2KG6A

Solution structure of the acetyl actinorhodin acyl carrier protein from streptomyces coelicolor
Total Genus 23
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
23
sequence length
86
structure length
86
Chain Sequence
MATLLTTDDLRRALVESAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Probing the Interactions of Early Polyketide Intermediates with the Actinorhodin ACP from S. coelicolor A3(2).
pubmed doi rcsb
source organism Streptomyces coelicolor
molecule tags Biosynthetic protein
molecule keywords Actinorhodin polyketide synthase acyl carrier protein
total genus 23
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 2009-03-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2kg6A00
1KLPA 2KR5A 4CA3A 3NY7B 2K0YA 2FVAA 1HY8A 4MRTC 2DNWA 1DNYA 2JU1A 2KOPA 2FACA 4IZ6A 2LKIA 3EJBA 3RG2A 3EJEA 2L9FA 2AFEA 2JQ4A 2KGDA 2GDYA 5CZDB 2ROQA 1VKUA 2LPKA 1F80D 5KP6B 2KWLA 2MR7A 5KP8B 2KG6A 2K93A 2EHTA 2KORA 2LOLA 2LL8A 2FQ1A 4BPHA 2MVUA 2FQ0A 2CGQA 2GDXA 4H2XC 2FAEA 4NEOA 2CG5B 1AF8A 2K92A 2K2QA 2XZ0D 2KW2A 2KGAA 2N5IA 3CE7A 2MF4A 4H2YC 2GDWA 2K0XA 3GZMA 2X2BA 4H2WC 1DV5A 2AVAA 1L0HA 3GZLA 1HQBA 1T8KA 2FVEA 2MR8A 2XZ1C 1NQ4A 2FVFA 2KGCA 5HV8A 1OR5A 2L0QA 2M5RA 2KGEA 4BPGA 4PXHB 1X3OA 2K94A 2FADA 2AFDA 2L22A 2CNRA 2MVVA 3LMOA 2EHSA 4R0MA 1ACPA 2FQ2A 2QNWA 2KOQA 2CQ8A 4PWVB 5KP7B 2LTEA 2KG8A 2PNGA 2KOOA 2L4BA 2N50A 2KG9A 2VSQA 2N5HA 3EJDA 4DG9A 5EJDA 2LIUA 2LMLA 2LIWA 2MD9A 4BPFA 2FHSC 2AF8A 2N6ZA 2JU2A 2JGPA 5HVCA 1L0IA 2N98A 2N6YA 4HKGA 2KOSA 2MY5A
chains in the Genus database with same CATH superfamily
2EFJA 2BHVA 2KR5A 4CA3A 1HY8A 1BAJA 2JU1A 2VLQA 3RG2A 4XFYA 3EJEA 2GDYA 2ROQA 2XV6A 5KP6B 2PEIA 5KP8B 2Z44A 1EOQA 3M1MA 2FQ0A 2OTLP 2OTJP 1RNIA 1Q81Q 2JYLA 3DS4A 1Q82Q 3DS3A 1UNKA 1YJWP 2K92A 2GZIA 2K2QA 2JO0A 2KGAA 4H2YC 2GDWA 5F2NA 1QRJA 1W2BO 1DV5A 2AVAA 2JB0A 1HQBA 1T8KA 2MR8A 2XZ1C 1NQ4A 2GZJA 1CEIA 2KGEA 2M8NA 1K30A 2K94A 3P05A 2FADA 2JAZA 2JYGA 2CNRA 4PH1A 3DPHA 4XFXA 3RG6C 2N50A 2KG9A 2P9XA 2VSQA 5HGMA 4GR6A 2GYKA 1YJNP 1QVFO 1YITP 1VQKP 2LF4A 1EMVA 2N6ZA 2VLNA 1IMPA 3OW2O 1BXIA 3CMAP 1KLPA 1VQ5P 