2KR5A

Solution structure of an acyl carrier protein domain from fungal type i polyketide synthase
Total Genus 20
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
20
sequence length
89
structure length
89
Chain Sequence
AMAKGVGVSNEKLDAVMRVVSEESGIALEELTDDSNFADMGIDSLSSMVIGSRFREDLGLDLGPEFSLFIDCTTVRALKDFMLGSGDAG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
source organism Aspergillus parasiticus
publication title Solution structure of an acyl carrier protein domain from a fungal type I polyketide synthase.
pubmed doi rcsb
molecule keywords Aflatoxin biosynthesis polyketide synthase
total genus 20
structure length 89
sequence length 89
ec nomenclature ec 2.3.1.221: Noranthrone synthase.
pdb deposition date 2009-12-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2kr5A01
2LL8A 2K0XA 2K94A 4H2WC 2AF8A 2KGAA 2K93A 2XZ1C 4HKGA 4NEOA 2N50A 2KWLA 2MR8A 2KOOA 2LKIA 2XZ0D 5HV8A 2FAEA 2MR7A 2AFDA 4PXHB 2N5IA 2KGDA 4MRTC 5KP8B 1X3OA 1KLPA 2KR5A 4H2YC 2K0YA 1NQ4A 2JQ4A 2M5RA 2KG8A 2MVVA 1ACPA 4CA3A 2N5HA 2KG6A 4BPGA 2QNWA 2N98A 2FQ2A 2AFEA 2L4BA 2CGQA 1OR5A 3GZLA 3LMOA 2MF4A 5HVCA 2CG5B 2L0QA 2GDWA 1L0HA 2ROQA 1HY8A 3EJEA 2GDYA 3NY7B 2FACA 2MD9A 1L0IA 2LIUA 2KOQA 2KORA 2X2BA 4BPHA 4H2XC 2FADA 3CE7A 2DNWA 2FVAA 2EHTA 3EJBA 2LMLA 2N6ZA 1T8KA 1DNYA 2CNRA 2KOSA 2EHSA 2KGCA 2JGPA 2K92A 5EJDA 2PNGA 2KW2A 2FVFA 2LIWA 2LOLA 2LTEA 2AVAA 2FVEA 2FHSC 3EJDA 5CZDB 2KG9A 3GZMA 1VKUA 5KP7B 1DV5A 2LPKA 2L9FA 2FQ0A 4R0MA 2MY5A 2FQ1A 1AF8A 2JU2A 2K2QA 3RG2A 1HQBA 4BPFA 4DG9A 5KP6B 1F80D 2N6YA 4PWVB 2L22A 2VSQA 4IZ6A 2GDXA 2JU1A 2KGEA 2KOPA 2CQ8A 2MVUA
chains in the Genus database with same CATH superfamily
4U0DA 2AF8A 4HKGA 2PEIA 2DGYA 1VQ9P 1D1DA 4PXHB 1QVFO 2KGDA 4MRTC 3CXCO 1KLPA 3MGEA 1VQLP 4H2YC 2XV6A 1NQ4A 2K0DX 2M8PA 2XT1A 5EW5E 2QNWA 2JBGA 1BXIA 2FQ2A 2PEJA 3G28A 2JYLA 2BUOA 3DTJA 3GZLA 3LMOA 1RNIA 1QRJA 4QNBA 1M6NA 3CCQP 3CC2P 2FACA 1A43A 1VQ8P 2LIUA 2KORA 1S72P 3EJBA 1YJWP 4F37A 2CNRA 1EIAA 3G6EP 2JGPA 2K92A 2PNGA 2LTEA 3B4QA 3EJDA 4U0BA 1N8RQ 5CZDB 1IMQA 2GZGA 3CMAP 3Q20A 1ZNVA 1AF8A 2JU2A 4GR2A 2PEOA 1F80D 2N6YA 5DCKA 4PWVB 1YIJP 