Q A;  2LTE A;  2K92 A;  3EJB A;  2KG6 A;  2KG8 A;  2JU2 A;  2KGA A;  1X3O A;  1HQB A;  2FQ0 A;  2KGC A;  5CZD B;  2GDW A;  2M5R A;  5EJD A;  2AFD A;  4NEO A;  3LMO A;  4MRT C;  1AF8 A;  2FVF A;  2MR8 A;  2KGE A;  2KOQ A;  5HV8 A;  5HVC A;  2FQ2 A;  4H2W C;  5KP7 B;  2KOS A;  1VKU A;  2KOR A;  2AF8 A;  5KP6 B;  2MY5 A;  2GDX A;  2N5H A;  2JQ4 A;  2MVV A;  2L0Q A;  2FAC A;  2L22 A;  2N98 A;  2MF4 A;  5KP8 B;  2JGP A;  2MVU A;  2AVA A;  4R0M A;  2QNW A;  2MR7 A;  4H2X C;  4DG9 A;  2EHT A;  2LL8 A;  2KW2 A;  3RG2 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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