1NJIQ 1VQOP 4U0FA 3NY7B 4MRTC 3CCMP 2KOPA 1A8OA 2FACA 2LKIA 3CC7P 2L9FA 2ONTA 1E6JP 1E0HA 1VKUA 3I55P 5F2KA 3G4SP 3CCQP 1AUMA 4UHPB 2KG6A 2K93A 2LL8A 1K73Q 1VQ9P 4COCA 1IUQA 4H2XC 4U0CA 3HYBA 3CCLP 3G1GA 1AF8A 1YHQP 1VQ4P 3G21A 5HGLA 2KW2A 2N5IA 1FR2A 4GR2A 3NTEA 1Z6MA 2X2BA 5JPAA 3I56P 2FVFA 1VHNA 4QNBA 2KGCA 5HV8A 1YJ9P 3CD6P 1VQ8P 3H4EA 3B5IA 2PEMA 5BS2A 2WPTA 2PEKA 2L22A 2EG5A 2VLPA 1KC8Q 2E1MA 3DS2A 3CC4P 4R0MA 1ACPA 2KOQA 4PWVB 2LTEA 2PNGA 2KOOA 3EJDA 1KQSO 2MD9A 1YI2P 1VQLP 2FHSC 2L6EA 2Z45A 3CCRP 2GZGA 1JJ2O 4U0BA 2PEJA 2PENA 4HKGA 3G28A 2KOSA 2MY5A 1YIJP 1GXGA 3CCVP 1M74A 3CCSP 4QKOA 3DTJA 5HGNA 1QVGO 2KWLA 2GZEA 3Q20A 1ZMBA 5I4TG 2EHTA 2LOLA 1N8RQ 1D1DA 3G0VA 2FQ1A 4BPHA 2PEQA 5DCKA 3CCUP 2CG5B 4XFZA 1AYIA 3CE7A 2K5XA 2K0XA 3GZMA 4H2WC 1GPJA 1L0HA 3GZLA 3MGEA 1MZ8A 1OR5A 2M5RA 3LRYA 3DS5A 1UJZA 5F2OA 2PY8A 4PXHB 3GKLC 2AFDA 7CEIA 2QEXP 2XXMA 2VLOA 4WYMA 2EHSA 2QNWA 5KP7B 4XROA 2KG8A 1M6EX 3CXCO 4F37A 5EW5E 3G26A 5EJDA 2LIUA 1VQ6P 2LMLA 2M8PA 1M90Q 4BPFA 3U43A 3H0DA 1K8AQ 3WBHA 2KODA 3B4QA 3CC2P 2NO8A 5HVCA 2N98A 4XRQA 4U0EA 3CCJP 1Q7YQ 2QA4P 1EIAA 2K0YA 2FVAA 2DNWA 3G6EP 1DNYA 3G29A 3DS0A 3H47A 1VQ7P 4IZ6A 2JBGA 3EJBA 1VQPP 2AFEA 2JQ4A 2KGDA 3HZQA 3E2DA 5CZDB 2LPKA 1F80D 2DGYA 1A43A 2MR7A 4U0AA 2KORA 4IPYA 1RO2A 2MVUA 3DS1A 1KD1Q 2CGQA 2GDXA 3CCEP 2FAEA 3CMEP 2K0DX 4NEOA 2EIAA 2ERHA 1VQNP 2XZ0D 1ZNVA 2MF4A 2M8LA 2FVEA 1RO0A 1K9MQ 2L0QA 4M0IA 4BPGA 1X3OA 1M1KQ 2PEOA 1Q86Q 2MVVA 5BS1A 3LMOA 2Z46A 2FQ2A 3G71P 2CQ8A 1IMQA 2L4BA 3GJNA 5HGOA 2N5HA 4DG9A 2CWOA 4COPA 2LIWA 1M6NA 3VRLC 3CPWO 2AF8A 1VQMP 4PH0A 2JU2A 2JGPA 1S72P 2GZFA 2BUOA 1GXHA 2XT1A 1L0IA 3G1IA 2N6YA 2OARA 4U0DA
chains in the Genus database with same CATH topology
1KLPA 2KR5A 4CA3A 3NY7B 2K0YA 2FVAA 1HY8A 4MRTC 2DNWA 1DNYA 2JU1A 2KOPA 2FACA 4IZ6A 2LKIA 3EJBA 3RG2A 3EJEA 2L9FA 2AFEA 2JQ4A 2KGDA 2GDYA 5CZDB 2ROQA 1VKUA 2LPKA 1F80D 5KP6B 2KWLA 2MR7A 5KP8B 2KG6A 2K93A 2EHTA 2KORA 2LOLA 2LL8A 2FQ1A 4BPHA 2MVUA 2FQ0A 2CGQA 2GDXA 4H2XC 2FAEA 4NEOA 2CG5B 1AF8A 2K92A 2K2QA 2XZ0D 2KW2A 2KGAA 2N5IA 3CE7A 2MF4A 4H2YC 2GDWA 2K0XA 3GZMA 2X2BA 4H2WC 