2VSQA 3RG6C 2GDXA 2JU1A 1CEIA 2GZJA 5F2KA 1RO0A 2M8NA 2K94A 4H2WC 2EIAA 2KGAA 2NO8A 1AYIA 4XROA 2KWLA 2MR8A 2XZ0D 1QVGO 2FAEA 2MR7A 2K5XA 5HGNA 2WPTA 3CCJP 3G1GA 1VQ6P 3G4SP 1YHQP 5I4TG 2PEMA 2M5RA 2KG8A 2BHVA 3DS5A 4PH0A 3CCUP 4BPGA 3DS2A 2JYGA 3VRLC 1KQSO 1VHNA 1E0HA 2L4BA 2CGQA 1OR5A 3CMEP 5HVCA 2CG5B 2EG5A 2GDWA 1L0HA 2GZFA 3M1MA 3EJEA 3U43A 2QA4P 1KD1Q 1RO2A 2MD9A 5BS1A 4BPHA 2X2BA 1E6JP 3I55P 2Z44A 2EHTA 2OARA 2ERHA 2PEQA 1EMVA 2EHSA 2KGCA 1M74A 4U0AA 2JB0A 2LOLA 3GJNA 1VQNP 2AVAA 4GR6A 2M8LA 2FHSC 1IMPA 3LRYA 3HZQA 2QEXP 2MY5A 4UHPB 1Q81Q 3H4EA 1YJNP 1K8AQ 5KP6B 1VQKP 3CC7P 1UNKA 5F2NA 4XRQA 4IZ6A 3GKLC 3DS3A 1KC8Q 2CQ8A 1W2BO 3G26A 2LL8A 4COCA 2P9XA 1BAJA 4U0EA 1YI2P 4WYMA 5HV8A 3WBHA 2EFJA 1X3OA 1VQ5P 2KR5A 2VLNA 2K0YA 1FR2A 1VQ7P 2Z46A 2OTLP 2MVVA 1ACPA 4CA3A 2XXMA 2N5HA 1GPJA 5JPAA 5HGOA 3H47A 2N98A 3CCEP 2AFEA 2MF4A 2L0QA 3G29A 1IUQA 3NY7B 2VLQA 3CC4P 1UJZA 2KOQA 1A8OA 4H2XC 2FADA 3H0DA 3CE7A 1YJ9P 5BS2A 2DNWA 2LMLA 2N6ZA 2CWOA 4IPYA 1M6EX 1T8KA 1DNYA 5F2OA 2KOSA 5EJDA 2KW2A 2PENA 1M1KQ 3CCSP 1YITP 2KG9A 3GZMA 3CPWO 1GXHA 2LPKA 2L9FA 2FQ0A 4R0MA 1Q7YQ 4U0FA 3RG2A 2PEKA 2ONTA 3B5IA 4BPFA 4DG9A 1VQMP 4XFZA 1MZ8A 1K73Q 2L22A 2VLPA 3DPHA 2PY8A 3P05A 3G21A 4QKOA 3HYBA 2K0XA 4NEOA 2K93A 2XZ1C 2N50A 2Z45A 2KOOA 2LKIA 1K9MQ 5HGLA 2AFDA 1NJIQ 2N5IA 1K30A 3CCMP 5KP8B 1ZMBA 2JO0A 5HGMA 2E1MA 4COPA 2JQ4A 2VLOA 2KG6A 1GXGA 2L6EA 1Q82Q 1M90Q 1JJ2O 4U0CA 7CEIA 3I56P 2GZIA 2KODA 2ROQA 1HY8A 2JAZA 2GDYA 1L0IA 2GZEA 3E2DA 3NTEA 3CCLP 3G71P 2FVAA 1VQ4P 4PH1A 2FVFA 2LIWA 2FVEA 3G0VA 3DS4A 4XFYA 4XFXA 1VKUA 1Z6MA 2LF4A 5KP7B 3CD6P 1VQOP 1DV5A 3DS0A 3CCRP 2FQ1A 3CCVP 3OW2O 2K2QA 2GYKA 1HQBA 1EOQA 1VQPP 3G1IA 4M0IA 3DS1A 1Q86Q 2KGEA 2KOPA 2OTJP 1AUMA 2MVUA
chains in the Genus database with same CATH topology
2LL8A 2K0XA 2K94A 4H2WC 2AF8A 2KGAA 2K93A 2XZ1C 4HKGA 4NEOA 2N50A 2KWLA 2MR8A 2KOOA 2LKIA 2XZ0D 5HV8A 2FAEA 2MR7A 2AFDA 4PXHB 2N5IA 2KGDA 4MRTC 5KP8B 1X3OA 1KLPA 2KR5A 4H2YC 2K0YA 1NQ4A 2JQ4A 2M5RA 2KG8A 2MVVA 1ACPA 4CA3A 2N5HA 2KG6A 4BPGA 2QNWA 2N98A 2FQ2A 2AFEA 2L4BA 2CGQA 1OR5A 3GZLA 3LMOA 2MF4A 5HVCA 2CG5B 2L0QA 2GDWA 1L0HA 2ROQA 1HY8A 3EJEA 2GDYA 3NY7B 2FACA 2MD9A 1L0IA 2LIUA 2KOQA 2KORA 2X2BA 4BPHA 4H2XC 2FADA 3CE7A 2DNWA 2FVAA 2EHTA 3EJBA 2LMLA 2N6ZA 1T8KA 1DNYA 2CNRA 2KOSA 2EHSA 2KGCA 2JGPA 2K92A 5EJDA 2PNGA 2KW2A 2FVFA 2LIWA 2LOLA 2LTEA 2AVAA 2FVEA 2FHSC 3EJDA 5CZDB 2KG9A 3GZMA 1VKUA 5KP7B 1DV5A 2LPKA 2L9FA 2FQ0A 4R0MA 2MY5A 2FQ1A 1AF8A 2JU2A 2K2QA 3RG2A 1HQBA 4BPFA 4DG9A 5KP6B 1F80D 2N6YA 4PWVB 2L22A 2VSQA 4IZ6A 2GDXA 2JU1A 2KGEA 2KOPA 2CQ8A 2MVUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2LL8 A;  2K0X A;  2K94 A;  4H2W C;  2AF8 A;  2KGA A;  2K93 A;  2XZ1 C;  4HKG A;  4NEO A;  2N50 A;  2KWL A;  2MR8 A;  2KOO A;  2LKI A;  2XZ0 D;  5HV8 A;  2FAE A;  2MR7 A;  2AFD A;  4PXH B;  2N5I A;  2KGD A;  4MRT C;  5KP8 B;  1X3O A;  1KLP A;  2KR5 A;  4H2Y C;  2K0Y A;  1NQ4 A;  2JQ4 A;  2M5R A;  2KG8 A;  2MVV A;  1ACP A;  4CA3 A;  2N5H A;  2KG6 A;  4BPG A;  2QNW A;  2N98 A;  2FQ2 A;  2AFE A;  2L4B A;  2CGQ A;  1OR5 A;  3GZL A;  3LMO A;  2MF4 A;  5HVC A;  2CG5 B;  2L0Q A;  2GDW A;  1L0H A;  2ROQ A;  1HY8 A;  3EJE A;  2GDY A;  3NY7 B;  2FAC A;  2MD9 A;  1L0I A;  2LIU A;  2KOQ A;  2KOR A;  2X2B A;  4BPH A;  4H2X C;  2FAD A;  3CE7 A;  2DNW A;  2FVA A;  2EHT A;  3EJB A;  2LML A;  2N6Z A;  1T8K A;  1DNY A;  2CNR A;  2KOS A;  2EHS A;  2KGC A;  2JGP A;  2K92 A;  5EJD A;  2PNG A;  2KW2 A;  2FVF A;  2LIW A;  2LOL A;  2LTE A;  2AVA A;  2FVE A;  2FHS C;  3EJD A;  5CZD B;  2KG9 A;  3GZM A;  1VKU A;  5KP7 B;  1DV5 A;  2LPK A;  2L9F A;  2FQ0 A;  4R0M A;  2MY5 A;  2FQ1 A;  1AF8 A;  2JU2 A;  2K2Q A;  3RG2 A;  1HQB A;  4BPF A;  4DG9 A;  5KP6 B;  1F80 D;  2N6Y A;  4PWV B;  2L22 A;  2VSQ A;  4IZ6 A;  2GDX A;  2JU1 A;  2KGE A;  2KOP A;  2CQ8 A;  2MVU A; 
#chains in the Genus database with same CATH topology
 4U0D A;  2AF8 A;  4HKG A;  2PEI A;  2DGY A;  1VQ9 P;  1D1D A;  4PXH B;  1QVF O;  2KGD A;  4MRT C;  3CXC O;  1KLP A;  3MGE A;  1VQL P;  4H2Y C;  2XV6 A;  1NQ4 A;  2K0D X;  2M8P A;  2XT1 A;  5EW5 E;  2QNW A;  2JBG A;  1BXI A;  2FQ2 A;  2PEJ A;  3G28 A;  2JYL A;  2BUO A;  3DTJ A;  3GZL A;  3LMO A;  1RNI A;  1QRJ A;  4QNB A;  1M6N A;  3CCQ P;  3CC2 P;  2FAC A;  1A43 