1DV5A 2AVAA 1L0HA 3GZLA 1HQBA 1T8KA 2FVEA 2MR8A 2XZ1C 1NQ4A 2FVFA 2KGCA 5HV8A 1OR5A 2L0QA 2M5RA 2KGEA 4BPGA 4PXHB 1X3OA 2K94A 2FADA 2AFDA 2L22A 2CNRA 2MVVA 3LMOA 2EHSA 4R0MA 1ACPA 2FQ2A 2QNWA 2KOQA 2CQ8A 4PWVB 5KP7B 2LTEA 2KG8A 2PNGA 2KOOA 2L4BA 2N50A 2KG9A 2VSQA 2N5HA 3EJDA 4DG9A 5EJDA 2LIUA 2LMLA 2LIWA 2MD9A 4BPFA 2FHSC 2AF8A 2N6ZA 2JU2A 2JGPA 5HVCA 1L0IA 2N98A 2N6YA 4HKGA 2KOSA 2MY5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1KLP A;  2KR5 A;  4CA3 A;  3NY7 B;  2K0Y A;  2FVA A;  1HY8 A;  4MRT C;  2DNW A;  1DNY A;  2JU1 A;  2KOP A;  2FAC A;  4IZ6 A;  2LKI A;  3EJB A;  3RG2 A;  3EJE A;  2L9F A;  2AFE A;  2JQ4 A;  2KGD A;  2GDY A;  5CZD B;  2ROQ A;  1VKU A;  2LPK A;  1F80 D;  5KP6 B;  2KWL A;  2MR7 A;  5KP8 B;  2KG6 A;  2K93 A;  2EHT A;  2KOR A;  2LOL A;  2LL8 A;  2FQ1 A;  4BPH A;  2MVU A;  2FQ0 A;  2CGQ A;  2GDX A;  4H2X C;  2FAE A;  4NEO A;  2CG5 B;  1AF8 A;  2K92 A;  2K2Q A;  2XZ0 D;  2KW2 A;  2KGA A;  2N5I A;  3CE7 A;  2MF4 A;  4H2Y C;  2GDW A;  2K0X A;  3GZM A;  2X2B A;  4H2W C;  1DV5 A;  2AVA A;  1L0H A;  3GZL A;  1HQB A;  1T8K A;  2FVE A;  2MR8 A;  2XZ1 C;  1NQ4 A;  2FVF A;  2KGC A;  5HV8 A;  1OR5 A;  2L0Q A;  2M5R A;  2KGE A;  4BPG A;  4PXH B;  1X3O A;  2K94 A;  2FAD A;  2AFD A;  2L22 A;  2CNR A;  2MVV A;  3LMO A;  2EHS A;  4R0M A;  1ACP A;  2FQ2 A;  2QNW A;  2KOQ A;  2CQ8 A;  4PWV B;  5KP7 B;  2LTE A;  2KG8 A;  2PNG A;  2KOO A;  2L4B A;  2N50 A;  2KG9 A;  2VSQ A;  2N5H A;  3EJD A;  4DG9 A;  5EJD A;  2LIU A;  2LML A;  2LIW A;  2MD9 A;  4BPF A;  2FHS C;  2AF8 A;  2N6Z A;  2JU2 A;  2JGP A;  5HVC A;  1L0I A;  2N98 A;  2N6Y A;  4HKG A;  2KOS A;  2MY5 A; 
#chains in the Genus database with same CATH topology
 2EFJ A;  2BHV A;  2KR5 A;  4CA3 A;  1HY8 A;  1BAJ A;  2JU1 A;  2VLQ A;  3RG2 A;  4XFY A;  3EJE A;  2GDY A;  2ROQ A;  2XV6 A;  5KP6 B;  2PEI A;  5KP8 B;  2Z44 A;  1EOQ A;  3M1M A;  2FQ0 A;  2OTL P;  2OTJ P;  1RNI A;  1Q81 Q;  2JYL A;  3DS4 A;  1Q82 Q;  3DS3 A;  1UNK A;  1YJW P;  2K92 A;  2GZI A;  2K2Q A;  2JO0 A;  2KGA A;  4H2Y C;  2GDW A;  5F2N A;  1QRJ A;  1W2B O;  1DV5 A;  2AVA A;  2JB0 A;  