A;  1VQ8 P;  2LIU A;  2KOR A;  1S72 P;  3EJB A;  1YJW P;  4F37 A;  2CNR A;  1EIA A;  3G6E P;  2JGP A;  2K92 A;  2PNG A;  2LTE A;  3B4Q A;  3EJD A;  4U0B A;  1N8R Q;  5CZD B;  1IMQ A;  2GZG A;  3CMA P;  3Q20 A;  1ZNV A;  1AF8 A;  2JU2 A;  4GR2 A;  2PEO A;  1F80 D;  2N6Y A;  5DCK A;  4PWV B;  1YIJ P;  2VSQ A;  3RG6 C;  2GDX A;  2JU1 A;  1CEI A;  2GZJ A;  5F2K A;  1RO0 A;  2M8N A;  2K94 A;  4H2W C;  2EIA A;  2KGA A;  2NO8 A;  1AYI A;  4XRO A;  2KWL A;  2MR8 A;  2XZ0 D;  1QVG O;  2FAE A;  2MR7 A;  2K5X A;  5HGN A;  2WPT A;  3CCJ P;  3G1G A;  1VQ6 P;  3G4S P;  1YHQ P;  5I4T G;  2PEM A;  2M5R A;  2KG8 A;  2BHV A;  3DS5 A;  4PH0 A;  3CCU P;  4BPG A;  3DS2 A;  2JYG A;  3VRL C;  1KQS O;  1VHN A;  1E0H A;  2L4B A;  2CGQ A;  1OR5 A;  3CME P;  5HVC A;  2CG5 B;  2EG5 A;  2GDW A;  1L0H A;  2GZF A;  3M1M A;  3EJE A;  3U43 A;  2QA4 P;  1KD1 Q;  1RO2 A;  2MD9 A;  5BS1 A;  4BPH A;  2X2B A;  1E6J P;  3I55 P;  2Z44 A;  2EHT A;  2OAR A;  2ERH A;  2PEQ A;  1EMV A;  2EHS A;  2KGC A;  1M74 A;  4U0A A;  2JB0 A;  2LOL A;  3GJN A;  1VQN P;  2AVA A;  4GR6 A;  2M8L A;  2FHS C;  1IMP A;  3LRY A;  3HZQ A;  2QEX P;  2MY5 A;  4UHP B;  1Q81 Q;  3H4E A;  1YJN P;  1K8A Q;  5KP6 B;  1VQK P;  3CC7 P;  1UNK A;  5F2N A;  4XRQ A;  4IZ6 A;  3GKL C;  3DS3 A;  1KC8 Q;  2CQ8 A;  1W2B O;  3G26 A;  2LL8 A;  4COC A;  2P9X A;  1BAJ A;  4U0E A;  1YI2 P;  4WYM A;  5HV8 A;  3WBH A;  2EFJ A;  1X3O A;  1VQ5 P;  2KR5 A;  2VLN A;  2K0Y A;  1FR2 A;  1VQ7 P;  2Z46 A;  2OTL P;  2MVV A;  1ACP A;  4CA3 A;  2XXM A;  2N5H A;  1GPJ A;  5JPA A;  5HGO A;  3H47 A;  2N98 A;  3CCE P;  2AFE A;  2MF4 A;  2L0Q A;  3G29 A;  1IUQ A;  3NY7 B;  2VLQ A;  3CC4 P;  1UJZ A;  2KOQ A;  1A8O A;  4H2X C;  2FAD A;  3H0D A;  3CE7 A;  1YJ9 P;  5BS2 A;  2DNW A;  2LML A;  2N6Z A;  2CWO A;  4IPY A;  1M6E X;  1T8K A;  1DNY A;  5F2O A;  2KOS A;  5EJD A;  2KW2 A;  2PEN A;  1M1K Q;  3CCS P;  1YIT P;  2KG9 A;  3GZM A;  3CPW O;  1GXH A;  2LPK A;  2L9F A;  2FQ0 A;  4R0M A;  1Q7Y Q;  4U0F A;  3RG2 A;  2PEK A;  2ONT A;  3B5I A;  4BPF A;  4DG9 A;  1VQM P;  4XFZ A;  1MZ8 A;  1K73 Q;  2L22 A;  2VLP A;  3DPH A;  2PY8 A;  3P05 