1HQB A;  1T8K A;  2MR8 A;  2XZ1 C;  1NQ4 A;  2GZJ A;  1CEI A;  2KGE A;  2M8N A;  1K30 A;  2K94 A;  3P05 A;  2FAD A;  2JAZ A;  2JYG A;  2CNR A;  4PH1 A;  3DPH A;  4XFX A;  3RG6 C;  2N50 A;  2KG9 A;  2P9X A;  2VSQ A;  5HGM A;  4GR6 A;  2GYK A;  1YJN P;  1QVF O;  1YIT P;  1VQK P;  2LF4 A;  1EMV A;  2N6Z A;  2VLN A;  1IMP A;  3OW2 O;  1BXI A;  3CMA P;  1KLP A;  1VQ5 P;  1NJI Q;  1VQO P;  4U0F A;  3NY7 B;  4MRT C;  3CCM P;  2KOP A;  1A8O A;  2FAC A;  2LKI A;  3CC7 P;  2L9F A;  2ONT A;  1E6J P;  1E0H A;  1VKU A;  3I55 P;  5F2K A;  3G4S P;  3CCQ P;  1AUM A;  4UHP B;  2KG6 A;  2K93 A;  2LL8 A;  1K73 Q;  1VQ9 P;  4COC A;  1IUQ A;  4H2X C;  4U0C A;  3HYB A;  3CCL P;  3G1G A;  1AF8 A;  1YHQ P;  1VQ4 P;  3G21 A;  5HGL A;  2KW2 A;  2N5I A;  1FR2 A;  4GR2 A;  3NTE A;  1Z6M A;  2X2B A;  5JPA A;  3I56 P;  2FVF A;  1VHN A;  4QNB A;  2KGC A;  5HV8 A;  1YJ9 P;  3CD6 P;  1VQ8 P;  3H4E A;  3B5I A;  2PEM A;  5BS2 A;  2WPT A;  2PEK A;  2L22 A;  2EG5 A;  2VLP A;  1KC8 Q;  2E1M A;  3DS2 A;  3CC4 P;  4R0M A;  1ACP A;  2KOQ A;  4PWV B;  2LTE A;  2PNG A;  2KOO A;  3EJD A;  1KQS O;  2MD9 A;  1YI2 P;  1VQL P;  2FHS C;  2L6E A;  2Z45 A;  3CCR P;  2GZG A;  1JJ2 O;  4U0B A;  2PEJ A;  2PEN A;  4HKG A;  3G28 A;  2KOS A;  2MY5 A;  1YIJ P;  1GXG A;  3CCV P;  1M74 A;  3CCS P;  4QKO A;  3DTJ A;  5HGN A;  1QVG O;  2KWL A;  2GZE A;  3Q20 A;  1ZMB A;  5I4T G;  2EHT A;  2LOL A;  1N8R Q;  1D1D A;  3G0V A;  2FQ1 A;  4BPH A;  2PEQ A;  5DCK A;  3CCU P;  2CG5 B;  4XFZ A;  1AYI A;  3CE7 A;  2K5X A;  2K0X A;  3GZM A;  4H2W C;  1GPJ A;  1L0H A;  3GZL A;  3MGE A;  1MZ8 A;  1OR5 A;  2M5R A;  3LRY A;  3DS5 A;  1UJZ A;  5F2O A;  2PY8 A;  4PXH B;  3GKL C;  2AFD A;  7CEI A;  2QEX P;  2XXM A;  2VLO A;  4WYM A;  2EHS A;  2QNW A;  5KP7 B;  4XRO A;  2KG8 A;  1M6E X;  3CXC O;  4F37 A;  5EW5 E;  3G26 A;  5EJD A;  2LIU A;  1VQ6 P;  2LML A;  2M8P A;  1M90 Q;  4BPF A;  3U43 A;  3H0D A;  1K8A Q;  3WBH A;  2KOD A;  3B4Q A;  3CC2 P;  2NO8 A;  5HVC A;  2N98 A;  4XRQ A;  4U0E A;  3CCJ P;  1Q7Y Q;  2QA4 P;  1EIA A;  2K0Y A;  2FVA A;  2DNW A;  3G6E P;  1DNY A;  3G29 A;  3DS0 A;  3H47 A;  1VQ7 P;  4IZ6 A;  2JBG A;  3EJB A;  1VQP P;  2AFE A;  2JQ4 A;  2KGD A;  3HZQ A;  3E2D A;  5CZD B;  2LPK A;  1F80 D;  2DGY A;  1A43 A;  2MR7 A;  4U0A A;  2KOR A;  4IPY A;  1RO2 A;  2MVU A;  3DS1 A;  1KD1 Q;  2CGQ A;  2GDX A;  3CCE P;  2FAE A;  3CME P;  2K0D X;  4NEO A;  2EIA A;  2ERH A;  1VQN P;  2XZ0 D;  1ZNV A;  2MF4 A;  2M8L A;  2FVE A;  1RO0 A;  1K9M Q;  2L0Q A;  4M0I A;  4BPG A;  1X3O A;  1M1K Q;  2PEO A;  1Q86 Q;  2MVV A;  5BS1 A;  3LMO A;  2Z46 A;  2FQ2 A;  3G71 P;  2CQ8 A;  1IMQ A;  2L4B A;  3GJN A;  5HGO A;  2N5H A;  4DG9 A;  2CWO A;  4COP A;  2LIW A;  1M6N A;  3VRL C;  3CPW O;  2AF8 A;  1VQM P;  4PH0 A;  2JU2 A;  2JGP A;  1S72 P;  2GZF A;  2BUO A;  1GXH A;  2XT1 A;  1L0I A;  3G1I A;  2N6Y A;  2OAR A;  4U0D A; 
#chains in the Genus database with same CATH homology
 1KLP A;  2KR5 A;  4CA3 A;  3NY7 B;  2K0Y A;  2FVA A;  1HY8 A;  4MRT C;  2DNW A;  1DNY A;  2JU1 A;  2KOP A;  2FAC A;  4IZ6 A;  2LKI A;  3EJB A;  3RG2 A;  3EJE A;  2L9F A;  2AFE A;  2JQ4 A;  2KGD A;  2GDY A;  5CZD B;  2ROQ A;  1VKU A;  2LPK A;  1F80 D;  5KP6 B;  2KWL A;  2MR7 A;  5KP8 B;  2KG6 A;  2K93 A;  2EHT A;  2KOR A;  2LOL A;  2LL8 A;  2FQ1 A;  4BPH A;  2MVU A;  2FQ0 A;  2CGQ A;  2GDX A;  4H2X C;  2FAE A;  4NEO A;  2CG5 B;  1AF8 A;  2K92 A;  2K2Q A;  2XZ0 D;  2KW2 A;  2KGA A;  2N5I A;  3CE7 A;  2MF4 A;  4H2Y C;  2GDW A;  2K0X A;  3GZM A;  2X2B A;  4H2W C;  1DV5 A;  2AVA A;  1L0H A;  3GZL A;  1HQB A;  1T8K A;  2FVE A;  2MR8 A;  2XZ1 C;  1NQ4 A;  2FVF A;  2KGC A;  5HV8 A;  1OR5 A;  2L0Q A;  2M5R A;  2KGE A;  4BPG A;  4PXH B;  1X3O A;  2K94 A;  2FAD A;  2AFD A;  2L22 A;  2CNR A;  2MVV A;  3LMO A;  2EHS A;  4R0M A;  1ACP A;  2FQ2 A;  2QNW A;  2KOQ A;  2CQ8 A;  4PWV B;  5KP7 B;  2LTE A;  2KG8 A;  2PNG A;  2KOO A;  2L4B A;  2N50 A;  2KG9 A;  2VSQ A;  2N5H A;  3EJD A;  4DG9 A;  5EJD A;  2LIU A;  2LML A;  2LIW A;  2MD9 A;  4BPF A;  2FHS C;  2AF8 A;  2N6Z A;  2JU2 A;  2JGP A;  5HVC A;  1L0I A;  2N98 A;  2N6Y A;  4HKG A;  2KOS A;  2MY5 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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