A;  3G21 A;  4QKO A;  3HYB A;  2K0X A;  4NEO A;  2K93 A;  2XZ1 C;  2N50 A;  2Z45 A;  2KOO A;  2LKI A;  1K9M Q;  5HGL A;  2AFD A;  1NJI Q;  2N5I A;  1K30 A;  3CCM P;  5KP8 B;  1ZMB A;  2JO0 A;  5HGM A;  2E1M A;  4COP A;  2JQ4 A;  2VLO A;  2KG6 A;  1GXG A;  2L6E A;  1Q82 Q;  1M90 Q;  1JJ2 O;  4U0C A;  7CEI A;  3I56 P;  2GZI A;  2KOD A;  2ROQ A;  1HY8 A;  2JAZ A;  2GDY A;  1L0I A;  2GZE A;  3E2D A;  3NTE A;  3CCL P;  3G71 P;  2FVA A;  1VQ4 P;  4PH1 A;  2FVF A;  2LIW A;  2FVE A;  3G0V A;  3DS4 A;  4XFY A;  4XFX A;  1VKU A;  1Z6M A;  2LF4 A;  5KP7 B;  3CD6 P;  1VQO P;  1DV5 A;  3DS0 A;  3CCR P;  2FQ1 A;  3CCV P;  3OW2 O;  2K2Q A;  2GYK A;  1HQB A;  1EOQ A;  1VQP P;  3G1I A;  4M0I A;  3DS1 A;  1Q86 Q;  2KGE A;  2KOP A;  2OTJ P;  1AUM A;  2MVU A; 
#chains in the Genus database with same CATH homology
 2LL8 A;  2K0X A;  2K94 A;  4H2W C;  2AF8 A;  2KGA A;  2K93 A;  2XZ1 C;  4HKG A;  4NEO A;  2N50 A;  2KWL A;  2MR8 A;  2KOO A;  2LKI A;  2XZ0 D;  5HV8 A;  2FAE A;  2MR7 A;  2AFD A;  4PXH B;  2N5I A;  2KGD A;  4MRT C;  5KP8 B;  1X3O A;  1KLP A;  2KR5 A;  4H2Y C;  2K0Y A;  1NQ4 A;  2JQ4 A;  2M5R A;  2KG8 A;  2MVV A;  1ACP A;  4CA3 A;  2N5H A;  2KG6 A;  4BPG A;  2QNW A;  2N98 A;  2FQ2 A;  2AFE A;  2L4B A;  2CGQ A;  1OR5 A;  3GZL A;  3LMO A;  2MF4 A;  5HVC A;  2CG5 B;  2L0Q A;  2GDW A;  1L0H A;  2ROQ A;  1HY8 A;  3EJE A;  2GDY A;  3NY7 B;  2FAC A;  2MD9 A;  1L0I A;  2LIU A;  2KOQ A;  2KOR A;  2X2B A;  4BPH A;  4H2X C;  2FAD A;  3CE7 A;  2DNW A;  2FVA A;  2EHT A;  3EJB A;  2LML A;  2N6Z A;  1T8K A;  1DNY A;  2CNR A;  2KOS A;  2EHS A;  2KGC A;  2JGP A;  2K92 A;  5EJD A;  2PNG A;  2KW2 A;  2FVF A;  2LIW A;  2LOL A;  2LTE A;  2AVA A;  2FVE A;  2FHS C;  3EJD A;  5CZD B;  2KG9 A;  3GZM A;  1VKU A;  5KP7 B;  1DV5 A;  2LPK A;  2L9F A;  2FQ0 A;  4R0M A;  2MY5 A;  2FQ1 A;  1AF8 A;  2JU2 A;  2K2Q A;  3RG2 A;  1HQB A;  4BPF A;  4DG9 A;  5KP6 B;  1F80 D;  2N6Y A;  4PWV B;  2L22 A;  2VSQ A;  4IZ6 A;  2GDX A;  2JU1 A;  2KGE A;  2KOP A;  2CQ8 A;  2MVU A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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